Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004642

Physical Location & Seq

Genomic Coordinates Reverse (-)

55549549 .. 55553931

Gene Structure 4383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0462800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGGCGGTGGAGGTCCCGGAGGACGCCCCCGCCCCCGGAGTCGACGGCGACATCGCCGCGGACCTCGATATGCAAATCTCAGACGACGACGACGACCCCTCAGACGGCGAACACGACGAGGAGAACGGCGGCTCAGGCGATGAGAACGACGACATCGAGATCGCAGAAGCTGACGAGAACGACGACGCTGAGAATCCAGAAGACGACGACGATGACGGCGACGAGCTTATCCACGAAGTCGACAGCGACGAGTCGTTGTCGGAGGAAGAGGTGGAGTGCGATGAGACGTGGCTAGAGGAAGCTGAATTCGCCGGAGGGCGCAAGTCCCAAGAGTGTACTTTGATTTTGACACAAGGAATGTCAACTTCAAGTCTCGCACTAAACGGCGTTGTTTCCATGAAGGGTTGGGAAAGGTACGGTGTTTACCCACTGGTAGGTGAATTGCTCAACGTGAGAGAAGCTGGCTTCTTCGAGGTCATGTATAATCCGATTTTCAAGACGATTATGAAGACTCTCGGACTTGAGCTAGATGAAGAATTTACCAGTACCGAATCTTTGAGATATGGCCGGGTCATTATTATGACTGCTGAACAGGATCATTATGGTAGTTACATCAAAGGGTTGTTGATCAATTTTCTTCATATGTTCTGGCCATCATTGCTAAAGCTTCCGTCATTTTTGGCTGAGCTTATAGCTCCTCTTACCATCAAGGCAACAAAAGAGAGTGAGGAAGGGAAAGAAAAACGTGTATTCTATTCCCTGCAAGAGTATGAAGCTTGGAGGGAAAGTTTGAGGGGCAATGCGAGTGGCTGGGCCATTGAGAAGGATGTAGCATGTGTTTTTGATGAAGGGAAGGATTATTTTGAAAATCTTTTAATGCAGAAGAAAGATTTTGTTTGGGTAGATGAACGTGATGATGAGGCAATTGAGCTTGCTTTCAGCAAGAAGTTTGAGGTGGGAAGTTTGCAGTCTGGTATGCATCTTGATCATGAGGAGAAACTTGTAACTTATTGTGACTTTGTTGACAAGGAGCTTATACCCTTTTCCATGCTTGCTGTTCTACAACGCTCAATTCCGTCAATGGTTGATGGCTTGAAGCCTCATCAAAGAAAGGTTCTATTCAGCTCTTTTAAGAGGGACGACTTTATCAAGGAAGAAATAGTTGCCAACTTTGCTAATTATGTGGCTGAACACTCGGCTCGTCTTGTGTGTGAGCCCTCAGCGTACCACCATGATGAGCAGAGTCTTGACAGTACAATCATTGAAATGGCCCAGGCTTATGTTGGCAGCAACAACATTAATCTTCTTTTACCAAGAGGTCTATTTGGAAGCCGCCGATTGGGAAGCAAAATCCATGGAAGCGTTCTTCATCTTTCTACTCAACTTTCTCCCATCACAAGGTTCCTTTTTCCAAAGGATGATGACAGGCTTCTTGACTACTTGCATGAAGATGGCAAATCTATTGAGCCAACTTGGTATTTACCAATTATCCCAACGGTTCTTGTTAATGGTAGCGAAGGTGTTGGGCCTGCTGGGTGGATCTCTTACATCCCTAGTTATAACCCAAGAGACATTGTGGAAAACGTGAAGCGTTTGATTAGTGATGATAGAATGGTGCCGATGGATCCTTGGTACAGAGGCTTTACCGGAACTATTGAGAAAACTGTTACAGATTCTGGCGTGTGCTACAGTACTTGTGGGATCATAAAGAAAGAAGATGAGTCAACACTCAGGATTACAGAGCTGCCAATCGGTACTTGCACTAAAGATTATTTGGAATTTCTTGACTCTATCTCGGAAGTGAATGGTGAGACCAAGGATCATTGGATTAAGGATTACGAAGATTTTTCCTACATAGATGTTGATATTCTCATCCACTTGTCTGATACTGTGAAGAACTTGACAGAAGCCAGTGAACAGGATTTGTGTAAGAAGTTTAAACTGAAAAGTAGCAGAAGCATAAGTGACATGCACCTGTTTGATCCAATAGGCGAGATTAAGAGATATGACACTCCAGAACAAATTCTTGAGGAATTTTTTCATCTAAGACTCCAATTCTATGAGAAAAGAAAGACAGTACTATTGCTTATCCTTAGATCGGAGTTGTCAAATTTGGAAAACAAGGTTGCACTGATGCGTGGTGTCTTAGATGGAGGAGTGGTCGACTTCAATAAACTTAGCACTGATCCGTACTTAAAAAGCATGCCACTTACTACGTTTGTCTACAGAGACAGTTATCAAGAAAAGTTGCAAGAATTATTGGCTGATATAGATAGGATCAAACTGAAGATTAAAAAGTTGGAAGGCTCAACTCCGAGGACATTGTGGTTGGAGGAGCTTGCTGCTCTTGAACAGGAACTTGATAAGCTGGAGAAGCAGAAGCTGTTGGAGGAACTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

800

Amino Acids

91.08

Weight (kDa)

4.49

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOPRIM_C	PF16898	236 - 351	8.5e-18	C-terminal associated domain of TOPRIM
DNA_topoisoIV	PF00521	356 - 715	9.6e-80	DNA gyrase/topoisomerase IV, subunit A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13950 AT1G26630 AT1G26630 AT1G69410
fragaria_vesca	FvH4_1g00990 FvH4_4g30601
malus_domestica	MD02G1008000.v1.1 MD13G1067300.v1.1 MD15G1152300.v1.1 MD16G1066400.v1.1
prunus_persica	Prupe.1G280900_v2.0.a1 Prupe.7G262400_v2.0.a1
pyrus_communis	pycom02g00700 pycom13g05920 pycom15g13690 pycom16g05780
rosa_chinensis	RchiOBHm_Chr2g0085721 RchiOBHm_Chr4g0439011
rosa_laevigata	RLG00000006311 RLG00000015714
rosa_multiflora	Rmu_co8316413.1_g000001 Rmu_co8377829.1_g000001 Rmu_sc0009759.1_g000010 Rmu_sc0018732.1_g000002 Rmu_sc0023131.1_g000001
rosa_roxburghii	Rroxscaffold_5G00380020
rosa_rugosa	Rorug01G0462800 Rorug04G0315100
rosa_samantha	Rh4CG391000 Rh4DG371600
rosa_wichuraiana	Rw2G001050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1560
AccB1I	GGYRCC	1 cut(s)	1615
AccI	GTMKAC	4 cut(s)	42, 240, 2163, 2223
AccII	CGCG	1 cut(s)	59
AciI	CCGC	6 cut(s)	5, 30, 57, 59, 129, 1333
AclWI	GGATC	9 cut(s)	603, 1547, 1619, 1632, 1709, 1827, 1976, 2180, 2285
AcoI	YGGCCR	2 cut(s)	565, 650
AcsI	RAATTY	6 cut(s)	305, 536, 1778, 2022, 2033, 2110
AcuI	CTGAAG	1 cut(s)	2306
AcyI	GRCGYC	1 cut(s)	24
AfiI	CCNNNNNNNGG	6 cut(s)	35, 104, 434, 1339, 1398, 2098
AflIII	ACRYGT	1 cut(s)	745
AgsI	TTSAA	7 cut(s)	369, 496, 866, 1096, 1265, 2170, 2351
AjiI	CACGTC	1 cut(s)	288
