AT2G33260

Tryptophan/tyrosine permease family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0019590
Physical Location & Seq
Reverse (-)
14100735 .. 14102671
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33260.2

Sequence Viewer

Length: 1311 bp
ATGGATGATTTGGAGATTACCCACGAAACGAAGAAGGGAAAGAGTTTTTGGGCTGCCGTTAGTTTGATCATCGGAACAGCCGTTGGTCCAGGAATGCTCGGCCTCCCAGCTGCAACTATCAGATCTGGTTCTATCCCATCGACCATTGCTTTACTTTGTTCTTGGGTTTACGTCATTTCCTCTATTCTTCTCGTGGCTGAGCTCAGCTTTGCAGCAATGGAAGAAGACAATGCAGCAGAGGTTAGTTTCACAGGACTTGCAACTAAATCCTTTGGGAACAAATTTGGAGTTTTCGTGGCTTTTGTGTATGCTTCACTAAGTTTCTCTTTGATGGTTGCTTGTGTCTCGGGTATTGGCTCCATTGTGTCTCAATGGTTTCCTTCAATGAATCCATTTTTGGCCAATGCTATATTCCCTCTAGTTTCCGGAATCTTGATCGGGTTTTTCCCTTTCAATGCCATTGATTTCACCAACAGGGGTCTCTGCTTCCTCATGCTCTTCTCTATAACTTCACTTGTGGCCATTGGTTTATCTGTGGCTAGGTCCAATGTGTTAGCCTCATTTGGTCAATCATGTTGGAAAGTCTCCATGGTTTTACCCGCGGTTCCTGTTATGGTACTGACACTAGGGTTTCATGTGATCACGCCTTTCATATGCAATCTCGCTGGGGATTCGGTTTCAGATGCTCGGAGAGCCATTCTTGTAGGCGGTGTTGTGCCATTGGCTATGGTGTTGTCTTGGAATCTAATTGTTTTGGGGCTTGCAAGAATCACTGTGCCTGCTGCACCTTCTTCAACCATTGACCCAATCTCTCTTCTTCTATCTGTGAATCCTTCTGCCTTATCTGCTGTTCAAGGCTTTGCTTTCTCAGCCTTAGCTACCAGTTTAATCGGATATGCTGTTAGCTTCCCGAAACAGCTCCTCGACACATGGAAGCTTGTGTCTAAGCAATCAAATGGAAATGGAAGACTTGGGTCTGTAAGTTTCTCATCAAAAGAGCGTGATAGGAGAACTAATGGGAGAGCCTCATACAATGAACCAGCAAGAGCTCGTGATGGGTTTGAAGCAGTAGTGATGCTATTTGTCCTTGGAGTTCCAGCTCTAATTGCAACATTCTTTCCCTCAACGTTCTCGAGAGCTCTGGATTTTGCCGGTGTTTATGCAAACTGTTTCCTCTTTGGTGTCCTGCCTCCTGCAATGGCTTATATTCAACAGTCCAGAAAGAAGCTCAGGCCATGGGTTCTTCCCGGAGGCAACTTTACCTTGTTGATCTTATTTGCAATCGCCATTATTCTGGGAATATGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Trp_Tyr_perm

Protein Analysis

436

Amino Acids

46.41

Weight (kDa)

