Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0018310

Physical Location & Seq

Genomic Coordinates Reverse (-)

14954883 .. 14955605

Gene Structure 723 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G35612.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 261 bp

ATGGTGTCTCGCGGTTGTTCAATCACAGTTTTGTTTCGCTTTCTTATAGTTCTTTTGGTGATACAAGTACACTTTGAGAATACAAAAGCAGCTCGACATGCACCAGTTGTTTCGTGGTCACCACCTGAGCCGCCTAAGGATGATTTTGTGTGGTACCACAAGATCAACCGCTTCAAAAACATAGAACAAGATGCATTCCGACCAACCCACCAAGGTCCTAGTCAAGGTATTGGACACAAAAACCCTCCAGGTGCTCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005102 GO:0005179 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006970 GO:0006995 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009966 GO:0009987 GO:0009991 GO:0010469 GO:0010646 GO:0015698 GO:0015706 GO:0022603 GO:0023051 GO:0030545 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042594 GO:0043562 GO:0048018 GO:0048046 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051716 GO:0060359 GO:0065007 GO:0065009 GO:0071496 GO:0071705 GO:0098772 GO:1900618 GO:1901371 GO:1901698 GO:1902025 GO:1905421 GO:2000024 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

86

Amino Acids

9.76

Weight (kDa)

9.74

Isoelectric Point (pI)

