Prupe.7G190500_v2.0.a1

pectinesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0015779
Physical Location & Seq
Forward (+)
18250054 .. 18252735
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G190500.1

Sequence Viewer

Length: 1791 bp
ATGGCATTCCAGGATTTTGACCAGATATCCGAACGCCGAAAGGCTGAGAGGGCACGTAAAATGAGGAAGAGAATTATCATCGCAGTTGTCGTCGTCGTGCTGCTTATTCTGATTGCTGTCGGAGCCTATTTACTTTTGAACAAACTTAATAGTAAGAAGGGCAATGCTAAGCAAGACAAAACAGCCAATTCTAAGCCTGCTCCGGCAAAAGCTCAACCCAAGAACGATCAAGCCAAGAAGAAAGAGCCGACAAAAGGTGAGAAGATAATGAAGCAGATGTGTGGCGCAACGGACTACGAGGACAAGTGCGAGAGCATCATCGGAAAGGCAAAGGGCGCATCTAAACCAAAGGAATTCATCAAGACCGCTATCTCAGCAGCCTCGGATGAGGCCAGGATTGCCTACAGCAAATCCAGCGAGCTCACTTTTAACAGCCCAGAAGAGAAGGGAGCATTTGAGGATTGCAAAGTGCTGTTTGAAGATGCCATGGACGAATTAGGGGATGCCATTTCTCAAATTGGCAACACAACTGCTTCGGGGAAGATTCGAACCGGTCTCTTGAACACTTGGCTGAGTGCAGTCATATCTTACCAGCAGACGTGTGTTGATGGGTTTCCTGATGGAAAATTGAAGTCTGACTTGGAGAAGATGTTGCAGGCCTCCAAGGAATTCACCAGCAATTCCTTGGCCATGCTTTCACTCCTTTCCCAATTCCAGCTACCGGTTACAGCAGCAGTTTCAGGAGCAAAACGTCGTCTTCTAGCACAGAACAAGGATGGGTTTCCTACCTGGATGAGCCATGAGGAGCGAAGGGTGTTGAAGAAAAACGATGAGAAGCCCACACCTAATGTGACTGTGGCAAAAGATGGCAGTGGAAACTTCAAAACCATTAGTGAAGCCTTGGCAGCCATGCCTGCAAAATATGAAGGACGATATATCATCTACGTTAAAGGAGGAGTCTATGATGAGACTGTGATTGTGACAAAAAAGATGCCAAATGTTACCATATACGGTGATGGGTCACAGAAGAGCATCATCACCGGGAATAAGAACTTTGCGGACGGAGTTAGGACATTCCAAACTGCATCTTTTGCGGCCTTAGGAGAAGGTTTTATGGCAAAGTCCATGGGATTCAGAAACACGGCAGGTCCTGAGAAGCATCAGGCAGTGGCAGCAAGAGTCCAAGCAGACCGTGCTATTTTTCTCAACTGCCGATTTGAAGGGTACCAAGACACCTTGTATGCACAAACCCATCGGCAGTTCTATAAGAGCTGTGTTATTTCAGGCACCGTTGATTTCATCTTTGGTGACGCTGCTGCTATCTTTCAGAACTGCTTGATCTACGTCAGGAAACCTATGGAAAACCAACAAAACATTGTTACTGCCCAGGGACGGACTGACAAAAGGGAAACCACAGGAATAGTTCTGCAGAATTGCAAAATCATGCCTGACAAAGATCTTGAGCCAGTAAAGTCTCAGTTCAAGACCTACCTCGGGAGGCCATGGAAGGAATTCTCAAGAACCATAGTGATGGGCTCAACAATTGAGGATCTGATTCACCCAGATGGATGGACACCATGGCAAGGAGACTTTGCACTGAAAACGCTGTATTATGCAGAGTATAACAACAAGGGACCAGGTGCCAAGACTGATAACAGGGTCAAGTGGTCTGGATACAAAGTCATTGACAAGCAAGAGGCTATGAAATATACTGTAGGGCCTTTCTTGAAAGGGAATGCTTGGCTCAGGGTCAAGGGGGTTCCTGTTCGCTTCGGCCTATCTGAAAACTAA

Protein Analysis

597

Amino Acids

66.17

Weight (kDa)

9.45