9.3

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Trp_Tyr_perm PF03222 116 - 540 1.4e-108 Tryptophan/tyrosine permease family
Aa_trans PF01490 117 - 324 5.1e-08 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33260 AT2G33260
fragaria_vesca FvH4_2g12801
malus_domestica MD14G1001300.v1.1
prunus_persica Prupe.7G001500_v2.0.a1
pyrus_communis pycom12g00130 pycom49g00080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 602
AccIII TCCGGA 1 cut(s) 425
AciI CCGC 3 cut(s) 600, 602, 708
AclI AACGTT 1 cut(s) 1127
AcoI YGGCCR 2 cut(s) 399, 519
AcsI RAATTY 1 cut(s) 281
AfaI GTAC 1 cut(s) 618
AgsI TTSAA 6 cut(s) 384, 454, 795, 854, 1064, 1211
AjnI CCWGG 1 cut(s) 88
AjuI GAANNNNNNNTTGG 6 cut(s) 31, 63, 380, 395, 412, 427
Alw21I GWGCWC 3 cut(s) 204, 1051, 1141
Alw26I GTCTC 4 cut(s) 349, 372, 485, 589
Ama87I CYCGRG 2 cut(s) 346, 1132
Aor13HI TCCGGA 1 cut(s) 425
AoxI GGCC 4 cut(s) 100, 399, 519, 1232
ApeKI GCWGC 5 cut(s) 53, 110, 212, 233, 782
ApoI RAATTY 1 cut(s) 281
AspS9I GGNCC 2 cut(s) 86, 543
AsuC2I CCSGG 1 cut(s) 1248
AsuHPI GGTGA 1 cut(s) 460
AvaI CYCGRG 2 cut(s) 346, 1132
AvaII GGWCC 2 cut(s) 86, 543
BalI TGGCCA 2 cut(s) 401, 521
BanII GRGCYC 3 cut(s) 204, 1051, 1141
BauI CACGAG 2 cut(s) 191, 1050
BbsI GAAGAC 2 cut(s) 231, 973
Bbv12I GWGCWC 3 cut(s) 204, 1051, 1141
BbvI GCAGC 5 cut(s) 40, 97, 224, 245, 769
BccI CCATC 3 cut(s) 145, 325, 1049
BceAI ACGGC 2 cut(s) 41, 65
BciT130I CCWGG 1 cut(s) 90
BclI TGATCA 2 cut(s) 66, 639
BcnI CCSGG 1 cut(s) 1248
BcoDI GTCTC 4 cut(s) 349, 372, 485, 589
BfaI CTAG 3 cut(s) 419, 540, 626
BglII AGATCT 1 cut(s) 122
BisI GCNGC 5 cut(s) 54, 111, 213, 234, 783
BlpI GCTNAGC 2 cut(s) 198, 203
BlsI GCNGC 5 cut(s) 55, 112, 214, 235, 784
Bme1390I CCNGG 2 cut(s) 90, 1248
Bme18I GGWCC 2 cut(s) 86, 543
BmeT110I CYCGRG 2 cut(s) 346, 1132
BmgT120I GGNCC 2 cut(s) 86, 543
BmiI GGNNCC 2 cut(s) 358, 606
BmrFI CCNGG 2 cut(s) 90, 1248
BmsI GCATC 2 cut(s) 673, 1065
BoxI GACNNNNGTC 1 cut(s) 973
BpiI GAAGAC 2 cut(s) 231, 973
Bpu10I CCTNAGC 2 cut(s) 874, 1229
Bpu1102I GCTNAGC 2 cut(s) 198, 203
BpuMI CCSGG 1 cut(s) 1248
BsaI GGTCTC 1 cut(s) 485
BsaJI CCNNGG 4 cut(s) 588, 600, 1087, 1235
BsaWI WCCGGW 1 cut(s) 425
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bse118I RCCGGY 1 cut(s) 1151
Bse1I ACTGG 1 cut(s) 882
Bse3DI GCAATG 3 cut(s) 144, 222, 1203
BseAI TCCGGA 1 cut(s) 425
BseBI CCWGG 1 cut(s) 90
BseDI CCNNGG 4 cut(s) 588, 600, 1087, 1235
BseGI GGATG 1 cut(s) 10
BseMI GCAATG 3 cut(s) 144, 222, 1203
