Rh2AG130200
ERF Family

2OG-Fe(II) oxygenase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
11790395 .. 11794559
4165 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG130200.1

Sequence Viewer

Length: 1317 bp
ATGTCTAATCCGGATGAGAATTCGAGTGGTTTGACACCAAAAAGCAAGGAATTGCAGGAGGCTAGTGATCATGGTGATGGCGATGATGACTATGATGATAACTACGACATGAATTCGCTAGGTAGCTGGAAGGAGGGGACGGATGGGGTATCGGAACCCTACCAGGAAGCTTCTACCAGTGGCCTGGCTTCGAAATCCTCCTCTGTGGGGACTTCAAATACTCGAATGTCGTGGGCCGATATGGCACAGGAAGACGAGCTGGAGGAAGAGGAGGAGTTGAATAAGCGGTTGGTTAGTGTAAATGCTTCTGCTGGTGACTTGAGGATAACAAAGTCTACATTGCCGAGGGAGCAGAGGGAGCACATTAGGTTCACGAAAGTGAAGAGGAAGAAAGATTTTGAATCTCTTGAGAGGTTTAAAGGGAAATATGTTAACGTTGTCGAGGGGCTGGAGCTTCACACTGGTATCTTCAGTGCAGCAGAACAGAAGAGGATAGTTGATTATATTTATGACCTCGAAAAGAAGGGCAGAAATGGTGAATTGAAAGCACGAACTTTTACTGCACCACGAAAGTGGATGAAGGGCAAGGGTCGTGTAACCATTCAGTTTGGTTGTTGCTACAATTATGCAGTGGATAAAAATGGTAATCCACCTGGTATCCTCCAGGATGAAATGGTAGATCCTTTACCCAGTCTTTTTAAGGTTATCATTAGGAGGCTGGTTAGATGGCATGTGCTTCCTCCGACATGTATACCTGATAGTTGCATTGTCAACATATACGAGGAAGGGGACTGTATACCTCCGCACATTGACAACCATGACTTTGTTCGACCATTTTGTACCGTTTCATTTCTTAGTGAGTGCAATATACTTTTTGGAACGAACTTAAAGATTATTGATGCTGGTGAGTTTGAGGGCCCACTTAAAATCCCCTTGCCAGTTGGATCTGTTCTGGTTTTAAATGGAAGAGGCGCTGATGTGGCTAAGCATTGTGTGCCTGCAGTACCTACGAAGCGGATATCAATCACATTTAGAAGAATGGATGAATCCAAGCGGCCAGTTTGGTATGCTCCAGAACCTGATTTGCAAGAGATTCAACCATTGTCCTATGAAGAGGACAACGGTTATAGGTCACATTCTCCTAGAAGTGAACCAGGTACAAGGAGACAGTCAACTAGAAGAGTAGATAACCTAGAAACAAGTGGACTCTCTGAGAGAAGTTACAGCCGCTCAGAGCCTCGCGACTCAACTTGGAGAGGACGCGGATCTGGAAGTAGGTGGAACCGTGGAAGGGGCAGGGGGAATCTGGGGAGCTAG

Protein Analysis

438

Amino Acids

49.34

Weight (kDa)

6.16

Isoelectric Point (pI)

