AT2G23250

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0011977
Physical Location & Seq
Reverse (-)
9897809 .. 9899125
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G23250.1

Sequence Viewer

Length: 1317 bp
ATGGTAGCATTAGCATTCCAAGGTCATCTCAATCCAATGCTCAAATTCGCAAAACATCTCGCACGAACCAATCTACACTTCACTCTCGCCACCACTGAGCAAGCCCGTGACCTCCTCTCTTCCACCGCTGACGAACCTCATAGACCGGTGGACCTCGCTTTCTTCTCAGACGGTCTACCTAAAGACGATCCAAGAGATCCCGACACTCTCGCAAAGTCATTGAAAAAAGATGGAGCCAAGAACTTGTCAAAAATCATCGAAGAAAAGAGATTTGATTGCATCATCTCTGTGCCTTTTACTCCCTGGGTTCCAGCTGTTGCAGCTGCACATAACATTCCTTGTGCAATCCTCTGGATCCAAGCTTGTGGAGCTTTTTCTGTTTATTACCGTTATTACATGAAGACAAATCCTTTCCCCGACCTTGAAGATCTGAATCAAACAGTGGAGTTACCAGCTTTACCATTGTTGGAAGTCCGAGATCTCCCGTCATTGATGTTACCTTCTCAAGGAGCTAATGTCAATACCCTAATGGCGGAATTTGCAGATTGTTTGAAAGATGTGAAATGGGTTTTGGTTAACTCGTTTTACGAACTCGAATCAGAGATCATCGAGTCTATGTCTGATTTAAAACCTATAATCCCAATTGGTCCTCTTGTTTCTCCATTCCTGTTGGGAAATGATGAAGAAAAAACCCTAGATATGTGGAAAGTTGATGATTATTGTATGGAGTGGCTTGACAAGCAAGCTAGGTCTTCAGTTGTTTACATATCTTTCGGAAGCATACTCAAATCATTGGAGAATCAAGTTGAGACCATAGCAACGGCATTAAAAAACAGAGGAGTTCCATTTCTTTGGGTGATACGGCCGAAGGAGAAAGGCGAAAACGTCCAGGTTTTGCAGGAGATGGTTAAAGAAGGTAAAGGGGTTGTAACTGAATGGGGTCAACAAGAAAAGATATTGAGCCACATGGCGATTTCTTGCTTCATCACGCATTGTGGATGGAACTCGACGATCGAGACGGTGGTGACTGGTGTTCCCGTGGTGGCGTATCCGACTTGGATAGATCAGCCGCTTGATGCGAGACTGCTTGTGGATGTGTTTGGAATCGGAGTAAGGATGAAGAACGACGCTATCGATGGAGAGCTTAAGGTTGCAGAGGTGGAGAGATGCATTGAGGCCGTGACAGAGGGACCTGCCGCCGCGGATATGAGGAGGAGAGCGACGGAGCTGAAGCACGCCGCAAGATCGGCGATGTCACCTGGTGGATCTTCCGCTCAGAATTTAGACTCGTTCATTAGTGATATCCCAATCACTTGA

Protein Analysis

438

Amino Acids

48.72

Weight (kDa)