BseMII CTCAG 4 cut(s) 189, 217, 882, 1243
BseNI ACTGG 1 cut(s) 882
BseRI GAGGAG 1 cut(s) 911
BseXI GCAGC 5 cut(s) 40, 97, 224, 245, 769
BseYI CCCAGC 2 cut(s) 106, 665
BsgI GTGCAG 1 cut(s) 768
Bsh1236I CGCG 1 cut(s) 602
BshFI GGCC 4 cut(s) 102, 401, 521, 1234
BsiHKAI GWGCWC 3 cut(s) 204, 1051, 1141
BsiHKCI CYCGRG 2 cut(s) 346, 1132
BsiSI CCGG 3 cut(s) 426, 1152, 1248
BsmAI GTCTC 4 cut(s) 349, 372, 485, 589
BsmI GAATGC 1 cut(s) 99
BsnI GGCC 4 cut(s) 102, 401, 521, 1234
Bso31I GGTCTC 1 cut(s) 485
BsoBI CYCGRG 2 cut(s) 346, 1132
Bsp1286I GDGCHC 3 cut(s) 204, 1051, 1141
Bsp13I TCCGGA 1 cut(s) 425
Bsp143I GATC 5 cut(s) 66, 122, 435, 639, 1269
Bsp1720I GCTNAGC 2 cut(s) 198, 203
Bsp19I CCATGG 2 cut(s) 588, 1235
BspACI CCGC 3 cut(s) 600, 602, 708
BspANI GGCC 4 cut(s) 102, 401, 521, 1234
BspCNI CTCAG 4 cut(s) 190, 216, 881, 1242
BspEI TCCGGA 1 cut(s) 425
BspFNI CGCG 1 cut(s) 602
BspLI GGNNCC 2 cut(s) 358, 606
BspQI GCTCTTC 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 485
BsrDI GCAATG 3 cut(s) 144, 222, 1203
BsrFI RCCGGY 1 cut(s) 1151
BsrI ACTGG 1 cut(s) 882
BssAI RCCGGY 1 cut(s) 1151
BssECI CCNNGG 4 cut(s) 588, 600, 1087, 1235
BssMI GATC 5 cut(s) 66, 122, 435, 639, 1269
BssSI CACGAG 2 cut(s) 191, 1050
BssT1I CCWWGG 3 cut(s) 588, 1087, 1235
Bst2BI CACGAG 2 cut(s) 191, 1050
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 3 cut(s) 775, 1169, 1215
Bst6I CTCTTC 2 cut(s) 503, 819
BstC8I GCNNGC 2 cut(s) 762, 780
BstDEI CTNAG 7 cut(s) 198, 203, 317, 868, 874, 945, 1229
BstDSI CCRYGG 3 cut(s) 588, 600, 1235
BstF5I GGATG 1 cut(s) 10
BstFNI CGCG 1 cut(s) 602
BstKTI GATC 5 cut(s) 69, 125, 438, 642, 1272
BstMAI GTCTC 4 cut(s) 349, 372, 485, 589
BstMBI GATC 5 cut(s) 66, 122, 435, 639, 1269
BstMWI GCNNNNNNNGC 4 cut(s) 692, 845, 869, 1106
BstNI CCWGG 1 cut(s) 90
BstPAI GACNNNNGTC 1 cut(s) 973
BstSCI CCNGG 2 cut(s) 88, 1246
BstUI CGCG 1 cut(s) 602
BstV1I GCAGC 5 cut(s) 40, 97, 224, 245, 769
BstV2I GAAGAC 2 cut(s) 231, 973
BstX2I RGATCY 1 cut(s) 122
BstXI CCANNNNNNTGG 1 cut(s) 1294
BstYI RGATCY 1 cut(s) 122
BsuRI GGCC 4 cut(s) 102, 401, 521, 1234
BtgI CCRYGG 3 cut(s) 588, 600, 1235
BtsCI GGATG 1 cut(s) 10
BtsIMutI CAGTG 1 cut(s) 771
Cac8I GCNNGC 2 cut(s) 762, 780
Cfr10I RCCGGY 1 cut(s) 1151
Cfr13I GGNCC 2 cut(s) 86, 543
Cfr42I CCGCGG 1 cut(s) 603
Csp6I GTAC 1 cut(s) 617
CviAII CATG 6 cut(s) 493, 573, 589, 635, 930, 1236
CviQI GTAC 1 cut(s) 617
DdeI CTNAG 7 cut(s) 198, 203, 317, 868, 874, 945, 1229
