AT2G44810

Phospholipase A(1) DAD1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
18478374 .. 18480457
2084 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G44810.1

Sequence Viewer

Length: 1074 bp
ATGGAGTATCAGGGGCTTCAAAATTGGGACGGTCTTTTAGACCCATTGGACGACAATCTCCGGCGAGAGATTCTCCGGTACGGTCAATTTGTCGAATCGGCTTATCAAGCATTTGATTTCGATCCTTCCTCTCCAACCTACGGGACATGCCGGTTTCCGAGGAGCACGTTGTTAGAGCGATCCGGTTTACCCAACTCCGGTTATCGACTAACGAAGAACCTTCGTGCCACGTCAGGTATTAACTTGCCACGTTGGATTGAGAAAGCGCCAAGCTGGATGGCTACACAATCTAGCTGGATTGGTTACGTGGCAGTTTGCCAGGACAAAGAAGAGATCTCGCGGCTTGGGCGTAGAGACGTCGTCATCTCCTTCCGTGGAACCGCCACGTGTCTCGAGTGGTTAGAGAACCTTCGCGCCACGCTGACTCATCTCCCTAATGGGCCTACTGGAGCAAATCTAAACGGGTCTAACTCTGGGCCCATGGTTGAGAGCGGGTTTTTAAGCTTGTATACTTCAGGTGTTCACAGTTTGAGAGACATGGTAAGAGAAGAGATCGCAAGGCTACTCCAATCTTACGGCGACGAGCCGTTAAGTGTAACGATAACCGGTCACAGCCTCGGCGCTGCGATCGCGACACTAGCAGCTTACGATATCAAAACGACGTTTAAACGTGCGCCTATGGTTACCGTAATATCTTTCGGAGGTCCACGTGTCGGAAACAGATGCTTTCGGAAACTCCTTGAGAAGCAAGGCACGAAGGTTCTAAGAATCGTGAACTCCGACGACGTCATCACCAAAGTTCCTGGAGTTGTTTTAGAAAACAGAGAGCAAGATAACGTTAAGATGACAGCGTCGATAATGCCGAGCTGGATACAGAGACGCGTGGAGGAGACGCCGTGGGTTTACGCTGAAATCGGTAAGGAGCTTCGGCTGAGTAGCCGTGACTCGCCGCACTTGAGCAGCATCAATGTGGCCACGTGTCATGAGCTGAAAACGTATTTACATTTGGTAGACGGGTTTGTGAGCTCCACGTGTCCATTCAGAGAAACAGCTCGGAGAGTTCTCCATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

357

Amino Acids

40.06

Weight (kDa)

