Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015132

Physical Location & Seq

Genomic Coordinates Forward (+)

36028970 .. 36030115

Gene Structure 1146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G413500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 600 bp

ATGGATGCTAGCCGAGCTCCACCATATGGCCTAACCCAAGAGGAGTTTGCAGAGGTAGAGAGCCTCATCAAAACCTACCACAAATTCGAGCCGTCGCCAAACACATGCACGTCGCTAATAGCACAGAAAATCGACGCCCCGGCCAGCCACGTCTGGCCTCTGGTTCGAAGCTTCGACAACCCGCAAAAATACAAGCACTTCATCAAAAGCTGCAACATGAAAGGTGACGGCGGCGTCGGGAGCATAAGGGAGGTGACCGTGGTTTCGGGGCTTCCGGCCTCCACGAGCACCGAGAGGCTCGAGATTTTGGACGACGAGAAGCACATAATTAGCTTTAGGGTTGTGGGAGGCGAACACAGGCTGAACAATTACAGGTCGGTTACTTCGGTTACTGAGTTCGTTGATGGCAGAGACGGGGTGAGTGATCAGGTGTACTCGATTGTATTGGAGTCTTATATTGTGGACATACCAGAAGGCAACACTGGGGAAGATACGAAGATGTTTGTGGACACTGTGATCAAGTTGAACCTGCAGAAGCTTGGGGTGGTGGCTATGAATTCTGCGCACGGCATTGGAGGACAGGAAATTGAAGAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008289 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009892 GO:0009987 GO:0010033 GO:0010035 GO:0010427 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0019220 GO:0019222 GO:0019840 GO:0023052 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031406 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0032870 GO:0033293 GO:0033993 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0036094 GO:0042221 GO:0042562 GO:0042802 GO:0042803 GO:0043086 GO:0043167 GO:0043168 GO:0043177 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:1901700 GO:1901701 GO:1905183

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Polyketide_cyc2

Protein Analysis

200

Amino Acids

21.9

Weight (kDa)

5.04

Isoelectric Point (pI)

