AT2G18100

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0008389
Physical Location & Seq
Forward (+)
7867828 .. 7871801
3974 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G18100.2

Sequence Viewer

Length: 1971 bp
ATGGTGGAAGCTACGTCAAATTTGACGCCGTCGCAGAGATACGCGGCAAGCGCTTTGTTTGCAATCGCGCTTAACCAAGCGCAGATCAGCCAGTCAAAGCCATTGGGAATCCCGGCCACCGGAAGTACCGGAGAGCCAATCAGCAGCGACAGTGATCCTATCTCCGATGAGGCGGATCTCTGGGTCCACGAAGTTTCCGGCCTCCTCCGTCCTGTTCTCAGATGTCTTCAGATTGATTCATCAGCTTGGCATGGCCTTGAAGAGATAGCTGCTTCTACTCAGGCTAAGGATCACATCGGTGCGTTTATCAAGTTACTCTCAGAGGATGTGAGTGATGATGATGATGATTCTAGTGAAATGGTGGAGAAAGAGACCGCCTTAGCTAAAGCTGCTGATGCTATGGATCAAAACATTCGAAGCAGCTCTCTATCTGTGGAATCTAAGATGGAGAAACATGTGGAATTCGAAAACGAATGCCGCGACAAGTATTCTGTTCCCGAGGCACAGTCTGGTGCTGAGGTTAAGGAAACGGAGAGCCACGGGGAGGGTGAAATTAGAGATGGAGGCCACAATCTTGGGATTGTTGAACATGAGAAACCTGTTGGGGAAGTAGCATTGCTTAGCCATGAGAGAAAGATAAATGTTCTTTACGAGCTACTATCTGCTTGCTTGGCAGATAAACATGAGGAGAATGAGATATGTACACGGCGTAGGAAAGGCTATGATGCGCGTCACCATGTTGCTCTGCGGTTACTTGCTACTTGGTTTGACTTTCAGTGGATTAAAATGGAAGCAGTTGAGACAATGTCTGCATGCTCTGCCATGGCATTGCAAAAGTCAAGTGGAAATAAGGAAGAAGAGTCTTTGTCACCAAATAGTGAATGGGCTAAGTGGAAACGTGGAGGCATAGTTGGAGCGGCTGCTTTAACAGGGGGTACATTGATGGCCATCACTGGTGGATTGGCTGCTCCAGCAATAGCTGCAGGGTTCGGTGCATTGGCTCCAACTCTAGGCACAATAGTTCCGGTAATTGGAGCCAGTGGGTTTGCTGCAGCTGCTGAGGCTGCCGGAACTGTTGCTGGTTCTGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACTGGGACGAAGATGGCTAGGAGAACTGGTGACATTGAAGAGTTTGAATTCAAAGCTATTGGAGAAAATCATAATCAAGGACGATTAGCGGTGGAGATCTTAGTTGCTGGCTTTGTTTTAAAGGAAGAAGACTTTGTAAAACCCTGGGAAGGGTTAACTAGCAACCTAGAAAGGTACACGGTGCAATGGGAATCCGAGAATATTATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTTGCTATGGAGTTGATGAGACAAGGTGCAATGCGCACCGTACTAAACTCGCTTTTAGCAGCAATGGTTTGGCCGGCAACAATCCTTGTAGCTGCTGATTTTATAGATAGTAGATGGAGTATTGCTATTGACAGGTCAGACAAAGCAGGGAAGCTTCTTGCTGAAGCGCTTCGAAAAGGGTTGCAAGGAAATAGACCTGTGACTCTGGTTGGTTTTTCGCTTGGTGCACGTGTTGTCTTTAAGTGCCTCCAGACTCTGGCAGAGACTGAAAAGAATGCTGAAATTGTGGAAAGAGTTGTTCTTCTTGGAGCACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGTGGCTGGAAGATTCATTAATGTTTACGCCACAAATGACTGGACCCTCGGAGTTGCATTTCGTGCAAGTCTGTTGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATTGAAGATGTAGATGTAACGGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAACAAATCCTGGAAAGACTCGAACTCGACAATTCTTACCCTGTTTTTCGAAACACTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

656

