MD02G1104300.v1.1

pectinesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0015779
Physical Location & Seq
Reverse (-)
8381354 .. 8383911
2558 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1104300.v1.1.491

Sequence Viewer

Length: 1800 bp
ATGGCATTTCAGGATTTCGACCAGATTTCTGAACGCCGAAAGGCCGAGAAGGCACGTAAGGTCAAGAAGAGAATTATCATAGCGGTTGTCGTTATTCTCCTCCTTGTTCTGATTGCCGTCGGAGCCTATTTCATTGTCAACAAACTTAGCAACAAGAAGGGAAATGCTAAGCAGGGCAATACTACGCAAGGCAAAGCAGGGAAACCTGCACCGGCGGCTCCAAAACAGAAAAATACACCACCGAAGAACAAAGCCCCTTCAAATAGTAAGAAGATCCTGAAGGAGATGTGCAGTGCGACAGATTACAAGGACAAGTGCGAGGGCATCATTGAAAAGGCAAATGGCGAAACGAAACCCATGGCATTCATCAAGACCGCAATCTCAGCCACCTCGGACGAGGCCAAGAGTGTCTACAGCAAAACCGCTGAGCTCACTTTCAGCAGCCCGGAAGAGAAGGGAGCGTTCGAGGATTGCAAAGGGCTGTTCGAGGACGCCATGGAGGAATTGGGGGACGCCATTTCTCAGGTTGGCAACAACACTGAGTCAGGGAAAGTGCGCATCGGCGTCTTGAACAGCTGGCTAAGTGCGGTGATATCTTACCAGCAGACATGCGTCGACGGGTTTCCTGATGGAAAATTGAAGTCCGACTTGGAGAAGATGTTGCAGACCTCTAAGGAATTCACGAGCAATTCCCTGGCCATGCTTTCACTCCTTAACCAGTTGCAACTACCGAGTACAGGAGCAGCTGCAGGATCAAATCGCCGCCTTCTATCGCAGGACAAGAGCGGATTCCCTAACTGGATGAGTCATGAGGACCGAAGGATGTTGAAGAAAAACGACAAGAAACTCACCCCCAACGTGACAGTGGCAAAAGATGGCAGTGGAAACTACAAAACCATTAGTGAAGCCTTGGAAAAAATGCCCCAAAAATACGAAGGACGGTATGTCATCTATGTTAAAGAAGGAGTCTATGATGAGACTGTGACTGTGACAAAGAAGATGCCGAACGTTACAATGTACGGCGATGGTTCACAGAAGAGCATCATCACTGGAAATAAGAACTTAGCCGATGGAGTTAGGACATTTCAAACTGCACCTTTCGCGGCCTTAGGGGAAGGTTTTATGGCAAAGTCGATGGGATTCAGAAACACGGCTGGACCTGAAAAGCGTCAGGCAGTGGCAGCGAGAGTCCAAGCAGACCGCGCTATTTTTCTGAACTGCCGGTTTGAAGGGTACCAAGAGACATTGTACGCACAAACTCATCGGCAGTTCTATAAGAGCTGTGTCATTTCCGGCACAGTTGATTTCATCTTTGGCGACGCTGCTGCCATCTTCCAGAACTGCTTGATCTATGTTCGCAAGCCTTTGGAAAACCAACAAAACACTGTCACAGCACAGGGAAGGACTGACAAACGGGAAACCACAGGAATAGTGTTGCAGAATTGCCAAATCATGCCTGACAAAGATCTTGAGCCAGTAAAGTCCCAATTCAAGACCTACCTCGGAAGGCCATGGAAAGAATTTTCGAGAACCATAGTGATGGAGTCGACAATTGAGGACCTGATTCACCTGGATGGATGGACACCGTGGGAAGGAGATTTCGCGTTGAAAACGTTGTATTACGCAGAGTATAACAACAAGGGACCGGGCGCAAAAACTGACAACAGAGTGAAGTGGGATGGATACAAGAAAATTAACAAGGAAGAGGCAATGCAGTATACTGTAGGGCCTTTCTTGAAAGGGCACGCTTGGCTCAAGGTTGAGGGTGTTCCTGTCCGCTTCGGCCTATTTGAAAATTAA

Protein Analysis

600

Amino Acids

66.68

Weight (kDa)

9.29

Isoelectric Point (pI)