39.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26040
fragaria_vesca	FvH4_2g32040
malus_domestica	MD08G1043500.v1.1 MD15G1060800.v1.1
prunus_persica	Prupe.1G413500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0310701
rosa_laevigata	RLG00000010464
rosa_multiflora	Rmu_co8327855.1_g000001 Rmu_sc0001638.1_g000005
rosa_roxburghii	Rroxscaffold_7G00158340
rosa_rugosa	Rorug06G0382500
rosa_samantha	Rh6AG496400 Rh6BG506200 Rh6CG511800 Rh6DG497600
rosa_wichuraiana	Rw6G043170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	233
Acc16I	TGCGCA	1 cut(s)	564
Acc36I	ACCTGC	1 cut(s)	537
AccB7I	CCANNNNNTGG	1 cut(s)	26
AciI	CCGC	2 cut(s)	182, 231
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	2 cut(s)	83, 556
AcyI	GRCGYC	2 cut(s)	135, 234
AfaI	GTAC	1 cut(s)	434
AfiI	CCNNNNNNNGG	1 cut(s)	26
AgsI	TTSAA	2 cut(s)	526, 590
AjiI	CACGTC	2 cut(s)	111, 151
AluBI	AGCT	5 cut(s)	17, 171, 210, 333, 538
AluI	AGCT	5 cut(s)	17, 171, 210, 333, 538
Alw21I	GWGCWC	2 cut(s)	19, 290
Alw26I	GTCTC	1 cut(s)	405
Ama87I	CYCGRG	1 cut(s)	299
AoxI	GGCC	4 cut(s)	28, 141, 155, 276
ApeKI	GCWGC	1 cut(s)	210
ApoI	RAATTY	2 cut(s)	83, 556
ArsI	GACNNNNNNTTYG	2 cut(s)	247, 279
AspLEI	GCGC	1 cut(s)	565
AsuC2I	CCSGG	1 cut(s)	140
AsuHPI	GGTGA	3 cut(s)	236, 265, 430
AsuII	TTCGAA	1 cut(s)	166
AsuNHI	GCTAGC	1 cut(s)	8
AvaI	CYCGRG	1 cut(s)	299
BanII	GRGCYC	1 cut(s)	19
BauI	CACGAG	1 cut(s)	283
Bbv12I	GWGCWC	2 cut(s)	19, 290
BbvI	GCAGC	1 cut(s)	197
BccI	CCATC	1 cut(s)	398
BceAI	ACGGC	3 cut(s)	76, 244, 583
BclI	TGATCA	2 cut(s)	424, 516
BcnI	CCSGG	1 cut(s)	140
BcoDI	GTCTC	1 cut(s)	405
BfaI	CTAG	1 cut(s)	9
BfmI	CTRYAG	1 cut(s)	530
BfuAI	ACCTGC	1 cut(s)	537
BisI	GCNGC	2 cut(s)	211, 232
BlsI	GCNGC	2 cut(s)	212, 233
Bme1390I	CCNGG	1 cut(s)	140
BmeT110I	CYCGRG	1 cut(s)	299
BmgBI	CACGTC	2 cut(s)	111, 151
BmrFI	CCNGG	1 cut(s)	140
BmrI	ACTGGG	1 cut(s)	492
BmtI	GCTAGC	1 cut(s)	12
BmuI	ACTGGG	1 cut(s)	492
Bpu14I	TTCGAA	1 cut(s)	166
BpuMI	CCSGG	1 cut(s)	140
BsaHI	GRCGYC	2 cut(s)	135, 234
BsaJI	CCNNGG	2 cut(s)	138, 258
Bsc4I	CCNNNNNNNGG	1 cut(s)	26
Bse1I	ACTGG	1 cut(s)	487
BseDI	CCNNGG	2 cut(s)	138, 258
BseGI	GGATG	1 cut(s)	10
BseLI	CCNNNNNNNGG	1 cut(s)	26
BseMII	CTCAG	1 cut(s)	384
BseNI	ACTGG	1 cut(s)	487
BseRI	GAGGAG	1 cut(s)	56
BseXI	GCAGC	1 cut(s)	197
BshFI	GGCC	4 cut(s)	30, 143, 157, 278
BsiHKAI	GWGCWC	2 cut(s)	19, 290
BsiHKCI	CYCGRG	1 cut(s)	299
BsiSI	CCGG	2 cut(s)	140, 275
BslI	CCNNNNNNNGG	1 cut(s)	26
BsmAI	GTCTC	1 cut(s)	405
BsmBI	CGTCTC	1 cut(s)	405
BsnI	GGCC	4 cut(s)	30, 143, 157, 278
BsoBI	CYCGRG	1 cut(s)	299
Bsp119I	TTCGAA	1 cut(s)	166
