Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015027

Physical Location & Seq

Genomic Coordinates Reverse (-)

12936968 .. 12938834

Gene Structure 1867 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G30360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGCCAGAGATCGAGATTGCCGCCGGCAGCGGCGACAACAACGACGCCTTATTCGGTAAATATGAGCTCGGAAAGCTTCTCGGATGCGGCGCATTCGCCAAAGTCTTCCACGCACGTGATCGTCGTACCGGCCAAAGCGTCGCCGTGAAAATCCTCAACAAGAAAAAACTCCTCACAAATCCAGCTCTAGCCAACAACATCAAACGCGAGATCTCAATCATGAGAAGATTATCTCATCCAAACATCGTCAAGCTCCACGAAGTAATGGCGACAAAATCAAAGATCTTCTTCGCAATGGAGTTTGTTAAAGGAGGAGAACTATTCAACAAAATCTCAAAACATGGACGTCTTAGCGAAGATTTAAGCCGGAGATATTTCCAGCAACTGATCTCCGCCGTTGGTTATTGCCACGCTCGCGGTGTTTACCACCGCGATCTCAAACCAGAGAATCTATTAATAGACGAAAACGGAAACTTAAAAGTTTCCGATTTCGGTCTAAGCGCGTTAACGGATCAGATCCGACCCGATGGGTTGTTACATACCTTGTGTGGTACTCCGGCGTACGTTGCGCCGGAGATTCTATCTAAAAAAGGATATGAAGGTGCTAAAGTTGATGTATGGTCTTGTGGAATCGTCTTGTTCGTTCTCGTCGCCGGTTATTTACCGTTTAACGATCCGAATGTGATGAATATGTATAAGAAGATTTATAAAGGAGAGTATCGTTTTCCTCGTTGGATGTCTCCAGATCTGAAACGATTCGTTTCTCGTCTTTTAGATATTAATCCTGAGACTAGAATCACCATTGATGAGATTTTGAAAGATCCTTGGTTTGTTAGAGGAGGTTTTAAACAGATCAAGTTCCACGATGACGAGATCGAAGATCAGAAAGTGGAATCGTCACTAGAAGCTGTGAAGAGTTTAAACGCGTTTGATTTGATTTCTTACTCGTCGGGATTGGATTTGTCGGGATTGTTTGCTGGTTGTAGTAATTCGAGTGGTGAATCGGAGAGGTTTTTATCGGAAAAGTCGCCGGAGATGTTGGCGGAGGAAGTGGAGGGGTTTGCGAGAGAGGAGAATCTGAGGATGAAGAAGAAGAAGGAGGAAGAGTATGGGTTTGAGATGGAGGGGCAAAATGGGAAATTTGGTATCGGGATTTGTATTTCGCGGTTGAATGATTTGCTTGTGGTGGTGGAGGCACGGCGGAGAGGTGGTGATGGTGATTGTTATAAGGAGATGTGGAATGGTAAACTCAGGGTTCAACTTATTCGCGTTTGCGATCAGACGTCGTCAACAAACGCGGCTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009268 GO:0009628 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04113 ko04138 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04113 map04138 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

435

Amino Acids

49.02

Weight (kDa)

8.44

Isoelectric Point (pI)

