Pectinesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26450 AT4G33230 |
| fragaria_vesca | FvH4_1g09571 |
| malus_domestica | MD02G1104300.v1.1 MD15G1224600.v1.1 |
| prunus_persica | Prupe.7G190500_v2.0.a1 |
| rosa_laevigata | RLG00000016639 |
| rosa_multiflora | Rmu_sc0004244.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00145660 |
| rosa_rugosa | Rorug02G0057900 |
| rosa_samantha | Rh2AG104600 Rh2BG106800 Rh2CG108600 Rh2DG107700 |
| rosa_wichuraiana | Rw2G008080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1439 |
| AccII | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| AccIII | TCCGGA | 1 cut(s) | 1188 |
| AciI | CCGC | 8 cut(s) | 204, 210, 285, 650, 1123, 1371, 1437, 1673 |
| AclI | AACGTT | 1 cut(s) | 1142 |
| AclWI | GGATC | 5 cut(s) | 19, 80, 1081, 1699, 1805 |
| AcoI | YGGCCR | 1 cut(s) | 912 |
| AcsI | RAATTY | 1 cut(s) | 59 |
| AcuI | CTGAAG | 1 cut(s) | 729 |
| AfaI | GTAC | 5 cut(s) | 989, 1482, 1535, 1667, 1679 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 311, 841, 1195 |
| AflII | CTTAAG | 1 cut(s) | 1514 |
| AflIII | ACRYGT | 3 cut(s) | 34, 1231, 1659 |
| AgeI | ACCGGT | 1 cut(s) | 1094 |
| AgsI | TTSAA | 8 cut(s) | 345, 430, 443, 689, 895, 1274, 1713, 1762 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 835 |
| AjnI | CCWGG | 4 cut(s) | 504, 630, 1414, 1726 |
| AluBI | AGCT | 4 cut(s) | 128, 446, 609, 1542 |
| AluI | AGCT | 4 cut(s) | 128, 446, 609, 1542 |
| Alw26I | GTCTC | 4 cut(s) | 94, 494, 662, 1634 |
| AlwI | GGATC | 5 cut(s) | 19, 80, 1081, 1699, 1805 |
| Ama87I | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| Aor13HI | TCCGGA | 1 cut(s) | 1188 |
| AoxI | GGCC | 3 cut(s) | 912, 1202, 1724 |
| ApeKI | GCWGC | 4 cut(s) | 110, 287, 1367, 1499 |
| ApoI | RAATTY | 1 cut(s) | 59 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 383, 409, 415, 441, 576, 608, 1340, 1372 |
| AseI | ATTAAT | 1 cut(s) | 945 |
| AsiGI | ACCGGT | 1 cut(s) | 1094 |
| AspLEI | GCGC | 4 cut(s) | 277, 292, 650, 955 |
| AspS9I | GGNCC | 2 cut(s) | 1202, 1775 |
| AsuC2I | CCSGG | 1 cut(s) | 306 |
| AsuHPI | GGTGA | 2 cut(s) | 326, 1444 |
| AsuII | TTCGAA | 1 cut(s) | 612 |
| AvaI | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| AvaII | GGWCC | 1 cut(s) | 1775 |
| AxyI | CCTNAGG | 1 cut(s) | 1807 |
| BalI | TGGCCA | 1 cut(s) | 914 |
| BanII | GRGCYC | 2 cut(s) | 248, 254 |
| BbsI | GAAGAC | 4 cut(s) | 555, 722, 1088, 1515 |
| BbvI | GCAGC | 4 cut(s) | 97, 299, 1379, 1486 |
| BccI | CCATC | 5 cut(s) | 914, 1064, 1382, 1617, 1626 |
| BceAI | ACGGC | 2 cut(s) | 1152, 1212 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 202, 236, 739, 773 |