5.04

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 250 - 374 1.3e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011977)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23210 AT2G23250 AT2G23260
fragaria_vesca FvH4_1g16840
malus_domestica MD02G1179400.v1.1
prunus_persica Prupe.6G228400_v2.0.a1
pyrus_communis pycom02g14550
rosa_chinensis RchiOBHm_Chr2g0106741
rosa_laevigata RLG00000017537
rosa_multiflora Rmu_sc0004000.1_g000018 Rmu_sc0004000.1_g000020
rosa_roxburghii Rroxscaffold_2G00136810
rosa_rugosa Rorug02G0138400
rosa_samantha Rh2AG189300 Rh2BG200700 Rh2CG194300 Rh2DG195500
rosa_wichuraiana Rw2G014890 Rw2G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1201
AccBSI CCGCTC 1 cut(s) 1274
AccI GTMKAC 1 cut(s) 175
AccII CGCG 1 cut(s) 1202
AciI CCGC 8 cut(s) 126, 533, 1070, 1197, 1200, 1202, 1239, 1272
AclWI GGATC 5 cut(s) 182, 191, 349, 362, 1273
AcoI YGGCCR 1 cut(s) 863
AcsI RAATTY 3 cut(s) 44, 536, 1279
AcuI CTGAAG 2 cut(s) 738, 1250
AdeI CACNNNGTG 1 cut(s) 1262
AfiI CCNNNNNNNGG 2 cut(s) 506, 532
AflII CTTAAG 1 cut(s) 1145
AgeI ACCGGT 1 cut(s) 145
AgsI TTSAA 3 cut(s) 223, 425, 553
AjnI CCWGG 3 cut(s) 302, 888, 1258
AjuI GAANNNNNNNTTGG 4 cut(s) 62, 94, 554, 586
AluBI AGCT 9 cut(s) 314, 323, 362, 371, 455, 512, 746, 1144, 1228
AluI AGCT 9 cut(s) 314, 323, 362, 371, 455, 512, 746, 1144, 1228
Alw26I GTCTC 3 cut(s) 803, 1010, 1075
AlwI GGATC 5 cut(s) 182, 191, 349, 362, 1273
AoxI GGCC 2 cut(s) 863, 1176
ApeKI GCWGC 2 cut(s) 320, 323
ApoI RAATTY 3 cut(s) 44, 536, 1279
AsiGI ACCGGT 1 cut(s) 145
AspS9I GGNCC 3 cut(s) 151, 647, 1190
AsuHPI GGTGA 3 cut(s) 868, 1036, 1248
AvaII GGWCC 3 cut(s) 151, 647, 1190
BamHI GGATCC 1 cut(s) 354
BbsI GAAGAC 2 cut(s) 407, 744
BbvI GCAGC 2 cut(s) 310, 332
BccI CCATC 4 cut(s) 224, 898, 993, 1130
BceAI ACGGC 3 cut(s) 837, 878, 1163
BciT130I CCWGG 3 cut(s) 304, 890, 1260
BciVI GTATCC 1 cut(s) 1059
BcoDI GTCTC 3 cut(s) 803, 1010, 1075
BfaI CTAG 2 cut(s) 695, 747
BfrI CTTAAG 1 cut(s) 1145
BfuAI ACCTGC 1 cut(s) 1201
BfuI GTATCC 1 cut(s) 1059
BglII AGATCT 2 cut(s) 427, 478
BisI GCNGC 6 cut(s) 321, 324, 1070, 1197, 1200, 1239
BlsI GCNGC 6 cut(s) 322, 325, 1071, 1198, 1201, 1240
Bme1390I CCNGG 3 cut(s) 304, 890, 1260
Bme18I GGWCC 3 cut(s) 151, 647, 1190
BmgT120I GGNCC 3 cut(s) 151, 647, 1190
BmiI GGNNCC 4 cut(s) 235, 309, 356, 1191
BmrFI CCNGG 3 cut(s) 304, 890, 1260
BmsI GCATC 3 cut(s) 288, 1066, 1157
BpiI GAAGAC 2 cut(s) 407, 744
BpuEI CTTGAG 1 cut(s) 489
Bsa29I ATCGAT 1 cut(s) 1134
BsaBI GATNNNNATC 1 cut(s) 432
BsaI GGTCTC 1 cut(s) 803
BsaJI CCNNGG 5 cut(s) 19, 302, 303, 1038, 1200
BsaWI WCCGGW 1 cut(s) 145
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 2 cut(s) 506, 532