33.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 92 - 234 5.4e-29 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 286 - 581 1.1e-141 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015779)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26450 AT4G33230
fragaria_vesca FvH4_1g09571
malus_domestica MD02G1104300.v1.1 MD15G1224600.v1.1
prunus_persica Prupe.7G190500_v2.0.a1
rosa_laevigata RLG00000016639
rosa_multiflora Rmu_sc0004244.1_g000003
rosa_roxburghii Rroxscaffold_2G00145660
rosa_rugosa Rorug02G0057900
rosa_samantha Rh2AG104600 Rh2BG106800 Rh2CG108600 Rh2DG107700
rosa_wichuraiana Rw2G008080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 557
Acc36I ACCTGC 1 cut(s) 214
Acc65I GGTACC 1 cut(s) 1233
AccB1I GGYRCC 1 cut(s) 1233
AccBSI CCGCTC 1 cut(s) 786
AccI GTMKAC 4 cut(s) 411, 615, 1547, 1718
AccII CGCG 3 cut(s) 1103, 1203, 1604
AclI AACGTT 2 cut(s) 1008, 1613
AclWI GGATC 2 cut(s) 268, 760
AcoI YGGCCR 1 cut(s) 696
AcsI RAATTY 2 cut(s) 677, 1520
AcuI CTGAAG 1 cut(s) 299
AcyI GRCGYC 3 cut(s) 492, 513, 564
AfaI GTAC 4 cut(s) 736, 1019, 1235, 1250
AfiI CCNNNNNNNGG 2 cut(s) 737, 1592
AhdI GACNNNNNGTC 1 cut(s) 944
AjnI CCWGG 2 cut(s) 693, 1569
AjuI GAANNNNNNNTTGG 2 cut(s) 632, 664
AluBI AGCT 4 cut(s) 430, 576, 746, 1281
AluI AGCT 4 cut(s) 430, 576, 746, 1281
Alw21I GWGCWC 1 cut(s) 432
Alw26I GTCTC 2 cut(s) 971, 1235
AlwI GGATC 2 cut(s) 268, 760
AoxI GGCC 7 cut(s) 42, 399, 696, 1104, 1508, 1727, 1783
ApeKI GCWGC 6 cut(s) 441, 743, 746, 1181, 1322, 1325
ApoI RAATTY 2 cut(s) 677, 1520
Asp718I GGTACC 1 cut(s) 1233
AspLEI GCGC 3 cut(s) 558, 1205, 1652
AspS9I GGNCC 5 cut(s) 814, 1157, 1558, 1643, 1727
AsuC2I CCSGG 2 cut(s) 446, 1647
AsuHPI GGTGA 3 cut(s) 601, 841, 1559
AvaII GGWCC 4 cut(s) 814, 1157, 1558, 1643
AxyI CCTNAGG 1 cut(s) 1108
BaeGI GKGCMC 1 cut(s) 1746
BalI TGGCCA 1 cut(s) 698
BanI GGYRCC 1 cut(s) 1233
BanII GRGCYC 1 cut(s) 432
BauI CACGAG 1 cut(s) 682
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 6 cut(s) 453, 733, 755, 1193, 1309, 1312
BceAI ACGGC 3 cut(s) 101, 1036, 1167
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 2 cut(s) 695, 1571
BciVI GTATCC 1 cut(s) 1676
BcnI CCSGG 2 cut(s) 446, 1647
BcoDI GTCTC 2 cut(s) 971, 1235
BfmI CTRYAG 3 cut(s) 412, 747, 1722
BfuAI ACCTGC 1 cut(s) 214
BfuI GTATCC 1 cut(s) 1676