| BciT130I | CCWGG | 4 cut(s) | 506, 632, 1416, 1728 |
| BclI | TGATCA | 1 cut(s) | 765 |
| BcnI | CCSGG | 1 cut(s) | 306 |
| BcoDI | GTCTC | 4 cut(s) | 94, 494, 662, 1634 |
| BfmI | CTRYAG | 2 cut(s) | 337, 1318 |
| BfoI | RGCGCY | 1 cut(s) | 278 |
| BfrI | CTTAAG | 1 cut(s) | 1514 |
| BglII | AGATCT | 1 cut(s) | 457 |
| BisI | GCNGC | 6 cut(s) | 111, 211, 288, 1368, 1371, 1500 |
| BlpI | GCTNAGC | 1 cut(s) | 644 |
| BlsI | GCNGC | 6 cut(s) | 112, 212, 289, 1369, 1372, 1501 |
| Bme1390I | CCNGG | 5 cut(s) | 306, 506, 632, 1416, 1728 |
| Bme18I | GGWCC | 1 cut(s) | 1775 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 835 |
| BmeT110I | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| BmgT120I | GGNCC | 2 cut(s) | 1202, 1775 |
| BmiI | GGNNCC | 2 cut(s) | 1187, 1777 |
| BmrFI | CCNGG | 5 cut(s) | 306, 506, 632, 1416, 1728 |
| BmsI | GCATC | 4 cut(s) | 508, 940, 1354, 1828 |
| BoxI | GACNNNNGTC | 1 cut(s) | 722 |
| BpiI | GAAGAC | 4 cut(s) | 555, 722, 1088, 1515 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 773, 805 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 644 |
| Bpu14I | TTCGAA | 1 cut(s) | 612 |
| BpuEI | CTTGAG | 4 cut(s) | 476, 505, 720, 1425 |
| BpuMI | CCSGG | 1 cut(s) | 306 |
| Bsa29I | ATCGAT | 1 cut(s) | 1246 |
| BsaAI | YACGTR | 1 cut(s) | 1232 |
| BsaI | GGTCTC | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 2 cut(s) | 1546, 1556 |
| BsaWI | WCCGGW | 3 cut(s) | 793, 1094, 1188 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 311, 841, 1195 |
| Bse118I | RCCGGY | 1 cut(s) | 1094 |
| Bse1I | ACTGG | 2 cut(s) | 1474, 1520 |
| Bse21I | CCTNAGG | 1 cut(s) | 1807 |
| Bse3DI | GCAATG | 2 cut(s) | 536, 969 |
| BseAI | TCCGGA | 1 cut(s) | 1188 |
| BseBI | CCWGG | 4 cut(s) | 506, 632, 1416, 1728 |
| BseCI | ATCGAT | 1 cut(s) | 1246 |
| BseDI | CCNNGG | 2 cut(s) | 1546, 1556 |
| BseGI | GGATG | 3 cut(s) | 514, 831, 1628 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 311, 841, 1195 |
| BseMI | GCAATG | 2 cut(s) | 536, 969 |
| BseMII | CTCAG | 3 cut(s) | 947, 960, 1821 |
| BseNI | ACTGG | 2 cut(s) | 1474, 1520 |
| BseRI | GAGGAG | 2 cut(s) | 138, 1766 |
| BseXI | GCAGC | 4 cut(s) | 97, 299, 1379, 1486 |
| BseYI | CCCAGC | 1 cut(s) | 1199 |
| Bsh1236I | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| Bsh1285I | CGRYCG | 3 cut(s) | 525, 1246, 1556 |
| BshFI | GGCC | 3 cut(s) | 914, 1204, 1726 |
| BshTI | ACCGGT | 1 cut(s) | 1094 |
| BshVI | ATCGAT | 1 cut(s) | 1246 |
| BsiEI | CGRYCG | 3 cut(s) | 525, 1246, 1556 |
| BsiHKCI | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| BsiSI | CCGG | 4 cut(s) | 306, 794, 1095, 1189 |
| BslFI | GGGAC | 1 cut(s) | 1224 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 311, 841, 1195 |