55.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy_2 PF13532 220 - 345 1.6e-10 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1230
AccI GTMKAC 3 cut(s) 335, 751, 796
AccII CGCG 2 cut(s) 1242, 1263
AccIII TCCGGA 1 cut(s) 10
AciI CCGC 6 cut(s) 286, 803, 1015, 1054, 1228, 1263
AclI AACGTT 1 cut(s) 435
AclWI GGATC 3 cut(s) 674, 952, 1273
AcoI YGGCCR 1 cut(s) 1055
AcsI RAATTY 2 cut(s) 19, 112
AcuI CTGAAG 1 cut(s) 454
AfaI GTAC 3 cut(s) 841, 1005, 1159
AfiI CCNNNNNNNGG 2 cut(s) 207, 1291
AflIII ACRYGT 1 cut(s) 746
AgsI TTSAA 5 cut(s) 216, 280, 401, 544, 1097
AjnI CCWGG 5 cut(s) 162, 183, 652, 663, 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 272, 304
AleI CACNNNNGTG 2 cut(s) 377, 571
AluBI AGCT 5 cut(s) 126, 170, 259, 454, 1314
AluI AGCT 5 cut(s) 126, 170, 259, 454, 1314
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 1 cut(s) 1159
AlwI GGATC 3 cut(s) 674, 952, 1273
AlwNI CAGNNNCTG 1 cut(s) 1079
Aor13HI TCCGGA 1 cut(s) 10
AoxI GGCC 4 cut(s) 181, 234, 916, 1055
ApaI GGGCCC 1 cut(s) 920
ApeKI GCWGC 1 cut(s) 476
ApoI RAATTY 2 cut(s) 19, 112
AspLEI GCGC 1 cut(s) 974
AspS9I GGNCC 3 cut(s) 234, 916, 917
AsuHPI GGTGA 4 cut(s) 86, 326, 548, 917
AsuII TTCGAA 1 cut(s) 191
BaeGI GKGCMC 1 cut(s) 920
BaeI ACNNNNGTAYC 2 cut(s) 448, 481
BanII GRGCYC 1 cut(s) 920
BbsI GAAGAC 1 cut(s) 258
Bbv12I GWGCWC 1 cut(s) 363
BbvI GCAGC 1 cut(s) 488
BccI CCATC 3 cut(s) 71, 137, 720
BciT130I CCWGG 5 cut(s) 164, 185, 654, 665, 1155
BciVI GTATCC 1 cut(s) 668
BclI TGATCA 1 cut(s) 67
BcoDI GTCTC 1 cut(s) 1159
BfaI CTAG 6 cut(s) 63, 119, 1143, 1176, 1193, 1315
BfmI CTRYAG 1 cut(s) 999
BfoI RGCGCY 1 cut(s) 975
BfuI GTATCC 1 cut(s) 668
BglI GCCNNNNNGGC 1 cut(s) 242
BisI GCNGC 3 cut(s) 477, 1055, 1228
BlpI GCTNAGC 1 cut(s) 984
BlsI GCNGC 3 cut(s) 478, 1056, 1229
Bme1390I CCNGG 5 cut(s) 164, 185, 654, 665, 1155
BmgT120I GGNCC 3 cut(s) 234, 916, 917
BmiI GGNNCC 3 cut(s) 156, 918, 1283
BmrFI CCNGG 5 cut(s) 164, 185, 654, 665, 1155
BmrI ACTGGG 1 cut(s) 684
BmsI GCATC 1 cut(s) 889
BmuI ACTGGG 1 cut(s) 684
BpiI GAAGAC 1 cut(s) 258
BpmI CTGGAG 4 cut(s) 281, 470, 647, 1056
Bpu1102I GCTNAGC 1 cut(s) 984
Bpu14I TTCGAA 1 cut(s) 191
BpuEI CTTGAG 2 cut(s) 340, 428
BsaBI GATNNNNATC 1 cut(s) 1022
BsaJI CCNNGG 2 cut(s) 344, 1285
BsaWI WCCGGW 1 cut(s) 10
Bsc4I CCNNNNNNNGG 2 cut(s) 207, 1291
Bse1I ACTGG 5 cut(s) 177, 466, 690, 938, 1058
Bse3DI GCAATG 1 cut(s) 338
Bse8I GATNNNNATC 1 cut(s) 1022
BseAI TCCGGA 1 cut(s) 10
BseBI CCWGG 5 cut(s) 164, 185, 654, 665, 1155
BseDI CCNNGG 2 cut(s) 344, 1285
BseGI GGATG 5 cut(s) 19, 148, 582, 673, 1048
BseJI GATNNNNATC 1 cut(s) 1022
BseLI CCNNNNNNNGG 2 cut(s) 207, 1291
BseMI GCAATG 1 cut(s) 338
BseMII CTCAG 2 cut(s) 1203, 1245
BseNI ACTGG 5 cut(s) 177, 466, 690, 938, 1058
BseRI GAGGAG 3 cut(s) 190, 284, 287