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 1 cut(s) 1465
BisI GCNGC 9 cut(s) 216, 442, 744, 747, 763, 1104, 1182, 1323, 1326
BlpI GCTNAGC 2 cut(s) 168, 426
BlsI GCNGC 9 cut(s) 217, 443, 745, 748, 764, 1105, 1183, 1324, 1327
Bme1390I CCNGG 4 cut(s) 446, 695, 1571, 1647
Bme18I GGWCC 4 cut(s) 814, 1157, 1558, 1643
BmeRI GACNNNNNGTC 1 cut(s) 944
BmgT120I GGNCC 5 cut(s) 814, 1157, 1558, 1643, 1727
BmiI GGNNCC 4 cut(s) 124, 219, 1235, 1644
BmrFI CCNGG 4 cut(s) 446, 695, 1571, 1647
BmsI GCATC 4 cut(s) 333, 567, 990, 1050
BoxI GACNNNNGTC 1 cut(s) 611
Bpu1102I GCTNAGC 2 cut(s) 168, 426
BpuEI CTTGAG 2 cut(s) 1490, 1739
BpuMI CCSGG 2 cut(s) 446, 1647
BsaAI YACGTR 1 cut(s) 56
BsaHI GRCGYC 3 cut(s) 492, 513, 564
BsaJI CCNNGG 8 cut(s) 357, 390, 495, 693, 909, 1501, 1511, 1586
BsaXI ACNNNNNCTCC 2 cut(s) 644, 674
Bsc4I CCNNNNNNNGG 2 cut(s) 737, 1592
Bse118I RCCGGY 2 cut(s) 211, 1221
Bse1I ACTGG 4 cut(s) 718, 803, 1054, 1475
Bse21I CCTNAGG 1 cut(s) 1108
Bse3DI GCAATG 1 cut(s) 1716
BseBI CCWGG 2 cut(s) 695, 1571
BseDI CCNNGG 8 cut(s) 357, 390, 495, 693, 909, 1501, 1511, 1586
BseGI GGATG 5 cut(s) 807, 828, 1579, 1583, 1684
BseLI CCNNNNNNNGG 2 cut(s) 737, 1592
BseMI GCAATG 1 cut(s) 1716
BseMII CTCAG 4 cut(s) 396, 417, 531, 536
BseNI ACTGG 4 cut(s) 718, 803, 1054, 1475
BseRI GAGGAG 1 cut(s) 89
BseSI GKGCMC 1 cut(s) 1746
BseXI GCAGC 6 cut(s) 453, 733, 755, 1193, 1309, 1312
BsgI GTGCAG 3 cut(s) 192, 310, 1077
Bsh1236I CGCG 3 cut(s) 1103, 1203, 1604
BshFI GGCC 7 cut(s) 44, 401, 698, 1106, 1510, 1729, 1785
BshNI GGYRCC 1 cut(s) 1233
BsiHKAI GWGCWC 1 cut(s) 432
BsiSI CCGG 5 cut(s) 212, 446, 1222, 1293, 1646
BslFI GGGAC 3 cut(s) 524, 1468, 1656
BslI CCNNNNNNNGG 2 cut(s) 737, 1592
BsmAI GTCTC 2 cut(s) 971, 1235
BsmFI GGGAC 3 cut(s) 524, 1468, 1656
BsmI GAATGC 1 cut(s) 362
BsnI GGCC 7 cut(s) 44, 401, 698, 1106, 1510, 1729, 1785
Bsp1286I GDGCHC 2 cut(s) 432, 1746
Bsp143I GATC 4 cut(s) 273, 752, 1347, 1465
Bsp1720I GCTNAGC 2 cut(s) 168, 426
Bsp19I CCATGG 3 cut(s) 357, 495, 1511
BspANI GGCC 7 cut(s) 44, 401, 698, 1106, 1510, 1729, 1785
BspCNI CTCAG 4 cut(s) 395, 418, 532, 535
BspFNI CGCG 3 cut(s) 1103, 1203, 1604
BspHI TCATGA 1 cut(s) 808
BspLI GGNNCC 4 cut(s) 124, 219, 1235, 1644
BspMAI CTGCAG 1 cut(s) 751
BspMI ACCTGC 1 cut(s) 214