| BsmAI | GTCTC | 4 cut(s) | 94, 494, 662, 1634 |
| BsmBI | CGTCTC | 1 cut(s) | 1634 |
| BsmFI | GGGAC | 1 cut(s) | 1224 |
| BsnI | GGCC | 3 cut(s) | 914, 1204, 1726 |
| Bso31I | GGTCTC | 1 cut(s) | 94 |
| BsoBI | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| Bsp119I | TTCGAA | 1 cut(s) | 612 |
| Bsp1286I | GDGCHC | 2 cut(s) | 248, 254 |
| Bsp13I | TCCGGA | 1 cut(s) | 1188 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 644 |
| Bsp68I | TCGCGA | 1 cut(s) | 1652 |
| BspACI | CCGC | 8 cut(s) | 204, 210, 285, 650, 1123, 1371, 1437, 1673 |
| BspANI | GGCC | 3 cut(s) | 914, 1204, 1726 |
| BspCNI | CTCAG | 3 cut(s) | 948, 961, 1820 |
| BspDI | ATCGAT | 1 cut(s) | 1246 |
| BspEI | TCCGGA | 1 cut(s) | 1188 |
| BspFNI | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| BspLI | GGNNCC | 2 cut(s) | 1187, 1777 |
| BspMAI | CTGCAG | 1 cut(s) | 341 |
| BspPI | GGATC | 5 cut(s) | 19, 80, 1081, 1699, 1805 |
| BspQI | GCTCTTC | 1 cut(s) | 236 |
| BspT104I | TTCGAA | 1 cut(s) | 612 |
| BspTI | CTTAAG | 1 cut(s) | 1514 |
| BspTNI | GGTCTC | 1 cut(s) | 94 |
| BsrBI | CCGCTC | 1 cut(s) | 1439 |
| BsrDI | GCAATG | 2 cut(s) | 536, 969 |
| BsrFI | RCCGGY | 1 cut(s) | 1094 |
| BsrI | ACTGG | 2 cut(s) | 1474, 1520 |
| BssAI | RCCGGY | 1 cut(s) | 1094 |
| BssECI | CCNNGG | 2 cut(s) | 1546, 1556 |
| Bst2UI | CCWGG | 4 cut(s) | 506, 632, 1416, 1728 |
| Bst6I | CTCTTC | 3 cut(s) | 62, 236, 1524 |
| BstAFI | CTTAAG | 1 cut(s) | 1514 |
| BstBAI | YACGTR | 1 cut(s) | 1232 |
| BstBI | TTCGAA | 1 cut(s) | 612 |
| BstDEI | CTNAG | 4 cut(s) | 644, 956, 969, 1807 |
| BstDSI | CCRYGG | 1 cut(s) | 1556 |
| BstEII | GGTNACC | 2 cut(s) | 1277, 1432 |
| BstF5I | GGATG | 3 cut(s) | 514, 831, 1628 |
| BstFNI | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| BstH2I | RGCGCY | 1 cut(s) | 278 |
| BstHHI | GCGC | 4 cut(s) | 277, 292, 650, 955 |
| BstMAI | GTCTC | 4 cut(s) | 94, 494, 662, 1634 |
| BstMCI | CGRYCG | 3 cut(s) | 525, 1246, 1556 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 140, 210, 355, 443, 911, 959 |
| BstNI | CCWGG | 4 cut(s) | 506, 632, 1416, 1728 |
| BstNSI | RCATGY | 2 cut(s) | 358, 675 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 722 |
| BstPI | GGTNACC | 2 cut(s) | 1277, 1432 |
| BstSCI | CCNGG | 5 cut(s) | 304, 504, 630, 1414, 1726 |
| BstSFI | CTRYAG | 2 cut(s) | 337, 1318 |
| BstUI | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| BstV1I | GCAGC | 4 cut(s) | 97, 299, 1379, 1486 |
| BstV2I | GAAGAC | 4 cut(s) | 555, 722, 1088, 1515 |
| BstX2I | RGATCY | 2 cut(s) | 24, 457 |
| BstYI | RGATCY | 2 cut(s) | 24, 457 |
