Prupe.6G228400_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0011977
Physical Location & Seq
Reverse (-)
23227985 .. 23229882
1898 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G228400.1

Sequence Viewer

Length: 1449 bp
ATGGCGGCTGATAAAGAAGAAATACGTGTTCTCTTGGTCGTGGCATTACAAGCTCATATGAATCCTATGCTCAAGTTCGCCAGATGTCTTGCATCAAAGGGAGTCTTTATCACTCTCGCCATGACTGAAACTGCAAGAGACACCCTTTTAAACTTAAACTTCAACACGTTCACAACCCAAAACCCCAAAATCAACCTTGAGTTCTTCTCAGATGGGCTCACCGCCGAATTCAACCGTGAGAAGGGTGGAGAGGCCTTGACCACCCTTCAAATCTCAGGTTCCAAAAACCTCTCAAACCTCATCAAAAACCTCACTTTCGTCAAGAAACTAACAATTTCCTGCATAATTTTCAACCCCTTTGTTCCATGGGTTGCTGATGTAGCAGCTGAACTTGGCATCCCTTGTGCCTTGCTTTGGAACCAATCTTGTGCAACCTTTTCTATTCTATACAGATACTCTAAAAAAATCAACCCATTTGATCCTAACTTTGAAATGAACCCAAGTGAGATTTTGGGTTGTCCTGGAATTCCAAATTTAGAAGTCAATGATCTTCCTAGCACTATCCTCCCTTCAACCCCTTTCCATTTTAAGAAGCTGATATCAGATTCAGTTCAGAGCTCAGAGAAGGCAAGTTGGGTTTTGGGCAATTCGTTTTATGAGCTCGAGAAGGACATCAAAGACTCAATGGATTCACTCATTCCAATTCGCCCAATTGGCCCATTGGTCTCATCATTTATACTGGGCAGAACAGAAGAAGATGATAACAATACCCTTCACATTGACATGTGGGAGGCTGAAGATTCCTGCATAGAATGGCTCAACAAGCAGCCAATCTCCTCTGTTATTTATGCCTCATTTGGCAGAGTGACTGTTTTGTCACAAATTCAGATAGACAACATTGCCATGGCATTGAAAACCAGCAAAAGACCATTTCTTTGGGTGCTAAAGGCCCCAACGGAAGGCTCCAAGATGAAGTTAGGTGAATTGCCATCTGGGTTTTTAGAAGAGACCAGAGAGAGGGGCATGGTGGTCAATTGGTGCTCTCAGGAGAAGGTGCTTATGCACAAGGCGGTGGCTTGCTTCATGACCCATGGTGGGTGGAGCTCTACACTTGAGACTGTTGCCTCTGGTGTGCCTGTTGTAGTTTATCCAGAGTGGACTGATCAGCCCACAAATGCCAAGCTTTTGGCTGATGTGTTTAGGGTTGGTGTGAGAATTAGGGTTGGGGAAGATGGGATTGCTGGCTCAGAAGAAATGGGAAGATGCATTGAGGAGGTTGTGGATGGGCCAAGGGCTAAAGAAATGAAGAAGAGAGCTTTGGAGTTGAAGGAAGCAGCAAAGAAAGCAGTGGAAGATGGTGGTTCCTCTGACCTGAATATTAATCAATTTATCAGGGAAATTTCTGGGAAATCTTGCCAAGATTATTTTCTAGGAACTGTTAGAATTTGA

Protein Analysis

483

Amino Acids

53.58

Weight (kDa)

