Rh2BG133300
ERF Family

2OG-Fe(II) oxygenase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
11390495 .. 11394659
4165 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG133300.1

Sequence Viewer

Length: 1143 bp
ATGACTGACGGCAACAACCGAGACGAACCCATCGACCCGTTTCTCGTCGGTTACCAGCCGTCGGAGCTCCGAATCGCGTCGGAGTTCCTCACCACGTGGCTTCCTTTCCTCACCAGAGATCTCTGCCACGGCTGCGCCACCGCTCTCGCCGATCGCGTCCGCTCTCTCGGCCCAGAAGTTACCGGTGATTCTAAGATGTCTAATCCGGATGAGAATTCGAGTGGTTTGACACCAAAAAGCAAGGAATTGCAGGAGGCTAGTGATCATGGTGATGGCGATGATGACTATGATGATAACTACGACATGAATTCGCTAGGTAGCTGGAAGGAGGGGACGGATGGGGTATCGGAACCCTACCAGGAAGCTTCTACCAGTGGCCTGGCTTCGAAATCCTCCTCTGTGGGGACTTCAAATACTCGAATGTCGTGGGCCGATATGGCACAGGAAGACGAGCTGGAGGAAGAGGAGGAGTTGAATAAGCGGTTGGTTAGTGTAAATGCTTCTGCTGGTGACTTGAGGATAACAAAGTCTACATTGCCGAGGGAGCAGAGGGAGCACATTAGGTTCACGAAAGTGAAGAGGAAGAAAGATTTTGAATCTCTTGAGAGGTTTAAAGGGAAATATGTTAACGTTGTCGAGGGGCTGGAGCTTCACACTGGTATCTTCAGTGCAGCAGAACAGAAGAGGATAGTTGATTATATTTATGACCTCGAAAAGAAGGGCAGAAATGGTGAATTGAAAGCACGAACTTTTACTGCACCACGAAAGTGGATGAAGGGCAAGGGTCGTGTAACCATTCAGTTTGGTTGTTGCTACAATTATGCAGTGGATAAAAATGGTAATCCACCTGGTATCCTCCAGGATGAAATGGTAGATCCTTTACCCAGTCTTTTTAAGGTTATCATTAGGAGGCTGGTTAGATGGCATGTGCTTCCTCCGACATGTATACCTGATAGTTGCATTGTCAACATATACGAGGAAGGGGACTGTATACCTCCGCACATTGACAACCATGACTTTGTTCGACCATTTTGTACCGTTTCATTTCTTAGTGAGTGCAATATACTTTTTGGAACGAACTTAAAGATTATTGATGCTGGTGAGTTTGAGGGCCCACTTAAAATCCCCTTGCCAGTTGGGTAA

Protein Analysis

380

Amino Acids

42.58

Weight (kDa)

