Prupe.7G001500_v2.0.a1

Tryptophan/tyrosine permease family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0019590
Physical Location & Seq
Reverse (-)
216927 .. 219940
3014 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G001500.1

Sequence Viewer

Length: 1584 bp
ATGCTCCACCTTCGTCTTCGTCTTCCCAACCCTTCCAAACATAACTCATTCCCACCTCCACCCAACAATCCTAATCTAATTACTACAACAATCAACCCCATTTTCACTCCAAGCAACCACAATCCCACTCACATTGCTCAAAGCTTCAGATCCTACAAAACTTTAGCAGCTTCCACCACCACTTCTGCTAACAATGGGGTCATTGATAAAGATAACCCAACTGATTTCCAGGAAGGTGAACAAGGGAGCAGCCAACACAAGAACTTCTGGGGAGCTGTTAGTTTGATCATTGGCACTGCTGTAGGTCCTGGCATGCTGGGTTTGCCAGCTGAAACCATTCGATCAGGCCCTCTTCCCTCAACTATTGCCATTCTCGTCTCTTGGGTCTATGTCATCTCCTCAATTATCCTTATTGCTGAGCTCAGCTTCGCGGCCATGGAAGAAGATGGGGTTGAAGAGGTAAGCTTCACTGGCCTTGCAACAAAAGCATTGGGAAGTCACTTTGGTGCATTTATTGCTGTGGTCTATGCTTGTTTGAGCTTTGCCTTGTTGGTGGCCTGTGTTTCGGGTATCGGTTCAATTGTTTCTCAGTTGTTTCCTCGTATGAATCTTGTAATGGCTCATGCTTTGTTTCCTCTTGCGGCTGGATTAGTGATTATTTTCTTTCCTTTTAACGTCATTGATGCTGCAAACCGTTTTCTATGCTTGCTCATGCTTTTCTCCATAACTGCACTTGTGGCCATTGGTTTATCTGTGGCCAGAACCAACTTGTTTGCTTCATTTGGACATGCCTCGTGGAGTCTCCCTTCAATCTTACCAGCCATTCCTGTCACTGTCCTCACATTGGGGTTCCATGTTATCACCCCTTTCATTTGCAAGATTGCTGGGAACACCATAGCTGAGGCTCGGAAAGCCATTCTGATTGGCGGTTCTGTTCCATTAATTATGGTGTTGTCATGGAATTTGAGTGTGCTGGGGCTTTCTGGGGCAAACACAACAGCCTCCTCCAGAGACCCTATATCCCTTCTGCTTTCAGTCAATCCCTCTGCTTTATCTGCAGTCCAAGGATTTGCCTTCTCTGCTTTGGCAACCAGCTTGATTGGTTATGCTGTTAGCTTCCCAAAACAGCTTCTTGATACTCTGGAATTGATTAGAAAAATCAACCTGAAAAAACAAAGTTATTCTGAAATACAACTAGGTTCTGAAGGCAATGGTTTTGGAGGAGTTGGGTTTGCTGTTTATTCAGGAAGGCATAATCTTGGAAATGCAGGGAGGGCTTCATTTACCAGTTCAGGGTGTAGTGCTGCTTCAGAAGCTAAATTGGGATCAAGCATTAATATCATTGTAATGCCGCTTGTACTTGGTGTTCCAGTGCTTATAGCTTCTTTCTTTCGCTCGACCTTTTCCAGAGCTCTTGATTTTGCTGGGCTTTATGCAAACTGCTTTCTATTTGGCATCCTTCCTCCAGCAATGGCTTACATACACCAATCCAGGAAGAAATCCAGGTCATCCATTTTGCCAGGGGGAAATGGTGCACTTCTACTCCTCTTTGGAATTGCTGTCATTTTGGGGATTTGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Trp_Tyr_perm

Protein Analysis

528

Amino Acids

55.54

Weight (kDa)