Bsp1286I	GDGCHC	2 cut(s)	19, 290
Bsp143I	GATC	2 cut(s)	424, 516
BspACI	CCGC	2 cut(s)	182, 231
BspANI	GGCC	4 cut(s)	30, 143, 157, 278
BspCNI	CTCAG	1 cut(s)	385
BspMAI	CTGCAG	1 cut(s)	534
BspMI	ACCTGC	1 cut(s)	537
BspOI	GCTAGC	1 cut(s)	12
BspT104I	TTCGAA	1 cut(s)	166
BsrI	ACTGG	1 cut(s)	487
BssECI	CCNNGG	2 cut(s)	138, 258
BssMI	GATC	2 cut(s)	424, 516
BssNI	GRCGYC	2 cut(s)	135, 234
BssSI	CACGAG	1 cut(s)	283
Bst2BI	CACGAG	1 cut(s)	283
Bst4CI	ACNGT	2 cut(s)	259, 514
BstACI	GRCGYC	2 cut(s)	135, 234
BstBI	TTCGAA	1 cut(s)	166
BstC8I	GCNNGC	2 cut(s)	10, 145
BstDEI	CTNAG	1 cut(s)	393
BstDSI	CCRYGG	1 cut(s)	258
BstEII	GGTNACC	1 cut(s)	253
BstF5I	GGATG	1 cut(s)	10
BstHHI	GCGC	1 cut(s)	565
BstKTI	GATC	2 cut(s)	427, 519
BstMAI	GTCTC	1 cut(s)	405
BstMBI	GATC	2 cut(s)	424, 516
BstMWI	GCNNNNNNNGC	2 cut(s)	14, 240
BstNSI	RCATGY	1 cut(s)	108
BstPI	GGTNACC	1 cut(s)	253
BstSCI	CCNGG	1 cut(s)	138
BstSFI	CTRYAG	1 cut(s)	530
BstV1I	GCAGC	1 cut(s)	197
BsuRI	GGCC	4 cut(s)	30, 143, 157, 278
BtgI	CCRYGG	1 cut(s)	258
BtrI	CACGTC	2 cut(s)	111, 151
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	2 cut(s)	480, 510
BveI	ACCTGC	1 cut(s)	537
Cac8I	GCNNGC	2 cut(s)	10, 145
CfoI	GCGC	1 cut(s)	565
CseI	GACGC	2 cut(s)	143, 223
Csp6I	GTAC	1 cut(s)	433
CviAII	CATG	2 cut(s)	105, 217
CviQI	GTAC	1 cut(s)	433
DdeI	CTNAG	1 cut(s)	393
DpnI	GATC	2 cut(s)	426, 518
DpnII	GATC	2 cut(s)	424, 516
DrdI	GACNNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	233
EaeI	YGGCCR	1 cut(s)	141
Ecl136II	GAGCTC	1 cut(s)	17
Eco24I	GRGCYC	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	17
Eco88I	CYCGRG	1 cut(s)	299
Eco91I	GGTNACC	1 cut(s)	253
EcoICRI	GAGCTC	1 cut(s)	17
EcoO65I	GGTNACC	1 cut(s)	253
EcoRI	GAATTC	1 cut(s)	556
EcoT38I	GRGCYC	1 cut(s)	19
Esp3I	CGTCTC	1 cut(s)	405
FaeI	CATG	2 cut(s)	108, 220
FaiI	YATR	9 cut(s)	25, 27, 106, 218, 245, 326, 456, 467, 554
FatI	CATG	2 cut(s)	104, 216
FauI	CCCGC	1 cut(s)	189
FauNDI	CATATG	1 cut(s)	25
FbaI	TGATCA	2 cut(s)	424, 516
Fnu4HI	GCNGC	2 cut(s)	211, 232
FokI	GGATG	1 cut(s)	17
FriOI	GRGCYC	1 cut(s)	19
Fsp4HI	GCNGC	2 cut(s)	211, 232
FspBI	CTAG	1 cut(s)	9
FspI	TGCGCA	1 cut(s)	564
GlaI	GCGC	1 cut(s)	564
GluI	GCNGC	2 cut(s)	211, 232
HaeIII	GGCC	4 cut(s)	30, 143, 157, 278
HapII	CCGG	2 cut(s)	140, 275
HgaI	GACGC	2 cut(s)	143, 223
HhaI	GCGC	1 cut(s)	565
Hin1I	GRCGYC	2 cut(s)	135, 234
Hin1II	CATG	2 cut(s)	108, 220
Hin6I	GCGC	1 cut(s)	563
HinP1I	GCGC	1 cut(s)	563
HindIII	AAGCTT	2 cut(s)	169, 536
HinfI	GANTC	2 cut(s)	449, 593
HpaII	CCGG	2 cut(s)	140, 275
HphI	GGTGA	3 cut(s)	236, 265, 430
Hpy166II	GTNNAC	3 cut(s)	433, 463, 508