AjnI	CCWGG	1 cut(s)	1272
Alw26I	GTCTC	5 cut(s)	278, 377, 1563, 1805, 2223
AlwI	GGATC	9 cut(s)	603, 1547, 1619, 1632, 1709, 1827, 1976, 2180, 2285
AlwNI	CAGNNNCTG	3 cut(s)	170, 1676, 2383
AoxI	GGCC	5 cut(s)	565, 650, 813, 1269, 1526
ApeKI	GCWGC	3 cut(s)	1287, 1744, 2342
ApoI	RAATTY	6 cut(s)	305, 536, 1778, 2022, 2033, 2110
AseI	ATTAAT	1 cut(s)	1299
Asp700I	GAANNNNTTC	2 cut(s)	2022, 2037
AspLEI	GCGC	1 cut(s)	321
AspS9I	GGNCC	5 cut(s)	13, 61, 813, 1270, 1526
AsuC2I	CCSGG	3 cut(s)	17, 36, 569
AsuHPI	GGTGA	2 cut(s)	449, 1820
AvaII	GGWCC	2 cut(s)	13, 61
BalI	TGGCCA	1 cut(s)	652
BamHI	GGATCC	1 cut(s)	1624
BanI	GGYRCC	1 cut(s)	1615
BanII	GRGCYC	1 cut(s)	1218
BbsI	GAAGAC	2 cut(s)	207, 515
BbvCI	CCTCAGC	1 cut(s)	1219
BbvI	GCAGC	3 cut(s)	1299, 1731, 2329
BccI	CCATC	7 cut(s)	661, 713, 1082, 1400, 1445, 1615, 2144
BceAI	ACGGC	5 cut(s)	61, 121, 142, 232, 400
BciT130I	CCWGG	1 cut(s)	1274
BclI	TGATCA	2 cut(s)	627, 985
BcnI	CCSGG	3 cut(s)	17, 36, 569
BcoDI	GTCTC	5 cut(s)	278, 377, 1563, 1805, 2223
BfaI	CTAG	4 cut(s)	293, 527, 1554, 2396
BfmI	CTRYAG	2 cut(s)	1687, 2224
BisI	GCNGC	6 cut(s)	57, 130, 1288, 1333, 1745, 2343
BlpI	GCTNAGC	1 cut(s)	684
BlsI	GCNGC	6 cut(s)	58, 131, 1289, 1334, 1746, 2344
BmcAI	AGTACT	2 cut(s)	1693, 2079
Bme1390I	CCNGG	4 cut(s)	17, 36, 569, 1274
Bme18I	GGWCC	2 cut(s)	13, 61
BmgBI	CACGTC	1 cut(s)	288
BmgT120I	GGNCC	5 cut(s)	13, 61, 813, 1270, 1526
BmiI	GGNNCC	4 cut(s)	15, 1403, 1617, 1626
BmrFI	CCNGG	4 cut(s)	17, 36, 569, 1274
BmsI	GCATC	2 cut(s)	988, 2124
BpiI	GAAGAC	2 cut(s)	207, 515
BpmI	CTGGAG	2 cut(s)	1998, 2390
Bpu10I	CCTNAGC	2 cut(s)	133, 1219
Bpu1102I	GCTNAGC	1 cut(s)	684
BpuEI	CTTGAG	2 cut(s)	542, 2048
BpuMI	CCSGG	3 cut(s)	17, 36, 569
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	1 cut(s)	1805
BsaJI	CCNNGG	7 cut(s)	34, 57, 1272, 1354, 1628, 1815, 2315
BsaWI	WCCGGW	1 cut(s)	1646
BsaXI	ACNNNNNCTCC	4 cut(s)	772, 802, 2145, 2175
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 104, 434, 1339, 1398, 2098
Bse1I	ACTGG	3 cut(s)	435, 543, 1911
Bse3DI	GCAATG	2 cut(s)	656, 805
BseBI	CCWGG	1 cut(s)	1274
BseDI	CCNNGG	7 cut(s)	34, 57, 1272, 1354, 1628, 1815, 2315
