AT3G09030

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
2754668 .. 2756512
1845 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09030.1

Sequence Viewer

Length: 1383 bp
ATGGTGGTTTCCGATGGCGGCAAACGAGTGAAGCTCAACGTCGGCGGCGAGATCTTCGAAACCAACGCGTCGACCATTCAATCATCTTGCCCAGACTCTCTCCTCGCAGCTCTATCGACTTCAACCTCCCATGGATCGAATCCGGTTTTCATCGATCGTGACCCGGAGATTTTCGCCGTCATTCTCAATCTCCTCCGTACTGGTCGACTCCCAGCTAATTCCTCCGGCGTTTTTTCCAAGCAAGAGCTACTAGATGAGGCTATGTATTACGGCGTCGAATCACTCCTCAGATTGGCGATGTTACCGCCGCCGCTGCTAGGTTTCGATGCGTCTCTTGTCTCCACAATCGTACCGGCTGCTGATGGAGTCCCGTCTGCTTTAACCGCTACTGCTGGAGACGCCTCTCTGTGGATCGCTCACGGTGGTCAGATCTCCGTCTACGATTGGAGTCTTTCCCATGCTGGAACCGTCCGTACACATCTCAACGATATCACATCGATCTGCCGTGTCTGGGGCGAAGCTGCTGCAATTGGATCTGGATCCGCGTCGGGACTTCATTTCTACGATCTCTCTGGAGGTCGATACATCGGATCTACGCACTGGACGGATCCGGAAGATCCGAGGATCCATAAGGCACGCGTCGCCGCCGTTGCTGATTCGGAAGGTGGAGTATTCGCATCCTTTGATTGCCTGCACAGAGAGAACAGTGTTCTCCAGATCGACAAATCCACTCTTCAAGTCGCCGCCGTGATCGGTCAGCAATCTGGAAACTCGGCTAAAACCACAGTACCGGAGAAACTCCGGTGGCTGCCAGCGAAAGGTCTTTTGGTGGGATCAGCCGTTCAACGTGGAGTGTTTGGTTGCTCTGGCTACATCCGGATTTGGGACCCAAGGTCCAGGAACATCGTATGGGAAACGAACGAGCCAGGATCGGGACGAAGCACTAGGTTTGGAGACGCCTTAGCTGATATGGACGTGGACGTTGAAGACTCGATCCTTTTCAAGGTATGTTCCAAGTCAGGAGACCTCGGAATGGCAGACATTCGTAAATTAGGTGAAGATCCATGGGTATATATGTCAGACGAGAATCCCGGTGCCTGGAAAGCCGGCGACGGAGGTGGTTACAGCGTGGTACATTGTTACAGAAAGCAAGTGTTGGCCGCCAGAGGTGGTGCATTAGAGGTATGGTCAAGTGTTAAGGAGAAGACAAGTGGTGATCCAATTCGCAGGAGAAACTTTGTAGACAAGGAAGATGATTCCAAGAGAGGGATGATTTCGAAAATTGAAGCAGGAGGTGACCGGCTCTTTGTTTCTCGGGAATGTATGGAAGGTGTGGAGGTCTGGGAAACTTCTAGTTTCTCCGGTGTGGTATCCGTCGAGTAA

Protein Analysis

460

Amino Acids

49.28

Weight (kDa)

