AT2G24230

Leucine-rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0016668
Physical Location & Seq
Reverse (-)
10301817 .. 10304812
2996 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G24230.1

Sequence Viewer

Length: 2562 bp
ATGGGTCTTGGTCTTGGTTTTTGGGGTTATGCATTGTTTCTTTCTCTGTTCTTGAAGCAATCTCATTGCCAAGAACCAAACACAGATGGTTTCTTTGTCTCTGAATTCTATAAGCAAATGGGTTTAAGCTCTTCTCAAGCTTATAACTTCTCTGCTCCTTTTTGTTCATGGCAAGGTTTGTTCTGTGATTCCAAGAATGAGCATGTGATTATGTTAATTGCTTCTGGAATGAGTTTATCTGGTCAAATCCCTGATAACACAATTGGTAAACTCAGCAAGCTTCAATCTTTGGATCTTAGCAACAACAAAATCTCTGCTTTACCATCTGATTTCTGGAGTTTGAACACTTTGAAGAATCTCAACCTCTCTTTCAACAAGATCTCTGGGTCTTTCTCTAGTAATGTTGGCAATTTTGGGCAGCTTGAGTTACTTGATATCTCTTACAACAATTTCTCTGGTGCAATCCCTGAAGCTGTGGATTCTCTTGTTAGTTTGAGAGTCTTGAAGCTTGATCATAATGGGTTTCAGATGTCGATTCCACGAGGACTTCTTGGTTGCCAATCCCTGGTTTCTATTGATCTCTCCTCTAACCAGCTTGAAGGGTCTCTTCCTGATGGGTTTGGCTCTGCATTTCCAAAGCTTGAGACTTTGAGCCTTGCAGGAAACAAGATTCATGGCAGGGACACAGATTTTGCTGATATGAAATCCATCAGTTTTCTCAACATTTCAGGAAATCAGTTTGATGGTTCAGTGACAGGTGTGTTCAAGGAGACTTTAGAAGTGGCTGATCTCAGCAAAAACCGGTTTCAAGGTCATATCTCATCTCAGGTAGACTCCAACTGGTTTAGTTTGGTTTATCTTGACTTGTCTGAGAATGAGCTCAGTGGAGTTATCAAGAATCTGACACTACTAAAGAAGCTCAAGCACTTAAATCTAGCTTGGAATAGATTCAACAGAGGAATGTTTCCGAGGATTGAGATGCTTTCTGGTTTAGAGTATCTTAACTTGTCAAACACAAATCTTTCTGGTCACATACCTAGAGAGATCTCAAAGCTGAGTGATTTGAGTACACTCGATGTTTCTGGAAACCATCTTGCAGGACATATCCCGATTTTGAGTATCAAGAACCTTGTGGCTATCGATGTGTCGAGGAACAATTTGACGGGAGAGATACCGATGTCTATCCTTGAGAAGCTCCCTTGGATGGAGAGATTCAACTTCTCTTTCAACAACTTAACATTTTGTTCCGGAAAGTTCTCAGCTGAAACTCTGAACAGATCCTTCTTTGGTTCTACAAATAGCTGCCCTATCGCTGCAAACCCAGCACTTTTCAAGAGAAAAAGATCAGTCACTGGAGGACTTAAGCTGGCTTTAGCAGTGACGCTTTCTACGATGTGTTTACTCATAGGAGCATTGATTTTTGTAGCATTTGGCTGCAGAAGGAAAACTAAATCCGGTGAAGCCAAAGATCTCTCAGTAAAGGAGGAACAAAGCATTTCAGGTCCATTCTCTTTCCAAACAGATTCCACTACATGGGTGGCTGATGTGAAGCAAGCAAATGCAGTTCCTGTGGTTATCTTTGAGAAGCCATTGTTGAACATAACGTTTTCGGATCTCTTGTCTGCAACTTCCAACTTCGACAGAGACACTCTCTTAGCGGACGGCAAATTTGGTCCTGTTTATCGAGGTTTCCTCCCCGGTGGGATACATGTAGCTGTAAAAGTTTTGGTTCATGGCTCAACTCTTAGTGACCAAGAAGCAGCTAGAGAGCTCGAGTTTCTTGGAAGGATCAAGCACCCAAATCTTGTCCCATTAACTGGATATTGCATAGCCGGTGATCAAAGGATCGCCATTTACGAGTACATGGAAAACGGTAACTTGCAAAACCTGCTTCATGATCTGCCATTTGGAGTTCAGACAACAGATGATTGGACCACGGATACATGGGAAGAAGAAACTGACAATGGAACCCAAAACATAGGGACTGAAGGCCCTGTGGCGACATGGCGGTTTAGGCACAAGATAGCACTTGGAACTGCCCGAGCATTAGCTTTCCTTCACCACGGTTGTTCACCGCCAATAATCCATAGGGATGTGAAAGCTAGTAGTGTTTATCTTGACCAGAACTGGGAACCAAGATTATCTGATTTTGGTTTAGCCAAAGTTTTTGGAAATGGTTTGGACGATGAGATTATTCATGGCTCACCTGGTTATCTCCCTCCTGAGTTCTTGCAACCCGAACACGAGCTGCCAACACCGAAATCTGACGTCTATTGCTTTGGAGTTGTTCTGTTTGAACTCATGACAGGGAAAAAGCCGATTGAAGATGATTATCTTGATGAGAAAGATACTAACTTGGTGAGTTGGGTTAGAAGTTTAGTTAGGAAGAATCAAGCATCAAAAGCTATTGATCCAAAAATCCAAGAGACAGGCTCAGAAGAACAGATGGAAGAAGCTCTCAAGATTGGTTACCTCTGCACAGCTGATCTTCCTTCAAAGCGGCCAAGTATGCAGCAAGTAGTTGGTCTTCTTAAAGATATTGAACCAAAATCTAACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

853

Amino Acids

94.12

Weight (kDa)

5.69

Isoelectric Point (pI)

31.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 83 - 127 3e-08 Leucine rich repeat
LRR_14 PF23598 86 - 186 5.7e-09 Leucine-rich repeat region
LRR_8 PF13855 188 - 247 1.4e-07 Leucine rich repeat
Pkinase PF00069 550 - 841 8.9e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 550 - 842 1.9e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016668)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24230
fragaria_vesca FvH4_1g01000
malus_domestica MD02G1008100.v1.1 MD15G1152400.v1.1
prunus_persica Prupe.7G262300_v2.0.a1
pyrus_communis pycom15g13700
rosa_chinensis RchiOBHm_Chr2g0085731
rosa_laevigata RLG00000015715
rosa_multiflora Rmu_sc0009759.1_g000005 Rmu_sc0023131.1_g000002 Rmu_sc0033740.1_g000001
rosa_rugosa Rorug01G0462800
rosa_samantha Rh2CG013300
rosa_wichuraiana Rw2G001060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 144
AatII GACGTC 1 cut(s) 2271
Acc36I ACCTGC 1 cut(s) 1896
AccB7I CCANNNNNTGG 3 cut(s) 565, 1533, 1817
AccI GTMKAC 1 cut(s) 831
AccIII TCCGGA 1 cut(s) 1247
AciI CCGC 4 cut(s) 1658, 2008, 2075, 2500
AclI AACGTT 1 cut(s) 1604
AclWI GGATC 6 cut(s) 300, 1272, 1620, 1796, 1853, 2405
AcoI YGGCCR 1 cut(s) 2501
AcsI RAATTY 2 cut(s) 104, 1667
AcuI CTGAAG 2 cut(s) 489, 2007
AcyI GRCGYC 1 cut(s) 2268
AfaI GTAC 2 cut(s) 1069, 1862
AfiI CCNNNNNNNGG 5 cut(s) 565, 1204, 1533, 1817, 2128
AflII CTTAAG 1 cut(s) 1361
AflIII ACRYGT 1 cut(s) 1708
AgeI ACCGGT 1 cut(s) 801
AjnI CCWGG 2 cut(s) 564, 2206
Alw21I GWGCWC 2 cut(s) 882, 1773
Alw26I GTCTC 6 cut(s) 103, 609, 638, 764, 1638, 2420
AlwI GGATC 6 cut(s) 300, 1272, 1620, 1796, 1853, 2405
AlwNI CAGNNNCTG 2 cut(s) 1352, 1568
Ama87I CYCGRG 2 cut(s) 1772, 2040