5.45

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011977)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23210 AT2G23250 AT2G23260
fragaria_vesca FvH4_1g16840
malus_domestica MD02G1179400.v1.1
prunus_persica Prupe.6G228400_v2.0.a1
pyrus_communis pycom02g14550
rosa_chinensis RchiOBHm_Chr2g0106741
rosa_laevigata RLG00000017537
rosa_multiflora Rmu_sc0004000.1_g000018 Rmu_sc0004000.1_g000020
rosa_roxburghii Rroxscaffold_2G00136810
rosa_rugosa Rorug02G0138400
rosa_samantha Rh2AG189300 Rh2BG200700 Rh2CG194300 Rh2DG195500
rosa_wichuraiana Rw2G014890 Rw2G014920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 874
AciI CCGC 3 cut(s) 5, 222, 1070
AclWI GGATC 1 cut(s) 473
AcsI RAATTY 6 cut(s) 227, 525, 532, 882, 1398, 1443
AcuI CTGAAG 1 cut(s) 816
AfiI CCNNNNNNNGG 5 cut(s) 241, 414, 959, 1017, 1095
AflIII ACRYGT 3 cut(s) 25, 165, 783
AgsI TTSAA 8 cut(s) 163, 232, 269, 352, 491, 573, 913, 1327
AjnI CCWGG 1 cut(s) 520
AjuI GAANNNNNNNTTGG 4 cut(s) 1301, 1333, 1410, 1442
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 8 cut(s) 53, 386, 595, 618, 661, 1104, 1183, 1316
AluI AGCT 8 cut(s) 53, 386, 595, 618, 661, 1104, 1183, 1316
Alw21I GWGCWC 4 cut(s) 620, 663, 1043, 1106
Alw26I GTCTC 4 cut(s) 132, 730, 1001, 1109
AlwI GGATC 1 cut(s) 473
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 4 cut(s) 252, 715, 948, 1286
ApeKI GCWGC 3 cut(s) 383, 826, 1334
ApoI RAATTY 6 cut(s) 227, 525, 532, 882, 1398, 1443
ArsI GACNNNNNNTTYG 2 cut(s) 918, 950
AseI ATTAAT 1 cut(s) 1380
AspS9I GGNCC 3 cut(s) 716, 949, 1286
AsuHPI GGTGA 2 cut(s) 211, 992
AvaI CYCGRG 1 cut(s) 662
BanII GRGCYC 4 cut(s) 219, 620, 663, 1106
Bbv12I GWGCWC 4 cut(s) 620, 663, 1043, 1106
BbvI GCAGC 3 cut(s) 395, 838, 1346
BccI CCATC 5 cut(s) 206, 997, 1226, 1277, 1349
BciT130I CCWGG 1 cut(s) 522
BclI TGATCA 1 cut(s) 1162
BcoDI GTCTC 4 cut(s) 132, 730, 1001, 1109
BfaI CTAG 2 cut(s) 555, 1430
BglI GCCNNNNNGGC 1 cut(s) 714
BisI GCNGC 4 cut(s) 6, 384, 827, 1335
BlsI GCNGC 4 cut(s) 7, 385, 828, 1336
Bme1390I CCNGG 1 cut(s) 522
BmeT110I CYCGRG 1 cut(s) 662
BmgT120I GGNCC 3 cut(s) 716, 949, 1286
BmiI GGNNCC 5 cut(s) 280, 419, 951, 964, 1363
BmrFI CCNGG 1 cut(s) 522
BmrI ACTGGG 1 cut(s) 749
BmsI GCATC 3 cut(s) 101, 405, 1253
BmuI ACTGGG 1 cut(s) 749
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpuEI CTTGAG 3 cut(s) 56, 218, 1133
BsaAI YACGTR 1 cut(s) 26
BsaI GGTCTC 2 cut(s) 730, 1001
BsaJI CCNNGG 4 cut(s) 365, 903, 1090, 1289
Bsc4I CCNNNNNNNGG 5 cut(s) 241, 414, 959, 1017, 1095
