MD03G1088100.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
7280178 .. 7287248
7071 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1088100.v1.1.491

Sequence Viewer

Length: 1443 bp
ATGCAACTTTTTGCCTCATCAACTTTTTTGCATTCTGATTTTGTTCTTCTTCTGATTCCAGTCCTGCTGCTCTTAGGCCTTGTCCTCCAATGGCGCCACCCCAAGCACAAACGCCTCCCCCCTGGCTCAATGGGTTGGCCTTACATAGGAGAGACCCTCAAGCTTTATACTGAAAACCCAAATTCTTTCTTCTCTACCAGGCAAAAACGGTATGGAAATATTTTTAAGACGCATGTATTGGGGTGTCCTTGTGTGATGATTACAAGCCCAGAAGCAGCAAGAATGGTTCTTGTGAGCCGGGCACATCTGTTCAAGCCGACCTATCCAAGAAGCAAAGAGAGAATGATAGGACCGGAAGCAATATTTTTCCACCAAGGGGCCTACCATTCAAGGTTGAAGAAGATGGTTCAGGCTTCCCTTTTGCCTTGTGCAATAAAAGAGTCGGTCTCAGAGATTGAACAAATTGTTATCAATCTTCTCCCCACTTGGAAGAACAACACCATCAACACTTTGCAAGAGATGAAGAGGTATGCTTTTGATGTGGCAATGATTTCAGCCTTCGGAAACAAAAGGGACTTTGAAATGGAAGGAATTAAACATCTGTATCAATGCCTTGAGAAAGGCTACAATTCCATGCCTCTTGATCTACCTGGAACTTCCTTTCACAAAGCCATGAAGGCAAGGAAGCTTCTCAATGAGACATTGAAAAAAATGATAGAATTAGAGAGAAGGAAGAGTCCTAAAGAAGATAGTGGTGGCTTGTTGAGAGTAATGCTGGGAGCAACAGACCAGAATAATAAGCTTAATTTGCAGCTTAGTGATTCTCAAATTGCTGACAATATCATTGGGGTCATCTTTGCTGCTCACGATACCACTGCAAGTGTCCTAACTTGGCTCATTAAATATCTCCATGACAACGCCGATCTCCTAGAAGCTGTTACTAGAGAACAAGAAGGAATTCGATGCCAATTAGTCAATGAGAATCGTGGGCTTACGTGGGATGATACTAGGCGCATGTCCTTAACTACCAGGGTGATTCAAGAAACTCTAAGAACAGCAAGTATACTGTCCTTCACATTCAGAGAAGCAGTGGAAGACGTGGAGTTCGAGGGTTATGTTATCCCTAAAGGTTGGAAGGTGCTGCCTCTATTCAGAAGCATTCATCACTGTGATGATTTCTTCCCTCAGCCCGAAAAGTTTGACCCTTCAAGATTTGAGGTTCCACCAAGACCAAACACTTTCATGCCGTTTGGAAATGGCGTGCATTCTTGTCCAGGCAGTGAGCTGGCCAAGCTTGAGATGCTCATCCTCCTCCATCACCTCACCACTGCTTACAGGTGGCAGGTGACGGGAGATGAGGACGGGATACAGTATGGCCCTTTCCCGGTACCCAAACAGGGATTACCAATAAAAGTAGTCCCAAGAAACGAGAAGGCAACTTAA

Protein Analysis

481

Amino Acids

54.87

Weight (kDa)