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015779)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26450 AT4G33230
fragaria_vesca FvH4_1g09571
malus_domestica MD02G1104300.v1.1 MD15G1224600.v1.1
prunus_persica Prupe.7G190500_v2.0.a1
rosa_laevigata RLG00000016639
rosa_multiflora Rmu_sc0004244.1_g000003
rosa_roxburghii Rroxscaffold_2G00145660
rosa_rugosa Rorug02G0057900
rosa_samantha Rh2AG104600 Rh2BG106800 Rh2CG108600 Rh2DG107700
rosa_wichuraiana Rw2G008080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1136
Acc65I GGTACC 1 cut(s) 1224
AccB1I GGYRCC 3 cut(s) 1224, 1286, 1640
AciI CCGC 3 cut(s) 366, 1058, 1094
AclWI GGATC 1 cut(s) 1557
AcoI YGGCCR 1 cut(s) 687
AcsI RAATTY 3 cut(s) 353, 668, 1511
AfaI GTAC 1 cut(s) 1226
AfiI CCNNNNNNNGG 5 cut(s) 254, 721, 1392, 1494, 1583
AflIII ACRYGT 1 cut(s) 599
AgeI ACCGGT 2 cut(s) 551, 721
AgsI TTSAA 9 cut(s) 139, 479, 562, 631, 820, 883, 1220, 1483, 1729
AjiI CACGTC 1 cut(s) 600
AjnI CCWGG 5 cut(s) 9, 392, 788, 1386, 1636
AjuI GAANNNNNNNTTGG 2 cut(s) 623, 655
AluBI AGCT 4 cut(s) 212, 421, 718, 1272
AluI AGCT 4 cut(s) 212, 421, 718, 1272
Alw21I GWGCWC 1 cut(s) 423
Alw26I GTCTC 4 cut(s) 560, 962, 1479, 1581
AlwI GGATC 1 cut(s) 1557
AlwNI CAGNNNCTG 1 cut(s) 1151
Ama87I CYCGRG 1 cut(s) 1493
AoxI GGCC 7 cut(s) 390, 657, 687, 1095, 1499, 1718, 1774
ApeKI GCWGC 7 cut(s) 100, 377, 731, 905, 1172, 1313, 1316
ApoI RAATTY 3 cut(s) 353, 668, 1511
AsiGI ACCGGT 2 cut(s) 551, 721
Asp700I GAANNNNTTC 1 cut(s) 1511
Asp718I GGTACC 1 cut(s) 1224
AspLEI GCGC 2 cut(s) 287, 338
AspS9I GGNCC 3 cut(s) 1148, 1634, 1718
AsuC2I CCSGG 1 cut(s) 1042
AsuHPI GGTGA 6 cut(s) 269, 664, 1025, 1030, 1319, 1550
AsuII TTCGAA 1 cut(s) 547
AvaI CYCGRG 1 cut(s) 1493
AvaII GGWCC 2 cut(s) 1148, 1634
AxyI CCTNAGG 1 cut(s) 1099
BaeGI GKGCMC 1 cut(s) 55
BalI TGGCCA 1 cut(s) 689
BanI GGYRCC 3 cut(s) 1224, 1286, 1640
BanII GRGCYC 2 cut(s) 423, 1538
BbsI GAAGAC 1 cut(s) 749
Bbv12I GWGCWC 1 cut(s) 423
BbvI GCAGC 7 cut(s) 87, 389, 743, 917, 1184, 1300, 1303
BccI CCATC 9 cut(s) 602, 614, 770, 860, 1010, 1260, 1525, 1559, 1563
BceAI ACGGC 1 cut(s) 1158
BciT130I CCWGG 5 cut(s) 11, 394, 790, 1388, 1638
BciVI GTATCC 1 cut(s) 1667