Aor13HI TCCGGA 1 cut(s) 1247
AoxI GGCC 2 cut(s) 1990, 2501
ApeKI GCWGC 7 cut(s) 418, 1302, 1313, 1434, 1760, 2248, 2512
ApoI RAATTY 2 cut(s) 104, 1667
ArsI GACNNNNNNTTYG 4 cut(s) 674, 706, 1652, 1684
AsiGI ACCGGT 1 cut(s) 801
Asp700I GAANNNNTTC 1 cut(s) 947
AspS9I GGNCC 4 cut(s) 1502, 1673, 1932, 1991
AsuC2I CCSGG 1 cut(s) 1698
AsuHPI GGTGA 6 cut(s) 1469, 1847, 2051, 2064, 2196, 2371
AvaI CYCGRG 2 cut(s) 1772, 2040
AvaII GGWCC 3 cut(s) 1502, 1673, 1932
BaeI ACNNNNGTAYC 2 cut(s) 1163, 1196
BanII GRGCYC 2 cut(s) 882, 1773
BarI GAAGNNNNNNTAC 2 cut(s) 2511, 2543
BauI CACGAG 2 cut(s) 540, 2243
BbsI GAAGAC 1 cut(s) 2519
Bbv12I GWGCWC 2 cut(s) 882, 1773
BbvI GCAGC 7 cut(s) 430, 1289, 1300, 1421, 1772, 2235, 2524
BccI CCATC 8 cut(s) 80, 331, 608, 716, 737, 1098, 1198, 2440
BceAI ACGGC 1 cut(s) 1678
BciT130I CCWGG 2 cut(s) 566, 2208
BciVI GTATCC 2 cut(s) 1698, 1933
BclI TGATCA 2 cut(s) 511, 1837
BcnI CCSGG 1 cut(s) 1698
BcoDI GTCTC 6 cut(s) 103, 609, 638, 764, 1638, 2420
BfaI CTAG 5 cut(s) 396, 935, 1038, 1764, 2103
BfmI CTRYAG 1 cut(s) 1435
BfrI CTTAAG 1 cut(s) 1361
BfuAI ACCTGC 1 cut(s) 1896
BfuI GTATCC 2 cut(s) 1698, 1933
BglII AGATCT 3 cut(s) 378, 1044, 1468
BisI GCNGC 8 cut(s) 419, 1303, 1314, 1435, 1761, 2249, 2501, 2513
BlsI GCNGC 8 cut(s) 420, 1304, 1315, 1436, 1762, 2250, 2502, 2514
Bme1390I CCNGG 3 cut(s) 566, 1698, 2208
Bme18I GGWCC 3 cut(s) 1502, 1673, 1932
BmeT110I CYCGRG 2 cut(s) 1772, 2040
BmgT120I GGNCC 4 cut(s) 1502, 1673, 1932, 1991
BmiI GGNNCC 2 cut(s) 1969, 2133
BmrFI CCNGG 3 cut(s) 566, 1698, 2208
BmrI ACTGGG 1 cut(s) 2137
BmsI GCATC 2 cut(s) 969, 2405
BmuI ACTGGG 1 cut(s) 2137
BpiI GAAGAC 1 cut(s) 2519
BplI GAGNNNNNCTC 6 cut(s) 1635, 1667, 1677, 1709, 2417, 2449
BpmI CTGGAG 2 cut(s) 355, 1374
BpuEI CTTGAG 6 cut(s) 120, 443, 662, 905, 1208, 2444
BpuMI CCSGG 1 cut(s) 1698
Bsa29I ATCGAT 1 cut(s) 1140
BsaBI GATNNNNATC 2 cut(s) 1181, 2331
BsaHI GRCGYC 1 cut(s) 2268
BsaI GGTCTC 1 cut(s) 609
BsaJI CCNNGG 6 cut(s) 564, 968, 1199, 1696, 1935, 2062
BsaWI WCCGGW 3 cut(s) 801, 1247, 1454
Bsc4I CCNNNNNNNGG 5 cut(s) 565, 1204, 1533, 1817, 2128
Bse118I RCCGGY 2 cut(s) 801, 1832
Bse1I ACTGG 5 cut(s) 845, 1357, 1822, 2132, 2557
Bse3DI GCAATG 1 cut(s) 64
Bse8I GATNNNNATC 2 cut(s) 1181, 2331
BseAI TCCGGA 1 cut(s) 1247
BseBI CCWGG 2 cut(s) 566, 2208
