AT2G29090

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
12494826 .. 12499723
4898 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G29090.4

Sequence Viewer

Length: 1449 bp
ATGCAAATCTCATCTTCATCGTCTTCAAATTTCTTCTCTTCTCTTTATGCTGATGAACCGGCACTAATCACATTAACAATTGTTGTAGTAGTAGTAGTGTTACTATTTAAATGGTGGTTGCACTGGAAAGAGCAAAGACTACGGCTACCTCCTGGCTCCATGGGGTTGCCTTACATCGGAGAGACACTCCGCCTCTACACAGAAAATCCCAATTCCTTCTTCGCCACTCGCCAAAACAAGTACGGGGATATATTCAAGACGCACATATTAGGATGTCCATGTGTGATGATAAGTAGTCCAGAGGCGGCTCGAATGGTGTTAGTGAGCAAAGCTCACTTGTTCAAGCCAACTTATCCTCCAAGCAAAGAGCGTATGATTGGACCAGAGGCTCTTTTCTTCCACCAAGGTCCATACCATTCTACCCTTAAGCGGCTGGTCCAGTCTTCTTTCATGCCTTCTGCTCTCAGACCAACCGTCTCTCACATCGAGCTCCTTGTCCTCCAAACCCTTTCCTCTTGGACGTCCCAAAAGTCCATCAACACCCTCGAATACATGAAACGATATGCATTCGATGTGGCGATCATGTCAGCGTTCGGGGACAAAGAGGAGCCCACTACGATTGATGTTATTAAGCTTCTCTATCAACGTCTCGAAAGGGGTTACAACTCCATGCCTCTCGACCTACCGGGCACACTTTTTCATAAGTCCATGAAGGCAAGAATAGAATTAAGCGAGGAACTAAGGAAAGTAATAGAGAAGAGAAGAGAGAATGGGAGAGAAGAAGGAGGACTATTGGGAGTACTTCTGGGAGCAAAGGATCAAAAACGCAACGGCTTAAGTGATTCACAGATTGCTGACAACATCATCGGTGTTATATTCGCCGCCACCGACACCACCGCTTCTGTCTTAACTTGGCTTCTCAAGTACTTACACGACCACCCCAATCTCCTCCAAGAAGTCTCCAGGGAGCAATTCAGCATTCGACAGAAAATAAAAAAAGAAAACCGAAGAATCTCATGGGAAGATACAAGAAAAATGCCACTGACCACTAGGGTGATACAAGAGACACTAAGAGCAGCAAGTGTACTGTCCTTTACATTTAGAGAAGCAGTACAAGACGTCGAATATGATGGCTACTTGATCCCAAAGGGTTGGAAGGTTCTTCCTCTTTTCCGGCGAATCCATCACTCCTCCGAATTCTTCCCCGATCCTGAAAAATTCGATCCTTCTAGATTCGAGGTGGCACCAAAACCTTACACGTACATGCCATTCGGAAATGGAGTGCACTCATGTCCAGGAAGTGAGCTGGCTAAACTTGAGATGCTTATCCTCCTTCACCACCTCACTACTTCCTTCAGATGGGAAGTGATTGGAGATGAAGAAGGTATACAGTATGGTCCTTTCCCTGTACCCAAGAAGGGTTTACCAATAAGAGTAACCCCGATTTAA

Protein Analysis

482

Amino Acids

55.18

Weight (kDa)

9.19

Isoelectric Point (pI)