5.02

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 143, 162
AccI GTMKAC 3 cut(s) 530, 946, 991
AccII CGCG 2 cut(s) 77, 156
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 4 cut(s) 141, 160, 481, 998
AclI AACGTT 1 cut(s) 630
AclWI GGATC 1 cut(s) 869
AcsI RAATTY 2 cut(s) 214, 307
AcuI CTGAAG 1 cut(s) 649
AcvI CACGTG 1 cut(s) 96
AdeI CACNNNGTG 1 cut(s) 96
AfaI GTAC 1 cut(s) 1036
AfiI CCNNNNNNNGG 2 cut(s) 61, 402
AflIII ACRYGT 1 cut(s) 941
AgeI ACCGGT 1 cut(s) 182
AgsI TTSAA 4 cut(s) 411, 475, 596, 739
AjnI CCWGG 4 cut(s) 357, 378, 847, 858
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
AleI CACNNNNGTG 2 cut(s) 572, 766
AluBI AGCT 5 cut(s) 67, 321, 365, 454, 649
AluI AGCT 5 cut(s) 67, 321, 365, 454, 649
Alw21I GWGCWC 2 cut(s) 69, 558
Alw26I GTCTC 1 cut(s) 15
AlwI GGATC 1 cut(s) 869
Aor13HI TCCGGA 1 cut(s) 205
AoxI GGCC 4 cut(s) 169, 376, 429, 1111
ApaI GGGCCC 1 cut(s) 1115
ApeKI GCWGC 2 cut(s) 132, 671
ApoI RAATTY 2 cut(s) 214, 307
AsiGI ACCGGT 1 cut(s) 182
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 4 cut(s) 170, 429, 1111, 1112
AsuHPI GGTGA 7 cut(s) 82, 103, 197, 281, 521, 743, 1112
AsuII TTCGAA 1 cut(s) 386
BaeGI GKGCMC 1 cut(s) 1115
BaeI ACNNNNGTAYC 2 cut(s) 643, 676
BanII GRGCYC 2 cut(s) 69, 1115
BbrPI CACGTG 1 cut(s) 96
BbsI GAAGAC 1 cut(s) 453
Bbv12I GWGCWC 2 cut(s) 69, 558
BbvI GCAGC 2 cut(s) 119, 683
BccI CCATC 4 cut(s) 38, 266, 332, 915
BceAI ACGGC 3 cut(s) 25, 43, 145
BciT130I CCWGG 4 cut(s) 359, 380, 849, 860
BciVI GTATCC 1 cut(s) 863
BclI TGATCA 1 cut(s) 262
BcoDI GTCTC 1 cut(s) 15
BfaI CTAG 2 cut(s) 258, 314
BfuI GTATCC 1 cut(s) 863
BglI GCCNNNNNGGC 1 cut(s) 437
BglII AGATCT 1 cut(s) 118
BisI GCNGC 2 cut(s) 133, 672
BlsI GCNGC 2 cut(s) 134, 673
Bme1390I CCNGG 4 cut(s) 359, 380, 849, 860
BmgT120I GGNCC 4 cut(s) 170, 429, 1111, 1112
BmiI GGNNCC 2 cut(s) 351, 1113
BmrFI CCNGG 4 cut(s) 359, 380, 849, 860
BmrI ACTGGG 1 cut(s) 879
BmsI GCATC 1 cut(s) 1084
BmuI ACTGGG 1 cut(s) 879
BpiI GAAGAC 1 cut(s) 453
BpmI CTGGAG 3 cut(s) 476, 665, 842
Bpu14I TTCGAA 1 cut(s) 386
BpuEI CTTGAG 2 cut(s) 535, 623
BsaAI YACGTR 1 cut(s) 96
BsaJI CCNNGG 2 cut(s) 127, 539
BsaWI WCCGGW 2 cut(s) 182, 205
Bsc4I CCNNNNNNNGG 2 cut(s) 61, 402
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 4 cut(s) 372, 661, 885, 1133
Bse3DI GCAATG 1 cut(s) 533
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 4 cut(s) 359, 380, 849, 860
BseDI CCNNGG 2 cut(s) 127, 539
BseGI GGATG 4 cut(s) 214, 343, 777, 868
BseLI CCNNNNNNNGG 2 cut(s) 61, 402
BseMI GCAATG 1 cut(s) 533
BseNI ACTGG 4 cut(s) 372, 661, 885, 1133
BseRI GAGGAG 3 cut(s) 385, 479, 482
BseSI GKGCMC 1 cut(s) 1115
BseXI GCAGC 2 cut(s) 119, 683
BsgI GTGCAG 2 cut(s) 690, 741