DpnI GATC 5 cut(s) 68, 124, 437, 641, 1271
DpnII GATC 5 cut(s) 66, 122, 435, 639, 1269
EaeI YGGCCR 2 cut(s) 399, 519
Eam1104I CTCTTC 2 cut(s) 503, 819
EarI CTCTTC 2 cut(s) 503, 819
Ecl136II GAGCTC 3 cut(s) 202, 1049, 1139
Eco130I CCWWGG 3 cut(s) 588, 1087, 1235
Eco24I GRGCYC 3 cut(s) 204, 1051, 1141
Eco31I GGTCTC 1 cut(s) 485
Eco47I GGWCC 2 cut(s) 86, 543
Eco53kI GAGCTC 3 cut(s) 202, 1049, 1139
Eco88I CYCGRG 2 cut(s) 346, 1132
EcoICRI GAGCTC 3 cut(s) 202, 1049, 1139
EcoRII CCWGG 1 cut(s) 88
EcoT14I CCWWGG 3 cut(s) 588, 1087, 1235
EcoT38I GRGCYC 3 cut(s) 204, 1051, 1141
ErhI CCWWGG 3 cut(s) 588, 1087, 1235
FaeI CATG 6 cut(s) 496, 576, 592, 638, 933, 1239
FalI AAGNNNNNCTT 2 cut(s) 310, 342
FatI CATG 6 cut(s) 492, 572, 588, 634, 929, 1235
FauI CCCGC 1 cut(s) 607
FauNDI CATATG 1 cut(s) 653
FbaI TGATCA 2 cut(s) 66, 639
Fnu4HI GCNGC 5 cut(s) 54, 111, 213, 234, 783
FokI GGATG 1 cut(s) 17
FriOI GRGCYC 3 cut(s) 204, 1051, 1141
Fsp4HI GCNGC 5 cut(s) 54, 111, 213, 234, 783
FspBI CTAG 3 cut(s) 419, 540, 626
GluI GCNGC 5 cut(s) 54, 111, 213, 234, 783
GsaI CCCAGC 2 cut(s) 110, 669
HaeIII GGCC 4 cut(s) 102, 401, 521, 1234
HapII CCGG 3 cut(s) 426, 1152, 1248
Hin1II CATG 6 cut(s) 496, 576, 592, 638, 933, 1239
HindIII AAGCTT 1 cut(s) 935
HinfI GANTC 6 cut(s) 388, 429, 671, 742, 768, 829
HpaII CCGG 3 cut(s) 426, 1152, 1248
HphI GGTGA 1 cut(s) 460
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 5 cut(s) 74, 122, 682, 690, 893
Hpy188III TCNNGA 8 cut(s) 426, 433, 910, 1052, 1132, 1134, 1142, 1218
Hpy8I GTNNAC 1 cut(s) 169
HpyAV CCTTC 4 cut(s) 28, 390, 798, 843
HpyCH4III ACNGT 3 cut(s) 775, 1169, 1215
HpyCH4IV ACGT 2 cut(s) 171, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 692, 845, 869, 1106
HpyF3I CTNAG 7 cut(s) 198, 203, 317, 868, 874, 945, 1229
HpySE526I ACGT 2 cut(s) 171, 1127
Hsp92II CATG 6 cut(s) 496, 576, 592, 638, 933, 1239
Kpn2I TCCGGA 1 cut(s) 425
Ksp22I TGATCA 2 cut(s) 66, 639
KspI CCGCGG 1 cut(s) 603
Kzo9I GATC 5 cut(s) 66, 122, 435, 639, 1269
LguI GCTCTTC 1 cut(s) 503
LmnI GCTCC 2 cut(s) 362, 924
Lsp1109I GCAGC 5 cut(s) 40, 97, 224, 245, 769
LweI GCATC 2 cut(s) 673, 1065
MaeI CTAG 3 cut(s) 419, 540, 626
MaeII ACGT 2 cut(s) 171, 1127
MalI GATC 5 cut(s) 68, 124, 437, 641, 1271
MboI GATC 5 cut(s) 66, 122, 435, 639, 1269
MflI RGATCY 1 cut(s) 122
MhlI GDGCHC 3 cut(s) 204, 1051, 1141
MlsI TGGCCA 2 cut(s) 401, 521
MluCI AATT 3 cut(s) 281, 747, 1104
MluNI TGGCCA 2 cut(s) 401, 521
MmeI TCCRAC 1 cut(s) 557