BseCI ATCGAT 1 cut(s) 1140
BseDI CCNNGG 6 cut(s) 564, 968, 1199, 1696, 1935, 2062
BseGI GGATG 2 cut(s) 1209, 2098
BseJI GATNNNNATC 2 cut(s) 1181, 2331
BseLI CCNNNNNNNGG 5 cut(s) 565, 1204, 1533, 1817, 2128
BseMI GCAATG 1 cut(s) 64
BseNI ACTGG 5 cut(s) 845, 1357, 1822, 2132, 2557
BseRI GAGGAG 1 cut(s) 574
BseXI GCAGC 7 cut(s) 430, 1289, 1300, 1421, 1772, 2235, 2524
BseYI CCCAGC 1 cut(s) 1321
BsgI GTGCAG 1 cut(s) 2461
BshFI GGCC 2 cut(s) 1992, 2503
BshTI ACCGGT 1 cut(s) 801
BshVI ATCGAT 1 cut(s) 1140
BsiHKAI GWGCWC 2 cut(s) 882, 1773
BsiHKCI CYCGRG 2 cut(s) 1772, 2040
BsiSI CCGG 5 cut(s) 802, 1248, 1455, 1698, 1833
BslFI GGGAC 3 cut(s) 695, 1793, 1996
BslI CCNNNNNNNGG 5 cut(s) 565, 1204, 1533, 1817, 2128
BsmAI GTCTC 6 cut(s) 103, 609, 638, 764, 1638, 2420
BsmFI GGGAC 3 cut(s) 695, 1793, 1996
BsnI GGCC 2 cut(s) 1992, 2503
Bso31I GGTCTC 1 cut(s) 609
BsoBI CYCGRG 2 cut(s) 1772, 2040
Bsp1286I GDGCHC 2 cut(s) 882, 1773
Bsp13I TCCGGA 1 cut(s) 1247
BspACI CCGC 4 cut(s) 1658, 2008, 2075, 2500
BspANI GGCC 2 cut(s) 1992, 2503
BspDI ATCGAT 1 cut(s) 1140
BspEI TCCGGA 1 cut(s) 1247
BspHI TCATGA 2 cut(s) 1894, 2301
BspLI GGNNCC 2 cut(s) 1969, 2133
BspMAI CTGCAG 1 cut(s) 1439
BspMI ACCTGC 1 cut(s) 1896
BspPI GGATC 6 cut(s) 300, 1272, 1620, 1796, 1853, 2405
BspQI GCTCTTC 1 cut(s) 136
BspTI CTTAAG 1 cut(s) 1361
BspTNI GGTCTC 1 cut(s) 609
BsrDI GCAATG 1 cut(s) 64
BsrFI RCCGGY 2 cut(s) 801, 1832
BsrI ACTGG 5 cut(s) 845, 1357, 1822, 2132, 2557
BssAI RCCGGY 2 cut(s) 801, 1832
BssECI CCNNGG 6 cut(s) 564, 968, 1199, 1696, 1935, 2062
BssNI GRCGYC 1 cut(s) 2268
BssSI CACGAG 2 cut(s) 540, 2243
BssT1I CCWWGG 1 cut(s) 1199
Bst2BI CACGAG 2 cut(s) 540, 2243
Bst2UI CCWGG 2 cut(s) 566, 2208
Bst4CI ACNGT 2 cut(s) 1874, 2066
Bst6I CTCTTC 2 cut(s) 136, 612
BstACI GRCGYC 1 cut(s) 2268
BstAFI CTTAAG 1 cut(s) 1361
BstAPI GCANNNNNTGC 1 cut(s) 1888
BstC8I GCNNGC 3 cut(s) 278, 1368, 1554
BstDSI CCRYGG 2 cut(s) 1935, 2062
BstEII GGTNACC 1 cut(s) 2468
BstF5I GGATG 2 cut(s) 1209, 2098
BstMAI GTCTC 6 cut(s) 103, 609, 638, 764, 1638, 2420
BstMWI GCNNNNNNNGC 5 cut(s) 1322, 1888, 2014, 2402, 2509
BstNI CCWGG 2 cut(s) 566, 2208
BstNSI RCATGY 2 cut(s) 206, 1712
BstPI GGTNACC 1 cut(s) 2468
BstSCI CCNGG 3 cut(s) 564, 1696, 2206
BstSFI CTRYAG 1 cut(s) 1435