BcnI CCSGG 1 cut(s) 1042
BcoDI GTCTC 4 cut(s) 560, 962, 1479, 1581
BfaI CTAG 1 cut(s) 761
BfmI CTRYAG 3 cut(s) 403, 1427, 1713
BfuAI ACCTGC 1 cut(s) 1136
BfuI GTATCC 1 cut(s) 1667
BglII AGATCT 1 cut(s) 1456
BisI GCNGC 8 cut(s) 101, 378, 732, 906, 1095, 1173, 1314, 1317
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 8 cut(s) 102, 379, 733, 907, 1096, 1174, 1315, 1318
Bme1390I CCNGG 6 cut(s) 11, 394, 790, 1042, 1388, 1638
Bme18I GGWCC 2 cut(s) 1148, 1634
BmeT110I CYCGRG 1 cut(s) 1493
BmgBI CACGTC 1 cut(s) 600
BmgT120I GGNCC 3 cut(s) 1148, 1634, 1718
BmiI GGNNCC 6 cut(s) 124, 1226, 1288, 1635, 1642, 1761
BmrFI CCNGG 6 cut(s) 11, 394, 790, 1042, 1388, 1638
BmsI GCATC 8 cut(s) 324, 347, 472, 493, 981, 1041, 1094, 1168
BpiI GAAGAC 1 cut(s) 749
Bpu10I CCTNAGC 1 cut(s) 1745
Bpu1102I GCTNAGC 1 cut(s) 168
Bpu14I TTCGAA 1 cut(s) 547
BpuEI CTTGAG 2 cut(s) 1481, 1501
BpuMI CCSGG 1 cut(s) 1042
BsaAI YACGTR 1 cut(s) 56
BsaI GGTCTC 1 cut(s) 560
BsaWI WCCGGW 2 cut(s) 551, 721
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 5 cut(s) 254, 721, 1392, 1494, 1583
Bse118I RCCGGY 2 cut(s) 551, 721
Bse1I ACTGG 1 cut(s) 1466
Bse21I CCTNAGG 1 cut(s) 1099
Bse3DI GCAATG 1 cut(s) 169
BseBI CCWGG 5 cut(s) 11, 394, 790, 1388, 1638
BseGI GGATG 5 cut(s) 391, 508, 781, 798, 1574
BseLI CCNNNNNNNGG 5 cut(s) 254, 721, 1392, 1494, 1583
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 6 cut(s) 36, 387, 563, 1143, 1490, 1759
BseNI ACTGG 1 cut(s) 1466
BseRI GAGGAG 2 cut(s) 818, 969
BseSI GKGCMC 1 cut(s) 55
BseXI GCAGC 7 cut(s) 87, 389, 743, 917, 1184, 1300, 1303
BsgI GTGCAG 1 cut(s) 597
BshFI GGCC 7 cut(s) 392, 659, 689, 1097, 1501, 1720, 1776
BshNI GGYRCC 3 cut(s) 1224, 1286, 1640
BshTI ACCGGT 2 cut(s) 551, 721
BsiHKAI GWGCWC 1 cut(s) 423
BsiHKCI CYCGRG 1 cut(s) 1493
BsiSI CCGG 4 cut(s) 203, 552, 722, 1041
BslFI GGGAC 2 cut(s) 1404, 1647
BslI CCNNNNNNNGG 5 cut(s) 254, 721, 1392, 1494, 1583
BsmAI GTCTC 4 cut(s) 560, 962, 1479, 1581
BsmFI GGGAC 2 cut(s) 1404, 1647
BsmI GAATGC 2 cut(s) 5, 1741
BsnI GGCC 7 cut(s) 392, 659, 689, 1097, 1501, 1720, 1776
Bso31I GGTCTC 1 cut(s) 560
BsoBI CYCGRG 1 cut(s) 1493
Bsp119I TTCGAA 1 cut(s) 547