BseGI	GGATG	4 cut(s)	832, 1423, 1548, 1872
BseLI	CCNNNNNNNGG	6 cut(s)	35, 104, 434, 1339, 1398, 2098
BseMI	GCAATG	2 cut(s)	656, 805
BseMII	CTCAG	7 cut(s)	93, 114, 147, 180, 675, 1233, 1744
BseNI	ACTGG	3 cut(s)	435, 543, 1911
BseRI	GAGGAG	5 cut(s)	134, 687, 1007, 2169, 2348
BseXI	GCAGC	3 cut(s)	1299, 1731, 2329
BseYI	CCCAGC	2 cut(s)	810, 1532
Bsh1236I	CGCG	1 cut(s)	59
BshFI	GGCC	5 cut(s)	567, 652, 815, 1271, 1528
BshNI	GGYRCC	1 cut(s)	1615
BsiSI	CCGG	5 cut(s)	17, 36, 312, 568, 1647
BslFI	GGGAC	2 cut(s)	310, 1151
BslI	CCNNNNNNNGG	6 cut(s)	35, 104, 434, 1339, 1398, 2098
BsmAI	GTCTC	5 cut(s)	278, 377, 1563, 1805, 2223
BsmBI	CGTCTC	1 cut(s)	278
BsmFI	GGGAC	2 cut(s)	310, 1151
BsnI	GGCC	5 cut(s)	567, 652, 815, 1271, 1528
Bso31I	GGTCTC	1 cut(s)	1805
Bsp1286I	GDGCHC	1 cut(s)	1218
Bsp1720I	GCTNAGC	1 cut(s)	684
Bsp19I	CCATGG	1 cut(s)	1354
BspACI	CCGC	6 cut(s)	5, 30, 57, 59, 129, 1333
BspANI	GGCC	5 cut(s)	567, 652, 815, 1271, 1528
BspCNI	CTCAG	7 cut(s)	92, 113, 146, 181, 676, 1232, 1743
BspFNI	CGCG	1 cut(s)	59
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	4 cut(s)	15, 1403, 1617, 1626
BspPI	GGATC	9 cut(s)	603, 1547, 1619, 1632, 1709, 1827, 1976, 2180, 2285
BspT107I	GGYRCC	1 cut(s)	1615
BspTNI	GGTCTC	1 cut(s)	1805
BsrDI	GCAATG	2 cut(s)	656, 805
BsrI	ACTGG	3 cut(s)	435, 543, 1911
BssECI	CCNNGG	7 cut(s)	34, 57, 1272, 1354, 1628, 1815, 2315
BssNI	GRCGYC	1 cut(s)	24
BssT1I	CCWWGG	3 cut(s)	1354, 1628, 1815
Bst2UI	CCWGG	1 cut(s)	1274
Bst4CI	ACNGT	8 cut(s)	419, 1253, 1498, 1666, 1691, 1891, 2077, 2234
Bst6I	CTCTTC	1 cut(s)	261
BstACI	GRCGYC	1 cut(s)	24
BstC8I	GCNNGC	6 cut(s)	463, 933, 1053, 1530, 2204, 2340
BstDSI	CCRYGG	2 cut(s)	57, 1354
BstF5I	GGATG	4 cut(s)	832, 1423, 1548, 1872
BstFNI	CGCG	1 cut(s)	59
BstHHI	GCGC	1 cut(s)	321
BstMAI	GTCTC	5 cut(s)	278, 377, 1563, 1805, 2223
BstMWI	GCNNNNNNNGC	5 cut(s)	135, 308, 658, 1172, 2374
BstNI	CCWGG	1 cut(s)	1274
BstNSI	RCATGY	3 cut(s)	837, 1972, 2206
BstSCI	CCNGG	4 cut(s)	15, 34, 567, 1272
BstSFI	CTRYAG	2 cut(s)	1687, 2224
BstUI	CGCG	1 cut(s)	59
BstV1I	GCAGC	3 cut(s)	1299, 1731, 2329
BstV2I	GAAGAC	2 cut(s)	207, 515
BstX2I	RGATCY	2 cut(s)	1539, 1624
BstYI	RGATCY	2 cut(s)	1539, 1624