BseSI GKGCMC 1 cut(s) 920
BseXI GCAGC 1 cut(s) 488
BsgI GTGCAG 2 cut(s) 495, 546
Bsh1236I CGCG 2 cut(s) 1242, 1263
BshFI GGCC 4 cut(s) 183, 236, 918, 1057
BsiHKAI GWGCWC 1 cut(s) 363
BsiSI CCGG 1 cut(s) 11
BslFI GGGAC 3 cut(s) 151, 223, 803
BslI CCNNNNNNNGG 2 cut(s) 207, 1291
BsmAI GTCTC 1 cut(s) 1159
BsmFI GGGAC 3 cut(s) 151, 223, 803
BsnI GGCC 4 cut(s) 183, 236, 918, 1057
Bsp119I TTCGAA 1 cut(s) 191
Bsp120I GGGCCC 1 cut(s) 916
Bsp1286I GDGCHC 2 cut(s) 363, 920
Bsp13I TCCGGA 1 cut(s) 10
Bsp143I GATC 4 cut(s) 67, 679, 944, 1265
Bsp1720I GCTNAGC 1 cut(s) 984
Bsp68I TCGCGA 1 cut(s) 1242
BspACI CCGC 6 cut(s) 286, 803, 1015, 1054, 1228, 1263
BspANI GGCC 4 cut(s) 183, 236, 918, 1057
BspCNI CTCAG 2 cut(s) 1204, 1244
BspEI TCCGGA 1 cut(s) 10
BspFNI CGCG 2 cut(s) 1242, 1263
BspLI GGNNCC 3 cut(s) 156, 918, 1283
BspMAI CTGCAG 1 cut(s) 1003
BspPI GGATC 3 cut(s) 674, 952, 1273
BspT104I TTCGAA 1 cut(s) 191
BsrBI CCGCTC 1 cut(s) 1230
BsrDI GCAATG 1 cut(s) 338
BsrI ACTGG 5 cut(s) 177, 466, 690, 938, 1058
BssECI CCNNGG 2 cut(s) 344, 1285
BssMI GATC 4 cut(s) 67, 679, 944, 1265
BssNAI GTATAC 2 cut(s) 752, 797
Bst1107I GTATAC 2 cut(s) 752, 797
Bst2UI CCWGG 5 cut(s) 164, 185, 654, 665, 1155
Bst4CI ACNGT 5 cut(s) 794, 844, 1124, 1170, 1286
Bst6I CTCTTC 6 cut(s) 261, 377, 482, 961, 1107, 1174
BstAPI GCANNNNNTGC 1 cut(s) 994
BstBI TTCGAA 1 cut(s) 191
BstC8I GCNNGC 1 cut(s) 999
BstDEI CTNAG 4 cut(s) 854, 984, 1212, 1231
BstDSI CCRYGG 1 cut(s) 1285
BstF5I GGATG 5 cut(s) 19, 148, 582, 673, 1048
BstFNI CGCG 2 cut(s) 1242, 1263
BstH2I RGCGCY 1 cut(s) 975
BstHHI GCGC 1 cut(s) 974
BstKTI GATC 4 cut(s) 70, 682, 947, 1268
BstMAI GTCTC 1 cut(s) 1159
BstMBI GATC 4 cut(s) 67, 679, 944, 1265
BstMWI GCNNNNNNNGC 5 cut(s) 242, 349, 358, 980, 994
BstNI CCWGG 5 cut(s) 164, 185, 654, 665, 1155
BstNSI RCATGY 2 cut(s) 734, 750
BstSCI CCNGG 5 cut(s) 162, 183, 652, 663, 1153
BstSFI CTRYAG 1 cut(s) 999
BstSLI GKGCMC 1 cut(s) 920
BstUI CGCG 2 cut(s) 1242, 1263
BstV1I GCAGC 1 cut(s) 488
BstV2I GAAGAC 1 cut(s) 258
BstX2I RGATCY 3 cut(s) 679, 944, 1265
BstXI CCANNNNNNTGG 2 cut(s) 184, 573
BstYI RGATCY 3 cut(s) 679, 944, 1265
BstZ17I GTATAC 2 cut(s) 752, 797
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 4 cut(s) 183, 236, 918, 1057
BtgI CCRYGG 1 cut(s) 1285
BtgZI GCGATG 1 cut(s) 96
BtsCI GGATG 5 cut(s) 19, 148, 582, 673, 1048
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 4 cut(s) 184, 459, 478, 636
BtuMI TCGCGA 1 cut(s) 1242
Cac8I GCNNGC 1 cut(s) 999
CaiI CAGNNNCTG 1 cut(s) 1079
CfoI GCGC 1 cut(s) 974
Cfr13I GGNCC 3 cut(s) 234, 916, 917
CseI GACGC 1 cut(s) 1269
CsiI ACCWGGT 2 cut(s) 652, 1153
Csp6I GTAC 3 cut(s) 840, 1004, 1158
CviAII CATG 5 cut(s) 71, 109, 731, 747, 818
CviQI GTAC 3 cut(s) 840, 1004, 1158
DdeI CTNAG 4 cut(s) 854, 984, 1212, 1231