9.33

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019590)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33260 AT2G33260
fragaria_vesca FvH4_2g12801
malus_domestica MD14G1001300.v1.1
prunus_persica Prupe.7G001500_v2.0.a1
pyrus_communis pycom12g00130 pycom49g00080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 431
AciI CCGC 4 cut(s) 431, 641, 927, 1352
AclWI GGATC 2 cut(s) 144, 1333
AcoI YGGCCR 3 cut(s) 432, 738, 756
AcsI RAATTY 1 cut(s) 961
AcuI CTGAAG 3 cut(s) 130, 1224, 1293
AfaI GTAC 1 cut(s) 1359
AfiI CCNNNNNNNGG 2 cut(s) 844, 1293
AgsI TTSAA 3 cut(s) 455, 579, 810
AjnI CCWGG 5 cut(s) 228, 307, 1490, 1502, 1519
AleI CACNNNNGTG 1 cut(s) 504
Alw21I GWGCWC 3 cut(s) 423, 1414, 1537
Alw26I GTCTC 3 cut(s) 382, 806, 1005
Alw44I GTGCAC 1 cut(s) 1533
AlwI GGATC 2 cut(s) 144, 1333
AoxI GGCC 6 cut(s) 346, 432, 472, 555, 738, 756
ApaLI GTGCAC 1 cut(s) 1533
ApeKI GCWGC 4 cut(s) 167, 249, 686, 1304
ApoI RAATTY 1 cut(s) 961
AseI ATTAAT 2 cut(s) 941, 1335
Asp700I GAANNNNTTC 1 cut(s) 336
AspS9I GGNCC 2 cut(s) 305, 347
AsuHPI GGTGA 2 cut(s) 248, 853
AvaII GGWCC 1 cut(s) 305
BaeGI GKGCMC 1 cut(s) 1537
BalI TGGCCA 2 cut(s) 740, 758
BanII GRGCYC 2 cut(s) 423, 1414
BarI GAAGNNNNNNTAC 2 cut(s) 1291, 1323
BauI CACGAG 1 cut(s) 793
BbsI GAAGAC 2 cut(s) 8, 14
Bbv12I GWGCWC 3 cut(s) 423, 1414, 1537
BbvCI CCTCAGC 1 cut(s) 900
BbvI GCAGC 4 cut(s) 179, 261, 673, 1291
BccI CCATC 1 cut(s) 440
BciT130I CCWGG 5 cut(s) 230, 309, 1492, 1504, 1521
BclI TGATCA 1 cut(s) 285
BcoDI GTCTC 3 cut(s) 382, 806, 1005
BfaI CTAG 1 cut(s) 1196
BfmI CTRYAG 2 cut(s) 300, 1056
BisI GCNGC 7 cut(s) 168, 250, 432, 642, 687, 1305, 1352
BlpI GCTNAGC 2 cut(s) 417, 422
BlsI GCNGC 7 cut(s) 169, 251, 433, 643, 688, 1306, 1353
Bme1390I CCNGG 5 cut(s) 230, 309, 1492, 1504, 1521
Bme18I GGWCC 1 cut(s) 305
BmgT120I GGNCC 2 cut(s) 305, 347
BmiI GGNNCC 1 cut(s) 851
BmrFI CCNGG 5 cut(s) 230, 309, 1492, 1504, 1521
BmsI GCATC 2 cut(s) 673, 1464
BpiI GAAGAC 2 cut(s) 8, 14
BpmI CTGGAG 2 cut(s) 991, 1449
Bpu10I CCTNAGC 1 cut(s) 900
Bpu1102I GCTNAGC 2 cut(s) 417, 422
BsaI GGTCTC 1 cut(s) 1005
BsaJI CCNNGG 3 cut(s) 435, 1063, 1520
BsaXI ACNNNNNCTCC 2 cut(s) 1527, 1557
Bsc4I CCNNNNNNNGG 2 cut(s) 844, 1293
Bse1I ACTGG 3 cut(s) 475, 1287, 1370
Bse3DI GCAATG 3 cut(s) 132, 1216, 1476
BseBI CCWGG 5 cut(s) 230, 309, 1492, 1504, 1521
BseDI CCNNGG 3 cut(s) 435, 1063, 1520
BseGI GGATG 2 cut(s) 1455, 1508
BseLI CCNNNNNNNGG 2 cut(s) 844, 1293
BseMI GCAATG 3 cut(s) 132, 1216, 1476
BseMII CTCAG 4 cut(s) 408, 436, 602, 891
BseNI ACTGG 3 cut(s) 475, 1287, 1370