54.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31670 AT2G35612
fragaria_vesca	FvH4_5g24910
prunus_persica	Prupe.5G014000_v2.0.a1
rosa_roxburghii	Rroxscaffold_3G00244440
rosa_samantha	Rh7AG287900 Rh7BG279700 Rh7CG307700 Rh7DG291200
rosa_wichuraiana	Rw7G024580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	153
AccB1I	GGYRCC	1 cut(s)	153
AccII	CGCG	1 cut(s)	12
AciI	CCGC	3 cut(s)	12, 131, 169
AfaI	GTAC	2 cut(s)	69, 155
AfiI	CCNNNNNNNGG	1 cut(s)	224
AgsI	TTSAA	2 cut(s)	21, 175
AjnI	CCWGG	1 cut(s)	247
AluBI	AGCT	1 cut(s)	92
AluI	AGCT	1 cut(s)	92
Alw21I	GWGCWC	1 cut(s)	256
Alw26I	GTCTC	1 cut(s)	12
ApeKI	GCWGC	1 cut(s)	89
Asp718I	GGTACC	1 cut(s)	153
AspS9I	GGNCC	1 cut(s)	215
AsuHPI	GGTGA	2 cut(s)	70, 111
AvaII	GGWCC	1 cut(s)	215
AxyI	CCTNAGG	1 cut(s)	135
BanI	GGYRCC	1 cut(s)	153
Bbv12I	GWGCWC	1 cut(s)	256
BbvI	GCAGC	1 cut(s)	101
BciT130I	CCWGG	1 cut(s)	249
BcoDI	GTCTC	1 cut(s)	12
BfaI	CTAG	1 cut(s)	219
BisI	GCNGC	2 cut(s)	90, 131
BlsI	GCNGC	2 cut(s)	91, 132
Bme1390I	CCNGG	1 cut(s)	249
Bme18I	GGWCC	1 cut(s)	215
BmgT120I	GGNCC	1 cut(s)	215
BmiI	GGNNCC	1 cut(s)	155
BmrFI	CCNGG	1 cut(s)	249
BmsI	GCATC	1 cut(s)	181
BpmI	CTGGAG	1 cut(s)	231
Bpu10I	CCTNAGC	1 cut(s)	126
BsaJI	CCNNGG	1 cut(s)	211
Bsc4I	CCNNNNNNNGG	1 cut(s)	224
Bse1I	ACTGG	1 cut(s)	104
Bse21I	CCTNAGG	1 cut(s)	135
BseBI	CCWGG	1 cut(s)	249
BseDI	CCNNGG	1 cut(s)	211
BseGI	GGATG	1 cut(s)	145
BseLI	CCNNNNNNNGG	1 cut(s)	224
BseMII	CTCAG	1 cut(s)	117
BseNI	ACTGG	1 cut(s)	104
BseXI	GCAGC	1 cut(s)	101
Bsh1236I	CGCG	1 cut(s)	12
BshNI	GGYRCC	1 cut(s)	153
BsiHKAI	GWGCWC	1 cut(s)	256
BslI	CCNNNNNNNGG	1 cut(s)	224
BsmAI	GTCTC	1 cut(s)	12
BsmI	GAATGC	1 cut(s)	194
Bsp1286I	GDGCHC	1 cut(s)	256
Bsp143I	GATC	1 cut(s)	162
BspACI	CCGC	3 cut(s)	12, 131, 169
BspCNI	CTCAG	1 cut(s)	118
BspFNI	CGCG	1 cut(s)	12
BspLI	GGNNCC	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	153
BsrI	ACTGG	1 cut(s)	104
BssECI	CCNNGG	1 cut(s)	211
BssMI	GATC	1 cut(s)	162
BssT1I	CCWWGG	1 cut(s)	211
Bst2UI	CCWGG	1 cut(s)	249
Bst4CI	ACNGT	1 cut(s)	28
BstDEI	CTNAG	2 cut(s)	126, 135
BstEII	GGTNACC	1 cut(s)	117
BstENI	CCTNNNNNAGG	1 cut(s)	222
BstF5I	GGATG	1 cut(s)	145
BstFNI	CGCG	1 cut(s)	12
BstKTI	GATC	1 cut(s)	165
BstMAI	GTCTC	1 cut(s)	12
BstMBI	GATC	1 cut(s)	162
BstMWI	GCNNNNNNNGC	1 cut(s)	98
BstNI	CCWGG	1 cut(s)	249
BstNSI	RCATGY	1 cut(s)	101
BstPI	GGTNACC	1 cut(s)	117
BstSCI	CCNGG	1 cut(s)	247
BstUI	CGCG	1 cut(s)	12
BstV1I	GCAGC	1 cut(s)	101
Bsu36I	CCTNAGG	1 cut(s)	135
BtsCI	GGATG	1 cut(s)	145
Cfr13I	GGNCC	1 cut(s)	215
Csp6I	GTAC	2 cut(s)	68, 154
CviAII	CATG	1 cut(s)	98
CviJI	RGCY	2 cut(s)	92, 130
CviKI_1	RGCY	2 cut(s)	92, 130
CviQI	GTAC	2 cut(s)	68, 154
DdeI	CTNAG	2 cut(s)	126, 135
DpnI	GATC	1 cut(s)	164