55.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 50 - 320 1.3e-29 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010495)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 524, 1122
AccB1I GGYRCC 1 cut(s) 1243
AccI GTMKAC 1 cut(s) 1387
AciI CCGC 5 cut(s) 190, 305, 430, 882, 897
AclWI GGATC 4 cut(s) 825, 1135, 1202, 1217
AcsI RAATTY 3 cut(s) 28, 1196, 1217
AcuI CTGAAG 1 cut(s) 1339
AcyI GRCGYC 2 cut(s) 521, 1119
AfaI GTAC 7 cut(s) 242, 801, 926, 1086, 1113, 1262, 1410
AfiI CCNNNNNNNGG 4 cut(s) 176, 429, 1359, 1418
AflII CTTAAG 2 cut(s) 425, 835
AflIII ACRYGT 1 cut(s) 1257
AgsI TTSAA 3 cut(s) 27, 256, 343
AhdI GACNNNNNGTC 1 cut(s) 473
AjnI CCWGG 3 cut(s) 151, 962, 1294
AjuI GAANNNNNNNTTGG 2 cut(s) 203, 235
AleI CACNNNNGTG 1 cut(s) 1052
AluBI AGCT 4 cut(s) 332, 490, 634, 1306
AluI AGCT 4 cut(s) 332, 490, 634, 1306
Alw21I GWGCWC 2 cut(s) 492, 1287
Alw26I GTCTC 5 cut(s) 176, 481, 653, 964, 1058
Alw44I GTGCAC 1 cut(s) 1283
AlwI GGATC 4 cut(s) 825, 1135, 1202, 1217
ApaLI GTGCAC 1 cut(s) 1283
ApeKI GCWGC 1 cut(s) 1076
ApoI RAATTY 3 cut(s) 28, 1196, 1217
AspS9I GGNCC 4 cut(s) 380, 407, 436, 1397
AsuC2I CCSGG 1 cut(s) 687
AsuHPI GGTGA 2 cut(s) 1066, 1328
AvaII GGWCC 4 cut(s) 380, 407, 436, 1397
BaeGI GKGCMC 2 cut(s) 692, 1287
BanI GGYRCC 1 cut(s) 1243
BanII GRGCYC 2 cut(s) 492, 612
BarI GAAGNNNNNNTAC 2 cut(s) 1371, 1403
BbsI GAAGAC 2 cut(s) 15, 435
Bbv12I GWGCWC 2 cut(s) 492, 1287
BbvI GCAGC 1 cut(s) 1088
BccI CCATC 4 cut(s) 542, 1124, 1191, 1353
BceAI ACGGC 2 cut(s) 158, 847
BciT130I CCWGG 3 cut(s) 153, 964, 1296
BcnI CCSGG 1 cut(s) 687
BcoDI GTCTC 5 cut(s) 176, 481, 653, 964, 1058
BfaI CTAG 2 cut(s) 1050, 1230
BfrI CTTAAG 2 cut(s) 425, 835
BisI GCNGC 4 cut(s) 306, 431, 882, 1077
BlsI GCNGC 4 cut(s) 307, 432, 883, 1078
BmcAI AGTACT 2 cut(s) 801, 926
Bme1390I CCNGG 4 cut(s) 153, 687, 964, 1296
Bme18I GGWCC 4 cut(s) 380, 407, 436, 1397
BmeRI GACNNNNNGTC 1 cut(s) 473
BmgT120I GGNCC 4 cut(s) 380, 407, 436, 1397
BmiI GGNNCC 3 cut(s) 157, 609, 1245
BmrFI CCNGG 4 cut(s) 153, 687, 964, 1296
BmsI GCATC 1 cut(s) 1311
BpiI GAAGAC 2 cut(s) 15, 435
BplI GAGNNNNNCTC 4 cut(s) 171, 203, 316, 348
BpmI CTGGAG 1 cut(s) 946
BpuEI CTTGAG 2 cut(s) 905, 1337
BpuMI CCSGG 1 cut(s) 687
BsaAI YACGTR 1 cut(s) 1260
BsaBI GATNNNNATC 1 cut(s) 1325
BsaHI GRCGYC 2 cut(s) 521, 1119
BsaJI CCNNGG 3 cut(s) 159, 403, 963
BsaXI ACNNNNNCTCC 2 cut(s) 340, 370
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 429, 1359, 1418
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 2 cut(s) 128, 439