8.85

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 121 - 270 8.2e-38 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014224)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 360, 789
AccBSI CCGCTC 1 cut(s) 492
AccI GTMKAC 2 cut(s) 509, 1011
AccII CGCG 4 cut(s) 340, 414, 632, 882
AciI CCGC 4 cut(s) 340, 381, 492, 950
AclI AACGTT 1 cut(s) 837
AclWI GGATC 2 cut(s) 116, 174
AcoI YGGCCR 1 cut(s) 972
AcuI CTGAAG 1 cut(s) 498
AcvI CACGTG 4 cut(s) 387, 710, 978, 1032
AcyI GRCGYC 3 cut(s) 357, 786, 893
AfaI GTAC 1 cut(s) 80
AfiI CCNNNNNNNGG 3 cut(s) 140, 197, 713
AflIII ACRYGT 5 cut(s) 386, 709, 880, 977, 1031
AgeI ACCGGT 1 cut(s) 605
AgsI TTSAA 1 cut(s) 20
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 2 cut(s) 318, 802
AluBI AGCT 9 cut(s) 273, 294, 504, 644, 867, 925, 988, 1026, 1052
AluI AGCT 9 cut(s) 273, 294, 504, 644, 867, 925, 988, 1026, 1052
Alw21I GWGCWC 2 cut(s) 167, 1028
Alw26I GTCTC 5 cut(s) 348, 395, 528, 871, 884
AlwI GGATC 2 cut(s) 116, 174
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 3 cut(s) 440, 476, 972
ApaI GGGCCC 1 cut(s) 480
ApeKI GCWGC 3 cut(s) 623, 641, 960
AsiGI ACCGGT 1 cut(s) 605
AsiSI GCGATCGC 1 cut(s) 630
AspLEI GCGC 4 cut(s) 268, 416, 623, 676
AspS9I GGNCC 4 cut(s) 440, 476, 477, 704
AsuHPI GGTGA 1 cut(s) 784
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 1 cut(s) 704
BaeGI GKGCMC 1 cut(s) 480
BalI TGGCCA 1 cut(s) 974
BanII GRGCYC 2 cut(s) 480, 1028
BbrPI CACGTG 4 cut(s) 387, 710, 978, 1032
Bbv12I GWGCWC 2 cut(s) 167, 1028
BbvI GCAGC 3 cut(s) 610, 653, 972
BccI CCATC 1 cut(s) 271
BceAI ACGGC 4 cut(s) 571, 592, 880, 924
BciT130I CCWGG 2 cut(s) 320, 804
BciVI GTATCC 1 cut(s) 864
BcoDI GTCTC 5 cut(s) 348, 395, 528, 871, 884
BfaI CTAG 2 cut(s) 291, 638
BfoI RGCGCY 2 cut(s) 269, 624
BfuI GTATCC 1 cut(s) 864
BglII AGATCT 1 cut(s) 333
BisI GCNGC 5 cut(s) 341, 624, 642, 950, 961
BlsI GCNGC 5 cut(s) 342, 625, 643, 951, 962
Bme1390I CCNGG 2 cut(s) 320, 804
Bme18I GGWCC 1 cut(s) 704
BmeT110I CYCGRG 1 cut(s) 392
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 4 cut(s) 440, 476, 477, 704
BmiI GGNNCC 2 cut(s) 379, 478
BmrFI CCNGG 2 cut(s) 320, 804
BmsI GCATC 2 cut(s) 713, 972
BplI GAGNNNNNCTC 2 cut(s) 57, 89
BpmI CTGGAG 2 cut(s) 468, 825
BpuEI CTTGAG 2 cut(s) 761, 976
BsaAI YACGTR 5 cut(s) 307, 387, 710, 978, 1032
BsaBI GATNNNNATC 1 cut(s) 120
BsaHI GRCGYC 3 cut(s) 357, 786, 893
BsaJI CCNNGG 5 cut(s) 158, 373, 480, 616, 896
BsaWI WCCGGW 4 cut(s) 75, 182, 197, 605
BsaXI ACNNNNNCTCC 2 cut(s) 881, 911
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 197, 713
Bse118I RCCGGY 2 cut(s) 150, 605
Bse1I ACTGG 1 cut(s) 451
Bse8I GATNNNNATC 1 cut(s) 120
BseBI CCWGG 2 cut(s) 320, 804
BseDI CCNNGG 5 cut(s) 158, 373, 480, 616, 896
BseGI GGATG 1 cut(s) 282
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 3 cut(s) 140, 197, 713
BseMII CTCAG 1 cut(s) 923
BseNI ACTGG 1 cut(s) 451
BseRI GAGGAG 2 cut(s) 175, 902