9.05

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 453 3.8e-71 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010495)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1333
Acc36I ACCTGC 1 cut(s) 1333
Acc65I GGTACC 1 cut(s) 1387
AccB1I GGYRCC 2 cut(s) 93, 1387
AccI GTMKAC 1 cut(s) 1063
AcoI YGGCCR 1 cut(s) 1287
AcsI RAATTY 2 cut(s) 181, 957
AcyI GRCGYC 1 cut(s) 94
AfaI GTAC 1 cut(s) 1389
AfiI CCNNNNNNNGG 4 cut(s) 146, 376, 1384, 1397
AgsI TTSAA 8 cut(s) 313, 390, 397, 458, 581, 706, 1040, 1209
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 5 cut(s) 121, 197, 649, 1028, 1273
AluBI AGCT 7 cut(s) 163, 688, 802, 814, 935, 1285, 1294
AluI AGCT 7 cut(s) 163, 688, 802, 814, 935, 1285, 1294
Alw26I GTCTC 3 cut(s) 146, 451, 692
AoxI GGCC 5 cut(s) 76, 137, 378, 1287, 1375
ApeKI GCWGC 5 cut(s) 67, 275, 811, 860, 1141
ApoI RAATTY 2 cut(s) 181, 957
ArsI GACNNNNNNTTYG 2 cut(s) 1088, 1120
Asp700I GAANNNNTTC 1 cut(s) 957
Asp718I GGTACC 1 cut(s) 1387
AspLEI GCGC 2 cut(s) 96, 1014
AspS9I GGNCC 3 cut(s) 350, 378, 1376
AsuC2I CCSGG 2 cut(s) 299, 1385
AsuHPI GGTGA 4 cut(s) 1045, 1310, 1315, 1357
AvaII GGWCC 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 304
BaeI ACNNNNGTAYC 2 cut(s) 587, 620
BalI TGGCCA 1 cut(s) 1289
BanI GGYRCC 2 cut(s) 93, 1387
BbsI GAAGAC 1 cut(s) 1101
BbvCI CCTCAGC 1 cut(s) 1185
BbvI GCAGC 5 cut(s) 54, 287, 823, 847, 1128
BccI CCATC 3 cut(s) 397, 509, 1323
BceAI ACGGC 1 cut(s) 1231
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BciT130I CCWGG 5 cut(s) 123, 199, 651, 1030, 1275
BciVI GTATCC 1 cut(s) 1359
BcnI CCSGG 2 cut(s) 299, 1385
BcoDI GTCTC 3 cut(s) 146, 451, 692
BfaI CTAG 3 cut(s) 929, 942, 1008
BfoI RGCGCY 1 cut(s) 97
BfuAI ACCTGC 1 cut(s) 1333
BfuI GTATCC 1 cut(s) 1359
BglI GCCNNNNNGGC 1 cut(s) 677
BisI GCNGC 5 cut(s) 68, 276, 812, 861, 1142
BlsI GCNGC 5 cut(s) 69, 277, 813, 862, 1143
Bme1390I CCNGG 7 cut(s) 123, 199, 299, 651, 1030, 1275, 1385
Bme18I GGWCC 1 cut(s) 350
BmgBI CACGTC 1 cut(s) 1099
BmgT120I GGNCC 3 cut(s) 350, 378, 1376
BmiI GGNNCC 4 cut(s) 95, 379, 1221, 1389
BmrFI CCNGG 7 cut(s) 123, 199, 299, 651, 1030, 1275, 1385
BmsI GCATC 2 cut(s) 953, 1290
BpiI GAAGAC 1 cut(s) 1101
BplI GAGNNNNNCTC 4 cut(s) 141, 173, 431, 463
Bpu10I CCTNAGC 1 cut(s) 1185
BpuEI CTTGAG 3 cut(s) 143, 635, 1316
BpuMI CCSGG 2 cut(s) 299, 1385
BsaAI YACGTR 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 1304
BsaHI GRCGYC 1 cut(s) 94
BsaI GGTCTC 2 cut(s) 146, 451
BsaJI CCNNGG 3 cut(s) 121, 373, 1029
BsaWI WCCGGW 1 cut(s) 352
Bsc4I CCNNNNNNNGG 4 cut(s) 146, 376, 1384, 1397
Bse1I ACTGG 1 cut(s) 59
Bse3DI GCAATG 1 cut(s) 552
Bse8I GATNNNNATC 1 cut(s) 1304
BseBI CCWGG 5 cut(s) 123, 199, 651, 1030, 1275