Bse8I GATNNNNATC 1 cut(s) 1325
BseBI CCWGG 3 cut(s) 153, 964, 1296
BseDI CCNNGG 3 cut(s) 159, 403, 963
BseGI GGATG 1 cut(s) 278
BseJI GATNNNNATC 1 cut(s) 1325
BseLI CCNNNNNNNGG 4 cut(s) 176, 429, 1359, 1418
BseMII CTCAG 1 cut(s) 478
BseNI ACTGG 2 cut(s) 128, 439
BseRI GAGGAG 3 cut(s) 620, 938, 1180
BseSI GKGCMC 2 cut(s) 692, 1287
BseXI GCAGC 1 cut(s) 1088
BshNI GGYRCC 1 cut(s) 1243
BsiHKAI GWGCWC 2 cut(s) 492, 1287
BsiSI CCGG 3 cut(s) 59, 686, 1174
BslFI GGGAC 2 cut(s) 508, 611
BslI CCNNNNNNNGG 4 cut(s) 176, 429, 1359, 1418
BsmAI GTCTC 5 cut(s) 176, 481, 653, 964, 1058
BsmBI CGTCTC 2 cut(s) 481, 653
BsmFI GGGAC 2 cut(s) 508, 611
BsmI GAATGC 2 cut(s) 566, 978
Bsp1286I GDGCHC 4 cut(s) 492, 612, 692, 1287
Bsp143I GATC 5 cut(s) 579, 817, 1140, 1207, 1222
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 5 cut(s) 190, 305, 430, 882, 897
BspCNI CTCAG 1 cut(s) 477
BspLI GGNNCC 3 cut(s) 157, 609, 1245
BspPI GGATC 4 cut(s) 825, 1135, 1202, 1217
BspT107I GGYRCC 1 cut(s) 1243
BspTI CTTAAG 2 cut(s) 425, 835
BsrFI RCCGGY 1 cut(s) 58
BsrI ACTGG 2 cut(s) 128, 439
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 3 cut(s) 159, 403, 963
BssMI GATC 5 cut(s) 579, 817, 1140, 1207, 1222
BssNAI GTATAC 1 cut(s) 1388
BssNI GRCGYC 2 cut(s) 521, 1119
BssT1I CCWWGG 2 cut(s) 159, 403
Bst1107I GTATAC 1 cut(s) 1388
Bst2UI CCWGG 3 cut(s) 153, 964, 1296
Bst4CI ACNGT 3 cut(s) 475, 1089, 1392
Bst6I CTCTTC 3 cut(s) 43, 752, 757
BstACI GRCGYC 2 cut(s) 521, 1119
BstAFI CTTAAG 2 cut(s) 425, 835
BstBAI YACGTR 1 cut(s) 1260
BstC8I GCNNGC 1 cut(s) 1308
BstDEI CTNAG 3 cut(s) 464, 740, 1070
BstDSI CCRYGG 1 cut(s) 159
BstF5I GGATG 1 cut(s) 278
BstKTI GATC 5 cut(s) 582, 820, 1143, 1210, 1225
BstMAI GTCTC 5 cut(s) 176, 481, 653, 964, 1058
BstMBI GATC 5 cut(s) 579, 817, 1140, 1207, 1222
BstNI CCWGG 3 cut(s) 153, 964, 1296
BstNSI RCATGY 1 cut(s) 1267
BstSCI CCNGG 4 cut(s) 151, 685, 962, 1294
BstSLI GKGCMC 2 cut(s) 692, 1287
BstV1I GCAGC 1 cut(s) 1088
BstV2I GAAGAC 2 cut(s) 15, 435
BstXI CCANNNNNNTGG 1 cut(s) 1152
BstZ17I GTATAC 1 cut(s) 1388
BtgI CCRYGG 1 cut(s) 159
BtsCI GGATG 1 cut(s) 278
BtsIMutI CAGTG 2 cut(s) 121, 1040
Cac8I GCNNGC 1 cut(s) 1308
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 4 cut(s) 380, 407, 436, 1397
CseI GACGC 1 cut(s) 268
Csp6I GTAC 7 cut(s) 241, 800, 925, 1085, 1112, 1261, 1409
CspCI CAANNNNNGTGG 2 cut(s) 601, 636
CviQI GTAC 7 cut(s) 241, 800, 925, 1085, 1112, 1261, 1409
DdeI CTNAG 3 cut(s) 464, 740, 1070