BseRI GAGGAG 4 cut(s) 388, 994, 1236, 1535
BseSI GKGCMC 1 cut(s) 1537
BseXI GCAGC 4 cut(s) 179, 261, 673, 1291
BseYI CCCAGC 4 cut(s) 316, 884, 973, 1424
BsgI GTGCAG 1 cut(s) 714
Bsh1236I CGCG 1 cut(s) 431
BshFI GGCC 6 cut(s) 348, 434, 474, 557, 740, 758
BsiHKAI GWGCWC 3 cut(s) 423, 1414, 1537
BslI CCNNNNNNNGG 2 cut(s) 844, 1293
BsmAI GTCTC 3 cut(s) 382, 806, 1005
BsmBI CGTCTC 1 cut(s) 382
BsnI GGCC 6 cut(s) 348, 434, 474, 557, 740, 758
Bso31I GGTCTC 1 cut(s) 1005
Bsp1286I GDGCHC 3 cut(s) 423, 1414, 1537
Bsp143I GATC 4 cut(s) 149, 285, 341, 1325
Bsp1720I GCTNAGC 2 cut(s) 417, 422
Bsp19I CCATGG 1 cut(s) 435
BspACI CCGC 4 cut(s) 431, 641, 927, 1352
BspANI GGCC 6 cut(s) 348, 434, 474, 557, 740, 758
BspCNI CTCAG 4 cut(s) 409, 435, 601, 892
BspFNI CGCG 1 cut(s) 431
BspLI GGNNCC 1 cut(s) 851
BspMAI CTGCAG 1 cut(s) 1060
BspPI GGATC 2 cut(s) 144, 1333
BspTNI GGTCTC 1 cut(s) 1005
BsrDI GCAATG 3 cut(s) 132, 1216, 1476
BsrI ACTGG 3 cut(s) 475, 1287, 1370
BssECI CCNNGG 3 cut(s) 435, 1063, 1520
BssMI GATC 4 cut(s) 149, 285, 341, 1325
BssSI CACGAG 1 cut(s) 793
BssT1I CCWWGG 2 cut(s) 435, 1063
Bst2BI CACGAG 1 cut(s) 793
Bst2UI CCWGG 5 cut(s) 230, 309, 1492, 1504, 1521
Bst4CI ACNGT 2 cut(s) 695, 835
Bst6I CTCTTC 2 cut(s) 357, 450
BstAPI GCANNNNNTGC 1 cut(s) 515
BstC8I GCNNGC 3 cut(s) 314, 327, 707
BstDEI CTNAG 4 cut(s) 417, 422, 588, 900
BstDSI CCRYGG 1 cut(s) 435
BstF5I GGATG 2 cut(s) 1455, 1508
BstFNI CGCG 1 cut(s) 431
BstKTI GATC 4 cut(s) 152, 288, 344, 1328
BstMAI GTCTC 3 cut(s) 382, 806, 1005
BstMBI GATC 4 cut(s) 149, 285, 341, 1325
BstNI CCWGG 5 cut(s) 230, 309, 1492, 1504, 1521
BstNSI RCATGY 2 cut(s) 316, 791
BstSCI CCNGG 5 cut(s) 228, 307, 1490, 1502, 1519
BstSFI CTRYAG 2 cut(s) 300, 1056
BstSLI GKGCMC 1 cut(s) 1537
BstUI CGCG 1 cut(s) 431
BstV1I GCAGC 4 cut(s) 179, 261, 673, 1291
BstV2I GAAGAC 2 cut(s) 8, 14
BstX2I RGATCY 1 cut(s) 149
BstYI RGATCY 1 cut(s) 149
BsuRI GGCC 6 cut(s) 348, 434, 474, 557, 740, 758
BtgI CCRYGG 1 cut(s) 435
BtsCI GGATG 2 cut(s) 1455, 1508
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 4 cut(s) 294, 468, 831, 1377
Cac8I GCNNGC 3 cut(s) 314, 327, 707
Cfr13I GGNCC 2 cut(s) 305, 347
Csp6I GTAC 1 cut(s) 1358
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviAII CATG 7 cut(s) 313, 436, 623, 712, 788, 854, 957
CviQI GTAC 1 cut(s) 1358
DdeI CTNAG 4 cut(s) 417, 422, 588, 900
DpnI GATC 4 cut(s) 151, 287, 343, 1327
DpnII GATC 4 cut(s) 149, 285, 341, 1325
EaeI YGGCCR 3 cut(s) 432, 738, 756
Eam1104I CTCTTC 2 cut(s) 357, 450
EarI CTCTTC 2 cut(s) 357, 450