BseSI GKGCMC 1 cut(s) 480
BseXI GCAGC 3 cut(s) 610, 653, 972
Bsh1236I CGCG 4 cut(s) 340, 414, 632, 882
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 3 cut(s) 442, 478, 974
BshTI ACCGGT 1 cut(s) 605
BsiEI CGRYCG 1 cut(s) 630
BsiHKAI GWGCWC 2 cut(s) 167, 1028
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 6 cut(s) 61, 76, 151, 183, 198, 606
BslFI GGGAC 2 cut(s) 41, 157
BslI CCNNNNNNNGG 3 cut(s) 140, 197, 713
BsmAI GTCTC 5 cut(s) 348, 395, 528, 871, 884
BsmBI CGTCTC 3 cut(s) 348, 871, 884
BsmFI GGGAC 2 cut(s) 41, 157
BsnI GGCC 3 cut(s) 442, 478, 974
BsoBI CYCGRG 1 cut(s) 392
Bsp120I GGGCCC 1 cut(s) 476
Bsp1286I GDGCHC 3 cut(s) 167, 480, 1028
Bsp143I GATC 5 cut(s) 121, 179, 333, 552, 627
Bsp19I CCATGG 1 cut(s) 480
Bsp68I TCGCGA 1 cut(s) 632
BspACI CCGC 4 cut(s) 340, 381, 492, 950
BspANI GGCC 3 cut(s) 442, 478, 974
BspCNI CTCAG 1 cut(s) 924
BspFNI CGCG 4 cut(s) 340, 414, 632, 882
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 2 cut(s) 379, 478
BspPI GGATC 2 cut(s) 116, 174
BsrBI CCGCTC 1 cut(s) 492
BsrFI RCCGGY 2 cut(s) 150, 605
BsrI ACTGG 1 cut(s) 451
BssAI RCCGGY 2 cut(s) 150, 605
BssECI CCNNGG 5 cut(s) 158, 373, 480, 616, 896
BssMI GATC 5 cut(s) 121, 179, 333, 552, 627
BssNAI GTATAC 1 cut(s) 510
BssNI GRCGYC 3 cut(s) 357, 786, 893
BssT1I CCWWGG 1 cut(s) 480
Bst1107I GTATAC 1 cut(s) 510
Bst2UI CCWGG 2 cut(s) 320, 804
Bst4CI ACNGT 4 cut(s) 32, 83, 527, 688
Bst6I CTCTTC 2 cut(s) 324, 543
BstACI GRCGYC 3 cut(s) 357, 786, 893
BstBAI YACGTR 5 cut(s) 307, 387, 710, 978, 1032
BstDEI CTNAG 2 cut(s) 764, 932
BstDSI CCRYGG 3 cut(s) 373, 480, 896
BstEII GGTNACC 1 cut(s) 682
BstF5I GGATG 1 cut(s) 282
BstFNI CGCG 4 cut(s) 340, 414, 632, 882
BstH2I RGCGCY 2 cut(s) 269, 624
BstHHI GCGC 4 cut(s) 268, 416, 623, 676
BstKTI GATC 5 cut(s) 124, 182, 336, 555, 630
BstMAI GTCTC 5 cut(s) 348, 395, 528, 871, 884
BstMBI GATC 5 cut(s) 121, 179, 333, 552, 627
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 4 cut(s) 107, 346, 629, 638
BstNI CCWGG 2 cut(s) 320, 804
BstNSI RCATGY 1 cut(s) 150
BstPI GGTNACC 1 cut(s) 682
BstSCI CCNGG 2 cut(s) 318, 802
BstSLI GKGCMC 1 cut(s) 480
BstUI CGCG 4 cut(s) 340, 414, 632, 882
BstV1I GCAGC 3 cut(s) 610, 653, 972
BstX2I RGATCY 1 cut(s) 333
BstYI RGATCY 1 cut(s) 333
BstZ17I GTATAC 1 cut(s) 510
BsuI GTATCC 1 cut(s) 864
BsuRI GGCC 3 cut(s) 442, 478, 974
BtgI CCRYGG 3 cut(s) 373, 480, 896
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 1 cut(s) 282
BtuMI TCGCGA 1 cut(s) 632
CciI TCATGA 1 cut(s) 982
CfoI GCGC 4 cut(s) 268, 416, 623, 676
Cfr10I RCCGGY 2 cut(s) 150, 605
Cfr13I GGNCC 4 cut(s) 440, 476, 477, 704
CseI GACGC 3 cut(s) 840, 888, 901
Csp6I GTAC 1 cut(s) 79
CspAI ACCGGT 1 cut(s) 605
CviAII CATG 4 cut(s) 147, 481, 538, 983
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 2 cut(s) 764, 932
DpnI GATC 5 cut(s) 123, 181, 335, 554, 629
DpnII GATC 5 cut(s) 121, 179, 333, 552, 627
DraI TTTAAA 1 cut(s) 667
EaeI YGGCCR 1 cut(s) 972
