ubiquitin modification-dependent histone binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18328 |
| fragaria_vesca | FvH4_1g13110 |
| malus_domestica | MD02G1145800.v1.1 MD15G1260000.v1.1 |
| prunus_persica | Prupe.7G156100_v2.0.a1 |
| pyrus_communis | pycom02g11530 |
| rosa_chinensis | RchiOBHm_Chr2g0101281 |
| rosa_multiflora | Rmu_sc0006314.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00141440 |
| rosa_rugosa | Rorug02G0099400 Rorug02G0099500 |
| rosa_samantha | Rh2AG145700 Rh2BG151100 Rh2CG151500 Rh2DG151200 |
| rosa_wichuraiana | Rw2G011370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 216 |
| AccB1I | GGYRCC | 1 cut(s) | 216 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AcuI | CTGAAG | 1 cut(s) | 159 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 15 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 190 |
| AluBI | AGCT | 1 cut(s) | 38 |
| AluI | AGCT | 1 cut(s) | 38 |
| Alw21I | GWGCWC | 1 cut(s) | 23 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 38, 70 |
| Asp718I | GGTACC | 1 cut(s) | 216 |
| AspA2I | CCTAGG | 1 cut(s) | 212 |
| AsuII | TTCGAA | 1 cut(s) | 57 |
| AvrII | CCTAGG | 1 cut(s) | 212 |
| AxyI | CCTNAGG | 1 cut(s) | 170 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 200, 233 |
| BanI | GGYRCC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 1 cut(s) | 23 |
| BfaI | CTAG | 3 cut(s) | 9, 39, 213 |
| BlnI | CCTAGG | 1 cut(s) | 212 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 190 |
| BmiI | GGNNCC | 1 cut(s) | 218 |
| Bpu14I | TTCGAA | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 212 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bse21I | CCTNAGG | 1 cut(s) | 170 |
| BseDI | CCNNGG | 1 cut(s) | 212 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BshNI | GGYRCC | 1 cut(s) | 216 |
| BsiHKAI | GWGCWC | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bsp119I | TTCGAA | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 23 |
| BspLI | GGNNCC | 1 cut(s) | 218 |
| BspT104I | TTCGAA | 1 cut(s) | 57 |
| BspT107I | GGYRCC | 1 cut(s) | 216 |
| BssECI | CCNNGG | 1 cut(s) | 212 |
| BssT1I | CCWWGG | 1 cut(s) | 212 |
| Bst4CI | ACNGT | 2 cut(s) | 98, 221 |
| BstBI | TTCGAA | 1 cut(s) | 57 |
| BstDEI | CTNAG | 1 cut(s) | 170 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| Bsu36I | CCTNAGG | 1 cut(s) | 170 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| CseI | GACGC | 1 cut(s) | 207 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CviAII | CATG | 1 cut(s) | 30 |
| CviJI | RGCY | 2 cut(s) | 5, 38 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 38 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DdeI | CTNAG | 1 cut(s) | 170 |
| DriI | GACNNNNNGTC | 1 cut(s) | 190 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 1 cut(s) | 212 |
| Eco57I | CTGAAG | 1 cut(s) | 159 |
| Eco81I | CCTNAGG | 1 cut(s) | 170 |
| EcoT14I | CCWWGG | 1 cut(s) | 212 |
| ErhI | CCWWGG | 1 cut(s) | 212 |
| FaeI | CATG | 1 cut(s) | 33 |
| FaiI | YATR | 2 cut(s) | 31, 159 |
| FatI | CATG | 1 cut(s) | 29 |
| FokI | GGATG | 1 cut(s) | 188 |
| FspBI | CTAG | 3 cut(s) | 9, 39, 213 |
| HgaI | GACGC | 1 cut(s) | 207 |
| Hin1II | CATG | 1 cut(s) | 33 |
| HinfI | GANTC | 1 cut(s) | 191 |
| Hpy188III | TCNNGA | 2 cut(s) | 92, 195 |
| HpyCH4III | ACNGT | 2 cut(s) | 98, 221 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpyF3I | CTNAG | 1 cut(s) | 170 |
| Hsp92II | CATG | 1 cut(s) | 33 |
| KpnI | GGTACC | 1 cut(s) | 220 |
| LmnI | GCTCC | 1 cut(s) | 171 |
| LpnPI | CCDG | 2 cut(s) | 105, 180 |
| MaeI | CTAG | 3 cut(s) | 9, 39, 213 |
| MaeIII | GTNAC | 1 cut(s) | 221 |
| MboII | GAAGA | 1 cut(s) | 152 |
| MhlI | GDGCHC | 1 cut(s) | 23 |
| MluCI | AATT | 5 cut(s) | 53, 74, 108, 161, 229 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MnlI | CCTC | 2 cut(s) | 34, 37 |
| NlaIII | CATG | 1 cut(s) | 33 |
| NlaIV | GGNNCC | 1 cut(s) | 218 |
| NspV | TTCGAA | 1 cut(s) | 57 |
| PleI | GAGTC | 1 cut(s) | 199 |
| PpsI | GAGTC | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 1 cut(s) | 218 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| SchI | GAGTC | 1 cut(s) | 200 |
| SduI | GDGCHC | 1 cut(s) | 23 |
| SetI | ASST | 4 cut(s) | 26, 40, 214, 218 |
| SfuI | TTCGAA | 1 cut(s) | 57 |
| SgeI | CNNG | 9 cut(s) | 21, 42, 51, 61, 94, 104, 126, 207, 225 |
| Sse9I | AATT | 5 cut(s) | 53, 74, 108, 161, 229 |
| SspMI | CTAG | 3 cut(s) | 9, 39, 213 |
| StyI | CCWWGG | 1 cut(s) | 212 |
| TaaI | ACNGT | 2 cut(s) | 98, 221 |
| TaqI | TCGA | 2 cut(s) | 57, 78 |
| TasI | AATT | 5 cut(s) | 53, 74, 108, 161, 229 |
| TspDTI | ATGAA | 1 cut(s) | 174 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XmaJI | CCTAGG | 1 cut(s) | 212 |
| XspI | CTAG | 3 cut(s) | 9, 39, 213 |