Bsp1286I GDGCHC 3 cut(s) 55, 423, 1538
Bsp143I GATC 4 cut(s) 226, 1338, 1456, 1549
Bsp1720I GCTNAGC 1 cut(s) 168
Bsp19I CCATGG 4 cut(s) 486, 1125, 1502, 1577
BspACI CCGC 3 cut(s) 366, 1058, 1094
BspANI GGCC 7 cut(s) 392, 659, 689, 1097, 1501, 1720, 1776
BspCNI CTCAG 6 cut(s) 37, 386, 564, 1144, 1489, 1758
BspLI GGNNCC 6 cut(s) 124, 1226, 1288, 1635, 1642, 1761
BspMAI CTGCAG 1 cut(s) 1431
BspMI ACCTGC 1 cut(s) 1136
BspPI GGATC 1 cut(s) 1557
BspQI GCTCTTC 1 cut(s) 1022
BspT104I TTCGAA 1 cut(s) 547
BspT107I GGYRCC 3 cut(s) 1224, 1286, 1640
BspTNI GGTCTC 1 cut(s) 560
BsrDI GCAATG 1 cut(s) 169
BsrFI RCCGGY 2 cut(s) 551, 721
BsrI ACTGG 1 cut(s) 1466
BssAI RCCGGY 2 cut(s) 551, 721
BssMI GATC 4 cut(s) 226, 1338, 1456, 1549
BssT1I CCWWGG 7 cut(s) 486, 663, 684, 900, 1125, 1502, 1577
Bst2UI CCWGG 5 cut(s) 11, 394, 790, 1388, 1638
Bst4CI ACNGT 6 cut(s) 856, 973, 1013, 1193, 1291, 1714
Bst6I CTCTTC 3 cut(s) 62, 435, 1022
BstAPI GCANNNNNTGC 2 cut(s) 1091, 1193
BstBAI YACGTR 1 cut(s) 56
BstBI TTCGAA 1 cut(s) 547
BstC8I GCNNGC 4 cut(s) 198, 419, 657, 915
BstDEI CTNAG 9 cut(s) 45, 168, 192, 373, 572, 1099, 1152, 1476, 1745
BstDSI CCRYGG 4 cut(s) 486, 1125, 1502, 1577
BstF5I GGATG 5 cut(s) 391, 508, 781, 798, 1574
BstHHI GCGC 2 cut(s) 287, 338
BstKTI GATC 4 cut(s) 229, 1341, 1459, 1552
BstMAI GTCTC 4 cut(s) 560, 962, 1479, 1581
BstMBI GATC 4 cut(s) 226, 1338, 1456, 1549
BstNI CCWGG 5 cut(s) 11, 394, 790, 1388, 1638
BstSCI CCNGG 6 cut(s) 9, 392, 788, 1040, 1386, 1636
BstSFI CTRYAG 3 cut(s) 403, 1427, 1713
BstSLI GKGCMC 1 cut(s) 55
BstV1I GCAGC 7 cut(s) 87, 389, 743, 917, 1184, 1300, 1303
BstV2I GAAGAC 1 cut(s) 749
BstX2I RGATCY 2 cut(s) 1456, 1549
BstXI CCANNNNNNTGG 2 cut(s) 1531, 1569
BstYI RGATCY 2 cut(s) 1456, 1549
Bsu36I CCTNAGG 1 cut(s) 1099
BsuI GTATCC 1 cut(s) 1667
BsuRI GGCC 7 cut(s) 392, 659, 689, 1097, 1501, 1720, 1776
BtgI CCRYGG 4 cut(s) 486, 1125, 1502, 1577
BtgZI GCGATG 1 cut(s) 64
BtrI CACGTC 1 cut(s) 600
BtsCI GGATG 5 cut(s) 391, 508, 781, 798, 1574
BtsI GCAGTG 2 cut(s) 877, 1173
BtsIMutI CAGTG 3 cut(s) 877, 1173, 1595
BveI ACCTGC 1 cut(s) 1136
Cac8I GCNNGC 4 cut(s) 198, 419, 657, 915
CaiI CAGNNNCTG 1 cut(s) 1151