BsuRI	GGCC	5 cut(s)	567, 652, 815, 1271, 1528
BtgI	CCRYGG	2 cut(s)	57, 1354
BtgZI	GCGATG	3 cut(s)	37, 153, 294
BtrI	CACGTC	1 cut(s)	288
BtsCI	GGATG	4 cut(s)	832, 1423, 1548, 1872
BtsIMutI	CAGTG	4 cut(s)	428, 1918, 2129, 2181
Cac8I	GCNNGC	6 cut(s)	463, 933, 1053, 1530, 2204, 2340
CaiI	CAGNNNCTG	3 cut(s)	170, 1676, 2383
CciI	TCATGA	1 cut(s)	988
CfoI	GCGC	1 cut(s)	321
Cfr13I	GGNCC	5 cut(s)	13, 61, 813, 1270, 1526
Cfr42I	CCGCGG	1 cut(s)	60
CseI	GACGC	2 cut(s)	32, 194
CspCI	CAANNNNNGTGG	2 cut(s)	787, 822
DraI	TTTAAA	1 cut(s)	1939
EaeI	YGGCCR	2 cut(s)	565, 650
Eam1104I	CTCTTC	1 cut(s)	261
EarI	CTCTTC	1 cut(s)	261
Eco130I	CCWWGG	3 cut(s)	1354, 1628, 1815
Eco24I	GRGCYC	1 cut(s)	1218
Eco31I	GGTCTC	1 cut(s)	1805
Eco47I	GGWCC	2 cut(s)	13, 61
Eco57I	CTGAAG	1 cut(s)	2306
EcoO109I	RGGNCCY	1 cut(s)	13
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	1 cut(s)	1272
EcoT14I	CCWWGG	3 cut(s)	1354, 1628, 1815
EcoT22I	ATGCAT	1 cut(s)	981
EcoT38I	GRGCYC	1 cut(s)	1218
ErhI	CCWWGG	3 cut(s)	1354, 1628, 1815
Esp3I	CGTCTC	1 cut(s)	278
FaqI	GGGAC	2 cut(s)	310, 1151
FauI	CCCGC	1 cut(s)	37
FauNDI	CATATG	1 cut(s)	642
FbaI	TGATCA	2 cut(s)	627, 985
FblI	GTMKAC	4 cut(s)	42, 240, 2163, 2223
Fnu4HI	GCNGC	6 cut(s)	57, 130, 1288, 1333, 1745, 2343
FokI	GGATG	4 cut(s)	839, 1430, 1535, 1859
FriOI	GRGCYC	1 cut(s)	1218
Fsp4HI	GCNGC	6 cut(s)	57, 130, 1288, 1333, 1745, 2343
FspBI	CTAG	4 cut(s)	293, 527, 1554, 2396
GlaI	GCGC	1 cut(s)	320
GluI	GCNGC	6 cut(s)	57, 130, 1288, 1333, 1745, 2343
GsaI	CCCAGC	2 cut(s)	814, 1536
GsuI	CTGGAG	2 cut(s)	1998, 2390
HaeIII	GGCC	5 cut(s)	567, 652, 815, 1271, 1528
HapII	CCGG	5 cut(s)	17, 36, 312, 568, 1647
HgaI	GACGC	2 cut(s)	32, 194
HhaI	GCGC	1 cut(s)	321
Hin1I	GRCGYC	1 cut(s)	24
Hin6I	GCGC	1 cut(s)	319
HinP1I	GCGC	1 cut(s)	319
HincII	GTYRAC	6 cut(s)	43, 241, 363, 1024, 1725, 2164
HindII	GTYRAC	6 cut(s)	43, 241, 363, 1024, 1725, 2164
HindIII	AAGCTT	2 cut(s)	665, 774
HpaII	CCGG	5 cut(s)	17, 36, 312, 568, 1647
HphI	GGTGA	2 cut(s)	449, 1820
Hpy188I	TCNGA	9 cut(s)	82, 103, 262, 489, 518, 1798, 1885, 2101, 2316
HpyAV	CCTTC	7 cut(s)	394, 725, 817, 842, 847, 1511, 2297
HpyCH4III	ACNGT	8 cut(s)	419, 1253, 1498, 1666, 1691, 1891, 2077, 2234