Amino Acids

70.82

Weight (kDa)

4.99

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 297 - 600 2.3e-84 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1409
AccB7I CCANNNNNTGG 1 cut(s) 1630
AccBSI CCGCTC 1 cut(s) 917
AccI GTMKAC 1 cut(s) 1840
AccII CGCG 4 cut(s) 44, 68, 480, 730
AciI CCGC 7 cut(s) 44, 173, 375, 478, 748, 917, 1217
AclWI GGATC 4 cut(s) 149, 183, 297, 411
AcoI YGGCCR 3 cut(s) 114, 945, 1445
AcsI RAATTY 3 cut(s) 19, 461, 1175
AcuI CTGAAG 2 cut(s) 212, 1557
AcvI CACGTG 1 cut(s) 1604
AcyI GRCGYC 1 cut(s) 26
AfaI GTAC 5 cut(s) 127, 703, 937, 1304, 1416
AfeI AGCGCT 2 cut(s) 52, 1542
AfiI CCNNNNNNNGG 7 cut(s) 119, 544, 1010, 1031, 1277, 1278, 1630
AflIII ACRYGT 2 cut(s) 454, 1603
AgeI ACCGGT 1 cut(s) 1831
AgsI TTSAA 8 cut(s) 260, 587, 1166, 1175, 1180, 1371, 1695, 1853
AjnI CCWGG 2 cut(s) 1271, 1917
AleI CACNNNNGTG 1 cut(s) 297
Alw21I GWGCWC 3 cut(s) 1346, 1603, 1687
Alw26I GTCTC 5 cut(s) 365, 794, 1387, 1631, 1710
Alw44I GTGCAC 1 cut(s) 1599
AlwI GGATC 4 cut(s) 149, 183, 297, 411
AlwNI CAGNNNCTG 3 cut(s) 1058, 1630, 1640
Ama87I CYCGRG 1 cut(s) 497
Aor51HI AGCGCT 2 cut(s) 52, 1542
AoxI GGCC 6 cut(s) 114, 199, 253, 565, 945, 1445
ApaLI GTGCAC 1 cut(s) 1599
ApoI RAATTY 3 cut(s) 19, 461, 1175
AseI ATTAAT 1 cut(s) 1749
AsiGI ACCGGT 1 cut(s) 1831
Asp700I GAANNNNTTC 1 cut(s) 1542
AspLEI GCGC 6 cut(s) 53, 70, 82, 730, 1410, 1543
AspS9I GGNCC 2 cut(s) 184, 1773
AsuC2I CCSGG 2 cut(s) 113, 1845
AsuHPI GGTGA 4 cut(s) 560, 725, 861, 1169
AsuII TTCGAA 4 cut(s) 415, 465, 1546, 1957
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 2 cut(s) 184, 1773
BaeGI GKGCMC 1 cut(s) 1603
BalI TGGCCA 1 cut(s) 947
BanII GRGCYC 1 cut(s) 1128
BbrPI CACGTG 1 cut(s) 1604
BbsI GAAGAC 2 cut(s) 218, 1263
Bbv12I GWGCWC 3 cut(s) 1346, 1603, 1687
BbvCI CCTCAGC 2 cut(s) 516, 1059
BccI CCATC 7 cut(s) 439, 554, 937, 956, 1135, 1482, 1723
BceAI ACGGC 2 cut(s) 13, 722
BciT130I CCWGG 2 cut(s) 1273, 1919
BcnI CCSGG 2 cut(s) 113, 1845
BcoDI GTCTC 5 cut(s) 365, 794, 1387, 1631, 1710
BfaI CTAG 5 cut(s) 351, 1010, 1146, 1287, 1295
BfmI CTRYAG 2 cut(s) 981, 1050
BfoI RGCGCY 2 cut(s) 54, 1544
BglII AGATCT 1 cut(s) 1224
BlpI GCTNAGC 1 cut(s) 620
Bme1390I CCNGG 4 cut(s) 113, 1273, 1845, 1919
Bme18I GGWCC 2 cut(s) 184, 1773
BmeT110I CYCGRG 1 cut(s) 497
BmgT120I GGNCC 2 cut(s) 184, 1773