CfoI GCGC 2 cut(s) 287, 338
Cfr10I RCCGGY 2 cut(s) 551, 721
Cfr13I GGNCC 3 cut(s) 1148, 1634, 1718
CseI GACGC 1 cut(s) 1319
CsiI ACCWGGT 1 cut(s) 1636
Csp6I GTAC 1 cut(s) 1225
CspAI ACCGGT 2 cut(s) 551, 721
CviAII CATG 8 cut(s) 487, 691, 800, 910, 1126, 1444, 1503, 1578
CviQI GTAC 1 cut(s) 1225
DdeI CTNAG 9 cut(s) 45, 168, 192, 373, 572, 1099, 1152, 1476, 1745
DpnI GATC 4 cut(s) 228, 1340, 1458, 1551
DpnII GATC 4 cut(s) 226, 1338, 1456, 1549
EaeI YGGCCR 1 cut(s) 687
Eam1104I CTCTTC 3 cut(s) 62, 435, 1022
EarI CTCTTC 3 cut(s) 62, 435, 1022
Ecl136II GAGCTC 1 cut(s) 421
Eco130I CCWWGG 7 cut(s) 486, 663, 684, 900, 1125, 1502, 1577
Eco147I AGGCCT 1 cut(s) 659
Eco24I GRGCYC 2 cut(s) 423, 1538
Eco31I GGTCTC 1 cut(s) 560
Eco32I GATATC 1 cut(s) 27
Eco47I GGWCC 2 cut(s) 1148, 1634
Eco53kI GAGCTC 1 cut(s) 421
Eco81I CCTNAGG 1 cut(s) 1099
Eco88I CYCGRG 1 cut(s) 1493
EcoICRI GAGCTC 1 cut(s) 421
EcoO109I RGGNCCY 2 cut(s) 1148, 1718
EcoRI GAATTC 3 cut(s) 353, 668, 1511
EcoRII CCWGG 5 cut(s) 9, 392, 788, 1386, 1636
EcoRV GATATC 1 cut(s) 27
EcoT14I CCWWGG 7 cut(s) 486, 663, 684, 900, 1125, 1502, 1577
EcoT38I GRGCYC 2 cut(s) 423, 1538
ErhI CCWWGG 7 cut(s) 486, 663, 684, 900, 1125, 1502, 1577
FaeI CATG 8 cut(s) 490, 694, 803, 913, 1129, 1447, 1506, 1581
FalI AAGNNNNNCTT 2 cut(s) 623, 655
FaqI GGGAC 2 cut(s) 1404, 1647
FatI CATG 8 cut(s) 486, 690, 799, 909, 1125, 1443, 1502, 1577
Fnu4HI GCNGC 8 cut(s) 101, 378, 732, 906, 1095, 1173, 1314, 1317
FokI GGATG 5 cut(s) 398, 515, 788, 805, 1581
FriOI GRGCYC 2 cut(s) 423, 1538
Fsp4HI GCNGC 8 cut(s) 101, 378, 732, 906, 1095, 1173, 1314, 1317
FspBI CTAG 1 cut(s) 761
GlaI GCGC 2 cut(s) 286, 337
GluI GCNGC 8 cut(s) 101, 378, 732, 906, 1095, 1173, 1314, 1317
HaeIII GGCC 7 cut(s) 392, 659, 689, 1097, 1501, 1720, 1776
HapII CCGG 4 cut(s) 203, 552, 722, 1041
HgaI GACGC 1 cut(s) 1319
HhaI GCGC 2 cut(s) 287, 338
Hin1II CATG 8 cut(s) 490, 694, 803, 913, 1129, 1447, 1506, 1581
Hin6I GCGC 2 cut(s) 285, 336
HinP1I GCGC 2 cut(s) 285, 336
HinfI GANTC 5 cut(s) 544, 957, 1131, 1179, 1555
HpaII CCGG 4 cut(s) 203, 552, 722, 1041
HphI GGTGA 6 cut(s) 269, 664, 1025, 1030, 1319, 1550