Mox20I TGGCCA 2 cut(s) 401, 521
MroI TCCGGA 1 cut(s) 425
MscI TGGCCA 2 cut(s) 401, 521
MseI TTAA 1 cut(s) 887
Msp20I TGGCCA 2 cut(s) 401, 521
MspA1I CMGCKG 2 cut(s) 110, 602
MspI CCGG 3 cut(s) 426, 1152, 1248
MspR9I CCNGG 2 cut(s) 90, 1248
Mva1269I GAATGC 1 cut(s) 99
MvaI CCWGG 1 cut(s) 90
MvnI CGCG 1 cut(s) 602
MwoI GCNNNNNNNGC 4 cut(s) 692, 845, 869, 1106
NciI CCSGG 1 cut(s) 1248
NcoI CCATGG 2 cut(s) 588, 1235
NdeI CATATG 1 cut(s) 653
NdeII GATC 5 cut(s) 66, 122, 435, 639, 1269
NlaIII CATG 6 cut(s) 496, 576, 592, 638, 933, 1239
NlaIV GGNNCC 2 cut(s) 358, 606
NmeAIII GCCGAG 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1132
PciSI GCTCTTC 1 cut(s) 503
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 99
PfeI GAWTC 6 cut(s) 388, 429, 671, 742, 768, 829
PfoI TCCNGGA 2 cut(s) 88, 1246
PkrI GCNGC 5 cut(s) 55, 112, 214, 235, 784
PshAI GACNNNNGTC 1 cut(s) 973
Psp124BI GAGCTC 3 cut(s) 204, 1051, 1141
Psp1406I AACGTT 1 cut(s) 1127
Psp6I CCWGG 1 cut(s) 88
PspFI CCCAGC 2 cut(s) 106, 665
PspGI CCWGG 1 cut(s) 88
PspN4I GGNNCC 2 cut(s) 358, 606
PspPI GGNCC 2 cut(s) 86, 543
PsuI RGATCY 1 cut(s) 122
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 1 cut(s) 618
RsaNI GTAC 1 cut(s) 617
SacI GAGCTC 3 cut(s) 204, 1051, 1141
SacII CCGCGG 1 cut(s) 603
SapI GCTCTTC 1 cut(s) 503
SaqAI TTAA 1 cut(s) 887
SatI GCNGC 5 cut(s) 54, 111, 213, 234, 783
Sau3AI GATC 5 cut(s) 66, 122, 435, 639, 1269
Sau96I GGNCC 2 cut(s) 86, 543
ScrFI CCNGG 2 cut(s) 90, 1248
SduI GDGCHC 3 cut(s) 204, 1051, 1141
SfaNI GCATC 2 cut(s) 673, 1065
Sfr274I CTCGAG 1 cut(s) 1132
Sfr303I CCGCGG 1 cut(s) 603
SgrBI CCGCGG 1 cut(s) 603
SinI GGWCC 2 cut(s) 86, 543
SlaI CTCGAG 1 cut(s) 1132
SmlI CTYRAG 1 cut(s) 1132
SmoI CTYRAG 1 cut(s) 1132
Sse9I AATT 3 cut(s) 281, 747, 1104
SsiI CCGC 3 cut(s) 600, 602, 708
SspMI CTAG 3 cut(s) 419, 540, 626
SstI GAGCTC 3 cut(s) 204, 1051, 1141
StyD4I CCNGG 2 cut(s) 88, 1246
StyI CCWWGG 3 cut(s) 588, 1087, 1235
TaaI ACNGT 3 cut(s) 775, 1169, 1215
TaiI ACGT 2 cut(s) 174, 1130
TaqI TCGA 3 cut(s) 140, 924, 1133
TasI AATT 3 cut(s) 281, 747, 1104
TfiI GAWTC 6 cut(s) 388, 429, 671, 742, 768, 829
Tru1I TTAA 1 cut(s) 887
Tru9I TTAA 1 cut(s) 887
TscAI CASTG 1 cut(s) 778
TseI GCWGC 5 cut(s) 53, 110, 212, 233, 782
TspDTI ATGAA 4 cut(s) 401, 623, 640, 1050
TspRI CASTG 1 cut(s) 778
VpaK11BI GGWCC 2 cut(s) 86, 543
XapI RAATTY 1 cut(s) 281
XhoI CTCGAG 1 cut(s) 1132
XspI CTAG 3 cut(s) 419, 540, 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.