DpnI GATC 5 cut(s) 581, 819, 1142, 1209, 1224
DpnII GATC 5 cut(s) 579, 817, 1140, 1207, 1222
DraI TTTAAA 1 cut(s) 109
DriI GACNNNNNGTC 1 cut(s) 473
Eam1104I CTCTTC 3 cut(s) 43, 752, 757
Eam1105I GACNNNNNGTC 1 cut(s) 473
EarI CTCTTC 3 cut(s) 43, 752, 757
EciI GGCGGA 1 cut(s) 179
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 2 cut(s) 159, 403
Eco24I GRGCYC 2 cut(s) 492, 612
Eco47I GGWCC 4 cut(s) 380, 407, 436, 1397
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 1 cut(s) 1339
EcoICRI GAGCTC 1 cut(s) 490
EcoRI GAATTC 1 cut(s) 1196
EcoRII CCWGG 3 cut(s) 151, 962, 1294
EcoT14I CCWWGG 2 cut(s) 159, 403
EcoT22I ATGCAT 1 cut(s) 568
EcoT38I GRGCYC 2 cut(s) 492, 612
ErhI CCWWGG 2 cut(s) 159, 403
Esp3I CGTCTC 2 cut(s) 481, 653
FaqI GGGAC 2 cut(s) 508, 611
FblI GTMKAC 1 cut(s) 1387
Fnu4HI GCNGC 4 cut(s) 306, 431, 882, 1077
FokI GGATG 1 cut(s) 285
FriOI GRGCYC 2 cut(s) 492, 612
Fsp4HI GCNGC 4 cut(s) 306, 431, 882, 1077
FspBI CTAG 2 cut(s) 1050, 1230
GluI GCNGC 4 cut(s) 306, 431, 882, 1077
GsuI CTGGAG 1 cut(s) 946
HapII CCGG 3 cut(s) 59, 686, 1174
HgaI GACGC 1 cut(s) 268
Hin1I GRCGYC 2 cut(s) 521, 1119
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 4 cut(s) 842, 1011, 1179, 1233
HpaII CCGG 3 cut(s) 59, 686, 1174
HphI GGTGA 2 cut(s) 1066, 1328
Hpy166II GTNNAC 4 cut(s) 1085, 1285, 1388, 1424
Hpy188I TCNGA 5 cut(s) 179, 467, 1195, 1274, 1358
Hpy188III TCNNGA 6 cut(s) 256, 299, 650, 677, 1211, 1230
Hpy8I GTNNAC 4 cut(s) 1085, 1285, 1388, 1424
Hpy99I CGWCG 1 cut(s) 1124
HpyCH4III ACNGT 3 cut(s) 475, 1089, 1392
HpyCH4IV ACGT 4 cut(s) 521, 646, 1119, 1259
HpyCH4V TGCA 4 cut(s) 4, 121, 566, 1285
HpyF3I CTNAG 3 cut(s) 464, 740, 1070
HpySE526I ACGT 4 cut(s) 521, 646, 1119, 1259
Hsp92I GRCGYC 2 cut(s) 521, 1119
Kzo9I GATC 5 cut(s) 579, 817, 1140, 1207, 1222
LmnI GCTCC 5 cut(s) 161, 495, 607, 809, 967
Lsp1109I GCAGC 1 cut(s) 1088
LweI GCATC 1 cut(s) 1311
MaeI CTAG 2 cut(s) 1050, 1230
MaeII ACGT 4 cut(s) 521, 646, 1119, 1259
MaeIII GTNAC 3 cut(s) 99, 659, 1435
MalI GATC 5 cut(s) 581, 819, 1142, 1209, 1224
MboI GATC 5 cut(s) 579, 817, 1140, 1207, 1222
MfeI CAATTG 1 cut(s) 78
MhlI GDGCHC 4 cut(s) 492, 612, 692, 1287
MluCI AATT 7 cut(s) 28, 78, 211, 725, 971, 1196, 1217
MmeI TCCRAC 1 cut(s) 1133
Mph1103I ATGCAT 1 cut(s) 568
MseI TTAA 8 cut(s) 74, 108, 426, 630, 728, 836, 908, 1447
MslI CAYNNNNRTG 2 cut(s) 1052, 1262
MspCI CTTAAG 2 cut(s) 425, 835
MspI CCGG 3 cut(s) 59, 686, 1174
MspR9I CCNGG 4 cut(s) 153, 687, 964, 1296
MunI CAATTG 1 cut(s) 78
Mva1269I GAATGC 2 cut(s) 566, 978