40.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	21 - 277	4.2e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	22 - 273	4.9e-39	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	107 - 231	2.8e-06	Kinase-like
NAF	PF03822	305 - 364	4.7e-17	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30360
fragaria_vesca	FvH4_3g40260
malus_domestica	MD03G1054700.v1.1 MD11G1056100.v1.1
prunus_persica	Prupe.6G043300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0072521
rosa_laevigata	RLG00000036309
rosa_multiflora	Rmu_co8287111.1_g000001 Rmu_co8453861.1_g000001 Rmu_sc0007873.1_g000002
rosa_roxburghii	Rroxscaffold_1G00008620
rosa_rugosa	Rorug05G0418900
rosa_samantha	Rh5AG475200 Rh5BG495500 Rh5CG519300
rosa_wichuraiana	Rw5G044150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	708, 1227
AatII	GACGTC	2 cut(s)	349, 1286
AccII	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
AclWI	GGATC	4 cut(s)	511, 519, 668, 815
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	1 cut(s)	1139
AcvI	CACGTG	1 cut(s)	116
AcyI	GRCGYC	3 cut(s)	45, 346, 1283
AfaI	GTAC	3 cut(s)	127, 553, 563
AflIII	ACRYGT	1 cut(s)	924
AgsI	TTSAA	4 cut(s)	325, 817, 1171, 1259
AleI	CACNNNNGTG	1 cut(s)	114
AluBI	AGCT	5 cut(s)	67, 76, 185, 253, 908
AluI	AGCT	5 cut(s)	67, 76, 185, 253, 908
Alw21I	GWGCWC	1 cut(s)	69
Alw26I	GTCTC	2 cut(s)	744, 782
AlwI	GGATC	4 cut(s)	511, 519, 668, 815
AlwNI	CAGNNNCTG	1 cut(s)	385
AoxI	GGCC	1 cut(s)	130
ApeKI	GCWGC	1 cut(s)	27
ApoI	RAATTY	1 cut(s)	1139
ArsI	GACNNNNNNTTYG	2 cut(s)	35, 67
AseI	ATTAAT	2 cut(s)	455, 780
Asp700I	GAANNNNTTC	1 cut(s)	755
AspLEI	GCGC	3 cut(s)	92, 503, 571
AsuHPI	GGTGA	4 cut(s)	790, 1010, 1223, 1229
BanII	GRGCYC	1 cut(s)	69
BbrPI	CACGTG	1 cut(s)	116
BbsI	GAAGAC	1 cut(s)	97
Bbv12I	GWGCWC	1 cut(s)	69
BbvI	GCAGC	1 cut(s)	39
BccI	CCATC	3 cut(s)	521, 1114, 1208
BceAI	ACGGC	3 cut(s)	128, 380, 1214
BcoDI	GTCTC	2 cut(s)	744, 782
BfaI	CTAG	3 cut(s)	188, 792, 902
BglII	AGATCT	3 cut(s)	210, 282, 745
BisI	GCNGC	5 cut(s)	21, 28, 31, 88, 1299
BlsI	GCNGC	5 cut(s)	22, 29, 32, 89, 1300
BmsI	GCATC	1 cut(s)	74
BpiI	GAAGAC	1 cut(s)	97
BpmI	CTGGAG	1 cut(s)	726
BsaAI	YACGTR	1 cut(s)	116
BsaBI	GATNNNNATC	2 cut(s)	215, 780
BsaHI	GRCGYC	3 cut(s)	45, 346, 1283