5.33

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB_2 PF02214 10 - 95 7.5e-16 BTB/POZ domain
Beta_prop_At2g24240 PF25279 132 - 450 2e-17 At2g24240-like, C-terminal beta propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1094
AccI GTMKAC 4 cut(s) 71, 205, 438, 1242
AccII CGCG 3 cut(s) 68, 545, 639
AccIII TCCGGA 2 cut(s) 610, 876
AcoI YGGCCR 1 cut(s) 1158
AcyI GRCGYC 3 cut(s) 273, 399, 957
AfaI GTAC 5 cut(s) 199, 351, 475, 789, 1134
AflIII ACRYGT 2 cut(s) 66, 637
AgsI TTSAA 7 cut(s) 80, 123, 737, 845, 986, 1003, 1286
AhdI GACNNNNNGTC 1 cut(s) 892
AjiI CACGTC 1 cut(s) 976
AjnI CCWGG 3 cut(s) 896, 925, 1097
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AloI GAACNNNNNNTCC 2 cut(s) 825, 857
AluBI AGCT 6 cut(s) 34, 110, 215, 247, 521, 965
AluI AGCT 6 cut(s) 34, 110, 215, 247, 521, 965
Alw26I GTCTC 5 cut(s) 336, 343, 390, 948, 1017
Ama87I CYCGRG 1 cut(s) 1314
Aor13HI TCCGGA 2 cut(s) 610, 876
AoxI GGCC 1 cut(s) 1158
ApeKI GCWGC 6 cut(s) 107, 313, 356, 521, 524, 808
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
AspS9I GGNCC 2 cut(s) 886, 894
AsuC2I CCSGG 2 cut(s) 164, 1092
AsuHPI GGTGA 3 cut(s) 1067, 1226, 1307
AsuII TTCGAA 2 cut(s) 57, 1277
AvaI CYCGRG 1 cut(s) 1314
AvaII GGWCC 2 cut(s) 886, 894
BaeI ACNNNNGTAYC 4 cut(s) 333, 366, 771, 804
BamHI GGATCC 3 cut(s) 539, 607, 624
BanI GGYRCC 1 cut(s) 1094
BbsI GAAGAC 2 cut(s) 993, 1211
BbvI GCAGC 6 cut(s) 119, 300, 343, 508, 511, 795
BccI CCATC 2 cut(s) 8, 356
BceAI ACGGC 6 cut(s) 161, 286, 489, 632, 731, 824
BcgI CGANNNNNNTGC 4 cut(s) 96, 130, 506, 540
BciT130I CCWGG 3 cut(s) 898, 927, 1099
BciVI GTATCC 1 cut(s) 1381
BcnI CCSGG 2 cut(s) 164, 1092
BcoDI GTCTC 5 cut(s) 336, 343, 390, 948, 1017
BfaI CTAG 4 cut(s) 251, 317, 945, 1353
BfuI GTATCC 1 cut(s) 1381
BglII AGATCT 2 cut(s) 51, 429
Bme1390I CCNGG 5 cut(s) 164, 898, 927, 1092, 1099
Bme18I GGWCC 2 cut(s) 886, 894
BmeRI GACNNNNNGTC 1 cut(s) 892
BmeT110I CYCGRG 1 cut(s) 1314
BmgBI CACGTC 1 cut(s) 976
BmgT120I GGNCC 2 cut(s) 886, 894
BmiI GGNNCC 7 cut(s) 466, 541, 609, 626, 887, 888, 1096
BmrFI CCNGG 5 cut(s) 164, 898, 927, 1092, 1099
BmsI GCATC 2 cut(s) 316, 686
BpiI GAAGAC 2 cut(s) 993, 1211
BplI GAGNNNNNCTC 2 cut(s) 18, 50
BpmI CTGGAG 3 cut(s) 414, 594, 698
Bpu10I CCTNAGC 1 cut(s) 961
Bpu14I TTCGAA 2 cut(s) 57, 1277
BpuMI CCSGG 2 cut(s) 164, 1092
Bsa29I ATCGAT 2 cut(s) 153, 497
BsaBI GATNNNNATC 1 cut(s) 538
BsaHI GRCGYC 3 cut(s) 273, 399, 957
BsaI GGTCTC 1 cut(s) 1017
BsaJI CCNNGG 5 cut(s) 130, 620, 890, 1027, 1064
BsaWI WCCGGW 6 cut(s) 142, 610, 790, 801, 876, 1361
Bse118I RCCGGY 3 cut(s) 352, 1106, 1299
Bse1I ACTGG 2 cut(s) 205, 605
Bse8I GATNNNNATC 1 cut(s) 538