BspPI GGATC 2 cut(s) 268, 760
BspQI GCTCTTC 1 cut(s) 1031
BspT107I GGYRCC 1 cut(s) 1233
BsrBI CCGCTC 1 cut(s) 786
BsrDI GCAATG 1 cut(s) 1716
BsrFI RCCGGY 2 cut(s) 211, 1221
BsrI ACTGG 4 cut(s) 718, 803, 1054, 1475
BssAI RCCGGY 2 cut(s) 211, 1221
BssECI CCNNGG 8 cut(s) 357, 390, 495, 693, 909, 1501, 1511, 1586
BssMI GATC 4 cut(s) 273, 752, 1347, 1465
BssNAI GTATAC 1 cut(s) 1719
BssNI GRCGYC 3 cut(s) 492, 513, 564
BssSI CACGAG 1 cut(s) 682
BssT1I CCWWGG 4 cut(s) 357, 495, 909, 1511
Bst1107I GTATAC 1 cut(s) 1719
Bst2BI CACGAG 1 cut(s) 682
Bst2UI CCWGG 2 cut(s) 695, 1571
Bst4CI ACNGT 8 cut(s) 865, 942, 982, 988, 1300, 1387, 1587, 1723
Bst6I CTCTTC 4 cut(s) 62, 444, 1031, 1698
BstACI GRCGYC 3 cut(s) 492, 513, 564
BstBAI YACGTR 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 578, 1361, 1746
BstDSI CCRYGG 4 cut(s) 357, 495, 1511, 1586
BstF5I GGATG 5 cut(s) 807, 828, 1579, 1583, 1684
BstFNI CGCG 3 cut(s) 1103, 1203, 1604
BstHHI GCGC 3 cut(s) 558, 1205, 1652
BstKTI GATC 4 cut(s) 276, 755, 1350, 1468
BstMAI GTCTC 2 cut(s) 971, 1235
BstMBI GATC 4 cut(s) 273, 752, 1347, 1465
BstMWI GCNNNNNNNGC 8 cut(s) 50, 122, 215, 383, 1100, 1181, 1202, 1750
BstNI CCWGG 2 cut(s) 695, 1571
BstNSI RCATGY 1 cut(s) 612
BstPAI GACNNNNGTC 1 cut(s) 611
BstSCI CCNGG 4 cut(s) 444, 693, 1569, 1645
BstSFI CTRYAG 3 cut(s) 412, 747, 1722
BstSLI GKGCMC 1 cut(s) 1746
BstUI CGCG 3 cut(s) 1103, 1203, 1604
BstV1I GCAGC 6 cut(s) 453, 733, 755, 1193, 1309, 1312
BstX2I RGATCY 2 cut(s) 273, 1465
BstXI CCANNNNNNTGG 1 cut(s) 1540
BstYI RGATCY 2 cut(s) 273, 1465
BstZ17I GTATAC 1 cut(s) 1719
Bsu36I CCTNAGG 1 cut(s) 1108
BsuI GTATCC 1 cut(s) 1676
BsuRI GGCC 7 cut(s) 44, 401, 698, 1106, 1510, 1729, 1785
BtgI CCRYGG 4 cut(s) 357, 495, 1511, 1586
BtgZI GCGATG 1 cut(s) 1038
BtsCI GGATG 5 cut(s) 807, 828, 1579, 1583, 1684
BtsI GCAGTG 3 cut(s) 298, 886, 1182
BtsIMutI CAGTG 7 cut(s) 298, 537, 870, 886, 1047, 1182, 1383
BveI ACCTGC 1 cut(s) 214
Cac8I GCNNGC 3 cut(s) 578, 1361, 1746
CciI TCATGA 1 cut(s) 808
CfoI GCGC 3 cut(s) 558, 1205, 1652
Cfr10I RCCGGY 2 cut(s) 211, 1221
Cfr13I GGNCC 5 cut(s) 814, 1157, 1558, 1643, 1727
CseI GACGC 6 cut(s) 500, 521, 553, 601, 1157, 1328
Csp6I GTAC 4 cut(s) 735, 1018, 1234, 1249
CviAII CATG 7 cut(s) 358, 496, 609, 700, 809, 1453, 1512