HpyCH4IV	ACGT	6 cut(s)	287, 450, 745, 910, 1584, 2216
HpyF10VI	GCNNNNNNNGC	5 cut(s)	135, 308, 658, 1172, 2374
HpySE526I	ACGT	6 cut(s)	287, 450, 745, 910, 1584, 2216
Hsp92I	GRCGYC	1 cut(s)	24
HspAI	GCGC	1 cut(s)	319
Ksp22I	TGATCA	2 cut(s)	627, 985
KspI	CCGCGG	1 cut(s)	60
LmnI	GCTCC	3 cut(s)	700, 1030, 2335
Lsp1109I	GCAGC	3 cut(s)	1299, 1731, 2329
LweI	GCATC	2 cut(s)	988, 2124
MaeI	CTAG	4 cut(s)	293, 527, 1554, 2396
MaeII	ACGT	6 cut(s)	287, 450, 745, 910, 1584, 2216
MaeIII	GTNAC	5 cut(s)	608, 1003, 1013, 1666, 1964
MfeI	CAATTG	1 cut(s)	924
MflI	RGATCY	2 cut(s)	1539, 1624
MhlI	GDGCHC	1 cut(s)	1218
MlsI	TGGCCA	1 cut(s)	652
MluNI	TGGCCA	1 cut(s)	652
MlyI	GAGTC	7 cut(s)	48, 260, 505, 1252, 1730, 1781, 2043
MmeI	TCCRAC	4 cut(s)	240, 2280, 2310, 2367
Mox20I	TGGCCA	1 cut(s)	652
Mph1103I	ATGCAT	1 cut(s)	981
MroXI	GAANNNNTTC	2 cut(s)	2022, 2037
MscI	TGGCCA	1 cut(s)	652
MseI	TTAA	9 cut(s)	875, 1131, 1299, 1506, 1830, 1938, 1998, 2195, 2292
MslI	CAYNNNNRTG	4 cut(s)	578, 1233, 1265, 1449
Msp20I	TGGCCA	1 cut(s)	652
MspA1I	CMGCKG	1 cut(s)	59
MspI	CCGG	5 cut(s)	17, 36, 312, 568, 1647
MspR9I	CCNGG	4 cut(s)	17, 36, 569, 1274
MssI	GTTTAAAC	1 cut(s)	1939
MunI	CAATTG	1 cut(s)	924
MvaI	CCWGG	1 cut(s)	1274
MvnI	CGCG	1 cut(s)	59
MwoI	GCNNNNNNNGC	5 cut(s)	135, 308, 658, 1172, 2374
NciI	CCSGG	3 cut(s)	17, 36, 569
NcoI	CCATGG	1 cut(s)	1354
NdeI	CATATG	1 cut(s)	642
NlaIV	GGNNCC	4 cut(s)	15, 1403, 1617, 1626
NmeAIII	GCCGAG	1 cut(s)	1175
NmuCI	GTSAC	2 cut(s)	1013, 1964
NsiI	ATGCAT	1 cut(s)	981
NspI	RCATGY	3 cut(s)	837, 1972, 2206
PaeI	GCATGC	1 cut(s)	2206
PagI	TCATGA	1 cut(s)	988
PcsI	WCGNNNNNNNCGW	6 cut(s)	90, 111, 153, 180, 216, 246
PdmI	GAANNNNTTC	2 cut(s)	2022, 2037
PfeI	GAWTC	3 cut(s)	193, 551, 1673
PfoI	TCCNGGA	1 cut(s)	15
PkrI	GCNGC	6 cut(s)	58, 131, 1289, 1334, 1746, 2344
PleI	GAGTC	7 cut(s)	47, 259, 505, 1251, 1729, 1781, 2043
PmeI	GTTTAAAC	1 cut(s)	1939
PpsI	GAGTC	7 cut(s)	47, 259, 505, 1251, 1729, 1781, 2043
PpuMI	RGGWCCY	1 cut(s)	13
PshBI	ATTAAT	1 cut(s)	1299
PsiI	TTATAA	1 cut(s)	1560
Psp5II	RGGWCCY	1 cut(s)	13
Psp6I	CCWGG	1 cut(s)	1272
PspFI	CCCAGC	2 cut(s)	810, 1532
PspGI	CCWGG	1 cut(s)	1272