DpnI GATC 4 cut(s) 69, 681, 946, 1267
DpnII GATC 4 cut(s) 67, 679, 944, 1265
DraI TTTAAA 2 cut(s) 418, 960
EaeI YGGCCR 1 cut(s) 1055
Eam1104I CTCTTC 6 cut(s) 261, 377, 482, 961, 1107, 1174
EarI CTCTTC 6 cut(s) 261, 377, 482, 961, 1107, 1174
Eco24I GRGCYC 1 cut(s) 920
Eco32I GATATC 1 cut(s) 1020
Eco57I CTGAAG 1 cut(s) 454
EcoO109I RGGNCCY 1 cut(s) 916
EcoRI GAATTC 2 cut(s) 19, 112
EcoRII CCWGG 5 cut(s) 162, 183, 652, 663, 1153
EcoRV GATATC 1 cut(s) 1020
EcoT38I GRGCYC 1 cut(s) 920
FaeI CATG 5 cut(s) 74, 112, 734, 750, 821
FaqI GGGAC 3 cut(s) 151, 223, 803
FatI CATG 5 cut(s) 70, 108, 730, 746, 817
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 3 cut(s) 335, 751, 796
Fnu4HI GCNGC 3 cut(s) 477, 1055, 1228
FokI GGATG 5 cut(s) 26, 155, 589, 680, 1055
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 3 cut(s) 477, 1055, 1228
FspBI CTAG 6 cut(s) 63, 119, 1143, 1176, 1193, 1315
GlaI GCGC 1 cut(s) 973
GluI GCNGC 3 cut(s) 477, 1055, 1228
GsuI CTGGAG 4 cut(s) 281, 470, 647, 1056
HaeII RGCGCY 1 cut(s) 975
HaeIII GGCC 4 cut(s) 183, 236, 918, 1057
HapII CCGG 1 cut(s) 11
HgaI GACGC 1 cut(s) 1269
HhaI GCGC 1 cut(s) 974
Hin1II CATG 5 cut(s) 74, 112, 734, 750, 821
Hin6I GCGC 1 cut(s) 972
HinP1I GCGC 1 cut(s) 972
HincII GTYRAC 3 cut(s) 433, 772, 1173
HindII GTYRAC 3 cut(s) 433, 772, 1173
HindIII AAGCTT 1 cut(s) 168
HinfI GANTC 6 cut(s) 401, 1046, 1093, 1206, 1244, 1303
HpaI GTTAAC 1 cut(s) 433
HpaII CCGG 1 cut(s) 11
HphI GGTGA 4 cut(s) 86, 326, 548, 917
Hpy166II GTNNAC 9 cut(s) 336, 372, 433, 752, 772, 797, 1151, 1173, 1205
Hpy188I TCNGA 4 cut(s) 154, 744, 1213, 1234
Hpy188III TCNNGA 6 cut(s) 11, 373, 407, 1073, 1241, 1269
Hpy8I GTNNAC 9 cut(s) 336, 372, 433, 752, 772, 797, 1151, 1173, 1205
HpyAV CCTTC 5 cut(s) 124, 517, 574, 779, 1284
HpyCH4III ACNGT 5 cut(s) 794, 844, 1124, 1170, 1286
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 8 cut(s) 55, 476, 563, 629, 765, 864, 1001, 1087
HpyF10VI GCNNNNNNNGC 5 cut(s) 242, 349, 358, 980, 994
HpyF3I CTNAG 4 cut(s) 854, 984, 1212, 1231
HpySE526I ACGT 1 cut(s) 435
Hsp92II CATG 5 cut(s) 74, 112, 734, 750, 821
HspAI GCGC 1 cut(s) 972
Kpn2I TCCGGA 1 cut(s) 10
Ksp22I TGATCA 1 cut(s) 67
KspAI GTTAAC 1 cut(s) 433
Kzo9I GATC 4 cut(s) 67, 679, 944, 1265
LmnI GCTCC 5 cut(s) 349, 358, 451, 1075, 1311
Lsp1109I GCAGC 1 cut(s) 488
LweI GCATC 1 cut(s) 889
MabI ACCWGGT 2 cut(s) 652, 1153
MaeI CTAG 6 cut(s) 63, 119, 1143, 1176, 1193, 1315
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 4 cut(s) 314, 595, 1131, 1220
MalI GATC 4 cut(s) 69, 681, 946, 1267
MbiI CCGCTC 1 cut(s) 1230
MboI GATC 4 cut(s) 67, 679, 944, 1265
MflI RGATCY 3 cut(s) 679, 944, 1265
MhlI GDGCHC 2 cut(s) 363, 920
MluCI AATT 5 cut(s) 19, 50, 112, 539, 622
MlyI GAGTC 2 cut(s) 1200, 1238
MmeI TCCRAC 2 cut(s) 767, 922