BmiI GGNNCC 4 cut(s) 185, 1002, 1036, 1775
BmrFI CCNGG 4 cut(s) 113, 1273, 1845, 1919
BmrI ACTGGG 1 cut(s) 1140
BmsI GCATC 3 cut(s) 385, 715, 1109
BmuI ACTGGG 1 cut(s) 1140
BpiI GAAGAC 2 cut(s) 218, 1263
BplI GAGNNNNNCTC 2 cut(s) 1110, 1142
BpmI CTGGAG 3 cut(s) 954, 1137, 1607
Bpu10I CCTNAGC 4 cut(s) 285, 379, 516, 1059
Bpu1102I GCTNAGC 1 cut(s) 620
Bpu14I TTCGAA 4 cut(s) 415, 465, 1546, 1957
BpuMI CCSGG 2 cut(s) 113, 1845
BsaAI YACGTR 1 cut(s) 1604
BsaBI GATNNNNATC 1 cut(s) 947
BsaHI GRCGYC 1 cut(s) 26
BsaI GGTCTC 1 cut(s) 365
BsaJI CCNNGG 8 cut(s) 498, 538, 822, 1271, 1272, 1777, 1810, 1844
BsaWI WCCGGW 4 cut(s) 119, 128, 1024, 1831
BsaXI ACNNNNNCTCC 4 cut(s) 894, 924, 1141, 1171
Bsc4I CCNNNNNNNGG 7 cut(s) 119, 544, 1010, 1031, 1277, 1278, 1630
Bse118I RCCGGY 2 cut(s) 1447, 1831
Bse1I ACTGG 6 cut(s) 91, 958, 1038, 1135, 1159, 1775
Bse3DI GCAATG 5 cut(s) 614, 827, 1319, 1410, 1443
Bse8I GATNNNNATC 1 cut(s) 947
BseBI CCWGG 2 cut(s) 1273, 1919
BseDI CCNNGG 8 cut(s) 498, 538, 822, 1271, 1272, 1777, 1810, 1844
BseGI GGATG 1 cut(s) 331
BseJI GATNNNNATC 1 cut(s) 947
BseLI CCNNNNNNNGG 7 cut(s) 119, 544, 1010, 1031, 1277, 1278, 1630
BseMI GCAATG 5 cut(s) 614, 827, 1319, 1410, 1443
BseMII CTCAG 5 cut(s) 232, 293, 333, 507, 1050
BseNI ACTGG 6 cut(s) 91, 958, 1038, 1135, 1159, 1775
BseRI GAGGAG 2 cut(s) 194, 701
BseSI GKGCMC 1 cut(s) 1603
BseYI CCCAGC 1 cut(s) 1121
Bsh1236I CGCG 4 cut(s) 44, 68, 480, 730
BshFI GGCC 6 cut(s) 116, 201, 255, 567, 947, 1447
BshTI ACCGGT 1 cut(s) 1831
BsiHKAI GWGCWC 3 cut(s) 1346, 1603, 1687
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 9 cut(s) 113, 120, 129, 198, 1025, 1068, 1448, 1832, 1844
BslFI GGGAC 2 cut(s) 1147, 1792
BslI CCNNNNNNNGG 7 cut(s) 119, 544, 1010, 1031, 1277, 1278, 1630
BsmAI GTCTC 5 cut(s) 365, 794, 1387, 1631, 1710
BsmBI CGTCTC 1 cut(s) 1710
BsmFI GGGAC 2 cut(s) 1147, 1792
BsmI GAATGC 2 cut(s) 479, 1654
BsnI GGCC 6 cut(s) 116, 201, 255, 567, 947, 1447
Bso31I GGTCTC 1 cut(s) 365
BsoBI CYCGRG 1 cut(s) 497
Bsp119I TTCGAA 4 cut(s) 415, 465, 1546, 1957
Bsp1286I GDGCHC 4 cut(s) 1128, 1346, 1603, 1687
Bsp1407I TGTACA 1 cut(s) 701
Bsp143I GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
Bsp1720I GCTNAGC 1 cut(s) 620
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 7 cut(s) 44, 173, 375, 478, 748, 917, 1217
BspANI GGCC 6 cut(s) 116, 201, 255, 567, 947, 1447