BsaJI	CCNNGG	1 cut(s)	824
BsaXI	ACNNNNNCTCC	4 cut(s)	1091, 1121, 1195, 1225
Bse118I	RCCGGY	3 cut(s)	23, 128, 653
Bse3DI	GCAATG	1 cut(s)	300
Bse8I	GATNNNNATC	2 cut(s)	215, 780
BseDI	CCNNGG	1 cut(s)	824
BseGI	GGATG	4 cut(s)	89, 235, 741, 1089
BseJI	GATNNNNATC	2 cut(s)	215, 780
BseMI	GCAATG	1 cut(s)	300
BseMII	CTCAG	3 cut(s)	777, 1070, 1264
BseRI	GAGGAG	4 cut(s)	161, 327, 852, 1085
BseXI	GCAGC	1 cut(s)	39
Bsh1236I	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
BshFI	GGCC	1 cut(s)	132
BsiHKAI	GWGCWC	1 cut(s)	69
BsiSI	CCGG	7 cut(s)	24, 129, 367, 557, 572, 654, 1031
BsiWI	CGTACG	1 cut(s)	561
BsmAI	GTCTC	2 cut(s)	744, 782
BsmI	GAATGC	1 cut(s)	92
BsnI	GGCC	1 cut(s)	132
Bsp1286I	GDGCHC	1 cut(s)	69
BspANI	GGCC	1 cut(s)	132
BspCNI	CTCAG	3 cut(s)	778, 1071, 1263
BspFNI	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
BspHI	TCATGA	1 cut(s)	219
BspPI	GGATC	4 cut(s)	511, 519, 668, 815
BsrDI	GCAATG	1 cut(s)	300
BsrFI	RCCGGY	3 cut(s)	23, 128, 653
BssAI	RCCGGY	3 cut(s)	23, 128, 653
BssECI	CCNNGG	1 cut(s)	824
BssNI	GRCGYC	3 cut(s)	45, 346, 1283
BssT1I	CCWWGG	1 cut(s)	824
Bst4CI	ACNGT	1 cut(s)	666
Bst6I	CTCTTC	2 cut(s)	908, 1098
BstACI	GRCGYC	3 cut(s)	45, 346, 1283
BstBAI	YACGTR	1 cut(s)	116
BstC8I	GCNNGC	2 cut(s)	25, 415
BstDEI	CTNAG	5 cut(s)	350, 497, 786, 1079, 1250
BstF5I	GGATG	4 cut(s)	89, 235, 741, 1089
BstFNI	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
BstHHI	GCGC	3 cut(s)	92, 503, 571
BstMAI	GTCTC	2 cut(s)	744, 782
BstMWI	GCNNNNNNNGC	3 cut(s)	73, 414, 566
BstUI	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
BstV1I	GCAGC	1 cut(s)	39
BstV2I	GAAGAC	1 cut(s)	97
BstX2I	RGATCY	5 cut(s)	210, 282, 516, 745, 820
BstYI	RGATCY	5 cut(s)	210, 282, 516, 745, 820
BsuRI	GGCC	1 cut(s)	132
BtsCI	GGATG	4 cut(s)	89, 235, 741, 1089
Cac8I	GCNNGC	2 cut(s)	25, 415
CaiI	CAGNNNCTG	1 cut(s)	385
CciI	TCATGA	1 cut(s)	219
CfoI	GCGC	3 cut(s)	92, 503, 571
Cfr10I	RCCGGY	3 cut(s)	23, 128, 653
CseI	GACGC	2 cut(s)	53, 127
Csp6I	GTAC	3 cut(s)	126, 552, 562
CviAII	CATG	2 cut(s)	220, 341
CviJI	RGCY	9 cut(s)	67, 76, 132, 185, 191, 253, 366, 908, 1301
CviKI_1	RGCY	9 cut(s)	67, 76, 132, 185, 191, 253, 366, 908, 1301
CviQI	GTAC	3 cut(s)	126, 552, 562
DdeI	CTNAG	5 cut(s)	350, 497, 786, 1079, 1250