Eam1104I CTCTTC 2 cut(s) 324, 543
EarI CTCTTC 2 cut(s) 324, 543
Ecl136II GAGCTC 1 cut(s) 1026
Eco130I CCWWGG 1 cut(s) 480
Eco24I GRGCYC 2 cut(s) 480, 1028
Eco32I GATATC 1 cut(s) 652
Eco47I GGWCC 1 cut(s) 704
Eco53kI GAGCTC 1 cut(s) 1026
Eco57I CTGAAG 1 cut(s) 498
Eco72I CACGTG 4 cut(s) 387, 710, 978, 1032
Eco88I CYCGRG 1 cut(s) 392
Eco91I GGTNACC 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 1026
EcoO65I GGTNACC 1 cut(s) 682
EcoRII CCWGG 2 cut(s) 318, 802
EcoRV GATATC 1 cut(s) 652
EcoT14I CCWWGG 1 cut(s) 480
EcoT38I GRGCYC 2 cut(s) 480, 1028
ErhI CCWWGG 1 cut(s) 480
Esp3I CGTCTC 3 cut(s) 348, 871, 884
FaeI CATG 4 cut(s) 150, 484, 541, 986
FaiI YATR 7 cut(s) 148, 482, 510, 539, 680, 984, 1068
FaqI GGGAC 2 cut(s) 41, 157
FatI CATG 4 cut(s) 146, 480, 537, 982
FauI CCCGC 1 cut(s) 485
FblI GTMKAC 2 cut(s) 509, 1011
Fnu4HI GCNGC 5 cut(s) 341, 624, 642, 950, 961
FokI GGATG 1 cut(s) 289
FriOI GRGCYC 2 cut(s) 480, 1028
Fsp4HI GCNGC 5 cut(s) 341, 624, 642, 950, 961
FspBI CTAG 2 cut(s) 291, 638
GlaI GCGC 4 cut(s) 267, 415, 622, 675
GluI GCNGC 5 cut(s) 341, 624, 642, 950, 961
GsuI CTGGAG 2 cut(s) 468, 825
HaeII RGCGCY 2 cut(s) 269, 624
HaeIII GGCC 3 cut(s) 442, 478, 974
HapII CCGG 6 cut(s) 61, 76, 151, 183, 198, 606
HgaI GACGC 3 cut(s) 840, 888, 901
HhaI GCGC 4 cut(s) 268, 416, 623, 676
Hin1I GRCGYC 3 cut(s) 357, 786, 893
Hin1II CATG 4 cut(s) 150, 484, 541, 986
Hin6I GCGC 4 cut(s) 266, 414, 621, 674
HinP1I GCGC 4 cut(s) 266, 414, 621, 674
HindIII AAGCTT 1 cut(s) 502
HinfI GANTC 5 cut(s) 70, 95, 424, 768, 944
HpaII CCGG 6 cut(s) 61, 76, 151, 183, 198, 606
HphI GGTGA 1 cut(s) 784
Hpy166II GTNNAC 7 cut(s) 188, 510, 523, 707, 775, 904, 1012
Hpy188I TCNGA 7 cut(s) 159, 701, 716, 732, 781, 1043, 1056
Hpy188III TCNNGA 4 cut(s) 392, 631, 772, 983
Hpy8I GTNNAC 7 cut(s) 188, 510, 523, 707, 775, 904, 1012
Hpy99I CGWCG 6 cut(s) 362, 584, 664, 785, 788, 856
HpyAV CCTTC 5 cut(s) 135, 230, 379, 419, 751
HpyCH4III ACNGT 4 cut(s) 32, 83, 527, 688
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 346, 629, 638
HpyF3I CTNAG 2 cut(s) 764, 932
Hsp92I GRCGYC 3 cut(s) 357, 786, 893
Hsp92II CATG 4 cut(s) 150, 484, 541, 986
HspAI GCGC 4 cut(s) 266, 414, 621, 674
Kzo9I GATC 5 cut(s) 121, 179, 333, 552, 627
LmnI GCTCC 4 cut(s) 162, 449, 922, 1031
Lsp1109I GCAGC 3 cut(s) 610, 653, 972
LweI GCATC 2 cut(s) 713, 972
MaeI CTAG 2 cut(s) 291, 638
MaeIII GTNAC 5 cut(s) 302, 595, 608, 682, 941
MalI GATC 5 cut(s) 123, 181, 335, 554, 629
MbiI CCGCTC 1 cut(s) 492
MboI GATC 5 cut(s) 121, 179, 333, 552, 627
MboII GAAGA 3 cut(s) 226, 341, 560
MflI RGATCY 1 cut(s) 333
MhlI GDGCHC 3 cut(s) 167, 480, 1028
MlsI TGGCCA 1 cut(s) 974
MluCI AATT 2 cut(s) 22, 86
MluI ACGCGT 1 cut(s) 880
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 2 cut(s) 418, 938
MmeI TCCRAC 4 cut(s) 158, 233, 694, 804
MnlI CCTC 5 cut(s) 139, 153, 626, 695, 880
Mox20I TGGCCA 1 cut(s) 974
MscI TGGCCA 1 cut(s) 974
MseI TTAA 5 cut(s) 240, 500, 590, 666, 840