BseDI CCNNGG 3 cut(s) 121, 373, 1029
BseGI GGATG 2 cut(s) 1006, 1305
BseJI GATNNNNATC 1 cut(s) 1304
BseLI CCNNNNNNNGG 4 cut(s) 146, 376, 1384, 1397
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 2 cut(s) 462, 1199
BseNI ACTGG 1 cut(s) 59
BseRI GAGGAG 1 cut(s) 1301
BseSI GKGCMC 1 cut(s) 304
BseXI GCAGC 5 cut(s) 54, 287, 823, 847, 1128
BseYI CCCAGC 1 cut(s) 775
BshFI GGCC 5 cut(s) 78, 139, 380, 1289, 1377
BshNI GGYRCC 2 cut(s) 93, 1387
BsiSI CCGG 3 cut(s) 298, 353, 1385
BslFI GGGAC 2 cut(s) 587, 1403
BslI CCNNNNNNNGG 4 cut(s) 146, 376, 1384, 1397
BsmAI GTCTC 3 cut(s) 146, 451, 692
BsmFI GGGAC 2 cut(s) 587, 1403
BsmI GAATGC 3 cut(s) 31, 1158, 1264
BsnI GGCC 5 cut(s) 78, 139, 380, 1289, 1377
Bso31I GGTCTC 2 cut(s) 146, 451
Bsp1286I GDGCHC 1 cut(s) 304
Bsp143I GATC 2 cut(s) 643, 922
BspANI GGCC 5 cut(s) 78, 139, 380, 1289, 1377
BspCNI CTCAG 2 cut(s) 461, 1198
BspLI GGNNCC 4 cut(s) 95, 379, 1221, 1389
BspMI ACCTGC 1 cut(s) 1333
BspT107I GGYRCC 2 cut(s) 93, 1387
BspTNI GGTCTC 2 cut(s) 146, 451
BsrDI GCAATG 1 cut(s) 552
BsrI ACTGG 1 cut(s) 59
BssECI CCNNGG 3 cut(s) 121, 373, 1029
BssMI GATC 2 cut(s) 643, 922
BssNAI GTATAC 1 cut(s) 1064
BssNI GRCGYC 1 cut(s) 94
BssT1I CCWWGG 1 cut(s) 373
Bst1107I GTATAC 1 cut(s) 1064
Bst2UI CCWGG 5 cut(s) 123, 199, 651, 1030, 1275
Bst4CI ACNGT 4 cut(s) 210, 1068, 1169, 1371
Bst6I CTCTTC 2 cut(s) 518, 728
BstACI GRCGYC 1 cut(s) 94
BstBAI YACGTR 1 cut(s) 996
BstC8I GCNNGC 2 cut(s) 1262, 1287
BstDEI CTNAG 5 cut(s) 73, 448, 815, 1049, 1185
BstENI CCTNNNNNAGG 1 cut(s) 144
BstF5I GGATG 2 cut(s) 1006, 1305
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 2 cut(s) 96, 1014
BstKTI GATC 2 cut(s) 646, 925
BstMAI GTCTC 3 cut(s) 146, 451, 692
BstMBI GATC 2 cut(s) 643, 922
BstMWI GCNNNNNNNGC 4 cut(s) 677, 808, 1291, 1300
BstNI CCWGG 5 cut(s) 123, 199, 651, 1030, 1275
BstNSI RCATGY 2 cut(s) 236, 1018
BstSCI CCNGG 7 cut(s) 121, 197, 297, 649, 1028, 1273, 1383
BstSLI GKGCMC 1 cut(s) 304
BstV1I GCAGC 5 cut(s) 54, 287, 823, 847, 1128
BstV2I GAAGAC 1 cut(s) 1101
BstZ17I GTATAC 1 cut(s) 1064
BsuI GTATCC 1 cut(s) 1359
BsuRI GGCC 5 cut(s) 78, 139, 380, 1289, 1377
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 2 cut(s) 1006, 1305
BtsI GCAGTG 4 cut(s) 873, 1095, 1285, 1326
BtsIMutI CAGTG 5 cut(s) 873, 1095, 1165, 1285, 1326
BveI ACCTGC 1 cut(s) 1333
Cac8I GCNNGC 2 cut(s) 1262, 1287
CfoI GCGC 2 cut(s) 96, 1014
Cfr13I GGNCC 3 cut(s) 350, 378, 1376
CseI GACGC 1 cut(s) 238
Csp6I GTAC 1 cut(s) 1388
CviAII CATG 6 cut(s) 233, 634, 673, 911, 1015, 1243
CviQI GTAC 1 cut(s) 1388
DdeI CTNAG 5 cut(s) 73, 448, 815, 1049, 1185
DinI GGCGCC 1 cut(s) 95
DpnI GATC 2 cut(s) 645, 924
DpnII GATC 2 cut(s) 643, 922
EaeI YGGCCR 1 cut(s) 1287