Bse1I ACTGG 1 cut(s) 744
Bse3DI GCAATG 1 cut(s) 897
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 4 cut(s) 365, 903, 1090, 1289
BseGI GGATG 2 cut(s) 396, 1288
BseLI CCNNNNNNNGG 5 cut(s) 241, 414, 959, 1017, 1095
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 5 cut(s) 222, 288, 633, 1058, 1260
BseNI ACTGG 1 cut(s) 744
BseRI GAGGAG 2 cut(s) 826, 1286
BseXI GCAGC 3 cut(s) 395, 838, 1346
BshFI GGCC 4 cut(s) 254, 717, 950, 1288
BsiHKAI GWGCWC 4 cut(s) 620, 663, 1043, 1106
BsiHKCI CYCGRG 1 cut(s) 662
BslI CCNNNNNNNGG 5 cut(s) 241, 414, 959, 1017, 1095
BsmAI GTCTC 4 cut(s) 132, 730, 1001, 1109
BsnI GGCC 4 cut(s) 254, 717, 950, 1288
Bso31I GGTCTC 2 cut(s) 730, 1001
BsoBI CYCGRG 1 cut(s) 662
Bsp1286I GDGCHC 5 cut(s) 219, 620, 663, 1043, 1106
Bsp143I GATC 3 cut(s) 478, 547, 1162
Bsp19I CCATGG 3 cut(s) 365, 903, 1090
BspACI CCGC 3 cut(s) 5, 222, 1070
BspANI GGCC 4 cut(s) 254, 717, 950, 1288
BspCNI CTCAG 5 cut(s) 221, 287, 632, 1057, 1259
BspHI TCATGA 1 cut(s) 1083
BspLI GGNNCC 5 cut(s) 280, 419, 951, 964, 1363
BspPI GGATC 1 cut(s) 473
BspTNI GGTCTC 2 cut(s) 730, 1001
BsrDI GCAATG 1 cut(s) 897
BsrI ACTGG 1 cut(s) 744
BssECI CCNNGG 4 cut(s) 365, 903, 1090, 1289
BssMI GATC 3 cut(s) 478, 547, 1162
BssT1I CCWWGG 4 cut(s) 365, 903, 1090, 1289
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 4 cut(s) 236, 871, 1120, 1438
Bst6I CTCTTC 2 cut(s) 999, 1304
BstBAI YACGTR 1 cut(s) 26
BstC8I GCNNGC 2 cut(s) 1078, 1243
BstDEI CTNAG 5 cut(s) 208, 274, 619, 1044, 1246
BstDSI CCRYGG 3 cut(s) 365, 903, 1090
BstF5I GGATG 2 cut(s) 396, 1288
BstKTI GATC 3 cut(s) 481, 550, 1165
BstMAI GTCTC 4 cut(s) 132, 730, 1001, 1109
BstMBI GATC 3 cut(s) 478, 547, 1162
BstMWI GCNNNNNNNGC 5 cut(s) 50, 380, 714, 823, 1343
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 1 cut(s) 787
BstSCI CCNGG 1 cut(s) 520
BstV1I GCAGC 3 cut(s) 395, 838, 1346
BstXI CCANNNNNNTGG 2 cut(s) 936, 1186
BsuRI GGCC 4 cut(s) 254, 717, 950, 1288
BtgI CCRYGG 3 cut(s) 365, 903, 1090
BtsCI GGATG 2 cut(s) 396, 1288
BtsI GCAGTG 1 cut(s) 1353
BtsIMutI CAGTG 1 cut(s) 1353
Cac8I GCNNGC 2 cut(s) 1078, 1243
CciI TCATGA 1 cut(s) 1083
Cfr13I GGNCC 3 cut(s) 716, 949, 1286
CviAII CATG 7 cut(s) 121, 366, 784, 904, 1024, 1084, 1091
DdeI CTNAG 5 cut(s) 208, 274, 619, 1044, 1246
DpnI GATC 3 cut(s) 480, 549, 1164
DpnII GATC 3 cut(s) 478, 547, 1162
DraI TTTAAA 1 cut(s) 150
DrdI GACNNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 874
