AT2G26040

Abscisic acid receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0015132
Physical Location & Seq
Reverse (-)
11094258 .. 11095542
1285 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26040.1

Sequence Viewer

Length: 573 bp
ATGAGCTCATCCCCGGCCGTGAAAGGCCTAACCGATGAAGAGCAGAAAACCCTCGAACCGGTTATCAAAACGTACCACCAGTTCGAACCAGACCCAACCACGTGCACTTCTCTCATAACCCAACGCATCCACGCTCCGGCCTCCGTGGTTTGGCCTCTTATCCGCCGCTTCGACAACCCCGAACGCTACAAACACTTTGTAAAAAGGTGCCGTCTCATCTCCGGTGATGGTGACGTCGGAAGCGTCAGAGAAGTGACCGTAATCTCCGGCCTCCCAGCCTCAACCAGTACCGAGCGGCTTGAGTTCGTCGATGACGACCACCGTGTTCTAAGCTTCAGGGTCGTCGGCGGAGAGCACCGACTCAAGAACTACAAATCAGTGACGTCGGTCAATGAGTTCTTGAATCAAGATTCCGGCAAGGTTTACACGGTGGTTCTTGAATCTTACACCGTTGATATTCCCGAGGGAAACACAGAGGAAGACACTAAAATGTTTGTGGACACTGTCGTCAAACTCAACCTTCAGAAACTCGGAGTTGCCGCCACATCTGCACCTATGCATGATGATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008289 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009892 GO:0009987 GO:0010033 GO:0010035 GO:0010427 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019840 GO:0019888 GO:0023052 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031406 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0032870 GO:0033293 GO:0033993 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0036094 GO:0038023 GO:0042221 GO:0042562 GO:0042802 GO:0042803 GO:0043086 GO:0043167 GO:0043168 GO:0043177 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:0098772 GO:1901700 GO:1901701 GO:1905183
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
Polyketide_cyc2

Protein Analysis

190

Amino Acids

21.28

Weight (kDa)

5.4

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Polyketide_cyc2 PF10604 40 - 177 3.6e-15 Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc PF03364 43 - 175 3.2e-06 Polyketide cyclase / dehydrase and lipid transport
Bet_v_1 PF00407 62 - 140 6.8e-08 Pathogenesis-related protein Bet v 1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015132)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26040
fragaria_vesca FvH4_2g32040
malus_domestica MD08G1043500.v1.1 MD15G1060800.v1.1
prunus_persica Prupe.1G413500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0310701
rosa_laevigata RLG00000010464
rosa_multiflora Rmu_co8327855.1_g000001 Rmu_sc0001638.1_g000005
rosa_roxburghii Rroxscaffold_7G00158340
rosa_rugosa Rorug06G0382500
rosa_samantha Rh6AG496400 Rh6BG506200 Rh6CG511800 Rh6DG497600
rosa_wichuraiana Rw6G043170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 506
AatII GACGTC 2 cut(s) 237, 386
AccB1I GGYRCC 1 cut(s) 207
AccBSI CCGCTC 1 cut(s) 295
AciI CCGC 5 cut(s) 163, 166, 295, 348, 540
AcoI YGGCCR 1 cut(s) 15
AcuI CTGAAG 2 cut(s) 319, 506
AcvI CACGTG 1 cut(s) 102
AcyI GRCGYC 2 cut(s) 234, 383
AfaI GTAC 2 cut(s) 74, 289
AfiI CCNNNNNNNGG 3 cut(s) 58, 136, 150
AgeI ACCGGT 1 cut(s) 58
AgsI TTSAA 2 cut(s) 403, 440
AluBI AGCT 2 cut(s) 6, 333
AluI AGCT 2 cut(s) 6, 333
Alw21I GWGCWC 3 cut(s) 8, 107, 357
Alw26I GTCTC 1 cut(s) 218
Alw44I GTGCAC 1 cut(s) 103
Ama87I CYCGRG 1 cut(s) 461
AoxI GGCC 5 cut(s) 15, 25, 138, 152, 268
ApaLI GTGCAC 1 cut(s) 103
AsiGI ACCGGT 1 cut(s) 58
AsuC2I CCSGG 1 cut(s) 14
AsuHPI GGTGA 2 cut(s) 236, 242
AsuII TTCGAA 1 cut(s) 84
AvaI CYCGRG 1 cut(s) 461
BaeGI GKGCMC 1 cut(s) 107
BanI GGYRCC 1 cut(s) 207
BanII GRGCYC 1 cut(s) 8
BbrPI CACGTG 1 cut(s) 102
BbsI GAAGAC 1 cut(s) 486
Bbv12I GWGCWC 3 cut(s) 8, 107, 357
BccI CCATC 1 cut(s) 221
BceAI ACGGC 2 cut(s) 2, 195
BcnI CCSGG 1 cut(s) 14
BcoDI GTCTC 1 cut(s) 218
BisI GCNGC 3 cut(s) 166, 296, 540
BlsI GCNGC 3 cut(s) 167, 297, 541
Bme1390I CCNGG 1 cut(s) 14
BmeT110I CYCGRG 1 cut(s) 461
BmiI GGNNCC 1 cut(s) 209
BmrFI CCNGG 1 cut(s) 14
BmsI GCATC 1 cut(s) 135
BoxI GACNNNNGTC 1 cut(s) 386
BpiI GAAGAC 1 cut(s) 486
Bpu14I TTCGAA 1 cut(s) 84
BpuEI CTTGAG 2 cut(s) 320, 347
BpuMI CCSGG 1 cut(s) 14
BsaAI YACGTR 1 cut(s) 102
BsaHI GRCGYC 2 cut(s) 234, 383
BsaJI CCNNGG 3 cut(s) 12, 144, 462
BsaWI WCCGGW 2 cut(s) 58, 221
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 136, 150
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 2 cut(s) 79, 285
BseDI CCNNGG 3 cut(s) 12, 144, 462
BseGI GGATG 2 cut(s) 8, 126
BseLI CCNNNNNNNGG 3 cut(s) 58, 136, 150
BseNI ACTGG 2 cut(s) 79, 285
BseSI GKGCMC 1 cut(s) 107
BseX3I CGGCCG 1 cut(s) 15
BseYI CCCAGC 1 cut(s) 274
BsgI GTGCAG 1 cut(s) 534
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 5 cut(s) 17, 27, 140, 154, 270
BshNI GGYRCC 1 cut(s) 207
BshTI ACCGGT 1 cut(s) 58
