FvH4_3g36810

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
31518833 .. 31523787
4955 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36810.t1

Sequence Viewer

Length: 1452 bp
ATGCAACTTTTCTCATCATCACCTCCTTTCTGTTCAGCTCTGCACTCAGACTTTGGACTAGTCTTGATACCAATCCTTCTGCTCTTGGGCTTGTTCCTTATCCAATGGCAGTACCCCAGATTCTACAGGCGCCTCCCCCCTGGTTCAATGGGTTGGCCGTTTTTTGGAGAGACTTTCGAGCTCTACACTGAAAATCCAAATTCTTTCTTCTCAGTCCGGCAGAAACGGTATGGGAGTATATTCAAGAGCCATGTTTTGGGGTGTCCCTGTGTGATGATAACGAGCCCAGAAGCAGCAAAAATGGTACTGGTGACTCAAGCTCATCTCTTTAAGCCAACTTACCCTGTAGGCAAAGAGAGGATGATAGGGCCGGAAGCTATATTCTTCCACCAAGGGGCCTATCACTCGAAGCTAAAGAAGGTGGTTCAGGCTTCACTTTTGCCCTCTGCAATAAAAGGTTCAGTCTCAGAGATTGAGCAAATTGTTCTAAAGCTACTTCCCACATGGAAGAAGAACACCATTAACACTTTGCAAGAGATGAAGAGGTATGCTTTCGATGTGGCAATGATTTCAGTTTTAGGCAACAAAAGGGGGATTGAAGGGGAAGGGATTAAACATCTGTATCATTGCATTGAGAAGGGTTATAATTCCATGGCTCTTGATCTACCTGGAACTCCCTTCCACAAAGCCATGAAGGCAAGGAAGCTTCTGAATAAGACATTGAGAGAACTGATACAAAAGAGAAGGGAGAGTGGTGATGTGCAAAGTGGTGGATTGCTGCAAGACCTGTTGAGAGCAAAAGATCAGAAACTTAAGCTGAACCTCAGTGATTCTCAAATTGCTGATAATATCATTGGAGTTATCTTTGCTGCTCATGATACCACTGCTAGCGTTCTAACATGGCTCCTGAAGTATCTTCATGACAATGACGATCTCCTAGAACGTGTTACGAGGGAACAAGAAGCAATTCAACGAAAAATGTTGATTGAGAAACGGGGGTTTACGTGGGATGATACTAGACGTATGCCTTTGACAAATCAGGTGATTCAAGAGACTCTAAGAACAGCAAGTATACTGTCATTCACATTCAGAGAGGCAGTGGAAGACGTGGAGTTTGAGGGATACTTTATCCCTAGAGGTTGGAAGGTGCTGCCTCTTTTCAGAAGCATCCATCACTGTGCAGATTTCTTCCCTCAGCCTGAGAAGTTTGACCCTTCAAGATTTGAGGTTCCACCTCGACCCAACACTTTCATGCCCTTTGGAAATGGCGTGCATTCCTGTCCAGGCAGCGAGCTTGCCAAGATTGAGATGCTGATCCTCCTCCACCACCTCACAACTACTTACAGGTGGCACCTGATGAGCCACGACGATGGGATTGAGTATGGTCCTTTCCCAGTTCCCAAACAGGGATTACCTATCAAAGTGACTCTCAGGAACAAGAATAAGACCTGA

Protein Analysis

484

Amino Acids

55.31

Weight (kDa)

9.36

Isoelectric Point (pI)