Eam1104I CTCTTC 2 cut(s) 999, 1304
EarI CTCTTC 2 cut(s) 999, 1304
Ecl136II GAGCTC 3 cut(s) 618, 661, 1104
Eco130I CCWWGG 4 cut(s) 365, 903, 1090, 1289
Eco147I AGGCCT 1 cut(s) 254
Eco24I GRGCYC 4 cut(s) 219, 620, 663, 1106
Eco31I GGTCTC 2 cut(s) 730, 1001
Eco32I GATATC 1 cut(s) 600
Eco53kI GAGCTC 3 cut(s) 618, 661, 1104
Eco57I CTGAAG 1 cut(s) 816
Eco88I CYCGRG 1 cut(s) 662
EcoICRI GAGCTC 3 cut(s) 618, 661, 1104
EcoO109I RGGNCCY 1 cut(s) 949
EcoRI GAATTC 2 cut(s) 227, 525
EcoRII CCWGG 1 cut(s) 520
EcoRV GATATC 1 cut(s) 600
EcoT14I CCWWGG 4 cut(s) 365, 903, 1090, 1289
EcoT22I ATGCAT 1 cut(s) 1268
EcoT38I GRGCYC 4 cut(s) 219, 620, 663, 1106
ErhI CCWWGG 4 cut(s) 365, 903, 1090, 1289
FaeI CATG 7 cut(s) 124, 369, 787, 907, 1027, 1087, 1094
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FatI CATG 7 cut(s) 120, 365, 783, 903, 1023, 1083, 1090
FauNDI CATATG 1 cut(s) 57
FbaI TGATCA 1 cut(s) 1162
Fnu4HI GCNGC 4 cut(s) 6, 384, 827, 1335
FokI GGATG 2 cut(s) 383, 1295
FriOI GRGCYC 4 cut(s) 219, 620, 663, 1106
Fsp4HI GCNGC 4 cut(s) 6, 384, 827, 1335
FspBI CTAG 2 cut(s) 555, 1430
GluI GCNGC 4 cut(s) 6, 384, 827, 1335
HaeIII GGCC 4 cut(s) 254, 717, 950, 1288
Hin1II CATG 7 cut(s) 124, 369, 787, 907, 1027, 1087, 1094
HindIII AAGCTT 1 cut(s) 1181
HinfI GANTC 6 cut(s) 61, 102, 605, 680, 689, 800
HphI GGTGA 2 cut(s) 211, 992
Hpy166II GTNNAC 2 cut(s) 171, 1158
Hpy188I TCNGA 7 cut(s) 211, 604, 615, 622, 888, 1249, 1369
Hpy188III TCNNGA 5 cut(s) 322, 664, 1046, 1084, 1151
Hpy8I GTNNAC 2 cut(s) 171, 1158
HpyAV CCTTC 9 cut(s) 235, 275, 579, 619, 661, 782, 953, 1045, 1321
HpyCH4III ACNGT 4 cut(s) 236, 871, 1120, 1438
HpyCH4IV ACGT 2 cut(s) 25, 167
HpyCH4V TGCA 7 cut(s) 92, 134, 342, 431, 807, 1063, 1266
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 380, 714, 823, 1343
HpyF3I CTNAG 5 cut(s) 208, 274, 619, 1044, 1246
HpySE526I ACGT 2 cut(s) 25, 167
Hsp92II CATG 7 cut(s) 124, 369, 787, 907, 1027, 1087, 1094
Ksp22I TGATCA 1 cut(s) 1162
Kzo9I GATC 3 cut(s) 478, 547, 1162
LmnI GCTCC 2 cut(s) 968, 1101
Lsp1109I GCAGC 3 cut(s) 395, 838, 1346
LweI GCATC 3 cut(s) 101, 405, 1253
MaeI CTAG 2 cut(s) 555, 1430
MaeII ACGT 2 cut(s) 25, 167
MaeIII GTNAC 2 cut(s) 865, 876
MalI GATC 3 cut(s) 480, 549, 1164
MboI GATC 3 cut(s) 478, 547, 1162
MfeI CAATTG 2 cut(s) 711, 1033
MhlI GDGCHC 5 cut(s) 219, 620, 663, 1043, 1106
MlyI GAGTC 2 cut(s) 111, 674
Mph1103I ATGCAT 1 cut(s) 1268
MseI TTAA 4 cut(s) 149, 155, 588, 1380
MslI CAYNNNNRTG 2 cut(s) 782, 902
MspA1I CMGCKG 1 cut(s) 386