BsiEI CGRYCG 1 cut(s) 18
BsiHKAI GWGCWC 3 cut(s) 8, 107, 357
BsiHKCI CYCGRG 1 cut(s) 461
BsiSI CCGG 6 cut(s) 14, 59, 137, 222, 267, 414
BslI CCNNNNNNNGG 3 cut(s) 58, 136, 150
BsmAI GTCTC 1 cut(s) 218
BsmBI CGTCTC 1 cut(s) 218
BsnI GGCC 5 cut(s) 17, 27, 140, 154, 270
BsoBI CYCGRG 1 cut(s) 461
Bsp119I TTCGAA 1 cut(s) 84
Bsp1286I GDGCHC 3 cut(s) 8, 107, 357
BspACI CCGC 5 cut(s) 163, 166, 295, 348, 540
BspANI GGCC 5 cut(s) 17, 27, 140, 154, 270
BspLI GGNNCC 1 cut(s) 209
BspQI GCTCTTC 1 cut(s) 33
BspT104I TTCGAA 1 cut(s) 84
BspT107I GGYRCC 1 cut(s) 207
BsrBI CCGCTC 1 cut(s) 295
BsrFI RCCGGY 1 cut(s) 58
BsrI ACTGG 2 cut(s) 79, 285
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 3 cut(s) 12, 144, 462
BssNI GRCGYC 2 cut(s) 234, 383
Bst4CI ACNGT 5 cut(s) 259, 323, 430, 451, 505
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 2 cut(s) 234, 383
BstBAI YACGTR 1 cut(s) 102
BstBI TTCGAA 1 cut(s) 84
BstDEI CTNAG 1 cut(s) 329
BstDSI CCRYGG 1 cut(s) 144
BstF5I GGATG 2 cut(s) 8, 126
BstMAI GTCTC 1 cut(s) 218
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 1 cut(s) 548
BstPAI GACNNNNGTC 1 cut(s) 386
BstSCI CCNGG 1 cut(s) 12
BstSLI GKGCMC 1 cut(s) 107
BstV2I GAAGAC 1 cut(s) 486
BstZI CGGCCG 1 cut(s) 15
BsuRI GGCC 5 cut(s) 17, 27, 140, 154, 270
BtgI CCRYGG 1 cut(s) 144
BtsCI GGATG 2 cut(s) 8, 126
BtsIMutI CAGTG 2 cut(s) 384, 501
Cfr10I RCCGGY 1 cut(s) 58
CseI GACGC 1 cut(s) 232
Csp6I GTAC 2 cut(s) 73, 288
CspAI ACCGGT 1 cut(s) 58
CviAII CATG 1 cut(s) 560
CviJI RGCY 9 cut(s) 6, 17, 27, 140, 154, 270, 278, 298, 333
CviKI_1 RGCY 9 cut(s) 6, 17, 27, 140, 154, 270, 278, 298, 333
CviQI GTAC 2 cut(s) 73, 288
DdeI CTNAG 1 cut(s) 329
DrdI GACNNNNNNGTC 1 cut(s) 506
DseDI GACNNNNNNGTC 1 cut(s) 506
EaeI YGGCCR 1 cut(s) 15
EagI CGGCCG 1 cut(s) 15
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
EciI GGCGGA 2 cut(s) 152, 363
Ecl136II GAGCTC 1 cut(s) 6
EclXI CGGCCG 1 cut(s) 15
Eco147I AGGCCT 1 cut(s) 27
Eco24I GRGCYC 1 cut(s) 8
Eco52I CGGCCG 1 cut(s) 15
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 2 cut(s) 319, 506
Eco72I CACGTG 1 cut(s) 102
Eco88I CYCGRG 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 6
EcoT22I ATGCAT 1 cut(s) 561
EcoT38I GRGCYC 1 cut(s) 8
Esp3I CGTCTC 1 cut(s) 218
FaeI CATG 1 cut(s) 563
FaiI YATR 3 cut(s) 116, 557, 561
FatI CATG 1 cut(s) 559
Fnu4HI GCNGC 3 cut(s) 166, 296, 540
FokI GGATG 1 cut(s) 113
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 3 cut(s) 166, 296, 540
GluI GCNGC 3 cut(s) 166, 296, 540
GsaI CCCAGC 1 cut(s) 278
HaeIII GGCC 5 cut(s) 17, 27, 140, 154, 270
HapII CCGG 6 cut(s) 14, 59, 137, 222, 267, 414
HgaI GACGC 1 cut(s) 232
Hin1I GRCGYC 2 cut(s) 234, 383
Hin1II CATG 1 cut(s) 563
HindIII AAGCTT 1 cut(s) 331
HinfI GANTC 4 cut(s) 360, 403, 410, 440
HpaII CCGG 6 cut(s) 14, 59, 137, 222, 267, 414
HphI GGTGA 2 cut(s) 236, 242