BseAI TCCGGA 2 cut(s) 610, 876
BseBI CCWGG 3 cut(s) 898, 927, 1099
BseCI ATCGAT 2 cut(s) 153, 497
BseDI CCNNGG 5 cut(s) 130, 620, 890, 1027, 1064
BseGI GGATG 3 cut(s) 677, 873, 1275
BseJI GATNNNNATC 1 cut(s) 538
BseMII CTCAG 1 cut(s) 301
BseNI ACTGG 2 cut(s) 205, 605
BseRI GAGGAG 3 cut(s) 92, 182, 275
BseXI GCAGC 6 cut(s) 119, 300, 343, 508, 511, 795
BseYI CCCAGC 1 cut(s) 211
BsgI GTGCAG 1 cut(s) 677
Bsh1236I CGCG 3 cut(s) 68, 545, 639
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 1 cut(s) 1160
BshNI GGYRCC 1 cut(s) 1094
BshVI ATCGAT 2 cut(s) 153, 497
BsiEI CGRYCG 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 1314
BslFI GGGAC 4 cut(s) 353, 564, 899, 948
BsmAI GTCTC 5 cut(s) 336, 343, 390, 948, 1017
BsmBI CGTCTC 3 cut(s) 336, 390, 948
BsmFI GGGAC 4 cut(s) 353, 564, 899, 948
BsnI GGCC 1 cut(s) 1160
Bso31I GGTCTC 1 cut(s) 1017
BsoBI CYCGRG 1 cut(s) 1314
Bsp119I TTCGAA 2 cut(s) 57, 1277
Bsp13I TCCGGA 2 cut(s) 610, 876
Bsp19I CCATGG 2 cut(s) 130, 1064
BspANI GGCC 1 cut(s) 1160
BspCNI CTCAG 1 cut(s) 300
BspDI ATCGAT 2 cut(s) 153, 497
BspEI TCCGGA 2 cut(s) 610, 876
BspFNI CGCG 3 cut(s) 68, 545, 639
BspLI GGNNCC 7 cut(s) 466, 541, 609, 626, 887, 888, 1096
BspT104I TTCGAA 2 cut(s) 57, 1277
BspT107I GGYRCC 1 cut(s) 1094
BspTNI GGTCTC 1 cut(s) 1017
BsrFI RCCGGY 3 cut(s) 352, 1106, 1299
BsrI ACTGG 2 cut(s) 205, 605
BssAI RCCGGY 3 cut(s) 352, 1106, 1299
BssECI CCNNGG 5 cut(s) 130, 620, 890, 1027, 1064
BssNI GRCGYC 3 cut(s) 273, 399, 957
BssT1I CCWWGG 3 cut(s) 130, 890, 1064
Bst2UI CCWGG 3 cut(s) 898, 927, 1099
Bst4CI ACNGT 4 cut(s) 422, 469, 707, 787
Bst6I CTCTTC 1 cut(s) 738
BstACI GRCGYC 3 cut(s) 273, 399, 957
BstBI TTCGAA 2 cut(s) 57, 1277
BstC8I GCNNGC 4 cut(s) 637, 692, 813, 1108
BstDEI CTNAG 2 cut(s) 287, 961
BstDSI CCRYGG 2 cut(s) 130, 1064
BstEII GGTNACC 1 cut(s) 1295
BstENI CCTNNNNNAGG 1 cut(s) 1001
BstF5I GGATG 3 cut(s) 677, 873, 1275
BstFNI CGCG 3 cut(s) 68, 545, 639
BstMAI GTCTC 5 cut(s) 336, 343, 390, 948, 1017
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 6 cut(s) 313, 383, 398, 641, 650, 1103
BstNI CCWGG 3 cut(s) 898, 927, 1099
BstPI GGTNACC 1 cut(s) 1295
BstSCI CCNGG 5 cut(s) 162, 896, 925, 1090, 1097
BstUI CGCG 3 cut(s) 68, 545, 639
BstV1I GCAGC 6 cut(s) 119, 300, 343, 508, 511, 795
BstV2I GAAGAC 2 cut(s) 993, 1211
BstX2I RGATCY 9 cut(s) 51, 429, 533, 539, 590, 607, 616, 624, 1060
BstYI RGATCY 9 cut(s) 51, 429, 533, 539, 590, 607, 616, 624, 1060
Bsu15I ATCGAT 2 cut(s) 153, 497
BsuI GTATCC 1 cut(s) 1381
BsuRI GGCC 1 cut(s) 1160
BsuTUI ATCGAT 2 cut(s) 153, 497
BtgI CCRYGG 2 cut(s) 130, 1064
BtgZI GCGATG 1 cut(s) 311
BtrI CACGTC 1 cut(s) 976
BtsCI GGATG 3 cut(s) 677, 873, 1275