Hpy99I CGWCG 3 cut(s) 95, 98, 756
HpyAV CCTTC 7 cut(s) 151, 439, 804, 920, 1100, 1214, 1501
HpyCH4III ACNGT 6 cut(s) 856, 973, 1013, 1193, 1291, 1714
HpyCH4IV ACGT 5 cut(s) 55, 599, 751, 945, 1344
HpyF3I CTNAG 9 cut(s) 45, 168, 192, 373, 572, 1099, 1152, 1476, 1745
HpySE526I ACGT 5 cut(s) 55, 599, 751, 945, 1344
Hsp92II CATG 8 cut(s) 490, 694, 803, 913, 1129, 1447, 1506, 1581
HspAI GCGC 2 cut(s) 285, 336
KpnI GGTACC 1 cut(s) 1228
Kzo9I GATC 4 cut(s) 226, 1338, 1456, 1549
LguI GCTCTTC 1 cut(s) 1022
LmnI GCTCC 5 cut(s) 122, 205, 449, 743, 805
Lsp1109I GCAGC 7 cut(s) 87, 389, 743, 917, 1184, 1300, 1303
LweI GCATC 8 cut(s) 324, 347, 472, 493, 981, 1041, 1094, 1168
MabI ACCWGGT 1 cut(s) 1636
MaeI CTAG 1 cut(s) 761
MaeII ACGT 5 cut(s) 55, 599, 751, 945, 1344
MaeIII GTNAC 7 cut(s) 724, 850, 979, 1000, 1020, 1307, 1378
MalI GATC 4 cut(s) 228, 1340, 1458, 1551
MboI GATC 4 cut(s) 226, 1338, 1456, 1549
MfeI CAATTG 1 cut(s) 1542
MflI RGATCY 2 cut(s) 1456, 1549
MhlI GDGCHC 3 cut(s) 55, 423, 1538
MlsI TGGCCA 1 cut(s) 689
MluNI TGGCCA 1 cut(s) 689
MlyI GAGTC 2 cut(s) 966, 1188
MmeI TCCRAC 1 cut(s) 100
Mox20I TGGCCA 1 cut(s) 689
MroXI GAANNNNTTC 1 cut(s) 1511
MscI TGGCCA 1 cut(s) 689
MseI TTAA 3 cut(s) 147, 429, 948
MslI CAYNNNNRTG 2 cut(s) 1529, 1563
Msp20I TGGCCA 1 cut(s) 689
MspI CCGG 4 cut(s) 203, 552, 722, 1041
MspR9I CCNGG 6 cut(s) 11, 394, 790, 1042, 1388, 1638
MunI CAATTG 1 cut(s) 1542
Mva1269I GAATGC 2 cut(s) 5, 1741
MvaI CCWGG 5 cut(s) 11, 394, 790, 1388, 1638
NciI CCSGG 1 cut(s) 1042
NcoI CCATGG 4 cut(s) 486, 1125, 1502, 1577
NdeII GATC 4 cut(s) 226, 1338, 1456, 1549
NlaIII CATG 8 cut(s) 490, 694, 803, 913, 1129, 1447, 1506, 1581
NlaIV GGNNCC 6 cut(s) 124, 1226, 1288, 1635, 1642, 1761
NmuCI GTSAC 4 cut(s) 850, 979, 1020, 1307
NspV TTCGAA 1 cut(s) 547
PasI CCCWGGG 1 cut(s) 1387
PceI AGGCCT 1 cut(s) 659
PciSI GCTCTTC 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 2 cut(s) 5, 1741
PdmI GAANNNNTTC 1 cut(s) 1511
PfeI GAWTC 3 cut(s) 544, 1131, 1555
PfoI TCCNGGA 1 cut(s) 9
PinAI ACCGGT 2 cut(s) 551, 721
PkrI GCNGC 8 cut(s) 102, 379, 733, 907, 1096, 1174, 1315, 1318
PleI GAGTC 2 cut(s) 965, 1187
PpsI GAGTC 2 cut(s) 965, 1187