Bsh1236I CGCG 2 cut(s) 77, 156
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 4 cut(s) 171, 378, 431, 1113
BshTI ACCGGT 1 cut(s) 182
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 2 cut(s) 69, 558
BsiSI CCGG 2 cut(s) 183, 206
BslFI GGGAC 3 cut(s) 346, 418, 998
BslI CCNNNNNNNGG 2 cut(s) 61, 402
BsmAI GTCTC 1 cut(s) 15
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 3 cut(s) 346, 418, 998
BsnI GGCC 4 cut(s) 171, 378, 431, 1113
Bsp119I TTCGAA 1 cut(s) 386
Bsp120I GGGCCC 1 cut(s) 1111
Bsp1286I GDGCHC 3 cut(s) 69, 558, 1115
Bsp13I TCCGGA 1 cut(s) 205
Bsp143I GATC 4 cut(s) 118, 151, 262, 874
BspACI CCGC 4 cut(s) 141, 160, 481, 998
BspANI GGCC 4 cut(s) 171, 378, 431, 1113
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 2 cut(s) 77, 156
BspLI GGNNCC 2 cut(s) 351, 1113
BspPI GGATC 1 cut(s) 869
BspT104I TTCGAA 1 cut(s) 386
BsrBI CCGCTC 2 cut(s) 143, 162
BsrDI GCAATG 1 cut(s) 533
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 4 cut(s) 372, 661, 885, 1133
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 2 cut(s) 127, 539
BssMI GATC 4 cut(s) 118, 151, 262, 874
BssNAI GTATAC 2 cut(s) 947, 992
Bst1107I GTATAC 2 cut(s) 947, 992
Bst2UI CCWGG 4 cut(s) 359, 380, 849, 860
Bst4CI ACNGT 2 cut(s) 989, 1039
Bst6I CTCTTC 3 cut(s) 456, 572, 677
BstBAI YACGTR 1 cut(s) 96
BstBI TTCGAA 1 cut(s) 386
BstDEI CTNAG 2 cut(s) 192, 1049
BstDSI CCRYGG 1 cut(s) 127
BstEII GGTNACC 1 cut(s) 50
BstF5I GGATG 4 cut(s) 214, 343, 777, 868
BstFNI CGCG 2 cut(s) 77, 156
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 4 cut(s) 121, 154, 265, 877
BstMAI GTCTC 1 cut(s) 15
BstMBI GATC 4 cut(s) 118, 151, 262, 874
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 6 cut(s) 64, 132, 168, 437, 544, 553
BstNI CCWGG 4 cut(s) 359, 380, 849, 860
BstNSI RCATGY 2 cut(s) 929, 945
BstPI GGTNACC 1 cut(s) 50
BstSCI CCNGG 4 cut(s) 357, 378, 847, 858
BstSLI GKGCMC 1 cut(s) 1115
BstUI CGCG 2 cut(s) 77, 156
BstV1I GCAGC 2 cut(s) 119, 683
BstV2I GAAGAC 1 cut(s) 453
BstX2I RGATCY 2 cut(s) 118, 874
BstXI CCANNNNNNTGG 2 cut(s) 379, 768
BstYI RGATCY 2 cut(s) 118, 874
BstZ17I GTATAC 2 cut(s) 947, 992
BsuI GTATCC 1 cut(s) 863
BsuRI GGCC 4 cut(s) 171, 378, 431, 1113
BtgI CCRYGG 1 cut(s) 127
BtgZI GCGATG 1 cut(s) 291
BtsCI GGATG 4 cut(s) 214, 343, 777, 868
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 4 cut(s) 379, 654, 673, 831
CfoI GCGC 1 cut(s) 137
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 4 cut(s) 170, 429, 1111, 1112
CseI GACGC 2 cut(s) 66, 145
CsiI ACCWGGT 1 cut(s) 847
Csp6I GTAC 1 cut(s) 1035
CspAI ACCGGT 1 cut(s) 182
CviAII CATG 5 cut(s) 266, 304, 926, 942, 1013
CviQI GTAC 1 cut(s) 1035
DdeI CTNAG 2 cut(s) 192, 1049