| Bsu15I | ATCGAT | 1 cut(s) | 1246 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1807 |
| BsuRI | GGCC | 3 cut(s) | 914, 1204, 1726 |
| BsuTUI | ATCGAT | 1 cut(s) | 1246 |
| BtgI | CCRYGG | 1 cut(s) | 1556 |
| BtsCI | GGATG | 3 cut(s) | 514, 831, 1628 |
| BtsI | GCAGTG | 1 cut(s) | 931 |
| BtsIMutI | CAGTG | 3 cut(s) | 303, 931, 1807 |
| BtuMI | TCGCGA | 1 cut(s) | 1652 |
| CfoI | GCGC | 4 cut(s) | 277, 292, 650, 955 |
| Cfr10I | RCCGGY | 1 cut(s) | 1094 |
| Cfr13I | GGNCC | 2 cut(s) | 1202, 1775 |
| ClaI | ATCGAT | 1 cut(s) | 1246 |
| CseI | GACGC | 3 cut(s) | 560, 561, 712 |
| Csp6I | GTAC | 5 cut(s) | 988, 1481, 1534, 1666, 1678 |
| CspAI | ACCGGT | 1 cut(s) | 1094 |
| CviAII | CATG | 5 cut(s) | 355, 655, 672, 1109, 1168 |
| CviQI | GTAC | 5 cut(s) | 988, 1481, 1534, 1666, 1678 |
| DdeI | CTNAG | 4 cut(s) | 644, 956, 969, 1807 |
| DriI | GACNNNNNGTC | 1 cut(s) | 835 |
| EaeI | YGGCCR | 1 cut(s) | 912 |
| Eam1104I | CTCTTC | 3 cut(s) | 62, 236, 1524 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 835 |
| EarI | CTCTTC | 3 cut(s) | 62, 236, 1524 |
| Eco24I | GRGCYC | 2 cut(s) | 248, 254 |
| Eco31I | GGTCTC | 1 cut(s) | 94 |
| Eco47I | GGWCC | 1 cut(s) | 1775 |
| Eco57I | CTGAAG | 1 cut(s) | 729 |
| Eco81I | CCTNAGG | 1 cut(s) | 1807 |
| Eco88I | CYCGRG | 3 cut(s) | 247, 262, 1547 |
| Eco91I | GGTNACC | 2 cut(s) | 1277, 1432 |
| EcoO65I | GGTNACC | 2 cut(s) | 1277, 1432 |
| EcoRII | CCWGG | 4 cut(s) | 504, 630, 1414, 1726 |
| EcoT38I | GRGCYC | 2 cut(s) | 248, 254 |
| Esp3I | CGTCTC | 1 cut(s) | 1634 |
| FaeI | CATG | 5 cut(s) | 358, 658, 675, 1112, 1171 |
| FaqI | GGGAC | 1 cut(s) | 1224 |
| FatI | CATG | 5 cut(s) | 354, 654, 671, 1108, 1167 |
| FbaI | TGATCA | 1 cut(s) | 765 |
| Fnu4HI | GCNGC | 6 cut(s) | 111, 211, 288, 1368, 1371, 1500 |
| FokI | GGATG | 3 cut(s) | 521, 818, 1635 |
| FriOI | GRGCYC | 2 cut(s) | 248, 254 |
| Fsp4HI | GCNGC | 6 cut(s) | 111, 211, 288, 1368, 1371, 1500 |
| GlaI | GCGC | 4 cut(s) | 276, 291, 649, 954 |
| GluI | GCNGC | 6 cut(s) | 111, 211, 288, 1368, 1371, 1500 |
| GsaI | CCCAGC | 1 cut(s) | 1203 |
| HaeII | RGCGCY | 1 cut(s) | 278 |
| HaeIII | GGCC | 3 cut(s) | 914, 1204, 1726 |
| HapII | CCGG | 4 cut(s) | 306, 794, 1095, 1189 |
| HgaI | GACGC | 3 cut(s) | 560, 561, 712 |
| HhaI | GCGC | 4 cut(s) | 277, 292, 650, 955 |
| Hin1II | CATG | 5 cut(s) | 358, 658, 675, 1112, 1171 |
| Hin6I | GCGC | 4 cut(s) | 275, 290, 648, 953 |
| HinP1I | GCGC | 4 cut(s) | 275, 290, 648, 953 |
| HincII | GTYRAC | 2 cut(s) | 604, 1453 |
| HindII | GTYRAC | 2 cut(s) | 604, 1453 |
| HinfI | GANTC | 4 cut(s) | 487, 784, 1051, 1589 |
| HpaII | CCGG | 4 cut(s) | 306, 794, 1095, 1189 |
| HphI | GGTGA | 2 cut(s) | 326, 1444 |