Ppu21I YACGTR 1 cut(s) 56
PpuMI RGGWCCY 1 cut(s) 1148
Psp124BI GAGCTC 1 cut(s) 423
Psp5II RGGWCCY 1 cut(s) 1148
Psp6I CCWGG 5 cut(s) 9, 392, 788, 1386, 1636
PspGI CCWGG 5 cut(s) 9, 392, 788, 1386, 1636
PspN4I GGNNCC 6 cut(s) 124, 1226, 1288, 1635, 1642, 1761
PspPI GGNCC 3 cut(s) 1148, 1634, 1718
PspPPI RGGWCCY 1 cut(s) 1148
PstI CTGCAG 1 cut(s) 1431
PstNI CAGNNNCTG 1 cut(s) 1151
PsuI RGATCY 2 cut(s) 1456, 1549
RsaI GTAC 1 cut(s) 1226
RsaNI GTAC 1 cut(s) 1225
RseI CAYNNNNRTG 2 cut(s) 1529, 1563
SacI GAGCTC 1 cut(s) 423
SapI GCTCTTC 1 cut(s) 1022
SaqAI TTAA 3 cut(s) 147, 429, 948
SatI GCNGC 8 cut(s) 101, 378, 732, 906, 1095, 1173, 1314, 1317
Sau3AI GATC 4 cut(s) 226, 1338, 1456, 1549
Sau96I GGNCC 3 cut(s) 1148, 1634, 1718
SchI GAGTC 2 cut(s) 966, 1188
ScrFI CCNGG 6 cut(s) 11, 394, 790, 1042, 1388, 1638
SduI GDGCHC 3 cut(s) 55, 423, 1538
SexAI ACCWGGT 1 cut(s) 1636
SfaNI GCATC 8 cut(s) 324, 347, 472, 493, 981, 1041, 1094, 1168
SfcI CTRYAG 3 cut(s) 403, 1427, 1713
SfuI TTCGAA 1 cut(s) 547
SinI GGWCC 2 cut(s) 1148, 1634
SmiMI CAYNNNNRTG 2 cut(s) 1529, 1563
SmlI CTYRAG 2 cut(s) 1460, 1516
SmoI CTYRAG 2 cut(s) 1460, 1516
SseBI AGGCCT 1 cut(s) 659
SsiI CCGC 3 cut(s) 366, 1058, 1094
SspMI CTAG 1 cut(s) 761
SstI GAGCTC 1 cut(s) 423
StuI AGGCCT 1 cut(s) 659
StyD4I CCNGG 6 cut(s) 9, 392, 788, 1040, 1386, 1636
StyI CCWWGG 7 cut(s) 486, 663, 684, 900, 1125, 1502, 1577
TaaI ACNGT 6 cut(s) 856, 973, 1013, 1193, 1291, 1714
TaiI ACGT 5 cut(s) 58, 602, 754, 948, 1347
TaqI TCGA 1 cut(s) 547
TauI GCSGC 1 cut(s) 1097
TfiI GAWTC 3 cut(s) 544, 1131, 1555
Tru1I TTAA 3 cut(s) 147, 429, 948
Tru9I TTAA 3 cut(s) 147, 429, 948
TscAI CASTG 3 cut(s) 877, 1173, 1602
TseFI GTSAC 4 cut(s) 850, 979, 1020, 1307
TseI GCWGC 7 cut(s) 100, 377, 731, 905, 1172, 1313, 1316
Tsp45I GTSAC 4 cut(s) 850, 979, 1020, 1307
TspDTI ATGAA 5 cut(s) 284, 346, 939, 1288, 1718
TspGWI ACGGA 3 cut(s) 305, 1077, 1408
TspRI CASTG 3 cut(s) 877, 1173, 1602
VpaK11BI GGWCC 2 cut(s) 1148, 1634
XapI RAATTY 3 cut(s) 353, 668, 1511
XcmI CCANNNNNNNNNTGG 1 cut(s) 682
XmnI GAANNNNTTC 1 cut(s) 1511
XspI CTAG 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.