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 1033
Bse8I GATNNNNATC 1 cut(s) 432
BseBI CCWGG 3 cut(s) 304, 890, 1260
BseCI ATCGAT 1 cut(s) 1134
BseDI CCNNGG 5 cut(s) 19, 302, 303, 1038, 1200
BseGI GGATG 3 cut(s) 1004, 1099, 1122
BseJI GATNNNNATC 1 cut(s) 432
BseLI CCNNNNNNNGG 2 cut(s) 506, 532
BseMII CTCAG 3 cut(s) 87, 180, 1289
BseNI ACTGG 1 cut(s) 1033
BseRI GAGGAG 4 cut(s) 104, 852, 1225, 1228
BseX3I CGGCCG 1 cut(s) 863
BseXI GCAGC 2 cut(s) 310, 332
BsgI GTGCAG 1 cut(s) 309
Bsh1236I CGCG 1 cut(s) 1202
Bsh1285I CGRYCG 2 cut(s) 866, 1014
BshFI GGCC 2 cut(s) 865, 1178
BshTI ACCGGT 1 cut(s) 145
BshVI ATCGAT 1 cut(s) 1134
BsiEI CGRYCG 2 cut(s) 866, 1014
BsiSI CCGG 1 cut(s) 146
BslFI GGGAC 1 cut(s) 1203
BslI CCNNNNNNNGG 2 cut(s) 506, 532
BsmAI GTCTC 3 cut(s) 803, 1010, 1075
BsmBI CGTCTC 1 cut(s) 1010
BsmFI GGGAC 1 cut(s) 1203
BsmI GAATGC 1 cut(s) 14
BsnI GGCC 2 cut(s) 865, 1178
Bso31I GGTCTC 1 cut(s) 803
BspACI CCGC 8 cut(s) 126, 533, 1070, 1197, 1200, 1202, 1239, 1272
BspANI GGCC 2 cut(s) 865, 1178
BspCNI CTCAG 3 cut(s) 88, 179, 1288
BspDI ATCGAT 1 cut(s) 1134
BspFNI CGCG 1 cut(s) 1202
BspLI GGNNCC 4 cut(s) 235, 309, 356, 1191
BspMI ACCTGC 1 cut(s) 1201
BspPI GGATC 5 cut(s) 182, 191, 349, 362, 1273
BspTI CTTAAG 1 cut(s) 1145
BspTNI GGTCTC 1 cut(s) 803
BsrBI CCGCTC 1 cut(s) 1274
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 1 cut(s) 1033
BssAI RCCGGY 1 cut(s) 145
BssECI CCNNGG 5 cut(s) 19, 302, 303, 1038, 1200
BssT1I CCWWGG 1 cut(s) 19
Bst2UI CCWGG 3 cut(s) 304, 890, 1260
Bst4CI ACNGT 4 cut(s) 173, 389, 442, 1021
Bst6I CTCTTC 1 cut(s) 124
BstAFI CTTAAG 1 cut(s) 1145
BstC8I GCNNGC 3 cut(s) 102, 744, 1236
BstDEI CTNAG 3 cut(s) 96, 166, 1275
BstDSI CCRYGG 2 cut(s) 1038, 1200
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 3 cut(s) 1004, 1099, 1122
BstFNI CGCG 1 cut(s) 1202
BstMAI GTCTC 3 cut(s) 803, 1010, 1075
BstMCI CGRYCG 2 cut(s) 866, 1014
BstMWI GCNNNNNNNGC 5 cut(s) 320, 368, 539, 739, 1247
BstNI CCWGG 3 cut(s) 304, 890, 1260
BstSCI CCNGG 3 cut(s) 302, 888, 1258
BstUI CGCG 1 cut(s) 1202
BstV1I GCAGC 2 cut(s) 310, 332
BstV2I GAAGAC 2 cut(s) 407, 744
BstX2I RGATCY 5 cut(s) 196, 354, 427, 478, 1265
BstXI CCANNNNNNTGG 2 cut(s) 365, 852
BstYI RGATCY 5 cut(s) 196, 354, 427, 478, 1265
BstZI CGGCCG 1 cut(s) 863
Bsu15I ATCGAT 1 cut(s) 1134
BsuI GTATCC 1 cut(s) 1059
BsuRI GGCC 2 cut(s) 865, 1178
BsuTUI ATCGAT 1 cut(s) 1134
BtgI CCRYGG 2 cut(s) 1038, 1200
BtgZI GCGATG 1 cut(s) 1265
BtsCI GGATG 3 cut(s) 1004, 1099, 1122
BtsIMutI CAGTG 2 cut(s) 93, 447
BveI ACCTGC 1 cut(s) 1201
Cac8I GCNNGC 3 cut(s) 102, 744, 1236
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 3 cut(s) 151, 647, 1190
Cfr42I CCGCGG 1 cut(s) 1203