PspN4I	GGNNCC	4 cut(s)	15, 1403, 1617, 1626
PspPI	GGNCC	5 cut(s)	13, 61, 813, 1270, 1526
PspPPI	RGGWCCY	1 cut(s)	13
PstNI	CAGNNNCTG	3 cut(s)	170, 1676, 2383
PsuI	RGATCY	2 cut(s)	1539, 1624
RseI	CAYNNNNRTG	4 cut(s)	578, 1233, 1265, 1449
SacII	CCGCGG	1 cut(s)	60
SalI	GTCGAC	3 cut(s)	41, 239, 2162
SaqAI	TTAA	9 cut(s)	875, 1131, 1299, 1506, 1830, 1938, 1998, 2195, 2292
SatI	GCNGC	6 cut(s)	57, 130, 1288, 1333, 1745, 2343
Sau96I	GGNCC	5 cut(s)	13, 61, 813, 1270, 1526
ScaI	AGTACT	2 cut(s)	1693, 2079
SchI	GAGTC	7 cut(s)	48, 260, 505, 1252, 1730, 1781, 2043
ScrFI	CCNGG	4 cut(s)	17, 36, 569, 1274
SduI	GDGCHC	1 cut(s)	1218
SfaNI	GCATC	2 cut(s)	988, 2124
SfcI	CTRYAG	2 cut(s)	1687, 2224
Sfr303I	CCGCGG	1 cut(s)	60
SgrBI	CCGCGG	1 cut(s)	60
SinI	GGWCC	2 cut(s)	13, 61
SmiMI	CAYNNNNRTG	4 cut(s)	578, 1233, 1265, 1449
SmlI	CTYRAG	2 cut(s)	521, 2027
SmoI	CTYRAG	2 cut(s)	521, 2027
SphI	GCATGC	1 cut(s)	2206
SsiI	CCGC	6 cut(s)	5, 30, 57, 59, 129, 1333
SspMI	CTAG	4 cut(s)	293, 527, 1554, 2396
StyD4I	CCNGG	4 cut(s)	15, 34, 567, 1272
StyI	CCWWGG	3 cut(s)	1354, 1628, 1815
TaaI	ACNGT	8 cut(s)	419, 1253, 1498, 1666, 1691, 1891, 2077, 2234
TaiI	ACGT	6 cut(s)	290, 453, 748, 913, 1587, 2219
TaqI	TCGA	6 cut(s)	42, 66, 156, 240, 471, 2163
TatI	WGTACW	4 cut(s)	335, 1253, 1691, 2077
TauI	GCSGC	3 cut(s)	59, 132, 1335
TfiI	GAWTC	3 cut(s)	193, 551, 1673
Tru1I	TTAA	9 cut(s)	875, 1131, 1299, 1506, 1830, 1938, 1998, 2195, 2292
Tru9I	TTAA	9 cut(s)	875, 1131, 1299, 1506, 1830, 1938, 1998, 2195, 2292
TscAI	CASTG	4 cut(s)	435, 1918, 2136, 2188
TseFI	GTSAC	2 cut(s)	1013, 1964
TseI	GCWGC	3 cut(s)	1287, 1744, 2342
Tsp45I	GTSAC	2 cut(s)	1013, 1964
TspGWI	ACGGA	3 cut(s)	660, 1065, 2178
TspRI	CASTG	4 cut(s)	435, 1918, 2136, 2188
VpaK11BI	GGWCC	2 cut(s)	13, 61
VspI	ATTAAT	1 cut(s)	1299
XapI	RAATTY	6 cut(s)	305, 536, 1778, 2022, 2033, 2110
XceI	RCATGY	3 cut(s)	837, 1972, 2206
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1280
XmiI	GTMKAC	4 cut(s)	42, 240, 2163, 2223
XmnI	GAANNNNTTC	2 cut(s)	2022, 2037
XspI	CTAG	4 cut(s)	293, 527, 1554, 2396
ZrmI	AGTACT	2 cut(s)	1693, 2079
Zsp2I	ATGCAT	1 cut(s)	981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.