Hpy188III	TCNNGA	3 cut(s)	238, 301, 597
Hpy8I	GTNNAC	3 cut(s)	433, 463, 508
Hpy99I	CGWCG	5 cut(s)	97, 115, 137, 239, 317
HpyAV	CCTTC	1 cut(s)	467
HpyCH4III	ACNGT	2 cut(s)	259, 514
HpyCH4IV	ACGT	2 cut(s)	110, 150
HpyCH4V	TGCA	4 cut(s)	50, 108, 213, 532
HpyF10VI	GCNNNNNNNGC	2 cut(s)	14, 240
HpyF3I	CTNAG	1 cut(s)	393
HpySE526I	ACGT	2 cut(s)	110, 150
Hsp92I	GRCGYC	2 cut(s)	135, 234
Hsp92II	CATG	2 cut(s)	108, 220
HspAI	GCGC	1 cut(s)	563
Ksp22I	TGATCA	2 cut(s)	424, 516
Kzo9I	GATC	2 cut(s)	424, 516
LmnI	GCTCC	2 cut(s)	22, 240
Lsp1109I	GCAGC	1 cut(s)	197
MaeI	CTAG	1 cut(s)	9
MaeII	ACGT	2 cut(s)	110, 150
MaeIII	GTNAC	4 cut(s)	224, 253, 379, 388
MalI	GATC	2 cut(s)	426, 518
MboI	GATC	2 cut(s)	424, 516
MboII	GAAGA	2 cut(s)	500, 508
MhlI	GDGCHC	2 cut(s)	19, 290
MluCI	AATT	5 cut(s)	83, 327, 367, 556, 585
MlyI	GAGTC	1 cut(s)	458
MnlI	CCTC	9 cut(s)	34, 46, 74, 168, 244, 288, 289, 341, 569
MspI	CCGG	2 cut(s)	140, 275
MspR9I	CCNGG	1 cut(s)	140
MwoI	GCNNNNNNNGC	2 cut(s)	14, 240
NciI	CCSGG	1 cut(s)	140
NdeI	CATATG	1 cut(s)	25
NdeII	GATC	2 cut(s)	424, 516
NheI	GCTAGC	1 cut(s)	8
NlaIII	CATG	2 cut(s)	108, 220
NmeAIII	GCCGAG	1 cut(s)	38
NmuCI	GTSAC	2 cut(s)	224, 253
NsbI	TGCGCA	1 cut(s)	564
NspI	RCATGY	1 cut(s)	108
NspV	TTCGAA	1 cut(s)	166
PaeR7I	CTCGAG	1 cut(s)	299
PfeI	GAWTC	1 cut(s)	593
PflMI	CCANNNNNTGG	1 cut(s)	26
PkrI	GCNGC	2 cut(s)	212, 233
PleI	GAGTC	1 cut(s)	457
PpsI	GAGTC	1 cut(s)	457
Psp124BI	GAGCTC	1 cut(s)	19
PspEI	GGTNACC	1 cut(s)	253
PstI	CTGCAG	1 cut(s)	534
RsaI	GTAC	1 cut(s)	434
RsaNI	GTAC	1 cut(s)	433
SacI	GAGCTC	1 cut(s)	19
SatI	GCNGC	2 cut(s)	211, 232
Sau3AI	GATC	2 cut(s)	424, 516
SchI	GAGTC	1 cut(s)	458
ScrFI	CCNGG	1 cut(s)	140
SduI	GDGCHC	2 cut(s)	19, 290
SfcI	CTRYAG	1 cut(s)	530
Sfr274I	CTCGAG	1 cut(s)	299
SfuI	TTCGAA	1 cut(s)	166
SlaI	CTCGAG	1 cut(s)	299
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
Sse9I	AATT	5 cut(s)	83, 327, 367, 556, 585
SsiI	CCGC	2 cut(s)	182, 231
SspMI	CTAG	1 cut(s)	9
SstI	GAGCTC	1 cut(s)	19
StyD4I	CCNGG	1 cut(s)	138
TaaI	ACNGT	2 cut(s)	259, 514
TaiI	ACGT	2 cut(s)	113, 153
TaqI	TCGA	6 cut(s)	87, 132, 166, 174, 300, 437
TasI	AATT	5 cut(s)	83, 327, 367, 556, 585
TatI	WGTACW	1 cut(s)	432
TauI	GCSGC	1 cut(s)	234
TfiI	GAWTC	1 cut(s)	593
TscAI	CASTG	2 cut(s)	487, 517
TseFI	GTSAC	2 cut(s)	224, 253
TseI	GCWGC	1 cut(s)	210
Tsp45I	GTSAC	2 cut(s)	224, 253
TspDTI	ATGAA	3 cut(s)	190, 233, 569
TspRI	CASTG	2 cut(s)	487, 517
Van91I	CCANNNNNTGG	1 cut(s)	26
XapI	RAATTY	2 cut(s)	83, 556
XceI	RCATGY	1 cut(s)	108
XhoI	CTCGAG	1 cut(s)	299
XspI	CTAG	1 cut(s)	9

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.