MroI TCCGGA 1 cut(s) 10
MseI TTAA 6 cut(s) 417, 432, 699, 887, 924, 959
MslI CAYNNNNRTG 3 cut(s) 75, 377, 571
MspI CCGG 1 cut(s) 11
MspR9I CCNGG 5 cut(s) 164, 185, 654, 665, 1155
MvaI CCWGG 5 cut(s) 164, 185, 654, 665, 1155
MvnI CGCG 2 cut(s) 1242, 1263
MwoI GCNNNNNNNGC 5 cut(s) 242, 349, 358, 980, 994
NdeII GATC 4 cut(s) 67, 679, 944, 1265
NlaIII CATG 5 cut(s) 74, 112, 734, 750, 821
NlaIV GGNNCC 3 cut(s) 156, 918, 1283
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 2 cut(s) 314, 1131
NruI TCGCGA 1 cut(s) 1242
NspI RCATGY 2 cut(s) 734, 750
NspV TTCGAA 1 cut(s) 191
OliI CACNNNNGTG 2 cut(s) 377, 571
PciI ACATGT 1 cut(s) 746
PfeI GAWTC 4 cut(s) 401, 1046, 1093, 1303
PfoI TCCNGGA 1 cut(s) 663
PkrI GCNGC 3 cut(s) 478, 1056, 1229
PleI GAGTC 2 cut(s) 1200, 1238
PpsI GAGTC 2 cut(s) 1200, 1238
PscI ACATGT 1 cut(s) 746
Psp1406I AACGTT 1 cut(s) 435
Psp6I CCWGG 5 cut(s) 162, 183, 652, 663, 1153
PspGI CCWGG 5 cut(s) 162, 183, 652, 663, 1153
PspN4I GGNNCC 3 cut(s) 156, 918, 1283
PspOMI GGGCCC 1 cut(s) 916
PspPI GGNCC 3 cut(s) 234, 916, 917
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 1 cut(s) 1079
PsuI RGATCY 3 cut(s) 679, 944, 1265
RruI TCGCGA 1 cut(s) 1242
RsaI GTAC 3 cut(s) 841, 1005, 1159
RsaNI GTAC 3 cut(s) 840, 1004, 1158
RseI CAYNNNNRTG 3 cut(s) 75, 377, 571
SaqAI TTAA 6 cut(s) 417, 432, 699, 887, 924, 959
SatI GCNGC 3 cut(s) 477, 1055, 1228
Sau3AI GATC 4 cut(s) 67, 679, 944, 1265
Sau96I GGNCC 3 cut(s) 234, 916, 917
SchI GAGTC 2 cut(s) 1200, 1238
ScrFI CCNGG 5 cut(s) 164, 185, 654, 665, 1155
SduI GDGCHC 2 cut(s) 363, 920
SexAI ACCWGGT 2 cut(s) 652, 1153
SfaNI GCATC 1 cut(s) 889
SfcI CTRYAG 1 cut(s) 999
SfuI TTCGAA 1 cut(s) 191
SmiMI CAYNNNNRTG 3 cut(s) 75, 377, 571
SmlI CTYRAG 2 cut(s) 319, 407
SmoI CTYRAG 2 cut(s) 319, 407
Sse9I AATT 5 cut(s) 19, 50, 112, 539, 622
SsiI CCGC 6 cut(s) 286, 803, 1015, 1054, 1228, 1263
SspMI CTAG 6 cut(s) 63, 119, 1143, 1176, 1193, 1315
StyD4I CCNGG 5 cut(s) 162, 183, 652, 663, 1153
TaaI ACNGT 5 cut(s) 794, 844, 1124, 1170, 1286
TaiI ACGT 1 cut(s) 438
TaqI TCGA 6 cut(s) 23, 191, 223, 441, 516, 829
TasI AATT 5 cut(s) 19, 50, 112, 539, 622
TauI GCSGC 2 cut(s) 1057, 1230
TfiI GAWTC 4 cut(s) 401, 1046, 1093, 1303
Tru1I TTAA 6 cut(s) 417, 432, 699, 887, 924, 959
Tru9I TTAA 6 cut(s) 417, 432, 699, 887, 924, 959
TscAI CASTG 4 cut(s) 184, 466, 478, 636
TseFI GTSAC 2 cut(s) 314, 1131
TseI GCWGC 1 cut(s) 476
Tsp45I GTSAC 2 cut(s) 314, 1131
TspDTI ATGAA 6 cut(s) 125, 593, 684, 837, 1059, 1125
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 4 cut(s) 184, 466, 478, 636
XapI RAATTY 2 cut(s) 19, 112
XceI RCATGY 2 cut(s) 734, 750
XmiI GTMKAC 3 cut(s) 335, 751, 796
XspI CTAG 6 cut(s) 63, 119, 1143, 1176, 1193, 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.