BspCNI CTCAG 5 cut(s) 231, 292, 332, 508, 1051
BspFNI CGCG 4 cut(s) 44, 68, 480, 730
BspLI GGNNCC 4 cut(s) 185, 1002, 1036, 1775
BspMAI CTGCAG 2 cut(s) 985, 1054
BspPI GGATC 4 cut(s) 149, 183, 297, 411
BspT104I TTCGAA 4 cut(s) 415, 465, 1546, 1957
BspTNI GGTCTC 1 cut(s) 365
BsrBI CCGCTC 1 cut(s) 917
BsrDI GCAATG 5 cut(s) 614, 827, 1319, 1410, 1443
BsrFI RCCGGY 2 cut(s) 1447, 1831
BsrGI TGTACA 1 cut(s) 701
BsrI ACTGG 6 cut(s) 91, 958, 1038, 1135, 1159, 1775
BssAI RCCGGY 2 cut(s) 1447, 1831
BssECI CCNNGG 8 cut(s) 498, 538, 822, 1271, 1272, 1777, 1810, 1844
BssMI GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
BssNAI GTATAC 1 cut(s) 1841
BssNI GRCGYC 1 cut(s) 26
BssT1I CCWWGG 2 cut(s) 822, 1810
Bst1107I GTATAC 1 cut(s) 1841
Bst2UI CCWGG 2 cut(s) 1273, 1919
Bst4CI ACNGT 5 cut(s) 152, 507, 1075, 1309, 1414
Bst6I CTCTTC 3 cut(s) 255, 852, 1161
BstACI GRCGYC 1 cut(s) 26
BstAPI GCANNNNNTGC 3 cut(s) 818, 980, 1793
BstAUI TGTACA 1 cut(s) 701
BstBAI YACGTR 1 cut(s) 1604
BstBI TTCGAA 4 cut(s) 415, 465, 1546, 1957
BstC8I GCNNGC 5 cut(s) 49, 667, 814, 1237, 1449
BstDSI CCRYGG 2 cut(s) 538, 822
BstF5I GGATG 1 cut(s) 331
BstFNI CGCG 4 cut(s) 44, 68, 480, 730
BstH2I RGCGCY 2 cut(s) 54, 1544
BstHHI GCGC 6 cut(s) 53, 70, 82, 730, 1410, 1543
BstKTI GATC 6 cut(s) 87, 157, 178, 292, 406, 1227
BstMAI GTCTC 5 cut(s) 365, 794, 1387, 1631, 1710
BstMBI GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
BstNI CCWGG 2 cut(s) 1273, 1919
BstNSI RCATGY 2 cut(s) 458, 816
BstSCI CCNGG 4 cut(s) 111, 1271, 1843, 1917
BstSFI CTRYAG 2 cut(s) 981, 1050
BstSLI GKGCMC 1 cut(s) 1603
BstUI CGCG 4 cut(s) 44, 68, 480, 730
BstV2I GAAGAC 2 cut(s) 218, 1263
BstX2I RGATCY 2 cut(s) 175, 1224
BstXI CCANNNNNNTGG 1 cut(s) 575
BstYI RGATCY 2 cut(s) 175, 1224
BstZ17I GTATAC 1 cut(s) 1841
BsuRI GGCC 6 cut(s) 116, 201, 255, 567, 947, 1447
BtgI CCRYGG 2 cut(s) 538, 822
BtsCI GGATG 1 cut(s) 331
BtsI GCAGTG 2 cut(s) 1344, 1344
BtsIMutI CAGTG 7 cut(s) 157, 782, 951, 1045, 1128, 1344, 1344
Cac8I GCNNGC 5 cut(s) 49, 667, 814, 1237, 1449
CaiI CAGNNNCTG 3 cut(s) 1058, 1630, 1640
CfoI GCGC 6 cut(s) 53, 70, 82, 730, 1410, 1543
Cfr10I RCCGGY 2 cut(s) 1447, 1831
Cfr13I GGNCC 2 cut(s) 184, 1773
CseI GACGC 2 cut(s) 34, 719
Csp6I GTAC 5 cut(s) 126, 702, 936, 1303, 1415
CspAI ACCGGT 1 cut(s) 1831