BstV1I GCAGC 7 cut(s) 430, 1289, 1300, 1421, 1772, 2235, 2524
BstV2I GAAGAC 1 cut(s) 2519
BstX2I RGATCY 6 cut(s) 292, 378, 1044, 1277, 1468, 1612
BstYI RGATCY 6 cut(s) 292, 378, 1044, 1277, 1468, 1612
Bsu15I ATCGAT 1 cut(s) 1140
BsuI GTATCC 2 cut(s) 1698, 1933
BsuRI GGCC 2 cut(s) 1992, 2503
BsuTUI ATCGAT 1 cut(s) 1140
BtgI CCRYGG 2 cut(s) 1935, 2062
BtsCI GGATG 2 cut(s) 1209, 2098
BtsI GCAGTG 1 cut(s) 1383
BtsIMutI CAGTG 4 cut(s) 756, 889, 1350, 1383
BveI ACCTGC 1 cut(s) 1896
Cac8I GCNNGC 3 cut(s) 278, 1368, 1554
CaiI CAGNNNCTG 2 cut(s) 1352, 1568
CciI TCATGA 2 cut(s) 1894, 2301
Cfr10I RCCGGY 2 cut(s) 801, 1832
Cfr13I GGNCC 4 cut(s) 1502, 1673, 1932, 1991
ClaI ATCGAT 1 cut(s) 1140
CseI GACGC 1 cut(s) 1390
CsiI ACCWGGT 1 cut(s) 2206
Csp6I GTAC 2 cut(s) 1068, 1861
CspAI ACCGGT 1 cut(s) 801
CviQI GTAC 2 cut(s) 1068, 1861
EaeI YGGCCR 1 cut(s) 2501
Eam1104I CTCTTC 2 cut(s) 136, 612
EarI CTCTTC 2 cut(s) 136, 612
Ecl136II GAGCTC 2 cut(s) 880, 1771
Eco130I CCWWGG 1 cut(s) 1199
Eco24I GRGCYC 2 cut(s) 882, 1773
Eco31I GGTCTC 1 cut(s) 609
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 3 cut(s) 1502, 1673, 1932
Eco53kI GAGCTC 2 cut(s) 880, 1771
Eco57I CTGAAG 2 cut(s) 489, 2007
Eco88I CYCGRG 2 cut(s) 1772, 2040
Eco91I GGTNACC 1 cut(s) 2468
EcoICRI GAGCTC 2 cut(s) 880, 1771
EcoO109I RGGNCCY 1 cut(s) 1991
EcoO65I GGTNACC 1 cut(s) 2468
EcoRI GAATTC 1 cut(s) 104
EcoRII CCWGG 2 cut(s) 564, 2206
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 1 cut(s) 1199
EcoT22I ATGCAT 1 cut(s) 34
EcoT38I GRGCYC 2 cut(s) 882, 1773
ErhI CCWWGG 1 cut(s) 1199
FalI AAGNNNNNCTT 2 cut(s) 591, 623
FaqI GGGAC 3 cut(s) 695, 1793, 1996
FbaI TGATCA 2 cut(s) 511, 1837
FblI GTMKAC 1 cut(s) 831
Fnu4HI GCNGC 8 cut(s) 419, 1303, 1314, 1435, 1761, 2249, 2501, 2513
FokI GGATG 2 cut(s) 1216, 2105
FriOI GRGCYC 2 cut(s) 882, 1773
Fsp4HI GCNGC 8 cut(s) 419, 1303, 1314, 1435, 1761, 2249, 2501, 2513
FspBI CTAG 5 cut(s) 396, 935, 1038, 1764, 2103
GluI GCNGC 8 cut(s) 419, 1303, 1314, 1435, 1761, 2249, 2501, 2513
GsaI CCCAGC 1 cut(s) 1325
GsuI CTGGAG 2 cut(s) 355, 1374
HaeIII GGCC 2 cut(s) 1992, 2503
HapII CCGG 5 cut(s) 802, 1248, 1455, 1698, 1833
HgaI GACGC 1 cut(s) 1390
Hin1I GRCGYC 1 cut(s) 2268
HindIII AAGCTT 4 cut(s) 138, 278, 506, 638
HpaII CCGG 5 cut(s) 802, 1248, 1455, 1698, 1833
HphI GGTGA 6 cut(s) 1469, 1847, 2051, 2064, 2196, 2371