CviQI GTAC 4 cut(s) 735, 1018, 1234, 1249
DpnI GATC 4 cut(s) 275, 754, 1349, 1467
DpnII GATC 4 cut(s) 273, 752, 1347, 1465
DriI GACNNNNNGTC 1 cut(s) 944
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 4 cut(s) 62, 444, 1031, 1698
Eam1105I GACNNNNNGTC 1 cut(s) 944
EarI CTCTTC 4 cut(s) 62, 444, 1031, 1698
Ecl136II GAGCTC 1 cut(s) 430
Eco130I CCWWGG 4 cut(s) 357, 495, 909, 1511
Eco24I GRGCYC 1 cut(s) 432
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 4 cut(s) 814, 1157, 1558, 1643
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 299
Eco81I CCTNAGG 1 cut(s) 1108
EcoICRI GAGCTC 1 cut(s) 430
EcoO109I RGGNCCY 2 cut(s) 1558, 1727
EcoRI GAATTC 1 cut(s) 677
EcoRII CCWGG 2 cut(s) 693, 1569
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 4 cut(s) 357, 495, 909, 1511
EcoT38I GRGCYC 1 cut(s) 432
ErhI CCWWGG 4 cut(s) 357, 495, 909, 1511
FaeI CATG 7 cut(s) 361, 499, 612, 703, 812, 1456, 1515
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FaqI GGGAC 3 cut(s) 524, 1468, 1656
FatI CATG 7 cut(s) 357, 495, 608, 699, 808, 1452, 1511
FblI GTMKAC 4 cut(s) 411, 615, 1547, 1718
Fnu4HI GCNGC 9 cut(s) 216, 442, 744, 747, 763, 1104, 1182, 1323, 1326
FokI GGATG 5 cut(s) 814, 835, 1586, 1590, 1691
FriOI GRGCYC 1 cut(s) 432
Fsp4HI GCNGC 9 cut(s) 216, 442, 744, 747, 763, 1104, 1182, 1323, 1326
FspAI RTGCGCAY 1 cut(s) 557
FspI TGCGCA 1 cut(s) 557
GlaI GCGC 3 cut(s) 557, 1204, 1651
GluI GCNGC 9 cut(s) 216, 442, 744, 747, 763, 1104, 1182, 1323, 1326
HaeIII GGCC 7 cut(s) 44, 401, 698, 1106, 1510, 1729, 1785
HapII CCGG 5 cut(s) 212, 446, 1222, 1293, 1646
HgaI GACGC 6 cut(s) 500, 521, 553, 601, 1157, 1328
HhaI GCGC 3 cut(s) 558, 1205, 1652
Hin1I GRCGYC 3 cut(s) 492, 513, 564
Hin1II CATG 7 cut(s) 361, 499, 612, 703, 812, 1456, 1515
Hin6I GCGC 3 cut(s) 556, 1203, 1650
HinP1I GCGC 3 cut(s) 556, 1203, 1650
HincII GTYRAC 3 cut(s) 139, 616, 1548
HindII GTYRAC 3 cut(s) 139, 616, 1548
HinfI GANTC 8 cut(s) 542, 789, 805, 966, 1140, 1188, 1544, 1564
HpaII CCGG 5 cut(s) 212, 446, 1222, 1293, 1646
HphI GGTGA 3 cut(s) 601, 841, 1559
Hpy166II GTNNAC 6 cut(s) 139, 412, 616, 1031, 1548, 1719
Hpy188I TCNGA 8 cut(s) 31, 111, 122, 394, 646, 1145, 1215, 1505
Hpy8I GTNNAC 6 cut(s) 139, 412, 616, 1031, 1548, 1719