CviAII CATG 8 cut(s) 251, 455, 590, 626, 683, 737, 813, 823
CviQI GTAC 5 cut(s) 126, 702, 936, 1303, 1415
DpnI GATC 6 cut(s) 86, 156, 177, 291, 405, 1226
DpnII GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
DraI TTTAAA 1 cut(s) 1248
EaeI YGGCCR 3 cut(s) 114, 945, 1445
Eam1104I CTCTTC 3 cut(s) 255, 852, 1161
EarI CTCTTC 3 cut(s) 255, 852, 1161
EciI GGCGGA 1 cut(s) 188
Eco130I CCWWGG 2 cut(s) 822, 1810
Eco24I GRGCYC 1 cut(s) 1128
Eco31I GGTCTC 1 cut(s) 365
Eco47I GGWCC 2 cut(s) 184, 1773
Eco47III AGCGCT 2 cut(s) 52, 1542
Eco57I CTGAAG 2 cut(s) 212, 1557
Eco72I CACGTG 1 cut(s) 1604
Eco88I CYCGRG 1 cut(s) 497
EcoRI GAATTC 2 cut(s) 461, 1175
EcoRII CCWGG 2 cut(s) 1271, 1917
EcoT14I CCWWGG 2 cut(s) 822, 1810
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 2 cut(s) 822, 1810
Esp3I CGTCTC 1 cut(s) 1710
FaeI CATG 8 cut(s) 254, 458, 593, 629, 686, 740, 816, 826
FaqI GGGAC 2 cut(s) 1147, 1792
FatI CATG 8 cut(s) 250, 454, 589, 625, 682, 736, 812, 822
FblI GTMKAC 1 cut(s) 1840
FokI GGATG 1 cut(s) 338
FriOI GRGCYC 1 cut(s) 1128
FspAI RTGCGCAY 1 cut(s) 1409
FspBI CTAG 5 cut(s) 351, 1010, 1146, 1287, 1295
FspI TGCGCA 1 cut(s) 1409
GlaI GCGC 6 cut(s) 52, 69, 81, 729, 1409, 1542
GsaI CCCAGC 1 cut(s) 1125
GsuI CTGGAG 3 cut(s) 954, 1137, 1607
HaeII RGCGCY 2 cut(s) 54, 1544
HaeIII GGCC 6 cut(s) 116, 201, 255, 567, 947, 1447
HapII CCGG 9 cut(s) 113, 120, 129, 198, 1025, 1068, 1448, 1832, 1844
HgaI GACGC 2 cut(s) 34, 719
HhaI GCGC 6 cut(s) 53, 70, 82, 730, 1410, 1543
Hin1I GRCGYC 1 cut(s) 26
Hin1II CATG 8 cut(s) 254, 458, 593, 629, 686, 740, 816, 826
Hin6I GCGC 6 cut(s) 51, 68, 80, 728, 1408, 1541
HinP1I GCGC 6 cut(s) 51, 68, 80, 728, 1408, 1541
HincII GTYRAC 1 cut(s) 1284
HindII GTYRAC 1 cut(s) 1284
HindIII AAGCTT 1 cut(s) 1526
HpaI GTTAAC 1 cut(s) 1284
HpaII CCGG 9 cut(s) 113, 120, 129, 198, 1025, 1068, 1448, 1832, 1844
HphI GGTGA 4 cut(s) 560, 725, 861, 1169
Hpy166II GTNNAC 7 cut(s) 187, 704, 1284, 1305, 1601, 1756, 1841
Hpy188I TCNGA 7 cut(s) 166, 221, 231, 322, 1324, 1513, 1781
Hpy188III TCNNGA 5 cut(s) 497, 1355, 1371, 1624, 1699
Hpy8I GTNNAC 7 cut(s) 187, 704, 1284, 1305, 1601, 1756, 1841
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 2 cut(s) 1271, 1874
HpyCH4III ACNGT 5 cut(s) 152, 507, 1075, 1309, 1414
HpyCH4IV ACGT 4 cut(s) 14, 898, 1603, 1719
HpySE526I ACGT 4 cut(s) 14, 898, 1603, 1719