Hpy166II GTNNAC 5 cut(s) 269, 832, 1070, 1400, 2072
Hpy8I GTNNAC 5 cut(s) 269, 832, 1070, 1400, 2072
HpyAV CCTTC 7 cut(s) 593, 1291, 1434, 1779, 1982, 2066, 2502
HpyCH4III ACNGT 2 cut(s) 1874, 2066
HpyCH4IV ACGT 2 cut(s) 1604, 2268
HpyF10VI GCNNNNNNNGC 5 cut(s) 1322, 1888, 2014, 2402, 2509
HpySE526I ACGT 2 cut(s) 1604, 2268
Hsp92I GRCGYC 1 cut(s) 2268
Kpn2I TCCGGA 1 cut(s) 1247
Ksp22I TGATCA 2 cut(s) 511, 1837
LguI GCTCTTC 1 cut(s) 136
LmnI GCTCC 3 cut(s) 160, 1200, 1409
Lsp1109I GCAGC 7 cut(s) 430, 1289, 1300, 1421, 1772, 2235, 2524
LweI GCATC 2 cut(s) 969, 2405
MabI ACCWGGT 1 cut(s) 2206
MaeI CTAG 5 cut(s) 396, 935, 1038, 1764, 2103
MaeII ACGT 2 cut(s) 1604, 2268
MaeIII GTNAC 8 cut(s) 426, 751, 1028, 1348, 1378, 1748, 1874, 2468
MfeI CAATTG 1 cut(s) 261
MflI RGATCY 6 cut(s) 292, 378, 1044, 1277, 1468, 1612
MhlI GDGCHC 2 cut(s) 882, 1773
MluCI AATT 7 cut(s) 104, 216, 261, 409, 448, 1156, 1667
MlyI GAGTC 2 cut(s) 507, 827
MmeI TCCRAC 2 cut(s) 861, 1656
Mph1103I ATGCAT 1 cut(s) 34
MroI TCCGGA 1 cut(s) 1247
MroXI GAANNNNTTC 1 cut(s) 947
MseI TTAA 8 cut(s) 125, 215, 929, 1002, 1235, 1362, 1814, 2532
MslI CAYNNNNRTG 1 cut(s) 2091
MspA1I CMGCKG 2 cut(s) 1262, 2483
MspCI CTTAAG 1 cut(s) 1361
MspI CCGG 5 cut(s) 802, 1248, 1455, 1698, 1833
MspR9I CCNGG 3 cut(s) 566, 1698, 2208
MunI CAATTG 1 cut(s) 261
MvaI CCWGG 2 cut(s) 566, 2208
MwoI GCNNNNNNNGC 5 cut(s) 1322, 1888, 2014, 2402, 2509
NciI CCSGG 1 cut(s) 1698
NlaIV GGNNCC 2 cut(s) 1969, 2133
NmuCI GTSAC 5 cut(s) 751, 1028, 1348, 1378, 1748
NsiI ATGCAT 1 cut(s) 34
NspI RCATGY 2 cut(s) 206, 1712
PaeR7I CTCGAG 1 cut(s) 1772
PagI TCATGA 2 cut(s) 1894, 2301
PciI ACATGT 1 cut(s) 1708
PciSI GCTCTTC 1 cut(s) 136
PcsI WCGNNNNNNNCGW 2 cut(s) 1388, 1854
PdmI GAANNNNTTC 1 cut(s) 947
PflMI CCANNNNNTGG 3 cut(s) 565, 1533, 1817
PinAI ACCGGT 1 cut(s) 801
PkrI GCNGC 8 cut(s) 420, 1304, 1315, 1436, 1762, 2250, 2502, 2514
PleI GAGTC 2 cut(s) 506, 827
PpsI GAGTC 2 cut(s) 506, 827
PscI ACATGT 1 cut(s) 1708
PsiI TTATAA 1 cut(s) 144
Psp124BI GAGCTC 2 cut(s) 882, 1773
Psp1406I AACGTT 1 cut(s) 1604
Psp6I CCWGG 2 cut(s) 564, 2206
PspEI GGTNACC 1 cut(s) 2468
PspFI CCCAGC 1 cut(s) 1321
PspGI CCWGG 2 cut(s) 564, 2206
PspN4I GGNNCC 2 cut(s) 1969, 2133
PspPI GGNCC 4 cut(s) 1502, 1673, 1932, 1991