Hpy166II GTNNAC 3 cut(s) 105, 424, 499
Hpy188I TCNGA 4 cut(s) 239, 248, 525, 533
Hpy188III TCNNGA 5 cut(s) 364, 400, 407, 437, 461
Hpy8I GTNNAC 3 cut(s) 105, 424, 499
Hpy99I CGWCG 4 cut(s) 239, 311, 347, 388
HpyAV CCTTC 1 cut(s) 530
HpyCH4III ACNGT 5 cut(s) 259, 323, 430, 451, 505
HpyCH4IV ACGT 4 cut(s) 71, 101, 234, 383
HpyCH4V TGCA 3 cut(s) 105, 551, 559
HpyF10VI GCNNNNNNNGC 1 cut(s) 548
HpyF3I CTNAG 1 cut(s) 329
HpySE526I ACGT 4 cut(s) 71, 101, 234, 383
Hsp92I GRCGYC 2 cut(s) 234, 383
Hsp92II CATG 1 cut(s) 563
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 1 cut(s) 139
LweI GCATC 1 cut(s) 135
MaeII ACGT 4 cut(s) 71, 101, 234, 383
MaeIII GTNAC 3 cut(s) 230, 253, 379
MbiI CCGCTC 1 cut(s) 295
MboII GAAGA 2 cut(s) 50, 491
MhlI GDGCHC 3 cut(s) 8, 107, 357
MlyI GAGTC 1 cut(s) 354
MmeI TCCRAC 1 cut(s) 217
MnlI CCTC 7 cut(s) 62, 151, 165, 281, 289, 457, 469
Mph1103I ATGCAT 1 cut(s) 561
MslI CAYNNNNRTG 2 cut(s) 488, 564
MspI CCGG 6 cut(s) 14, 59, 137, 222, 267, 414
MspR9I CCNGG 1 cut(s) 14
MwoI GCNNNNNNNGC 1 cut(s) 548
NciI CCSGG 1 cut(s) 14
NlaIII CATG 1 cut(s) 563
NlaIV GGNNCC 1 cut(s) 209
NmuCI GTSAC 3 cut(s) 230, 253, 379
NsiI ATGCAT 1 cut(s) 561
NspV TTCGAA 1 cut(s) 84
PceI AGGCCT 1 cut(s) 27
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 3 cut(s) 177, 240, 312
PfeI GAWTC 3 cut(s) 403, 410, 440
PflFI GACNNNGTC 1 cut(s) 503
PinAI ACCGGT 1 cut(s) 58
PkrI GCNGC 3 cut(s) 167, 297, 541
PleI GAGTC 1 cut(s) 354
PmaCI CACGTG 1 cut(s) 102
PmlI CACGTG 1 cut(s) 102
PpsI GAGTC 1 cut(s) 354
Ppu21I YACGTR 1 cut(s) 102
PshAI GACNNNNGTC 1 cut(s) 386
Psp124BI GAGCTC 1 cut(s) 8
PspCI CACGTG 1 cut(s) 102
PspFI CCCAGC 1 cut(s) 274
PspN4I GGNNCC 1 cut(s) 209
PsrI GAACNNNNNNTAC 2 cut(s) 65, 97
PsyI GACNNNGTC 1 cut(s) 503
RsaI GTAC 2 cut(s) 74, 289
RsaNI GTAC 2 cut(s) 73, 288
RseI CAYNNNNRTG 2 cut(s) 488, 564
SacI GAGCTC 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 33
SatI GCNGC 3 cut(s) 166, 296, 540
SchI GAGTC 1 cut(s) 354
ScrFI CCNGG 1 cut(s) 14
SduI GDGCHC 3 cut(s) 8, 107, 357
SfaNI GCATC 1 cut(s) 135
SfuI TTCGAA 1 cut(s) 84
SmiMI CAYNNNNRTG 2 cut(s) 488, 564
SmlI CTYRAG 2 cut(s) 299, 362
SmoI CTYRAG 2 cut(s) 299, 362
SseBI AGGCCT 1 cut(s) 27
SsiI CCGC 5 cut(s) 163, 166, 295, 348, 540
SstI GAGCTC 1 cut(s) 8
StuI AGGCCT 1 cut(s) 27
StyD4I CCNGG 1 cut(s) 12
TaaI ACNGT 5 cut(s) 259, 323, 430, 451, 505
TaiI ACGT 4 cut(s) 74, 104, 237, 386
TaqI TCGA 4 cut(s) 54, 84, 171, 309
TaqII GACCGA 1 cut(s) 376
TauI GCSGC 3 cut(s) 168, 298, 542
TfiI GAWTC 3 cut(s) 403, 410, 440
TscAI CASTG 2 cut(s) 384, 508
TseFI GTSAC 3 cut(s) 230, 253, 379
Tsp45I GTSAC 3 cut(s) 230, 253, 379
TspDTI ATGAA 1 cut(s) 51
TspGWI ACGGA 1 cut(s) 133
TspRI CASTG 2 cut(s) 384, 508
Tth111I GACNNNGTC 1 cut(s) 503
VneI GTGCAC 1 cut(s) 103
ZraI GACGTC 2 cut(s) 235, 384
Zsp2I ATGCAT 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.