Hsp92I GRCGYC 1 cut(s) 26
Hsp92II CATG 8 cut(s) 254, 458, 593, 629, 686, 740, 816, 826
HspAI GCGC 6 cut(s) 51, 68, 80, 728, 1408, 1541
KroI GCCGGC 1 cut(s) 1447
KroNI GCCGGC 1 cut(s) 1449
KspAI GTTAAC 1 cut(s) 1284
Kzo9I GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
LmnI GCTCC 7 cut(s) 914, 973, 1006, 1034, 1109, 1118, 1682
LweI GCATC 3 cut(s) 385, 715, 1109
MaeI CTAG 5 cut(s) 351, 1010, 1146, 1287, 1295
MaeII ACGT 4 cut(s) 14, 898, 1603, 1719
MaeIII GTNAC 8 cut(s) 312, 731, 750, 867, 1157, 1573, 1864, 1883
MalI GATC 6 cut(s) 86, 156, 177, 291, 405, 1226
MbiI CCGCTC 1 cut(s) 917
MboI GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
MflI RGATCY 2 cut(s) 175, 1224
MhlI GDGCHC 4 cut(s) 1128, 1346, 1603, 1687
MlsI TGGCCA 1 cut(s) 947
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 4 cut(s) 869, 1570, 1621, 1920
MmeI TCCRAC 3 cut(s) 892, 1028, 1852
Mox20I TGGCCA 1 cut(s) 947
MroNI GCCGGC 1 cut(s) 1447
MroXI GAANNNNTTC 1 cut(s) 1542
MscI TGGCCA 1 cut(s) 947
MseI TTAA 8 cut(s) 72, 522, 783, 926, 1247, 1283, 1614, 1749
MslI CAYNNNNRTG 1 cut(s) 297
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 1 cut(s) 1055
MspI CCGG 9 cut(s) 113, 120, 129, 198, 1025, 1068, 1448, 1832, 1844
MspR9I CCNGG 4 cut(s) 113, 1273, 1845, 1919
Mva1269I GAATGC 2 cut(s) 479, 1654
MvaI CCWGG 2 cut(s) 1273, 1919
MvnI CGCG 4 cut(s) 44, 68, 480, 730
NaeI GCCGGC 1 cut(s) 1449
NciI CCSGG 2 cut(s) 113, 1845
NcoI CCATGG 1 cut(s) 822
NdeII GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
NgoMIV GCCGGC 1 cut(s) 1447
NlaIII CATG 8 cut(s) 254, 458, 593, 629, 686, 740, 816, 826
NlaIV GGNNCC 4 cut(s) 185, 1002, 1036, 1775
NmuCI GTSAC 5 cut(s) 731, 867, 1157, 1573, 1883
NsbI TGCGCA 1 cut(s) 1409
NspI RCATGY 2 cut(s) 458, 816
NspV TTCGAA 4 cut(s) 415, 465, 1546, 1957
OliI CACNNNNGTG 1 cut(s) 297
PaeI GCATGC 1 cut(s) 816
PasI CCCWGGG 1 cut(s) 1272
PciI ACATGT 1 cut(s) 454
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PctI GAATGC 2 cut(s) 479, 1654
PdiI GCCGGC 1 cut(s) 1449
PdmI GAANNNNTTC 1 cut(s) 1542
PfeI GAWTC 7 cut(s) 108, 236, 347, 437, 1319, 1743, 1824
PflFI GACNNNGTC 2 cut(s) 28, 805
PflMI CCANNNNNTGG 1 cut(s) 1630
PfoI TCCNGGA 1 cut(s) 1917
PinAI ACCGGT 1 cut(s) 1831
PleI GAGTC 4 cut(s) 868, 1570, 1621, 1920
PmaCI CACGTG 1 cut(s) 1604
PmlI CACGTG 1 cut(s) 1604
PpsI GAGTC 4 cut(s) 868, 1570, 1621, 1920