DraI	TTTAAA	2 cut(s)	847, 921
EaeI	YGGCCR	1 cut(s)	130
Eam1104I	CTCTTC	2 cut(s)	908, 1098
EarI	CTCTTC	2 cut(s)	908, 1098
EciI	GGCGGA	3 cut(s)	382, 1058, 1216
Ecl136II	GAGCTC	1 cut(s)	67
Eco130I	CCWWGG	1 cut(s)	824
Eco24I	GRGCYC	1 cut(s)	69
Eco53kI	GAGCTC	1 cut(s)	67
Eco72I	CACGTG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	67
EcoT14I	CCWWGG	1 cut(s)	824
EcoT38I	GRGCYC	1 cut(s)	69
ErhI	CCWWGG	1 cut(s)	824
FaeI	CATG	2 cut(s)	223, 344
FalI	AAGNNNNNCTT	2 cut(s)	272, 304
FatI	CATG	2 cut(s)	219, 340
Fnu4HI	GCNGC	5 cut(s)	21, 28, 31, 88, 1299
FokI	GGATG	4 cut(s)	96, 222, 748, 1096
FriOI	GRGCYC	1 cut(s)	69
Fsp4HI	GCNGC	5 cut(s)	21, 28, 31, 88, 1299
FspBI	CTAG	3 cut(s)	188, 792, 902
GlaI	GCGC	3 cut(s)	91, 502, 570
GluI	GCNGC	5 cut(s)	21, 28, 31, 88, 1299
GsuI	CTGGAG	1 cut(s)	726
HaeIII	GGCC	1 cut(s)	132
HapII	CCGG	7 cut(s)	24, 129, 367, 557, 572, 654, 1031
HgaI	GACGC	2 cut(s)	53, 127
HhaI	GCGC	3 cut(s)	92, 503, 571
Hin1I	GRCGYC	3 cut(s)	45, 346, 1283
Hin1II	CATG	2 cut(s)	223, 344
Hin6I	GCGC	3 cut(s)	90, 501, 569
HinP1I	GCGC	3 cut(s)	90, 501, 569
HincII	GTYRAC	2 cut(s)	507, 1290
HindII	GTYRAC	2 cut(s)	507, 1290
HindIII	AAGCTT	1 cut(s)	74
HinfI	GANTC	8 cut(s)	448, 577, 630, 756, 795, 893, 1001, 1075
HpaI	GTTAAC	1 cut(s)	507
HpaII	CCGG	7 cut(s)	24, 129, 367, 557, 572, 654, 1031
HphI	GGTGA	4 cut(s)	790, 1010, 1223, 1229
Hpy166II	GTNNAC	4 cut(s)	424, 507, 1247, 1290
Hpy188III	TCNNGA	7 cut(s)	13, 220, 743, 785, 951, 966, 1150
Hpy8I	GTNNAC	4 cut(s)	424, 507, 1247, 1290
Hpy99I	CGWCG	6 cut(s)	47, 126, 143, 653, 952, 1288
HpyAV	CCTTC	2 cut(s)	593, 1090
HpyCH4III	ACNGT	1 cut(s)	666
HpyCH4IV	ACGT	4 cut(s)	115, 346, 564, 1283
HpyF10VI	GCNNNNNNNGC	3 cut(s)	73, 414, 566
HpyF3I	CTNAG	5 cut(s)	350, 497, 786, 1079, 1250
HpySE526I	ACGT	4 cut(s)	115, 346, 564, 1283
Hsp92I	GRCGYC	3 cut(s)	45, 346, 1283
Hsp92II	CATG	2 cut(s)	223, 344
HspAI	GCGC	3 cut(s)	90, 501, 569
KroI	GCCGGC	1 cut(s)	23
KroNI	GCCGGC	1 cut(s)	25
KspAI	GTTAAC	1 cut(s)	507
LmnI	GCTCC	1 cut(s)	258
Lsp1109I	GCAGC	1 cut(s)	39
LweI	GCATC	1 cut(s)	74
MaeI	CTAG	3 cut(s)	188, 792, 902
MaeII	ACGT	4 cut(s)	115, 346, 564, 1283
MaeIII	GTNAC	2 cut(s)	534, 897
MflI	RGATCY	5 cut(s)	210, 282, 516, 745, 820