Ecl136II GAGCTC 2 cut(s) 421, 1412
Eco130I CCWWGG 2 cut(s) 435, 1063
Eco24I GRGCYC 2 cut(s) 423, 1414
Eco31I GGTCTC 1 cut(s) 1005
Eco47I GGWCC 1 cut(s) 305
Eco53kI GAGCTC 2 cut(s) 421, 1412
Eco57I CTGAAG 3 cut(s) 130, 1224, 1293
EcoICRI GAGCTC 2 cut(s) 421, 1412
EcoO109I RGGNCCY 2 cut(s) 305, 347
EcoRII CCWGG 5 cut(s) 228, 307, 1490, 1502, 1519
EcoT14I CCWWGG 2 cut(s) 435, 1063
EcoT38I GRGCYC 2 cut(s) 423, 1414
ErhI CCWWGG 2 cut(s) 435, 1063
Esp3I CGTCTC 1 cut(s) 382
FaeI CATG 7 cut(s) 316, 439, 626, 715, 791, 857, 960
FatI CATG 7 cut(s) 312, 435, 622, 711, 787, 853, 956
FbaI TGATCA 1 cut(s) 285
Fnu4HI GCNGC 7 cut(s) 168, 250, 432, 642, 687, 1305, 1352
FokI GGATG 2 cut(s) 1442, 1495
FriOI GRGCYC 2 cut(s) 423, 1414
Fsp4HI GCNGC 7 cut(s) 168, 250, 432, 642, 687, 1305, 1352
FspBI CTAG 1 cut(s) 1196
GluI GCNGC 7 cut(s) 168, 250, 432, 642, 687, 1305, 1352
GsaI CCCAGC 4 cut(s) 320, 888, 977, 1428
GsuI CTGGAG 2 cut(s) 991, 1449
HaeIII GGCC 6 cut(s) 348, 434, 474, 557, 740, 758
Hin1II CATG 7 cut(s) 316, 439, 626, 715, 791, 857, 960
HindIII AAGCTT 2 cut(s) 142, 463
HinfI GANTC 2 cut(s) 607, 799
HphI GGTGA 2 cut(s) 248, 853
Hpy166II GTNNAC 2 cut(s) 239, 1535
Hpy188I TCNGA 6 cut(s) 149, 909, 921, 1186, 1204, 1312
Hpy188III TCNNGA 6 cut(s) 1008, 1133, 1142, 1245, 1407, 1415
Hpy8I GTNNAC 2 cut(s) 239, 1535
HpyAV CCTTC 9 cut(s) 20, 42, 227, 816, 1034, 1084, 1199, 1242, 1469
HpyCH4III ACNGT 2 cut(s) 695, 835
HpyCH4IV ACGT 1 cut(s) 675
HpyCH4V TGCA 9 cut(s) 479, 509, 689, 731, 876, 1058, 1268, 1436, 1535
HpyF3I CTNAG 4 cut(s) 417, 422, 588, 900
HpySE526I ACGT 1 cut(s) 675
Hsp92II CATG 7 cut(s) 316, 439, 626, 715, 791, 857, 960
Ksp22I TGATCA 1 cut(s) 285
Kzo9I GATC 4 cut(s) 149, 285, 341, 1325
LmnI GCTCC 3 cut(s) 9, 246, 272
Lsp1109I GCAGC 4 cut(s) 179, 261, 673, 1291
LweI GCATC 2 cut(s) 673, 1464
MaeI CTAG 1 cut(s) 1196
MaeII ACGT 1 cut(s) 675
MaeIII GTNAC 2 cut(s) 497, 829
MalI GATC 4 cut(s) 151, 287, 343, 1327
MboI GATC 4 cut(s) 149, 285, 341, 1325
MboII GAAGA 7 cut(s) 8, 14, 344, 452, 455, 467, 1507
MfeI CAATTG 1 cut(s) 579
MflI RGATCY 1 cut(s) 149
MhlI GDGCHC 3 cut(s) 423, 1414, 1537
MlsI TGGCCA 2 cut(s) 740, 758
MluCI AATT 8 cut(s) 78, 402, 579, 942, 961, 1145, 1319, 1554
MluNI TGGCCA 2 cut(s) 740, 758
MlyI GAGTC 1 cut(s) 808
Mox20I TGGCCA 2 cut(s) 740, 758
MroXI GAANNNNTTC 1 cut(s) 336
MscI TGGCCA 2 cut(s) 740, 758
MseI TTAA 3 cut(s) 672, 941, 1335
MslI CAYNNNNRTG 2 cut(s) 504, 1346
Msp20I TGGCCA 2 cut(s) 740, 758
MspA1I CMGCKG 1 cut(s) 329
MspR9I CCNGG 5 cut(s) 230, 309, 1492, 1504, 1521