Ppu21I YACGTR 1 cut(s) 1604
PscI ACATGT 1 cut(s) 454
PshBI ATTAAT 1 cut(s) 1749
Psp6I CCWGG 2 cut(s) 1271, 1917
PspCI CACGTG 1 cut(s) 1604
PspFI CCCAGC 1 cut(s) 1121
PspGI CCWGG 2 cut(s) 1271, 1917
PspN4I GGNNCC 4 cut(s) 185, 1002, 1036, 1775
PspPI GGNCC 2 cut(s) 184, 1773
PstI CTGCAG 2 cut(s) 985, 1054
PstNI CAGNNNCTG 3 cut(s) 1058, 1630, 1640
PsuI RGATCY 2 cut(s) 175, 1224
PsyI GACNNNGTC 2 cut(s) 28, 805
PvuII CAGCTG 1 cut(s) 1055
RsaI GTAC 5 cut(s) 127, 703, 937, 1304, 1416
RsaNI GTAC 5 cut(s) 126, 702, 936, 1303, 1415
RseI CAYNNNNRTG 1 cut(s) 297
SaqAI TTAA 8 cut(s) 72, 522, 783, 926, 1247, 1283, 1614, 1749
Sau3AI GATC 6 cut(s) 84, 154, 175, 289, 403, 1224
Sau96I GGNCC 2 cut(s) 184, 1773
SchI GAGTC 4 cut(s) 869, 1570, 1621, 1920
ScrFI CCNGG 4 cut(s) 113, 1273, 1845, 1919
SduI GDGCHC 4 cut(s) 1128, 1346, 1603, 1687
SfaNI GCATC 3 cut(s) 385, 715, 1109
SfcI CTRYAG 2 cut(s) 981, 1050
SfuI TTCGAA 4 cut(s) 415, 465, 1546, 1957
SinI GGWCC 2 cut(s) 184, 1773
SmiMI CAYNNNNRTG 1 cut(s) 297
SphI GCATGC 1 cut(s) 816
SsiI CCGC 7 cut(s) 44, 173, 375, 478, 748, 917, 1217
SspI AATATT 1 cut(s) 1330
SspMI CTAG 5 cut(s) 351, 1010, 1146, 1287, 1295
StyD4I CCNGG 4 cut(s) 111, 1271, 1843, 1917
StyI CCWWGG 2 cut(s) 822, 1810
TaaI ACNGT 5 cut(s) 152, 507, 1075, 1309, 1414
TaiI ACGT 4 cut(s) 17, 901, 1606, 1722
TaqI TCGA 6 cut(s) 415, 465, 1546, 1929, 1935, 1957
TatI WGTACW 1 cut(s) 701
TauI GCSGC 3 cut(s) 47, 480, 920
TfiI GAWTC 7 cut(s) 108, 236, 347, 437, 1319, 1743, 1824
Tru1I TTAA 8 cut(s) 72, 522, 783, 926, 1247, 1283, 1614, 1749
Tru9I TTAA 8 cut(s) 72, 522, 783, 926, 1247, 1283, 1614, 1749
TscAI CASTG 7 cut(s) 157, 782, 958, 1045, 1135, 1344, 1351
TseFI GTSAC 5 cut(s) 731, 867, 1157, 1573, 1883
Tsp45I GTSAC 5 cut(s) 731, 867, 1157, 1573, 1883
TspDTI ATGAA 2 cut(s) 228, 1735
TspGWI ACGGA 3 cut(s) 197, 545, 1883
TspRI CASTG 7 cut(s) 157, 782, 958, 1045, 1135, 1344, 1351
Tth111I GACNNNGTC 2 cut(s) 28, 805
Van91I CCANNNNNTGG 1 cut(s) 1630
VneI GTGCAC 1 cut(s) 1599
VpaK11BI GGWCC 2 cut(s) 184, 1773
VspI ATTAAT 1 cut(s) 1749
XapI RAATTY 3 cut(s) 19, 461, 1175
XceI RCATGY 2 cut(s) 458, 816
XcmI CCANNNNNNNNNTGG 2 cut(s) 879, 1817
XmiI GTMKAC 1 cut(s) 1840
XmnI GAANNNNTTC 1 cut(s) 1542
XspI CTAG 5 cut(s) 351, 1010, 1146, 1287, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.