50.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 457 3.6e-73 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010495)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 645
AccB1I GGYRCC 2 cut(s) 129, 1350
AccB7I CCANNNNNTGG 1 cut(s) 256
AccI GTMKAC 1 cut(s) 1072
AclWI GGATC 1 cut(s) 1309
AcoI YGGCCR 1 cut(s) 155
AcsI RAATTY 1 cut(s) 199
AcuI CTGAAG 1 cut(s) 929
AcyI GRCGYC 1 cut(s) 130
AfaI GTAC 2 cut(s) 113, 306
AfiI CCNNNNNNNGG 4 cut(s) 164, 256, 394, 1406
AflII CTTAAG 1 cut(s) 812
AflIII ACRYGT 1 cut(s) 943
AgsI TTSAA 6 cut(s) 147, 244, 599, 971, 1049, 1218
AhlI ACTAGT 1 cut(s) 58
AjiI CACGTC 1 cut(s) 1108
AjnI CCWGG 3 cut(s) 139, 667, 1282
AluBI AGCT 9 cut(s) 38, 181, 320, 377, 412, 493, 706, 817, 1294
AluI AGCT 9 cut(s) 38, 181, 320, 377, 412, 493, 706, 817, 1294
Alw21I GWGCWC 1 cut(s) 183
Alw26I GTCTC 3 cut(s) 164, 469, 1046
AlwI GGATC 1 cut(s) 1309
AoxI GGCC 3 cut(s) 155, 368, 396
ApeKI GCWGC 5 cut(s) 293, 778, 869, 1150, 1287
ApoI RAATTY 1 cut(s) 199
ArsI GACNNNNNNTTYG 2 cut(s) 1097, 1129
Asp700I GAANNNNTTC 1 cut(s) 966
AspLEI GCGC 1 cut(s) 132
AspS9I GGNCC 3 cut(s) 368, 396, 1385
AsuHPI GGTGA 4 cut(s) 12, 322, 767, 1054
AsuNHI GCTAGC 1 cut(s) 887
AvaII GGWCC 1 cut(s) 1385
BaeI ACNNNNGTAYC 2 cut(s) 605, 638
BanI GGYRCC 2 cut(s) 129, 1350
BanII GRGCYC 2 cut(s) 183, 287
BbsI GAAGAC 1 cut(s) 1110
Bbv12I GWGCWC 1 cut(s) 183
BbvCI CCTCAGC 1 cut(s) 1194
BbvI GCAGC 5 cut(s) 305, 765, 856, 1137, 1299
BccI CCATC 2 cut(s) 1179, 1364
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 3 cut(s) 141, 669, 1284
BciVI GTATCC 1 cut(s) 1115
BcoDI GTCTC 3 cut(s) 164, 469, 1046
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 5 cut(s) 59, 888, 938, 1017, 1134
BfmI CTRYAG 2 cut(s) 124, 345
BfoI RGCGCY 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 812
BfuI GTATCC 1 cut(s) 1115
BglI GCCNNNNNGGC 1 cut(s) 695
BisI GCNGC 5 cut(s) 294, 779, 870, 1151, 1288
BlsI GCNGC 5 cut(s) 295, 780, 871, 1152, 1289
Bme1390I CCNGG 3 cut(s) 141, 669, 1284
Bme18I GGWCC 1 cut(s) 1385
BmgBI CACGTC 1 cut(s) 1108
BmgT120I GGNCC 3 cut(s) 368, 396, 1385
BmiI GGNNCC 5 cut(s) 131, 397, 905, 1230, 1352
BmrFI CCNGG 3 cut(s) 141, 669, 1284
BmrI ACTGGG 1 cut(s) 1388
BmsI GCATC 2 cut(s) 1176, 1299
BmtI GCTAGC 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 1388
BpiI GAAGAC 1 cut(s) 1110
Bpu10I CCTNAGC 1 cut(s) 1194
BpuEI CTTGAG 1 cut(s) 300
BsaAI YACGTR 1 cut(s) 1005
BsaBI GATNNNNATC 2 cut(s) 71, 1313
BsaHI GRCGYC 1 cut(s) 130
BsaJI CCNNGG 3 cut(s) 139, 391, 651
Bsc4I CCNNNNNNNGG 4 cut(s) 164, 256, 394, 1406
Bse1I ACTGG 2 cut(s) 312, 1394
Bse3DI GCAATG 2 cut(s) 570, 625
Bse8I GATNNNNATC 2 cut(s) 71, 1313
BseBI CCWGG 3 cut(s) 141, 669, 1284
BseDI CCNNGG 3 cut(s) 139, 391, 651
BseGI GGATG 3 cut(s) 366, 1015, 1167