ClaI ATCGAT 1 cut(s) 1134
CseI GACGC 1 cut(s) 1136
CsiI ACCWGGT 1 cut(s) 1258
CspAI ACCGGT 1 cut(s) 145
CviAII CATG 2 cut(s) 397, 967
DdeI CTNAG 3 cut(s) 96, 166, 1275
DraI TTTAAA 1 cut(s) 627
DraIII CACNNNGTG 1 cut(s) 1262
EaeI YGGCCR 1 cut(s) 863
EagI CGGCCG 1 cut(s) 863
Eam1104I CTCTTC 1 cut(s) 124
EarI CTCTTC 1 cut(s) 124
EciI GGCGGA 1 cut(s) 548
EclXI CGGCCG 1 cut(s) 863
Eco130I CCWWGG 1 cut(s) 19
Eco31I GGTCTC 1 cut(s) 803
Eco32I GATATC 1 cut(s) 1303
Eco47I GGWCC 3 cut(s) 151, 647, 1190
Eco52I CGGCCG 1 cut(s) 863
Eco57I CTGAAG 2 cut(s) 738, 1250
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoO109I RGGNCCY 1 cut(s) 1190
EcoRII CCWGG 3 cut(s) 302, 888, 1258
EcoRV GATATC 1 cut(s) 1303
EcoT14I CCWWGG 1 cut(s) 19
EcoT22I ATGCAT 1 cut(s) 1172
ErhI CCWWGG 1 cut(s) 19
Esp3I CGTCTC 1 cut(s) 1010
FaeI CATG 2 cut(s) 400, 970
FaqI GGGAC 1 cut(s) 1203
FatI CATG 2 cut(s) 396, 966
FblI GTMKAC 1 cut(s) 175
Fnu4HI GCNGC 6 cut(s) 321, 324, 1070, 1197, 1200, 1239
FokI GGATG 3 cut(s) 1011, 1106, 1129
Fsp4HI GCNGC 6 cut(s) 321, 324, 1070, 1197, 1200, 1239
FspBI CTAG 2 cut(s) 695, 747
GluI GCNGC 6 cut(s) 321, 324, 1070, 1197, 1200, 1239
HaeIII GGCC 2 cut(s) 865, 1178
HapII CCGG 1 cut(s) 146
HgaI GACGC 1 cut(s) 1136
Hin1II CATG 2 cut(s) 400, 970
HincII GTYRAC 2 cut(s) 577, 944
HindII GTYRAC 2 cut(s) 577, 944
HindIII AAGCTT 1 cut(s) 360
HinfI GANTC 6 cut(s) 433, 596, 611, 799, 1104, 1286
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 1 cut(s) 146
HphI GGTGA 3 cut(s) 868, 1036, 1248
Hpy166II GTNNAC 5 cut(s) 151, 176, 577, 763, 944
Hpy188I TCNGA 9 cut(s) 169, 432, 476, 601, 622, 776, 1053, 1109, 1278
Hpy188III TCNNGA 3 cut(s) 200, 352, 1015
Hpy8I GTNNAC 5 cut(s) 151, 176, 577, 763, 944
Hpy99I CGWCG 3 cut(s) 1012, 1130, 1225
HpyAV CCTTC 3 cut(s) 510, 862, 908
HpyCH4III ACNGT 4 cut(s) 173, 389, 442, 1021
HpyCH4IV ACGT 1 cut(s) 885
HpyCH4V TGCA 8 cut(s) 279, 320, 326, 344, 542, 898, 1154, 1170
HpyF10VI GCNNNNNNNGC 5 cut(s) 320, 368, 539, 739, 1247
HpyF3I CTNAG 3 cut(s) 96, 166, 1275
HpySE526I ACGT 1 cut(s) 885
Hsp92II CATG 2 cut(s) 400, 970
KspAI GTTAAC 1 cut(s) 577
KspI CCGCGG 1 cut(s) 1203
LmnI GCTCC 4 cut(s) 233, 368, 509, 1225
Lsp1109I GCAGC 2 cut(s) 310, 332
LweI GCATC 3 cut(s) 288, 1066, 1157
MabI ACCWGGT 1 cut(s) 1258
MaeI CTAG 2 cut(s) 695, 747
MaeII ACGT 1 cut(s) 885
MaeIII GTNAC 7 cut(s) 107, 447, 495, 928, 1024, 1180, 1254
MbiI CCGCTC 1 cut(s) 1274
MboII GAAGA 9 cut(s) 111, 154, 272, 412, 437, 695, 744, 1132, 1260
MfeI CAATTG 1 cut(s) 642
MflI RGATCY 5 cut(s) 196, 354, 427, 478, 1265
MluCI AATT 4 cut(s) 44, 536, 642, 1279
MlyI GAGTC 2 cut(s) 620, 1280
MmeI TCCRAC 2 cut(s) 447, 1076
Mph1103I ATGCAT 1 cut(s) 1172
MseI TTAA 5 cut(s) 576, 626, 827, 909, 1146