| Hpy166II | GTNNAC | 4 cut(s) | 40, 604, 1453, 1483 |
| Hpy188I | TCNGA | 8 cut(s) | 417, 709, 744, 1067, 1243, 1361, 1403, 1464 |
| Hpy8I | GTNNAC | 4 cut(s) | 40, 604, 1453, 1483 |
| Hpy99I | CGWCG | 4 cut(s) | 224, 421, 572, 577 |
| HpyAV | CCTTC | 9 cut(s) | 472, 686, 796, 880, 978, 1039, 1154, 1268, 1789 |
| HpyCH4IV | ACGT | 8 cut(s) | 34, 55, 219, 591, 999, 1142, 1231, 1661 |
| HpyCH4V | TGCA | 6 cut(s) | 339, 358, 1112, 1151, 1367, 1502 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 140, 210, 355, 443, 911, 959 |
| HpyF3I | CTNAG | 4 cut(s) | 644, 956, 969, 1807 |
| HpySE526I | ACGT | 8 cut(s) | 34, 55, 219, 591, 999, 1142, 1231, 1661 |
| Hsp92II | CATG | 5 cut(s) | 358, 658, 675, 1112, 1171 |
| HspAI | GCGC | 4 cut(s) | 275, 290, 648, 953 |
| Kpn2I | TCCGGA | 1 cut(s) | 1188 |
| Ksp22I | TGATCA | 1 cut(s) | 765 |
| LguI | GCTCTTC | 1 cut(s) | 236 |
| LmnI | GCTCC | 1 cut(s) | 125 |
| Lsp1109I | GCAGC | 4 cut(s) | 97, 299, 1379, 1486 |
| LweI | GCATC | 4 cut(s) | 508, 940, 1354, 1828 |
| MaeII | ACGT | 8 cut(s) | 34, 55, 219, 591, 999, 1142, 1231, 1661 |
| MaeIII | GTNAC | 7 cut(s) | 592, 1027, 1090, 1097, 1277, 1388, 1432 |
| MbiI | CCGCTC | 1 cut(s) | 1439 |
| MfeI | CAATTG | 2 cut(s) | 1086, 1486 |
| MflI | RGATCY | 2 cut(s) | 24, 457 |
| MhlI | GDGCHC | 2 cut(s) | 248, 254 |
| MlsI | TGGCCA | 1 cut(s) | 914 |
| MluCI | AATT | 6 cut(s) | 59, 727, 751, 1086, 1251, 1486 |
| MluNI | TGGCCA | 1 cut(s) | 914 |
| MlyI | GAGTC | 1 cut(s) | 496 |
| MmeI | TCCRAC | 7 cut(s) | 61, 100, 440, 1045, 1318, 1600, 1753 |
| Mox20I | TGGCCA | 1 cut(s) | 914 |
| MroI | TCCGGA | 1 cut(s) | 1188 |
| MscI | TGGCCA | 1 cut(s) | 914 |
| MseI | TTAA | 7 cut(s) | 701, 869, 945, 1515, 1719, 1734, 1821 |
| Msp20I | TGGCCA | 1 cut(s) | 914 |
| MspCI | CTTAAG | 1 cut(s) | 1514 |
| MspI | CCGG | 4 cut(s) | 306, 794, 1095, 1189 |
| MspR9I | CCNGG | 5 cut(s) | 306, 506, 632, 1416, 1728 |
| MunI | CAATTG | 2 cut(s) | 1086, 1486 |
| MvaI | CCWGG | 4 cut(s) | 506, 632, 1416, 1728 |
| MvnI | CGCG | 5 cut(s) | 572, 650, 761, 1652, 1673 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 140, 210, 355, 443, 911, 959 |
| NciI | CCSGG | 1 cut(s) | 306 |
| NlaIII | CATG | 5 cut(s) | 358, 658, 675, 1112, 1171 |
| NlaIV | GGNNCC | 2 cut(s) | 1187, 1777 |
| NmuCI | GTSAC | 4 cut(s) | 592, 1027, 1090, 1432 |
| NruI | TCGCGA | 1 cut(s) | 1652 |
| NspI | RCATGY | 2 cut(s) | 358, 675 |
| NspV | TTCGAA | 1 cut(s) | 612 |
| PciSI | GCTCTTC | 1 cut(s) | 236 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1649 |
| PfeI | GAWTC | 3 cut(s) | 784, 1051, 1589 |
| PinAI | ACCGGT | 1 cut(s) | 1094 |
| PkrI | GCNGC | 6 cut(s) | 112, 212, 289, 1369, 1372, 1501 |