MvaI CCWGG 3 cut(s) 153, 964, 1296
NciI CCSGG 1 cut(s) 687
NcoI CCATGG 1 cut(s) 159
NdeII GATC 5 cut(s) 579, 817, 1140, 1207, 1222
NlaIV GGNNCC 3 cut(s) 157, 609, 1245
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 1 cut(s) 1267
OliI CACNNNNGTG 1 cut(s) 1052
PcsI WCGNNNNNNNCGW 1 cut(s) 885
PctI GAATGC 2 cut(s) 566, 978
PfeI GAWTC 4 cut(s) 842, 1011, 1179, 1233
PfoI TCCNGGA 1 cut(s) 1294
PkrI GCNGC 4 cut(s) 307, 432, 883, 1078
Ppu21I YACGTR 1 cut(s) 1260
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 3 cut(s) 151, 962, 1294
PspGI CCWGG 3 cut(s) 151, 962, 1294
PspN4I GGNNCC 3 cut(s) 157, 609, 1245
PspPI GGNCC 4 cut(s) 380, 407, 436, 1397
RsaI GTAC 7 cut(s) 242, 801, 926, 1086, 1113, 1262, 1410
RsaNI GTAC 7 cut(s) 241, 800, 925, 1085, 1112, 1261, 1409
RseI CAYNNNNRTG 2 cut(s) 1052, 1262
SacI GAGCTC 1 cut(s) 492
SaqAI TTAA 8 cut(s) 74, 108, 426, 630, 728, 836, 908, 1447
SatI GCNGC 4 cut(s) 306, 431, 882, 1077
Sau3AI GATC 5 cut(s) 579, 817, 1140, 1207, 1222
Sau96I GGNCC 4 cut(s) 380, 407, 436, 1397
ScaI AGTACT 2 cut(s) 801, 926
ScrFI CCNGG 4 cut(s) 153, 687, 964, 1296
SduI GDGCHC 4 cut(s) 492, 612, 692, 1287
SfaNI GCATC 1 cut(s) 1311
SinI GGWCC 4 cut(s) 380, 407, 436, 1397
SmiI ATTTAAAT 1 cut(s) 109
SmiMI CAYNNNNRTG 2 cut(s) 1052, 1262
SmlI CTYRAG 4 cut(s) 425, 835, 920, 1316
SmoI CTYRAG 4 cut(s) 425, 835, 920, 1316
Sse9I AATT 7 cut(s) 28, 78, 211, 725, 971, 1196, 1217
SsiI CCGC 5 cut(s) 190, 305, 430, 882, 897
SspMI CTAG 2 cut(s) 1050, 1230
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 4 cut(s) 151, 685, 962, 1294
StyI CCWWGG 2 cut(s) 159, 403
SwaI ATTTAAAT 1 cut(s) 109
TaaI ACNGT 3 cut(s) 475, 1089, 1392
TaiI ACGT 4 cut(s) 524, 649, 1122, 1262
TasI AATT 7 cut(s) 28, 78, 211, 725, 971, 1196, 1217
TatI WGTACW 4 cut(s) 799, 924, 1084, 1111
TauI GCSGC 3 cut(s) 308, 433, 884
TfiI GAWTC 4 cut(s) 842, 1011, 1179, 1233
Tru1I TTAA 8 cut(s) 74, 108, 426, 630, 728, 836, 908, 1447
Tru9I TTAA 8 cut(s) 74, 108, 426, 630, 728, 836, 908, 1447
TscAI CASTG 2 cut(s) 128, 1047
TseI GCWGC 1 cut(s) 1076
TspDTI ATGAA 7 cut(s) 6, 69, 439, 569, 689, 725, 1392
TspRI CASTG 2 cut(s) 128, 1047
Vha464I CTTAAG 2 cut(s) 425, 835
VneI GTGCAC 1 cut(s) 1283
VpaK11BI GGWCC 4 cut(s) 380, 407, 436, 1397
XapI RAATTY 3 cut(s) 28, 1196, 1217
XbaI TCTAGA 1 cut(s) 1229
XceI RCATGY 1 cut(s) 1267
XmiI GTMKAC 1 cut(s) 1387
XspI CTAG 2 cut(s) 1050, 1230
ZraI GACGTC 2 cut(s) 522, 1120
ZrmI AGTACT 2 cut(s) 801, 926
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.