Hpy99I CGWCG 4 cut(s) 122, 617, 620, 1322
HpyCH4III ACNGT 8 cut(s) 865, 942, 982, 988, 1300, 1387, 1587, 1723
HpyCH4IV ACGT 4 cut(s) 55, 858, 1008, 1613
HpyCH4V TGCA 9 cut(s) 209, 291, 474, 664, 724, 749, 1094, 1438, 1714
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 122, 215, 383, 1100, 1181, 1202, 1750
HpySE526I ACGT 4 cut(s) 55, 858, 1008, 1613
Hsp92I GRCGYC 3 cut(s) 492, 513, 564
Hsp92II CATG 7 cut(s) 361, 499, 612, 703, 812, 1456, 1515
HspAI GCGC 3 cut(s) 556, 1203, 1650
KpnI GGTACC 1 cut(s) 1237
Kzo9I GATC 4 cut(s) 273, 752, 1347, 1465
LguI GCTCTTC 1 cut(s) 1031
LmnI GCTCC 4 cut(s) 122, 223, 458, 740
Lsp1109I GCAGC 6 cut(s) 453, 733, 755, 1193, 1309, 1312
LweI GCATC 4 cut(s) 333, 567, 990, 1050
MaeII ACGT 4 cut(s) 55, 858, 1008, 1613
MaeIII GTNAC 5 cut(s) 859, 982, 988, 1009, 1387
MalI GATC 4 cut(s) 275, 754, 1349, 1467
MbiI CCGCTC 1 cut(s) 786
MboI GATC 4 cut(s) 273, 752, 1347, 1465
MfeI CAATTG 1 cut(s) 1551
MflI RGATCY 2 cut(s) 273, 1465
MhlI GDGCHC 2 cut(s) 432, 1746
MlsI TGGCCA 1 cut(s) 698
MluNI TGGCCA 1 cut(s) 698
MlyI GAGTC 5 cut(s) 551, 814, 975, 1197, 1553
MmeI TCCRAC 2 cut(s) 100, 669
Mox20I TGGCCA 1 cut(s) 698
MscI TGGCCA 1 cut(s) 698
MseI TTAA 4 cut(s) 714, 957, 1695, 1798
MslI CAYNNNNRTG 2 cut(s) 1538, 1572
Msp20I TGGCCA 1 cut(s) 698
MspA1I CMGCKG 3 cut(s) 425, 576, 746
MspI CCGG 5 cut(s) 212, 446, 1222, 1293, 1646
MspR9I CCNGG 4 cut(s) 446, 695, 1571, 1647
MunI CAATTG 1 cut(s) 1551
Mva1269I GAATGC 1 cut(s) 362
MvaI CCWGG 2 cut(s) 695, 1571
MvnI CGCG 3 cut(s) 1103, 1203, 1604
MwoI GCNNNNNNNGC 8 cut(s) 50, 122, 215, 383, 1100, 1181, 1202, 1750
NciI CCSGG 2 cut(s) 446, 1647
NcoI CCATGG 3 cut(s) 357, 495, 1511
NdeII GATC 4 cut(s) 273, 752, 1347, 1465
NlaIII CATG 7 cut(s) 361, 499, 612, 703, 812, 1456, 1515
NlaIV GGNNCC 4 cut(s) 124, 219, 1235, 1644
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 4 cut(s) 859, 982, 988, 1387
NsbI TGCGCA 1 cut(s) 557
NspI RCATGY 1 cut(s) 612
PagI TCATGA 1 cut(s) 808
PciSI GCTCTTC 1 cut(s) 1031
PctI GAATGC 1 cut(s) 362
PfeI GAWTC 3 cut(s) 789, 1140, 1564
PkrI GCNGC 9 cut(s) 217, 443, 745, 748, 764, 1105, 1183, 1324, 1327
PleI GAGTC 5 cut(s) 550, 813, 974, 1196, 1552
PpsI GAGTC 5 cut(s) 550, 813, 974, 1196, 1552
Ppu21I YACGTR 1 cut(s) 56