BseJI GATNNNNATC 2 cut(s) 71, 1313
BseLI CCNNNNNNNGG 4 cut(s) 164, 256, 394, 1406
BseMI GCAATG 2 cut(s) 570, 625
BseMII CTCAG 7 cut(s) 60, 225, 480, 838, 1191, 1208, 1444
BseNI ACTGG 2 cut(s) 312, 1394
BseRI GAGGAG 1 cut(s) 1310
BseXI GCAGC 5 cut(s) 305, 765, 856, 1137, 1299
BsgI GTGCAG 2 cut(s) 26, 1200
BshFI GGCC 3 cut(s) 157, 370, 398
BshNI GGYRCC 2 cut(s) 129, 1350
BsiHKAI GWGCWC 1 cut(s) 183
BsiSI CCGG 2 cut(s) 217, 371
BslFI GGGAC 1 cut(s) 249
BslI CCNNNNNNNGG 4 cut(s) 164, 256, 394, 1406
BsmAI GTCTC 3 cut(s) 164, 469, 1046
BsmFI GGGAC 1 cut(s) 249
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 3 cut(s) 157, 370, 398
Bsp1286I GDGCHC 2 cut(s) 183, 287
Bsp143I GATC 4 cut(s) 661, 802, 931, 1314
Bsp19I CCATGG 1 cut(s) 651
BspANI GGCC 3 cut(s) 157, 370, 398
BspCNI CTCAG 7 cut(s) 59, 224, 479, 837, 1192, 1207, 1443
BspHI TCATGA 2 cut(s) 874, 919
BspLI GGNNCC 5 cut(s) 131, 397, 905, 1230, 1352
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 1 cut(s) 1309
BspT107I GGYRCC 2 cut(s) 129, 1350
BspTI CTTAAG 1 cut(s) 812
BsrDI GCAATG 2 cut(s) 570, 625
BsrI ACTGG 2 cut(s) 312, 1394
BssECI CCNNGG 3 cut(s) 139, 391, 651
BssMI GATC 4 cut(s) 661, 802, 931, 1314
BssNAI GTATAC 1 cut(s) 1073
BssNI GRCGYC 1 cut(s) 130
BssT1I CCWWGG 2 cut(s) 391, 651
Bst1107I GTATAC 1 cut(s) 1073
Bst2UI CCWGG 3 cut(s) 141, 669, 1284
Bst4CI ACNGT 3 cut(s) 228, 1077, 1178
Bst6I CTCTTC 1 cut(s) 536
BstACI GRCGYC 1 cut(s) 130
BstAFI CTTAAG 1 cut(s) 812
BstBAI YACGTR 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 889, 1271, 1292, 1296
BstDEI CTNAG 8 cut(s) 46, 211, 466, 824, 1058, 1194, 1200, 1430
BstDSI CCRYGG 1 cut(s) 651
BstF5I GGATG 3 cut(s) 366, 1015, 1167
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 1 cut(s) 132
BstKTI GATC 4 cut(s) 664, 805, 934, 1317
BstMAI GTCTC 3 cut(s) 164, 469, 1046
BstMBI GATC 4 cut(s) 661, 802, 931, 1314
BstMWI GCNNNNNNNGC 1 cut(s) 695
BstNI CCWGG 3 cut(s) 141, 669, 1284
BstSCI CCNGG 3 cut(s) 139, 667, 1282
BstSFI CTRYAG 2 cut(s) 124, 345
BstV1I GCAGC 5 cut(s) 305, 765, 856, 1137, 1299
BstV2I GAAGAC 1 cut(s) 1110
BstXI CCANNNNNNTGG 1 cut(s) 1370
BstZ17I GTATAC 1 cut(s) 1073
BsuI GTATCC 1 cut(s) 1115
BsuRI GGCC 3 cut(s) 157, 370, 398
BtgI CCRYGG 1 cut(s) 651
BtrI CACGTC 1 cut(s) 1108
BtsCI GGATG 3 cut(s) 366, 1015, 1167
BtsI GCAGTG 2 cut(s) 882, 1104
BtsIMutI CAGTG 5 cut(s) 186, 832, 882, 1104, 1174
Cac8I GCNNGC 4 cut(s) 889, 1271, 1292, 1296
CciI TCATGA 2 cut(s) 874, 919
CfoI GCGC 1 cut(s) 132
Cfr13I GGNCC 3 cut(s) 368, 396, 1385
Csp6I GTAC 2 cut(s) 112, 305
CviAII CATG 8 cut(s) 251, 504, 652, 691, 875, 900, 920, 1252
CviQI GTAC 2 cut(s) 112, 305
DdeI CTNAG 8 cut(s) 46, 211, 466, 824, 1058, 1194, 1200, 1430
DinI GGCGCC 1 cut(s) 131
DpnI GATC 4 cut(s) 663, 804, 933, 1316