MhlI	GDGCHC	1 cut(s)	69
MluCI	AATT	2 cut(s)	988, 1139
MluI	ACGCGT	1 cut(s)	924
MmeI	TCCRAC	2 cut(s)	544, 713
MroNI	GCCGGC	1 cut(s)	23
MroXI	GAANNNNTTC	1 cut(s)	755
MslI	CAYNNNNRTG	1 cut(s)	114
MspA1I	CMGCKG	1 cut(s)	30
MspI	CCGG	7 cut(s)	24, 129, 367, 557, 572, 654, 1031
MssI	GTTTAAAC	1 cut(s)	921
Mva1269I	GAATGC	1 cut(s)	92
MvnI	CGCG	8 cut(s)	207, 417, 432, 503, 926, 1165, 1269, 1298
MwoI	GCNNNNNNNGC	3 cut(s)	73, 414, 566
NaeI	GCCGGC	1 cut(s)	25
NgoMIV	GCCGGC	1 cut(s)	23
NlaIII	CATG	2 cut(s)	223, 344
NmuCI	GTSAC	1 cut(s)	897
OliI	CACNNNNGTG	1 cut(s)	114
PagI	TCATGA	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	3 cut(s)	121, 639, 727
PctI	GAATGC	1 cut(s)	92
PdiI	GCCGGC	1 cut(s)	25
PdmI	GAANNNNTTC	1 cut(s)	755
PfeI	GAWTC	8 cut(s)	448, 577, 630, 756, 795, 893, 1001, 1075
Pfl23II	CGTACG	1 cut(s)	561
PflFI	GACNNNGTC	1 cut(s)	1285
PkrI	GCNGC	5 cut(s)	22, 29, 32, 89, 1300
PmaCI	CACGTG	1 cut(s)	116
PmeI	GTTTAAAC	1 cut(s)	921
PmlI	CACGTG	1 cut(s)	116
Ppu21I	YACGTR	1 cut(s)	116
PshBI	ATTAAT	2 cut(s)	455, 780
PsiI	TTATAA	2 cut(s)	708, 1227
Psp124BI	GAGCTC	1 cut(s)	69
PspCI	CACGTG	1 cut(s)	116
PspLI	CGTACG	1 cut(s)	561
PstNI	CAGNNNCTG	1 cut(s)	385
PsuI	RGATCY	5 cut(s)	210, 282, 516, 745, 820
PsyI	GACNNNGTC	1 cut(s)	1285
RsaI	GTAC	3 cut(s)	127, 553, 563
RsaNI	GTAC	3 cut(s)	126, 552, 562
RseI	CAYNNNNRTG	1 cut(s)	114
SacI	GAGCTC	1 cut(s)	69
SatI	GCNGC	5 cut(s)	21, 28, 31, 88, 1299
SduI	GDGCHC	1 cut(s)	69
SfaNI	GCATC	1 cut(s)	74
SmiMI	CAYNNNNRTG	1 cut(s)	114
Sse9I	AATT	2 cut(s)	988, 1139
SspMI	CTAG	3 cut(s)	188, 792, 902
SstI	GAGCTC	1 cut(s)	69
StyI	CCWWGG	1 cut(s)	824
TaaI	ACNGT	1 cut(s)	666
TaiI	ACGT	4 cut(s)	118, 349, 567, 1286
TaqI	TCGA	3 cut(s)	12, 876, 992
TaqII	GACCGA	1 cut(s)	482
TasI	AATT	2 cut(s)	988, 1139
TauI	GCSGC	4 cut(s)	23, 33, 90, 1301
TfiI	GAWTC	8 cut(s)	448, 577, 630, 756, 795, 893, 1001, 1075
TseFI	GTSAC	1 cut(s)	897
TseI	GCWGC	1 cut(s)	27
Tsp45I	GTSAC	1 cut(s)	897
TspDTI	ATGAA	3 cut(s)	612, 701, 1100
TspGWI	ACGGA	2 cut(s)	483, 524
Tth111I	GACNNNGTC	1 cut(s)	1285
VspI	ATTAAT	2 cut(s)	455, 780
XapI	RAATTY	1 cut(s)	1139
XmnI	GAANNNNTTC	1 cut(s)	755
XspI	CTAG	3 cut(s)	188, 792, 902
ZraI	GACGTC	2 cut(s)	347, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.