MslI CAYNNNNRTG 1 cut(s) 968
Msp20I TGGCCA 1 cut(s) 974
MspI CCGG 6 cut(s) 61, 76, 151, 183, 198, 606
MspR9I CCNGG 2 cut(s) 320, 804
MssI GTTTAAAC 1 cut(s) 667
MvaI CCWGG 2 cut(s) 320, 804
MvnI CGCG 4 cut(s) 340, 414, 632, 882
MwoI GCNNNNNNNGC 4 cut(s) 107, 346, 629, 638
NcoI CCATGG 1 cut(s) 480
NdeII GATC 5 cut(s) 121, 179, 333, 552, 627
NlaIII CATG 4 cut(s) 150, 484, 541, 986
NlaIV GGNNCC 2 cut(s) 379, 478
NmeAIII GCCGAG 2 cut(s) 597, 888
NmuCI GTSAC 2 cut(s) 608, 941
NruI TCGCGA 1 cut(s) 632
NspI RCATGY 1 cut(s) 150
PaeR7I CTCGAG 1 cut(s) 392
PagI TCATGA 1 cut(s) 982
PcsI WCGNNNNNNNCGW 2 cut(s) 777, 860
PfeI GAWTC 3 cut(s) 70, 95, 768
PflFI GACNNNGTC 3 cut(s) 359, 785, 850
PfoI TCCNGGA 1 cut(s) 802
PinAI ACCGGT 1 cut(s) 605
PkrI GCNGC 5 cut(s) 342, 625, 643, 951, 962
Ple19I CGATCG 1 cut(s) 630
PleI GAGTC 2 cut(s) 418, 938
PmaCI CACGTG 4 cut(s) 387, 710, 978, 1032
PmeI GTTTAAAC 1 cut(s) 667
PmlI CACGTG 4 cut(s) 387, 710, 978, 1032
PpsI GAGTC 2 cut(s) 418, 938
Ppu21I YACGTR 5 cut(s) 307, 387, 710, 978, 1032
Psp124BI GAGCTC 1 cut(s) 1028
Psp1406I AACGTT 1 cut(s) 837
Psp6I CCWGG 2 cut(s) 318, 802
PspCI CACGTG 4 cut(s) 387, 710, 978, 1032
PspEI GGTNACC 1 cut(s) 682
PspGI CCWGG 2 cut(s) 318, 802
PspN4I GGNNCC 2 cut(s) 379, 478
PspOMI GGGCCC 1 cut(s) 476
PspPI GGNCC 4 cut(s) 440, 476, 477, 704
PsuI RGATCY 1 cut(s) 333
PsyI GACNNNGTC 3 cut(s) 359, 785, 850
PvuI CGATCG 1 cut(s) 630
RgaI GCGATCGC 1 cut(s) 630
RruI TCGCGA 1 cut(s) 632
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
RseI CAYNNNNRTG 1 cut(s) 968
SacI GAGCTC 1 cut(s) 1028
SaqAI TTAA 5 cut(s) 240, 500, 590, 666, 840
SatI GCNGC 5 cut(s) 341, 624, 642, 950, 961
Sau3AI GATC 5 cut(s) 121, 179, 333, 552, 627
Sau96I GGNCC 4 cut(s) 440, 476, 477, 704
SchI GAGTC 2 cut(s) 418, 938
ScrFI CCNGG 2 cut(s) 320, 804
SduI GDGCHC 3 cut(s) 167, 480, 1028
SfaAI GCGATCGC 1 cut(s) 630
SfaNI GCATC 2 cut(s) 713, 972
Sfr274I CTCGAG 1 cut(s) 392
SgfI GCGATCGC 1 cut(s) 630
SinI GGWCC 1 cut(s) 704
SlaI CTCGAG 1 cut(s) 392
SmiMI CAYNNNNRTG 1 cut(s) 968
SmlI CTYRAG 3 cut(s) 392, 740, 955
SmoI CTYRAG 3 cut(s) 392, 740, 955
Sse9I AATT 2 cut(s) 22, 86
SsiI CCGC 4 cut(s) 340, 381, 492, 950
SspMI CTAG 2 cut(s) 291, 638
SstI GAGCTC 1 cut(s) 1028
StyD4I CCNGG 2 cut(s) 318, 802
StyI CCWWGG 1 cut(s) 480
TaaI ACNGT 4 cut(s) 32, 83, 527, 688
TaqI TCGA 5 cut(s) 93, 120, 205, 393, 854
TasI AATT 2 cut(s) 22, 86
TauI GCSGC 2 cut(s) 343, 952
TfiI GAWTC 3 cut(s) 70, 95, 768
Tru1I TTAA 5 cut(s) 240, 500, 590, 666, 840
Tru9I TTAA 5 cut(s) 240, 500, 590, 666, 840
TseFI GTSAC 2 cut(s) 608, 941
TseI GCWGC 3 cut(s) 623, 641, 960
Tsp45I GTSAC 2 cut(s) 608, 941
TspGWI ACGGA 1 cut(s) 362
Tth111I GACNNNGTC 3 cut(s) 359, 785, 850
VpaK11BI GGWCC 1 cut(s) 704
XceI RCATGY 1 cut(s) 150
XhoI CTCGAG 1 cut(s) 392
XmiI GTMKAC 2 cut(s) 509, 1011
XspI CTAG 2 cut(s) 291, 638
ZraI GACGTC 2 cut(s) 358, 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.