DpnII GATC 4 cut(s) 661, 802, 931, 1314
EaeI YGGCCR 1 cut(s) 155
Eam1104I CTCTTC 1 cut(s) 536
EarI CTCTTC 1 cut(s) 536
Ecl136II GAGCTC 1 cut(s) 181
Eco130I CCWWGG 2 cut(s) 391, 651
Eco24I GRGCYC 2 cut(s) 183, 287
Eco47I GGWCC 1 cut(s) 1385
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 929
EcoICRI GAGCTC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 396
EcoRII CCWGG 3 cut(s) 139, 667, 1282
EcoT14I CCWWGG 2 cut(s) 391, 651
EcoT38I GRGCYC 2 cut(s) 183, 287
EgeI GGCGCC 1 cut(s) 131
EheI GGCGCC 1 cut(s) 131
ErhI CCWWGG 2 cut(s) 391, 651
FaeI CATG 8 cut(s) 254, 507, 655, 694, 878, 903, 923, 1255
FaqI GGGAC 1 cut(s) 249
FatI CATG 8 cut(s) 250, 503, 651, 690, 874, 899, 919, 1251
FblI GTMKAC 1 cut(s) 1072
Fnu4HI GCNGC 5 cut(s) 294, 779, 870, 1151, 1288
FokI GGATG 3 cut(s) 373, 1022, 1154
FriOI GRGCYC 2 cut(s) 183, 287
Fsp4HI GCNGC 5 cut(s) 294, 779, 870, 1151, 1288
FspBI CTAG 5 cut(s) 59, 888, 938, 1017, 1134
GlaI GCGC 1 cut(s) 131
GluI GCNGC 5 cut(s) 294, 779, 870, 1151, 1288
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 3 cut(s) 157, 370, 398
HapII CCGG 2 cut(s) 217, 371
HhaI GCGC 1 cut(s) 132
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 8 cut(s) 254, 507, 655, 694, 878, 903, 923, 1255
Hin6I GCGC 1 cut(s) 130
HinP1I GCGC 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 6 cut(s) 120, 313, 830, 1045, 1054, 1426
HpaII CCGG 2 cut(s) 217, 371
HphI GGTGA 4 cut(s) 12, 322, 767, 1054
Hpy166II GTNNAC 2 cut(s) 1002, 1073
Hpy188I TCNGA 6 cut(s) 49, 469, 711, 807, 1091, 1163
Hpy188III TCNNGA 9 cut(s) 64, 244, 659, 875, 907, 920, 1049, 1218, 1432
Hpy8I GTNNAC 2 cut(s) 1002, 1073
Hpy99I CGWCG 1 cut(s) 1370
HpyCH4III ACNGT 3 cut(s) 228, 1077, 1178
HpyCH4IV ACGT 4 cut(s) 943, 1004, 1021, 1107
HpyCH4V TGCA 9 cut(s) 4, 43, 449, 532, 630, 763, 781, 1181, 1273
HpyF10VI GCNNNNNNNGC 1 cut(s) 695
HpyF3I CTNAG 8 cut(s) 46, 211, 466, 824, 1058, 1194, 1200, 1430
HpySE526I ACGT 4 cut(s) 943, 1004, 1021, 1107
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 8 cut(s) 254, 507, 655, 694, 878, 903, 923, 1255
HspAI GCGC 1 cut(s) 130
KasI GGCGCC 1 cut(s) 129
Kzo9I GATC 4 cut(s) 661, 802, 931, 1314
LmnI GCTCC 1 cut(s) 909
Lsp1109I GCAGC 5 cut(s) 305, 765, 856, 1137, 1299
LweI GCATC 2 cut(s) 1176, 1299
MaeI CTAG 5 cut(s) 59, 888, 938, 1017, 1134
MaeII ACGT 4 cut(s) 943, 1004, 1021, 1107
MaeIII GTNAC 3 cut(s) 310, 946, 1423
MalI GATC 4 cut(s) 663, 804, 933, 1316
MboI GATC 4 cut(s) 661, 802, 931, 1314
MboII GAAGA 8 cut(s) 199, 376, 520, 523, 553, 908, 1115, 1180
MhlI GDGCHC 2 cut(s) 183, 287
MluCI AATT 5 cut(s) 199, 480, 646, 837, 966
Mly113I GGCGCC 1 cut(s) 130
MlyI GAGTC 3 cut(s) 307, 1048, 1420
MmeI TCCRAC 1 cut(s) 1121
MroXI GAANNNNTTC 1 cut(s) 966