MslI CAYNNNNRTG 1 cut(s) 287
MspA1I CMGCKG 4 cut(s) 128, 314, 323, 1202
MspCI CTTAAG 1 cut(s) 1145
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 3 cut(s) 304, 890, 1260
MunI CAATTG 1 cut(s) 642
Mva1269I GAATGC 1 cut(s) 14
MvaI CCWGG 3 cut(s) 304, 890, 1260
MvnI CGCG 1 cut(s) 1202
MwoI GCNNNNNNNGC 5 cut(s) 320, 368, 539, 739, 1247
NlaIII CATG 2 cut(s) 400, 970
NlaIV GGNNCC 4 cut(s) 235, 309, 356, 1191
NmuCI GTSAC 4 cut(s) 107, 1024, 1180, 1254
NsiI ATGCAT 1 cut(s) 1172
PasI CCCWGGG 1 cut(s) 303
PcsI WCGNNNNNNNCGW 1 cut(s) 1131
PctI GAATGC 1 cut(s) 14
PfeI GAWTC 4 cut(s) 433, 596, 799, 1104
PinAI ACCGGT 1 cut(s) 145
PkrI GCNGC 6 cut(s) 322, 325, 1071, 1198, 1201, 1240
Ple19I CGATCG 1 cut(s) 1014
PleI GAGTC 2 cut(s) 619, 1280
PpsI GAGTC 2 cut(s) 619, 1280
PpuMI RGGWCCY 1 cut(s) 1190
Psp5II RGGWCCY 1 cut(s) 1190
Psp6I CCWGG 3 cut(s) 302, 888, 1258
PspGI CCWGG 3 cut(s) 302, 888, 1258
PspN4I GGNNCC 4 cut(s) 235, 309, 356, 1191
PspPI GGNCC 3 cut(s) 151, 647, 1190
PspPPI RGGWCCY 1 cut(s) 1190
PsuI RGATCY 5 cut(s) 196, 354, 427, 478, 1265
PvuI CGATCG 1 cut(s) 1014
PvuII CAGCTG 2 cut(s) 314, 323
RseI CAYNNNNRTG 1 cut(s) 287
SacII CCGCGG 1 cut(s) 1203
SaqAI TTAA 5 cut(s) 576, 626, 827, 909, 1146
SatI GCNGC 6 cut(s) 321, 324, 1070, 1197, 1200, 1239
Sau96I GGNCC 3 cut(s) 151, 647, 1190
SchI GAGTC 2 cut(s) 620, 1280
ScrFI CCNGG 3 cut(s) 304, 890, 1260
SexAI ACCWGGT 1 cut(s) 1258
SfaNI GCATC 3 cut(s) 288, 1066, 1157
Sfr303I CCGCGG 1 cut(s) 1203
SgrBI CCGCGG 1 cut(s) 1203
SinI GGWCC 3 cut(s) 151, 647, 1190
SmiMI CAYNNNNRTG 1 cut(s) 287
SmlI CTYRAG 2 cut(s) 504, 1145
SmoI CTYRAG 2 cut(s) 504, 1145
Sse9I AATT 4 cut(s) 44, 536, 642, 1279
SsiI CCGC 8 cut(s) 126, 533, 1070, 1197, 1200, 1202, 1239, 1272
SspMI CTAG 2 cut(s) 695, 747
StyD4I CCNGG 3 cut(s) 302, 888, 1258
StyI CCWWGG 1 cut(s) 19
TaaI ACNGT 4 cut(s) 173, 389, 442, 1021
TaiI ACGT 1 cut(s) 888
TaqI TCGA 6 cut(s) 258, 594, 609, 1007, 1014, 1134
TasI AATT 4 cut(s) 44, 536, 642, 1279
TauI GCSGC 4 cut(s) 1072, 1199, 1202, 1241
TfiI GAWTC 4 cut(s) 433, 596, 799, 1104
Tru1I TTAA 5 cut(s) 576, 626, 827, 909, 1146
Tru9I TTAA 5 cut(s) 576, 626, 827, 909, 1146
TscAI CASTG 2 cut(s) 100, 447
TseFI GTSAC 4 cut(s) 107, 1024, 1180, 1254
TseI GCWGC 2 cut(s) 320, 323
Tsp45I GTSAC 4 cut(s) 107, 1024, 1180, 1254
TspDTI ATGAA 5 cut(s) 413, 696, 973, 1133, 1282
TspGWI ACGGA 1 cut(s) 1238
TspRI CASTG 2 cut(s) 100, 447
Vha464I CTTAAG 1 cut(s) 1145
VpaK11BI GGWCC 3 cut(s) 151, 647, 1190
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 3 cut(s) 44, 536, 1279
XmiI GTMKAC 1 cut(s) 175
XspI CTAG 2 cut(s) 695, 747
Zsp2I ATGCAT 1 cut(s) 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.