PpuMI RGGWCCY 1 cut(s) 1558
PshAI GACNNNNGTC 1 cut(s) 611
Psp124BI GAGCTC 1 cut(s) 432
Psp1406I AACGTT 2 cut(s) 1008, 1613
Psp5II RGGWCCY 1 cut(s) 1558
Psp6I CCWGG 2 cut(s) 693, 1569
PspGI CCWGG 2 cut(s) 693, 1569
PspN4I GGNNCC 4 cut(s) 124, 219, 1235, 1644
PspPI GGNCC 5 cut(s) 814, 1157, 1558, 1643, 1727
PspPPI RGGWCCY 1 cut(s) 1558
PstI CTGCAG 1 cut(s) 751
PsuI RGATCY 2 cut(s) 273, 1465
PvuII CAGCTG 2 cut(s) 576, 746
RsaI GTAC 4 cut(s) 736, 1019, 1235, 1250
RsaNI GTAC 4 cut(s) 735, 1018, 1234, 1249
RseI CAYNNNNRTG 2 cut(s) 1538, 1572
SacI GAGCTC 1 cut(s) 432
SalI GTCGAC 2 cut(s) 614, 1546
SapI GCTCTTC 1 cut(s) 1031
SaqAI TTAA 4 cut(s) 714, 957, 1695, 1798
SatI GCNGC 9 cut(s) 216, 442, 744, 747, 763, 1104, 1182, 1323, 1326
Sau3AI GATC 4 cut(s) 273, 752, 1347, 1465
Sau96I GGNCC 5 cut(s) 814, 1157, 1558, 1643, 1727
SchI GAGTC 5 cut(s) 551, 814, 975, 1197, 1553
ScrFI CCNGG 4 cut(s) 446, 695, 1571, 1647
SduI GDGCHC 2 cut(s) 432, 1746
SfaNI GCATC 4 cut(s) 333, 567, 990, 1050
SfcI CTRYAG 3 cut(s) 412, 747, 1722
SgrAI CRCCGGYG 1 cut(s) 211
SgrDI CGTCGACG 1 cut(s) 614
SinI GGWCC 4 cut(s) 814, 1157, 1558, 1643
SmiMI CAYNNNNRTG 2 cut(s) 1538, 1572
SmlI CTYRAG 2 cut(s) 1469, 1754
SmoI CTYRAG 2 cut(s) 1469, 1754
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 4 cut(s) 444, 693, 1569, 1645
StyI CCWWGG 4 cut(s) 357, 495, 909, 1511
TaaI ACNGT 8 cut(s) 865, 942, 982, 988, 1300, 1387, 1587, 1723
TaiI ACGT 4 cut(s) 58, 861, 1011, 1616
TaqI TCGA 7 cut(s) 18, 465, 486, 615, 1133, 1526, 1547
TaqII GACCGA 1 cut(s) 831
TatI WGTACW 1 cut(s) 734
TauI GCSGC 3 cut(s) 218, 765, 1106
TfiI GAWTC 3 cut(s) 789, 1140, 1564
Tru1I TTAA 4 cut(s) 714, 957, 1695, 1798
Tru9I TTAA 4 cut(s) 714, 957, 1695, 1798
TscAI CASTG 7 cut(s) 298, 544, 870, 886, 1054, 1182, 1390
TseFI GTSAC 4 cut(s) 859, 982, 988, 1387
TseI GCWGC 6 cut(s) 441, 743, 746, 1181, 1322, 1325
Tsp45I GTSAC 4 cut(s) 859, 982, 988, 1387
TspDTI ATGAA 3 cut(s) 121, 355, 1297
TspRI CASTG 7 cut(s) 298, 544, 870, 886, 1054, 1182, 1390
VpaK11BI GGWCC 4 cut(s) 814, 1157, 1558, 1643
XapI RAATTY 2 cut(s) 677, 1520
XceI RCATGY 1 cut(s) 612
XcmI CCANNNNNNNNNTGG 2 cut(s) 502, 862
XmiI GTMKAC 4 cut(s) 411, 615, 1547, 1718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.