Eam1104I CTCTTC 2 cut(s) 518, 728
EarI CTCTTC 2 cut(s) 518, 728
Eco130I CCWWGG 1 cut(s) 373
Eco147I AGGCCT 1 cut(s) 78
Eco31I GGTCTC 2 cut(s) 146, 451
Eco47I GGWCC 1 cut(s) 350
EcoNI CCTNNNNNAGG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 378
EcoRI GAATTC 1 cut(s) 957
EcoRII CCWGG 5 cut(s) 121, 197, 649, 1028, 1273
EcoT14I CCWWGG 1 cut(s) 373
EgeI GGCGCC 1 cut(s) 95
EheI GGCGCC 1 cut(s) 95
ErhI CCWWGG 1 cut(s) 373
FaeI CATG 6 cut(s) 236, 637, 676, 914, 1018, 1246
FaqI GGGAC 2 cut(s) 587, 1403
FatI CATG 6 cut(s) 232, 633, 672, 910, 1014, 1242
FblI GTMKAC 1 cut(s) 1063
Fnu4HI GCNGC 5 cut(s) 68, 276, 812, 861, 1142
FokI GGATG 2 cut(s) 1013, 1292
Fsp4HI GCNGC 5 cut(s) 68, 276, 812, 861, 1142
FspBI CTAG 3 cut(s) 929, 942, 1008
GlaI GCGC 2 cut(s) 95, 1013
GluI GCNGC 5 cut(s) 68, 276, 812, 861, 1142
GsaI CCCAGC 1 cut(s) 779
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 5 cut(s) 78, 139, 380, 1289, 1377
HapII CCGG 3 cut(s) 298, 353, 1385
HgaI GACGC 1 cut(s) 238
HhaI GCGC 2 cut(s) 96, 1014
Hin1I GRCGYC 1 cut(s) 94
Hin1II CATG 6 cut(s) 236, 637, 676, 914, 1018, 1246
Hin6I GCGC 2 cut(s) 94, 1012
HinP1I GCGC 2 cut(s) 94, 1012
HindIII AAGCTT 4 cut(s) 161, 686, 800, 1292
HinfI GANTC 6 cut(s) 55, 440, 736, 821, 982, 1036
HpaII CCGG 3 cut(s) 298, 353, 1385
HphI GGTGA 4 cut(s) 1045, 1310, 1315, 1357
Hpy166II GTNNAC 1 cut(s) 1064
Hpy188I TCNGA 6 cut(s) 37, 54, 451, 563, 1082, 1154
Hpy188III TCNNGA 4 cut(s) 641, 866, 1040, 1209
Hpy8I GTNNAC 1 cut(s) 1064
HpyAV CCTTC 9 cut(s) 568, 581, 670, 723, 947, 1081, 1129, 1215, 1426
HpyCH4III ACNGT 4 cut(s) 210, 1068, 1169, 1371
HpyCH4IV ACGT 2 cut(s) 995, 1098
HpyCH4V TGCA 7 cut(s) 4, 31, 431, 514, 811, 878, 1264
HpyF10VI GCNNNNNNNGC 4 cut(s) 677, 808, 1291, 1300
HpyF3I CTNAG 5 cut(s) 73, 448, 815, 1049, 1185
HpySE526I ACGT 2 cut(s) 995, 1098
Hsp92I GRCGYC 1 cut(s) 94
Hsp92II CATG 6 cut(s) 236, 637, 676, 914, 1018, 1246
HspAI GCGC 2 cut(s) 94, 1012
KasI GGCGCC 1 cut(s) 93
KpnI GGTACC 1 cut(s) 1391
Kzo9I GATC 2 cut(s) 643, 922
LmnI GCTCC 1 cut(s) 779
Lsp1109I GCAGC 5 cut(s) 54, 287, 823, 847, 1128
LweI GCATC 2 cut(s) 953, 1290
MaeI CTAG 3 cut(s) 929, 942, 1008
MaeII ACGT 2 cut(s) 995, 1098
MaeIII GTNAC 2 cut(s) 937, 1345
MalI GATC 2 cut(s) 645, 924
MboI GATC 2 cut(s) 643, 922
MhlI GDGCHC 1 cut(s) 304
MlsI TGGCCA 1 cut(s) 1289
MluCI AATT 9 cut(s) 181, 462, 591, 628, 719, 805, 828, 957, 968
MluNI TGGCCA 1 cut(s) 1289
Mly113I GGCGCC 1 cut(s) 94
MlyI GAGTC 2 cut(s) 449, 745
MmeI TCCRAC 1 cut(s) 1112
Mox20I TGGCCA 1 cut(s) 1289
MroXI GAANNNNTTC 1 cut(s) 957
MscI TGGCCA 1 cut(s) 1289
MseI TTAA 6 cut(s) 225, 594, 804, 900, 1022, 1441
MslI CAYNNNNRTG 3 cut(s) 1167, 1170, 1241
Msp20I TGGCCA 1 cut(s) 1289