BtsIMutI CAGTG 2 cut(s) 598, 712
Cac8I GCNNGC 4 cut(s) 637, 692, 813, 1108
Cfr10I RCCGGY 3 cut(s) 352, 1106, 1299
Cfr13I GGNCC 2 cut(s) 886, 894
ClaI ATCGAT 2 cut(s) 153, 497
CseI GACGC 7 cut(s) 57, 262, 318, 407, 534, 628, 965
Csp6I GTAC 5 cut(s) 198, 350, 474, 788, 1133
CviAII CATG 3 cut(s) 131, 458, 1065
CviQI GTAC 5 cut(s) 198, 350, 474, 788, 1133
DdeI CTNAG 2 cut(s) 287, 961
DriI GACNNNNNGTC 1 cut(s) 892
EaeI YGGCCR 1 cut(s) 1158
Eam1104I CTCTTC 1 cut(s) 738
Eam1105I GACNNNNNGTC 1 cut(s) 892
EarI CTCTTC 1 cut(s) 738
Eco130I CCWWGG 3 cut(s) 130, 890, 1064
Eco31I GGTCTC 1 cut(s) 1017
Eco32I GATATC 1 cut(s) 490
Eco47I GGWCC 2 cut(s) 886, 894
Eco88I CYCGRG 1 cut(s) 1314
Eco91I GGTNACC 1 cut(s) 1295
EcoNI CCTNNNNNAGG 1 cut(s) 1001
EcoO109I RGGNCCY 1 cut(s) 886
EcoO65I GGTNACC 1 cut(s) 1295
EcoRII CCWGG 3 cut(s) 896, 925, 1097
EcoRV GATATC 1 cut(s) 490
EcoT14I CCWWGG 3 cut(s) 130, 890, 1064
ErhI CCWWGG 3 cut(s) 130, 890, 1064
Esp3I CGTCTC 3 cut(s) 336, 390, 948
FaeI CATG 3 cut(s) 134, 461, 1068
FaqI GGGAC 4 cut(s) 353, 564, 899, 948
FatI CATG 3 cut(s) 130, 457, 1064
FblI GTMKAC 4 cut(s) 71, 205, 438, 1242
FokI GGATG 3 cut(s) 664, 860, 1282
FspBI CTAG 4 cut(s) 251, 317, 945, 1353
GsaI CCCAGC 1 cut(s) 215
GsuI CTGGAG 3 cut(s) 414, 594, 698
HaeIII GGCC 1 cut(s) 1160
HgaI GACGC 7 cut(s) 57, 262, 318, 407, 534, 628, 965
Hin1I GRCGYC 3 cut(s) 273, 399, 957
Hin1II CATG 3 cut(s) 134, 461, 1068
HincII GTYRAC 2 cut(s) 72, 206
HindII GTYRAC 2 cut(s) 72, 206
HphI GGTGA 3 cut(s) 1067, 1226, 1307
Hpy166II GTNNAC 6 cut(s) 72, 206, 439, 476, 979, 1243
Hpy188I TCNGA 8 cut(s) 13, 290, 429, 590, 621, 661, 1031, 1081
Hpy8I GTNNAC 6 cut(s) 72, 206, 439, 476, 979, 1243
Hpy99I CGWCG 7 cut(s) 44, 73, 278, 550, 644, 1115, 1379
HpyAV CCTTC 2 cut(s) 656, 1322
HpyCH4III ACNGT 4 cut(s) 422, 469, 707, 787
HpyCH4IV ACGT 4 cut(s) 39, 847, 975, 981
HpyCH4V TGCA 3 cut(s) 527, 694, 1175
HpyF10VI GCNNNNNNNGC 6 cut(s) 313, 383, 398, 641, 650, 1103
HpyF3I CTNAG 2 cut(s) 287, 961
HpySE526I ACGT 4 cut(s) 39, 847, 975, 981
Hsp92I GRCGYC 3 cut(s) 273, 399, 957
Hsp92II CATG 3 cut(s) 134, 461, 1068
KflI GGGWCCC 1 cut(s) 886
Kpn2I TCCGGA 2 cut(s) 610, 876
KroI GCCGGC 1 cut(s) 1106
KroNI GCCGGC 1 cut(s) 1108
Lsp1109I GCAGC 6 cut(s) 119, 300, 343, 508, 511, 795
LweI GCATC 2 cut(s) 316, 686
MaeI CTAG 4 cut(s) 251, 317, 945, 1353
MaeII ACGT 4 cut(s) 39, 847, 975, 981
MaeIII GTNAC 5 cut(s) 158, 300, 1121, 1139, 1295
MboII GAAGA 7 cut(s) 46, 626, 725, 998, 1070, 1216, 1262
MfeI CAATTG 1 cut(s) 528
MflI RGATCY 9 cut(s) 51, 429, 533, 539, 590, 607, 616, 624, 1060
MluCI AATT 5 cut(s) 217, 528, 1049, 1221, 1281
MluI ACGCGT 2 cut(s) 66, 637