DpnI GATC 4 cut(s) 120, 153, 264, 876
DpnII GATC 4 cut(s) 118, 151, 262, 874
DraI TTTAAA 1 cut(s) 613
DraIII CACNNNGTG 1 cut(s) 96
Eam1104I CTCTTC 3 cut(s) 456, 572, 677
EarI CTCTTC 3 cut(s) 456, 572, 677
Ecl136II GAGCTC 1 cut(s) 67
Eco24I GRGCYC 2 cut(s) 69, 1115
Eco53kI GAGCTC 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 649
Eco72I CACGTG 1 cut(s) 96
Eco91I GGTNACC 1 cut(s) 50
EcoICRI GAGCTC 1 cut(s) 67
EcoO109I RGGNCCY 1 cut(s) 1111
EcoO65I GGTNACC 1 cut(s) 50
EcoRI GAATTC 2 cut(s) 214, 307
EcoRII CCWGG 4 cut(s) 357, 378, 847, 858
EcoT38I GRGCYC 2 cut(s) 69, 1115
Esp3I CGTCTC 1 cut(s) 15
FaeI CATG 5 cut(s) 269, 307, 929, 945, 1016
FaqI GGGAC 3 cut(s) 346, 418, 998
FatI CATG 5 cut(s) 265, 303, 925, 941, 1012
FbaI TGATCA 1 cut(s) 262
FblI GTMKAC 3 cut(s) 530, 946, 991
Fnu4HI GCNGC 2 cut(s) 133, 672
FokI GGATG 4 cut(s) 221, 350, 784, 875
FriOI GRGCYC 2 cut(s) 69, 1115
Fsp4HI GCNGC 2 cut(s) 133, 672
FspBI CTAG 2 cut(s) 258, 314
GlaI GCGC 1 cut(s) 136
GluI GCNGC 2 cut(s) 133, 672
GsuI CTGGAG 3 cut(s) 476, 665, 842
HaeIII GGCC 4 cut(s) 171, 378, 431, 1113
HapII CCGG 2 cut(s) 183, 206
HgaI GACGC 2 cut(s) 66, 145
HhaI GCGC 1 cut(s) 137
Hin1II CATG 5 cut(s) 269, 307, 929, 945, 1016
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 2 cut(s) 628, 967
HindII GTYRAC 2 cut(s) 628, 967
HindIII AAGCTT 1 cut(s) 363
HinfI GANTC 3 cut(s) 72, 188, 596
HpaI GTTAAC 1 cut(s) 628
HpaII CCGG 2 cut(s) 183, 206
HphI GGTGA 7 cut(s) 82, 103, 197, 281, 521, 743, 1112
Hpy166II GTNNAC 6 cut(s) 531, 567, 628, 947, 967, 992
Hpy188I TCNGA 5 cut(s) 64, 71, 82, 349, 939
Hpy188III TCNNGA 3 cut(s) 206, 568, 602
Hpy8I GTNNAC 6 cut(s) 531, 567, 628, 947, 967, 992
Hpy99I CGWCG 3 cut(s) 50, 64, 82
HpyAV CCTTC 4 cut(s) 319, 712, 769, 974
HpyCH4III ACNGT 2 cut(s) 989, 1039
HpyCH4IV ACGT 2 cut(s) 95, 630
HpyCH4V TGCA 6 cut(s) 250, 671, 758, 824, 960, 1059
HpyF10VI GCNNNNNNNGC 6 cut(s) 64, 132, 168, 437, 544, 553
HpyF3I CTNAG 2 cut(s) 192, 1049
HpySE526I ACGT 2 cut(s) 95, 630
Hsp92II CATG 5 cut(s) 269, 307, 929, 945, 1016
HspAI GCGC 1 cut(s) 135
Kpn2I TCCGGA 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 262
KspAI GTTAAC 1 cut(s) 628
Kzo9I GATC 4 cut(s) 118, 151, 262, 874
LmnI GCTCC 5 cut(s) 64, 72, 544, 553, 646
Lsp1109I GCAGC 2 cut(s) 119, 683
LweI GCATC 1 cut(s) 1084
MabI ACCWGGT 1 cut(s) 847
MaeI CTAG 2 cut(s) 258, 314
MaeII ACGT 2 cut(s) 95, 630
MaeIII GTNAC 4 cut(s) 50, 178, 509, 790
MalI GATC 4 cut(s) 120, 153, 264, 876
MbiI CCGCTC 2 cut(s) 143, 162
MboI GATC 4 cut(s) 118, 151, 262, 874
MboII GAAGA 6 cut(s) 458, 473, 589, 595, 655, 694
MflI RGATCY 2 cut(s) 118, 874
MhlI GDGCHC 3 cut(s) 69, 558, 1115
MluCI AATT 5 cut(s) 214, 245, 307, 734, 817