MspI CCGG 3 cut(s) 298, 353, 1385
MspR9I CCNGG 7 cut(s) 123, 199, 299, 651, 1030, 1275, 1385
Mva1269I GAATGC 3 cut(s) 31, 1158, 1264
MvaI CCWGG 5 cut(s) 123, 199, 651, 1030, 1275
MwoI GCNNNNNNNGC 4 cut(s) 677, 808, 1291, 1300
NarI GGCGCC 1 cut(s) 94
NciI CCSGG 2 cut(s) 299, 1385
NdeII GATC 2 cut(s) 643, 922
NlaIII CATG 6 cut(s) 236, 637, 676, 914, 1018, 1246
NlaIV GGNNCC 4 cut(s) 95, 379, 1221, 1389
NmuCI GTSAC 1 cut(s) 1345
NspI RCATGY 2 cut(s) 236, 1018
PaqCI CACCTGC 1 cut(s) 1333
PceI AGGCCT 1 cut(s) 78
PcsI WCGNNNNNNNCGW 1 cut(s) 1104
PctI GAATGC 3 cut(s) 31, 1158, 1264
PdmI GAANNNNTTC 1 cut(s) 957
PfeI GAWTC 4 cut(s) 55, 821, 982, 1036
PkrI GCNGC 5 cut(s) 69, 277, 813, 862, 1143
PleI GAGTC 2 cut(s) 448, 744
PluTI GGCGCC 1 cut(s) 97
PpsI GAGTC 2 cut(s) 448, 744
Ppu21I YACGTR 1 cut(s) 996
Psp6I CCWGG 5 cut(s) 121, 197, 649, 1028, 1273
PspFI CCCAGC 1 cut(s) 775
PspGI CCWGG 5 cut(s) 121, 197, 649, 1028, 1273
PspN4I GGNNCC 4 cut(s) 95, 379, 1221, 1389
PspPI GGNCC 3 cut(s) 350, 378, 1376
RsaI GTAC 1 cut(s) 1389
RsaNI GTAC 1 cut(s) 1388
RseI CAYNNNNRTG 3 cut(s) 1167, 1170, 1241
SaqAI TTAA 6 cut(s) 225, 594, 804, 900, 1022, 1441
SatI GCNGC 5 cut(s) 68, 276, 812, 861, 1142
Sau3AI GATC 2 cut(s) 643, 922
Sau96I GGNCC 3 cut(s) 350, 378, 1376
SchI GAGTC 2 cut(s) 449, 745
ScrFI CCNGG 7 cut(s) 123, 199, 299, 651, 1030, 1275, 1385
SduI GDGCHC 1 cut(s) 304
SfaNI GCATC 2 cut(s) 953, 1290
SfoI GGCGCC 1 cut(s) 95
SinI GGWCC 1 cut(s) 350
SmiMI CAYNNNNRTG 3 cut(s) 1167, 1170, 1241
SmlI CTYRAG 3 cut(s) 158, 614, 1295
SmoI CTYRAG 3 cut(s) 158, 614, 1295
Sse9I AATT 9 cut(s) 181, 462, 591, 628, 719, 805, 828, 957, 968
SseBI AGGCCT 1 cut(s) 78
SspDI GGCGCC 1 cut(s) 93
SspI AATATT 2 cut(s) 220, 363
SspMI CTAG 3 cut(s) 929, 942, 1008
StuI AGGCCT 1 cut(s) 78
StyD4I CCNGG 7 cut(s) 121, 197, 297, 649, 1028, 1273, 1383
StyI CCWWGG 1 cut(s) 373
TaaI ACNGT 4 cut(s) 210, 1068, 1169, 1371
TaiI ACGT 2 cut(s) 998, 1101
TaqI TCGA 2 cut(s) 961, 1107
TaqII GACCGA 1 cut(s) 433
TasI AATT 9 cut(s) 181, 462, 591, 628, 719, 805, 828, 957, 968
TfiI GAWTC 4 cut(s) 55, 821, 982, 1036
Tru1I TTAA 6 cut(s) 225, 594, 804, 900, 1022, 1441
Tru9I TTAA 6 cut(s) 225, 594, 804, 900, 1022, 1441
TscAI CASTG 5 cut(s) 880, 1095, 1172, 1285, 1333
TseFI GTSAC 1 cut(s) 1345
TseI GCWGC 5 cut(s) 67, 275, 811, 860, 1141
Tsp45I GTSAC 1 cut(s) 1345
TspDTI ATGAA 4 cut(s) 536, 689, 1151, 1231
TspRI CASTG 5 cut(s) 880, 1095, 1172, 1285, 1333
VpaK11BI GGWCC 1 cut(s) 350
XagI CCTNNNNNAGG 1 cut(s) 144
XapI RAATTY 2 cut(s) 181, 957
XceI RCATGY 2 cut(s) 236, 1018
XmiI GTMKAC 1 cut(s) 1063
XmnI GAANNNNTTC 1 cut(s) 957
XspI CTAG 3 cut(s) 929, 942, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.