MlyI GAGTC 5 cut(s) 89, 201, 375, 457, 983
MroI TCCGGA 2 cut(s) 610, 876
MroNI GCCGGC 1 cut(s) 1106
MseI TTAA 2 cut(s) 380, 1197
MspA1I CMGCKG 1 cut(s) 313
MspR9I CCNGG 5 cut(s) 164, 898, 927, 1092, 1099
MunI CAATTG 1 cut(s) 528
MvaI CCWGG 3 cut(s) 898, 927, 1099
MvnI CGCG 3 cut(s) 68, 545, 639
MwoI GCNNNNNNNGC 6 cut(s) 313, 383, 398, 641, 650, 1103
NaeI GCCGGC 1 cut(s) 1108
NciI CCSGG 2 cut(s) 164, 1092
NcoI CCATGG 2 cut(s) 130, 1064
NgoMIV GCCGGC 1 cut(s) 1106
NlaIII CATG 3 cut(s) 134, 461, 1068
NlaIV GGNNCC 7 cut(s) 466, 541, 609, 626, 887, 888, 1096
NmeAIII GCCGAG 1 cut(s) 752
NmuCI GTSAC 2 cut(s) 158, 1295
NspV TTCGAA 2 cut(s) 57, 1277
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PdiI GCCGGC 1 cut(s) 1108
PfeI GAWTC 5 cut(s) 139, 278, 656, 1087, 1256
PfoI TCCNGGA 1 cut(s) 896
Ple19I CGATCG 1 cut(s) 157
PleI GAGTC 5 cut(s) 89, 201, 374, 456, 983
PpsI GAGTC 5 cut(s) 89, 201, 374, 456, 983
PpuMI RGGWCCY 1 cut(s) 886
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 3 cut(s) 896, 925, 1097
PspEI GGTNACC 1 cut(s) 1295
PspFI CCCAGC 1 cut(s) 211
PspGI CCWGG 3 cut(s) 896, 925, 1097
PspN4I GGNNCC 7 cut(s) 466, 541, 609, 626, 887, 888, 1096
PspPI GGNCC 2 cut(s) 886, 894
PspPPI RGGWCCY 1 cut(s) 886
PsrI GAACNNNNNNTAC 2 cut(s) 457, 489
PsuI RGATCY 9 cut(s) 51, 429, 533, 539, 590, 607, 616, 624, 1060
PvuI CGATCG 1 cut(s) 157
RsaI GTAC 5 cut(s) 199, 351, 475, 789, 1134
RsaNI GTAC 5 cut(s) 198, 350, 474, 788, 1133
SalI GTCGAC 2 cut(s) 70, 204
SaqAI TTAA 2 cut(s) 380, 1197
Sau96I GGNCC 2 cut(s) 886, 894
SchI GAGTC 5 cut(s) 89, 201, 375, 457, 983
ScrFI CCNGG 5 cut(s) 164, 898, 927, 1092, 1099
SfaNI GCATC 2 cut(s) 316, 686
SfuI TTCGAA 2 cut(s) 57, 1277
SinI GGWCC 2 cut(s) 886, 894
Sse9I AATT 5 cut(s) 217, 528, 1049, 1221, 1281
SspMI CTAG 4 cut(s) 251, 317, 945, 1353
StyD4I CCNGG 5 cut(s) 162, 896, 925, 1090, 1097
StyI CCWWGG 3 cut(s) 130, 890, 1064
TaaI ACNGT 4 cut(s) 422, 469, 707, 787
TaiI ACGT 4 cut(s) 42, 850, 978, 984
TaqII GACCGA 1 cut(s) 743
TasI AATT 5 cut(s) 217, 528, 1049, 1221, 1281
TauI GCSGC 7 cut(s) 21, 48, 310, 313, 647, 746, 1163
TfiI GAWTC 5 cut(s) 139, 278, 656, 1087, 1256
Tru1I TTAA 2 cut(s) 380, 1197
Tru9I TTAA 2 cut(s) 380, 1197
TscAI CASTG 2 cut(s) 605, 712
TseFI GTSAC 2 cut(s) 158, 1295
TseI GCWGC 6 cut(s) 107, 313, 356, 521, 524, 808
Tsp45I GTSAC 2 cut(s) 158, 1295
TspDTI ATGAA 2 cut(s) 139, 545
TspGWI ACGGA 6 cut(s) 185, 424, 461, 620, 1128, 1363
TspRI CASTG 2 cut(s) 605, 712
VpaK11BI GGWCC 2 cut(s) 886, 894
XagI CCTNNNNNAGG 1 cut(s) 1001
XmiI GTMKAC 4 cut(s) 71, 205, 438, 1242
XspI CTAG 4 cut(s) 251, 317, 945, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.