MseI TTAA 4 cut(s) 330, 522, 612, 813
MslI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1368
MspCI CTTAAG 1 cut(s) 812
MspI CCGG 2 cut(s) 217, 371
MspR9I CCNGG 3 cut(s) 141, 669, 1284
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 3 cut(s) 141, 669, 1284
MwoI GCNNNNNNNGC 1 cut(s) 695
NarI GGCGCC 1 cut(s) 130
NcoI CCATGG 1 cut(s) 651
NdeII GATC 4 cut(s) 661, 802, 931, 1314
NheI GCTAGC 1 cut(s) 887
NlaIII CATG 8 cut(s) 254, 507, 655, 694, 878, 903, 923, 1255
NlaIV GGNNCC 5 cut(s) 131, 397, 905, 1230, 1352
NmuCI GTSAC 2 cut(s) 310, 1423
PagI TCATGA 2 cut(s) 874, 919
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 1 cut(s) 966
PfeI GAWTC 3 cut(s) 120, 830, 1045
PflMI CCANNNNNTGG 1 cut(s) 256
PkrI GCNGC 5 cut(s) 295, 780, 871, 1152, 1289
PleI GAGTC 3 cut(s) 307, 1048, 1420
PluTI GGCGCC 1 cut(s) 133
PpsI GAGTC 3 cut(s) 307, 1048, 1420
Ppu21I YACGTR 1 cut(s) 1005
PsiI TTATAA 1 cut(s) 645
Psp124BI GAGCTC 1 cut(s) 183
Psp6I CCWGG 3 cut(s) 139, 667, 1282
PspGI CCWGG 3 cut(s) 139, 667, 1282
PspN4I GGNNCC 5 cut(s) 131, 397, 905, 1230, 1352
PspPI GGNCC 3 cut(s) 368, 396, 1385
RsaI GTAC 2 cut(s) 113, 306
RsaNI GTAC 2 cut(s) 112, 305
RseI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1368
SacI GAGCTC 1 cut(s) 183
SaqAI TTAA 4 cut(s) 330, 522, 612, 813
SatI GCNGC 5 cut(s) 294, 779, 870, 1151, 1288
Sau3AI GATC 4 cut(s) 661, 802, 931, 1314
Sau96I GGNCC 3 cut(s) 368, 396, 1385
SchI GAGTC 3 cut(s) 307, 1048, 1420
ScrFI CCNGG 3 cut(s) 141, 669, 1284
SduI GDGCHC 2 cut(s) 183, 287
SfaNI GCATC 2 cut(s) 1176, 1299
SfcI CTRYAG 2 cut(s) 124, 345
SfoI GGCGCC 1 cut(s) 131
SinI GGWCC 1 cut(s) 1385
SmiMI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1368
SmlI CTYRAG 2 cut(s) 315, 812
SmoI CTYRAG 2 cut(s) 315, 812
SpeI ACTAGT 1 cut(s) 58
Sse9I AATT 5 cut(s) 199, 480, 646, 837, 966
SspDI GGCGCC 1 cut(s) 129
SspMI CTAG 5 cut(s) 59, 888, 938, 1017, 1134
SstI GAGCTC 1 cut(s) 183
StyD4I CCNGG 3 cut(s) 139, 667, 1282
StyI CCWWGG 2 cut(s) 391, 651
TaaI ACNGT 3 cut(s) 228, 1077, 1178
TaiI ACGT 4 cut(s) 946, 1007, 1024, 1110
TaqI TCGA 4 cut(s) 177, 407, 555, 1237
TasI AATT 5 cut(s) 199, 480, 646, 837, 966
TfiI GAWTC 3 cut(s) 120, 830, 1045
Tru1I TTAA 4 cut(s) 330, 522, 612, 813
Tru9I TTAA 4 cut(s) 330, 522, 612, 813
TscAI CASTG 5 cut(s) 193, 832, 889, 1104, 1181
TseFI GTSAC 2 cut(s) 310, 1423
TseI GCWGC 5 cut(s) 293, 778, 869, 1150, 1287
Tsp45I GTSAC 2 cut(s) 310, 1423
TspDTI ATGAA 4 cut(s) 554, 707, 908, 1240
TspRI CASTG 5 cut(s) 193, 832, 889, 1104, 1181
Van91I CCANNNNNTGG 1 cut(s) 256
Vha464I CTTAAG 1 cut(s) 812
VpaK11BI GGWCC 1 cut(s) 1385
XapI RAATTY 1 cut(s) 199
XmiI GTMKAC 1 cut(s) 1072
XmnI GAANNNNTTC 1 cut(s) 966
XspI CTAG 5 cut(s) 59, 888, 938, 1017, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.