MspR9I CCNGG 1 cut(s) 522
MunI CAATTG 2 cut(s) 711, 1033
MvaI CCWGG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 50, 380, 714, 823, 1343
NcoI CCATGG 3 cut(s) 365, 903, 1090
NdeI CATATG 1 cut(s) 57
NdeII GATC 3 cut(s) 478, 547, 1162
NlaIII CATG 7 cut(s) 124, 369, 787, 907, 1027, 1087, 1094
NlaIV GGNNCC 5 cut(s) 280, 419, 951, 964, 1363
NmuCI GTSAC 2 cut(s) 865, 876
NsiI ATGCAT 1 cut(s) 1268
NspI RCATGY 1 cut(s) 787
PaeR7I CTCGAG 1 cut(s) 662
PagI TCATGA 1 cut(s) 1083
PceI AGGCCT 1 cut(s) 254
PciI ACATGT 1 cut(s) 783
PfeI GAWTC 4 cut(s) 61, 605, 689, 800
PfoI TCCNGGA 1 cut(s) 520
PkrI GCNGC 4 cut(s) 7, 385, 828, 1336
PleI GAGTC 2 cut(s) 110, 674
PpsI GAGTC 2 cut(s) 110, 674
Ppu21I YACGTR 1 cut(s) 26
PscI ACATGT 1 cut(s) 783
PshBI ATTAAT 1 cut(s) 1380
Psp124BI GAGCTC 3 cut(s) 620, 663, 1106
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 5 cut(s) 280, 419, 951, 964, 1363
PspPI GGNCC 3 cut(s) 716, 949, 1286
PvuII CAGCTG 1 cut(s) 386
RseI CAYNNNNRTG 2 cut(s) 782, 902
SacI GAGCTC 3 cut(s) 620, 663, 1106
SaqAI TTAA 4 cut(s) 149, 155, 588, 1380
SatI GCNGC 4 cut(s) 6, 384, 827, 1335
Sau3AI GATC 3 cut(s) 478, 547, 1162
Sau96I GGNCC 3 cut(s) 716, 949, 1286
SchI GAGTC 2 cut(s) 111, 674
ScrFI CCNGG 1 cut(s) 522
SduI GDGCHC 5 cut(s) 219, 620, 663, 1043, 1106
SfaNI GCATC 3 cut(s) 101, 405, 1253
Sfr274I CTCGAG 1 cut(s) 662
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 2 cut(s) 782, 902
SmlI CTYRAG 4 cut(s) 71, 197, 662, 1112
SmoI CTYRAG 4 cut(s) 71, 197, 662, 1112
SseBI AGGCCT 1 cut(s) 254
SsiI CCGC 3 cut(s) 5, 222, 1070
SspI AATATT 1 cut(s) 1378
SspMI CTAG 2 cut(s) 555, 1430
SstI GAGCTC 3 cut(s) 620, 663, 1106
StuI AGGCCT 1 cut(s) 254
StyD4I CCNGG 1 cut(s) 520
StyI CCWWGG 4 cut(s) 365, 903, 1090, 1289
TaaI ACNGT 4 cut(s) 236, 871, 1120, 1438
TaiI ACGT 2 cut(s) 28, 170
TaqI TCGA 1 cut(s) 663
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 4 cut(s) 61, 605, 689, 800
Tru1I TTAA 4 cut(s) 149, 155, 588, 1380
Tru9I TTAA 4 cut(s) 149, 155, 588, 1380
TscAI CASTG 1 cut(s) 1353
TseFI GTSAC 2 cut(s) 865, 876
TseI GCWGC 3 cut(s) 383, 826, 1334
Tsp45I GTSAC 2 cut(s) 865, 876
TspDTI ATGAA 5 cut(s) 74, 509, 986, 1072, 1319
TspGWI ACGGA 1 cut(s) 971
TspRI CASTG 1 cut(s) 1353
VspI ATTAAT 1 cut(s) 1380
XapI RAATTY 6 cut(s) 227, 525, 532, 882, 1398, 1443
XceI RCATGY 1 cut(s) 787
XhoI CTCGAG 1 cut(s) 662
XspI CTAG 2 cut(s) 555, 1430
Zsp2I ATGCAT 1 cut(s) 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.