| Ple19I | CGATCG | 2 cut(s) | 525, 1246 |
| PleI | GAGTC | 1 cut(s) | 495 |
| PpsI | GAGTC | 1 cut(s) | 495 |
| Ppu21I | YACGTR | 1 cut(s) | 1232 |
| PshAI | GACNNNNGTC | 1 cut(s) | 722 |
| PshBI | ATTAAT | 1 cut(s) | 945 |
| Psp1406I | AACGTT | 1 cut(s) | 1142 |
| Psp6I | CCWGG | 4 cut(s) | 504, 630, 1414, 1726 |
| PspEI | GGTNACC | 2 cut(s) | 1277, 1432 |
| PspFI | CCCAGC | 1 cut(s) | 1199 |
| PspGI | CCWGG | 4 cut(s) | 504, 630, 1414, 1726 |
| PspN4I | GGNNCC | 2 cut(s) | 1187, 1777 |
| PspPI | GGNCC | 2 cut(s) | 1202, 1775 |
| PstI | CTGCAG | 1 cut(s) | 341 |
| PsuI | RGATCY | 2 cut(s) | 24, 457 |
| PvuI | CGATCG | 2 cut(s) | 525, 1246 |
| RruI | TCGCGA | 1 cut(s) | 1652 |
| RsaI | GTAC | 5 cut(s) | 989, 1482, 1535, 1667, 1679 |
| RsaNI | GTAC | 5 cut(s) | 988, 1481, 1534, 1666, 1678 |
| SapI | GCTCTTC | 1 cut(s) | 236 |
| SaqAI | TTAA | 7 cut(s) | 701, 869, 945, 1515, 1719, 1734, 1821 |
| SatI | GCNGC | 6 cut(s) | 111, 211, 288, 1368, 1371, 1500 |
| Sau96I | GGNCC | 2 cut(s) | 1202, 1775 |
| SchI | GAGTC | 1 cut(s) | 496 |
| ScrFI | CCNGG | 5 cut(s) | 306, 506, 632, 1416, 1728 |
| SduI | GDGCHC | 2 cut(s) | 248, 254 |
| SfaNI | GCATC | 4 cut(s) | 508, 940, 1354, 1828 |
| SfcI | CTRYAG | 2 cut(s) | 337, 1318 |
| SfuI | TTCGAA | 1 cut(s) | 612 |
| SinI | GGWCC | 1 cut(s) | 1775 |
| SmlI | CTYRAG | 5 cut(s) | 484, 491, 735, 1440, 1514 |
| SmoI | CTYRAG | 5 cut(s) | 484, 491, 735, 1440, 1514 |
| Sse9I | AATT | 6 cut(s) | 59, 727, 751, 1086, 1251, 1486 |
| SsiI | CCGC | 8 cut(s) | 204, 210, 285, 650, 1123, 1371, 1437, 1673 |
| StyD4I | CCNGG | 5 cut(s) | 304, 504, 630, 1414, 1726 |
| TaiI | ACGT | 8 cut(s) | 37, 58, 222, 594, 1002, 1145, 1234, 1664 |
| TaqI | TCGA | 7 cut(s) | 525, 546, 612, 1246, 1347, 1573, 1599 |
| TasI | AATT | 6 cut(s) | 59, 727, 751, 1086, 1251, 1486 |
| TatI | WGTACW | 4 cut(s) | 1480, 1533, 1665, 1677 |
| TauI | GCSGC | 2 cut(s) | 213, 1373 |
| TfiI | GAWTC | 3 cut(s) | 784, 1051, 1589 |
| Tru1I | TTAA | 7 cut(s) | 701, 869, 945, 1515, 1719, 1734, 1821 |
| Tru9I | TTAA | 7 cut(s) | 701, 869, 945, 1515, 1719, 1734, 1821 |
| TscAI | CASTG | 3 cut(s) | 303, 931, 1807 |
| TseFI | GTSAC | 4 cut(s) | 592, 1027, 1090, 1432 |
| TseI | GCWGC | 4 cut(s) | 110, 287, 1367, 1499 |
| Tsp45I | GTSAC | 4 cut(s) | 592, 1027, 1090, 1432 |
| TspDTI | ATGAA | 7 cut(s) | 174, 468, 815, 1156, 1342, 1387, 1521 |
| TspGWI | ACGGA | 1 cut(s) | 1658 |
| TspRI | CASTG | 3 cut(s) | 303, 931, 1807 |
| Vha464I | CTTAAG | 1 cut(s) | 1514 |
| VpaK11BI | GGWCC | 1 cut(s) | 1775 |
| VspI | ATTAAT | 1 cut(s) | 945 |
| XapI | RAATTY | 1 cut(s) | 59 |
| XceI | RCATGY | 2 cut(s) | 358, 675 |