DpnII	GATC	1 cut(s)	162
Eco130I	CCWWGG	1 cut(s)	211
Eco47I	GGWCC	1 cut(s)	215
Eco81I	CCTNAGG	1 cut(s)	135
Eco91I	GGTNACC	1 cut(s)	117
EcoNI	CCTNNNNNAGG	1 cut(s)	222
EcoO109I	RGGNCCY	1 cut(s)	215
EcoO65I	GGTNACC	1 cut(s)	117
EcoRII	CCWGG	1 cut(s)	247
EcoT14I	CCWWGG	1 cut(s)	211
EcoT22I	ATGCAT	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	211
FaeI	CATG	1 cut(s)	101
FaiI	YATR	3 cut(s)	47, 99, 182
FatI	CATG	1 cut(s)	97
Fnu4HI	GCNGC	2 cut(s)	90, 131
FokI	GGATG	1 cut(s)	152
Fsp4HI	GCNGC	2 cut(s)	90, 131
FspBI	CTAG	1 cut(s)	219
GluI	GCNGC	2 cut(s)	90, 131
GsuI	CTGGAG	1 cut(s)	231
Hin1II	CATG	1 cut(s)	101
HphI	GGTGA	2 cut(s)	70, 111
Hpy166II	GTNNAC	1 cut(s)	70
Hpy188I	TCNGA	1 cut(s)	200
Hpy8I	GTNNAC	1 cut(s)	70
HpyCH4III	ACNGT	1 cut(s)	28
HpyCH4V	TGCA	2 cut(s)	101, 194
HpyF10VI	GCNNNNNNNGC	1 cut(s)	98
HpyF3I	CTNAG	2 cut(s)	126, 135
Hsp92II	CATG	1 cut(s)	101
KpnI	GGTACC	1 cut(s)	157
Kzo9I	GATC	1 cut(s)	162
LmnI	GCTCC	1 cut(s)	259
LpnPI	CCDG	3 cut(s)	117, 138, 234
Lsp1109I	GCAGC	1 cut(s)	101
LweI	GCATC	1 cut(s)	181
MaeI	CTAG	1 cut(s)	219
MaeIII	GTNAC	1 cut(s)	117
MalI	GATC	1 cut(s)	164
MboI	GATC	1 cut(s)	162
MhlI	GDGCHC	1 cut(s)	256
MmeI	TCCRAC	1 cut(s)	223
MnlI	CCTC	1 cut(s)	255
Mph1103I	ATGCAT	1 cut(s)	196
MseI	TTAA	1 cut(s)	259
MspR9I	CCNGG	1 cut(s)	249
Mva1269I	GAATGC	1 cut(s)	194
MvaI	CCWGG	1 cut(s)	249
MvnI	CGCG	1 cut(s)	12
MwoI	GCNNNNNNNGC	1 cut(s)	98
NdeII	GATC	1 cut(s)	162
NlaIII	CATG	1 cut(s)	101
NlaIV	GGNNCC	1 cut(s)	155
NmuCI	GTSAC	1 cut(s)	117
NsiI	ATGCAT	1 cut(s)	196
NspI	RCATGY	1 cut(s)	101
PctI	GAATGC	1 cut(s)	194
PkrI	GCNGC	2 cut(s)	91, 132
PpuMI	RGGWCCY	1 cut(s)	215
Psp5II	RGGWCCY	1 cut(s)	215
Psp6I	CCWGG	1 cut(s)	247
PspEI	GGTNACC	1 cut(s)	117
PspGI	CCWGG	1 cut(s)	247
PspN4I	GGNNCC	1 cut(s)	155
PspPI	GGNCC	1 cut(s)	215
PspPPI	RGGWCCY	1 cut(s)	215
RsaI	GTAC	2 cut(s)	69, 155
RsaNI	GTAC	2 cut(s)	68, 154
SaqAI	TTAA	1 cut(s)	259
SatI	GCNGC	2 cut(s)	90, 131
Sau3AI	GATC	1 cut(s)	162
Sau96I	GGNCC	1 cut(s)	215
ScrFI	CCNGG	1 cut(s)	249
SduI	GDGCHC	1 cut(s)	256
SetI	ASST	5 cut(s)	94, 127, 217, 229, 253
SfaNI	GCATC	1 cut(s)	181
SinI	GGWCC	1 cut(s)	215
SsiI	CCGC	3 cut(s)	12, 131, 169
SspMI	CTAG	1 cut(s)	219
StyD4I	CCNGG	1 cut(s)	247
StyI	CCWWGG	1 cut(s)	211
TaaI	ACNGT	1 cut(s)	28
TaqI	TCGA	1 cut(s)	94
TatI	WGTACW	1 cut(s)	67
TauI	GCSGC	1 cut(s)	133
Tru1I	TTAA	1 cut(s)	259
Tru9I	TTAA	1 cut(s)	259
TseFI	GTSAC	1 cut(s)	117
TseI	GCWGC	1 cut(s)	89
Tsp45I	GTSAC	1 cut(s)	117
VpaK11BI	GGWCC	1 cut(s)	215
XagI	CCTNNNNNAGG	1 cut(s)	222
XceI	RCATGY	1 cut(s)	101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	111
XspI	CTAG	1 cut(s)	219
Zsp2I	ATGCAT	1 cut(s)	196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.