MunI CAATTG 1 cut(s) 579
MvaI CCWGG 5 cut(s) 230, 309, 1492, 1504, 1521
MvnI CGCG 1 cut(s) 431
NcoI CCATGG 1 cut(s) 435
NdeII GATC 4 cut(s) 149, 285, 341, 1325
NlaIII CATG 7 cut(s) 316, 439, 626, 715, 791, 857, 960
NlaIV GGNNCC 1 cut(s) 851
NmuCI GTSAC 2 cut(s) 497, 829
NspI RCATGY 2 cut(s) 316, 791
OliI CACNNNNGTG 1 cut(s) 504
PaeI GCATGC 1 cut(s) 316
PdmI GAANNNNTTC 1 cut(s) 336
PfeI GAWTC 1 cut(s) 607
PfoI TCCNGGA 2 cut(s) 228, 1490
PkrI GCNGC 7 cut(s) 169, 251, 433, 643, 688, 1306, 1353
PleI GAGTC 1 cut(s) 807
PpsI GAGTC 1 cut(s) 807
PpuMI RGGWCCY 1 cut(s) 305
PshBI ATTAAT 2 cut(s) 941, 1335
Psp124BI GAGCTC 2 cut(s) 423, 1414
Psp5II RGGWCCY 1 cut(s) 305
Psp6I CCWGG 5 cut(s) 228, 307, 1490, 1502, 1519
PspFI CCCAGC 4 cut(s) 316, 884, 973, 1424
PspGI CCWGG 5 cut(s) 228, 307, 1490, 1502, 1519
PspN4I GGNNCC 1 cut(s) 851
PspPI GGNCC 2 cut(s) 305, 347
PspPPI RGGWCCY 1 cut(s) 305
PsrI GAACNNNNNNTAC 2 cut(s) 1350, 1382
PstI CTGCAG 1 cut(s) 1060
PsuI RGATCY 1 cut(s) 149
PvuII CAGCTG 1 cut(s) 329
RsaI GTAC 1 cut(s) 1359
RsaNI GTAC 1 cut(s) 1358
RseI CAYNNNNRTG 2 cut(s) 504, 1346
SacI GAGCTC 2 cut(s) 423, 1414
SaqAI TTAA 3 cut(s) 672, 941, 1335
SatI GCNGC 7 cut(s) 168, 250, 432, 642, 687, 1305, 1352
Sau3AI GATC 4 cut(s) 149, 285, 341, 1325
Sau96I GGNCC 2 cut(s) 305, 347
SchI GAGTC 1 cut(s) 808
ScrFI CCNGG 5 cut(s) 230, 309, 1492, 1504, 1521
SduI GDGCHC 3 cut(s) 423, 1414, 1537
SfaNI GCATC 2 cut(s) 673, 1464
SfcI CTRYAG 2 cut(s) 300, 1056
SinI GGWCC 1 cut(s) 305
SmiMI CAYNNNNRTG 2 cut(s) 504, 1346
SphI GCATGC 1 cut(s) 316
Sse9I AATT 8 cut(s) 78, 402, 579, 942, 961, 1145, 1319, 1554
SsiI CCGC 4 cut(s) 431, 641, 927, 1352
SspMI CTAG 1 cut(s) 1196
SstI GAGCTC 2 cut(s) 423, 1414
StyD4I CCNGG 5 cut(s) 228, 307, 1490, 1502, 1519
StyI CCWWGG 2 cut(s) 435, 1063
TaaI ACNGT 2 cut(s) 695, 835
TaiI ACGT 1 cut(s) 678
TaqI TCGA 2 cut(s) 340, 1397
TasI AATT 8 cut(s) 78, 402, 579, 942, 961, 1145, 1319, 1554
TatI WGTACW 1 cut(s) 1357
TauI GCSGC 3 cut(s) 434, 644, 1354
TfiI GAWTC 1 cut(s) 607
Tru1I TTAA 3 cut(s) 672, 941, 1335
Tru9I TTAA 3 cut(s) 672, 941, 1335
TscAI CASTG 4 cut(s) 301, 475, 838, 1377
TseFI GTSAC 2 cut(s) 497, 829
TseI GCWGC 4 cut(s) 167, 249, 686, 1304
Tsp45I GTSAC 2 cut(s) 497, 829
TspDTI ATGAA 4 cut(s) 620, 768, 859, 1269
TspRI CASTG 4 cut(s) 301, 475, 838, 1377
VneI GTGCAC 1 cut(s) 1533
VpaK11BI GGWCC 1 cut(s) 305
VspI ATTAAT 2 cut(s) 941, 1335
XapI RAATTY 1 cut(s) 961
XceI RCATGY 2 cut(s) 316, 791
XmnI GAANNNNTTC 1 cut(s) 336
XspI CTAG 1 cut(s) 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.