MmeI TCCRAC 3 cut(s) 42, 60, 962
MroI TCCGGA 1 cut(s) 205
MseI TTAA 5 cut(s) 612, 627, 894, 1082, 1119
MslI CAYNNNNRTG 3 cut(s) 270, 572, 766
MspI CCGG 2 cut(s) 183, 206
MspR9I CCNGG 4 cut(s) 359, 380, 849, 860
MvaI CCWGG 4 cut(s) 359, 380, 849, 860
MvnI CGCG 2 cut(s) 77, 156
MwoI GCNNNNNNNGC 6 cut(s) 64, 132, 168, 437, 544, 553
NdeII GATC 4 cut(s) 118, 151, 262, 874
NlaIII CATG 5 cut(s) 269, 307, 929, 945, 1016
NlaIV GGNNCC 2 cut(s) 351, 1113
NmeAIII GCCGAG 2 cut(s) 147, 564
NmuCI GTSAC 1 cut(s) 509
NspI RCATGY 2 cut(s) 929, 945
NspV TTCGAA 1 cut(s) 386
OliI CACNNNNGTG 2 cut(s) 572, 766
PciI ACATGT 1 cut(s) 941
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 153
PfeI GAWTC 3 cut(s) 72, 188, 596
PfoI TCCNGGA 1 cut(s) 858
PinAI ACCGGT 1 cut(s) 182
PkrI GCNGC 2 cut(s) 134, 673
Ple19I CGATCG 1 cut(s) 154
PmaCI CACGTG 1 cut(s) 96
PmlI CACGTG 1 cut(s) 96
Ppu21I YACGTR 1 cut(s) 96
PscI ACATGT 1 cut(s) 941
Psp124BI GAGCTC 1 cut(s) 69
Psp1406I AACGTT 1 cut(s) 630
Psp6I CCWGG 4 cut(s) 357, 378, 847, 858
PspCI CACGTG 1 cut(s) 96
PspEI GGTNACC 1 cut(s) 50
PspGI CCWGG 4 cut(s) 357, 378, 847, 858
PspN4I GGNNCC 2 cut(s) 351, 1113
PspOMI GGGCCC 1 cut(s) 1111
PspPI GGNCC 4 cut(s) 170, 429, 1111, 1112
PsuI RGATCY 2 cut(s) 118, 874
PvuI CGATCG 1 cut(s) 154
RsaI GTAC 1 cut(s) 1036
RsaNI GTAC 1 cut(s) 1035
RseI CAYNNNNRTG 3 cut(s) 270, 572, 766
SacI GAGCTC 1 cut(s) 69
SaqAI TTAA 5 cut(s) 612, 627, 894, 1082, 1119
SatI GCNGC 2 cut(s) 133, 672
Sau3AI GATC 4 cut(s) 118, 151, 262, 874
Sau96I GGNCC 4 cut(s) 170, 429, 1111, 1112
ScrFI CCNGG 4 cut(s) 359, 380, 849, 860
SduI GDGCHC 3 cut(s) 69, 558, 1115
SexAI ACCWGGT 1 cut(s) 847
SfaNI GCATC 1 cut(s) 1084
SfuI TTCGAA 1 cut(s) 386
SmiMI CAYNNNNRTG 3 cut(s) 270, 572, 766
SmlI CTYRAG 2 cut(s) 514, 602
SmoI CTYRAG 2 cut(s) 514, 602
Sse9I AATT 5 cut(s) 214, 245, 307, 734, 817
SsiI CCGC 4 cut(s) 141, 160, 481, 998
SspMI CTAG 2 cut(s) 258, 314
SstI GAGCTC 1 cut(s) 69
StyD4I CCNGG 4 cut(s) 357, 378, 847, 858
TaaI ACNGT 2 cut(s) 989, 1039
TaiI ACGT 2 cut(s) 98, 633
TaqI TCGA 7 cut(s) 33, 218, 386, 418, 636, 711, 1024
TasI AATT 5 cut(s) 214, 245, 307, 734, 817
TfiI GAWTC 3 cut(s) 72, 188, 596
Tru1I TTAA 5 cut(s) 612, 627, 894, 1082, 1119
Tru9I TTAA 5 cut(s) 612, 627, 894, 1082, 1119
TscAI CASTG 4 cut(s) 379, 661, 673, 831
TseFI GTSAC 1 cut(s) 509
TseI GCWGC 2 cut(s) 132, 671
Tsp45I GTSAC 1 cut(s) 509
TspDTI ATGAA 4 cut(s) 320, 788, 879, 1032
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 4 cut(s) 379, 661, 673, 831
XapI RAATTY 2 cut(s) 214, 307
XceI RCATGY 2 cut(s) 929, 945
XmiI GTMKAC 3 cut(s) 530, 946, 991
XspI CTAG 2 cut(s) 258, 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.