PspXI VCTCGAGB 1 cut(s) 1772
PstI CTGCAG 1 cut(s) 1439
PstNI CAGNNNCTG 2 cut(s) 1352, 1568
PsuI RGATCY 6 cut(s) 292, 378, 1044, 1277, 1468, 1612
PvuII CAGCTG 2 cut(s) 1262, 2483
RsaI GTAC 2 cut(s) 1069, 1862
RsaNI GTAC 2 cut(s) 1068, 1861
RseI CAYNNNNRTG 1 cut(s) 2091
SacI GAGCTC 2 cut(s) 882, 1773
SapI GCTCTTC 1 cut(s) 136
SaqAI TTAA 8 cut(s) 125, 215, 929, 1002, 1235, 1362, 1814, 2532
SatI GCNGC 8 cut(s) 419, 1303, 1314, 1435, 1761, 2249, 2501, 2513
Sau96I GGNCC 4 cut(s) 1502, 1673, 1932, 1991
SchI GAGTC 2 cut(s) 507, 827
ScrFI CCNGG 3 cut(s) 566, 1698, 2208
SduI GDGCHC 2 cut(s) 882, 1773
SexAI ACCWGGT 1 cut(s) 2206
SfaNI GCATC 2 cut(s) 969, 2405
SfcI CTRYAG 1 cut(s) 1435
Sfr274I CTCGAG 1 cut(s) 1772
SinI GGWCC 3 cut(s) 1502, 1673, 1932
SlaI CTCGAG 1 cut(s) 1772
SmiMI CAYNNNNRTG 1 cut(s) 2091
SmlI CTYRAG 8 cut(s) 135, 422, 641, 920, 1187, 1361, 1772, 2459
SmoI CTYRAG 8 cut(s) 135, 422, 641, 920, 1187, 1361, 1772, 2459
Sse9I AATT 7 cut(s) 104, 216, 261, 409, 448, 1156, 1667
SsiI CCGC 4 cut(s) 1658, 2008, 2075, 2500
SspMI CTAG 5 cut(s) 396, 935, 1038, 1764, 2103
SstI GAGCTC 2 cut(s) 882, 1773
StyD4I CCNGG 3 cut(s) 564, 1696, 2206
StyI CCWWGG 1 cut(s) 1199
TaaI ACNGT 2 cut(s) 1874, 2066
TaiI ACGT 2 cut(s) 1607, 2271
TaqI TCGA 7 cut(s) 533, 1074, 1140, 1148, 1638, 1684, 1773
TasI AATT 7 cut(s) 104, 216, 261, 409, 448, 1156, 1667
TatI WGTACW 2 cut(s) 1067, 1860
TauI GCSGC 1 cut(s) 2503
Tru1I TTAA 8 cut(s) 125, 215, 929, 1002, 1235, 1362, 1814, 2532
Tru9I TTAA 8 cut(s) 125, 215, 929, 1002, 1235, 1362, 1814, 2532
TscAI CASTG 4 cut(s) 756, 889, 1357, 1383
TseFI GTSAC 5 cut(s) 751, 1028, 1348, 1378, 1748
TseI GCWGC 7 cut(s) 418, 1302, 1313, 1434, 1760, 2248, 2512
Tsp45I GTSAC 5 cut(s) 751, 1028, 1348, 1378, 1748
TspDTI ATGAA 6 cut(s) 156, 662, 716, 1721, 1883, 2186
TspGWI ACGGA 1 cut(s) 1952
TspRI CASTG 4 cut(s) 756, 889, 1357, 1383
Van91I CCANNNNNTGG 3 cut(s) 565, 1533, 1817
Vha464I CTTAAG 1 cut(s) 1361
VpaK11BI GGWCC 3 cut(s) 1502, 1673, 1932
XapI RAATTY 2 cut(s) 104, 1667
XceI RCATGY 2 cut(s) 206, 1712
XcmI CCANNNNNNNNNTGG 2 cut(s) 330, 1534
XhoI CTCGAG 1 cut(s) 1772
XmiI GTMKAC 1 cut(s) 831
XmnI GAANNNNTTC 1 cut(s) 947
XspI CTAG 5 cut(s) 396, 935, 1038, 1764, 2103
ZraI GACGTC 1 cut(s) 2269
Zsp2I ATGCAT 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.