Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0009361

Physical Location & Seq

Genomic Coordinates Forward (+)

11002449 .. 11007733

Gene Structure 5285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG128800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGAAAACGGTTACCACCACACAGCCACCGGCCCTCGCTCCGACGACCGTATCAAGCTCAACGTCGGAGGCAAGCTCTTCGAAACTACCTTATCGACAATCCAGGCAGGCGGTCCCGACTCTCTCTTAGCCGCCCTCTCGAGCCGGACATCCGACGACCCGGACCCGGTTTTCATAGACCGGGACCCGGAGATCTTCTCAGTCATACTCTCTCTCCTCCGCTCCGACGGTCTCCCTTCCACGGCTCGCCGATTCGCCAAGCAAGAACTCGCCGATGAAGCTCTCTACTACGGCATCGAGTCGCAGCTCAAGTCGGCGATGTTGCCGCCTCCGTTGTCAGGAATCGACGCCTCGATCGTCACAACTGTACAGCCCGCCTCCGACGGCCTCCCCTCGGCGATCACAGCCGGTACCGACGGCTCCGTTTGGATCGCACACGGCGGTCAAATATCCAGCTACGATTGGAATCTGTGCCACGCCGGAACGATCCGTACTCATTTGGAGGACATAAACTCGATTTGCCGAGTGTATCCTGAAATCGCCGCCGTAGGATCCGAATCCGACCCGGGACTCCACTTCTACGACTTCTCCGGCGTGCGAAACATGGGGTCGATCCACTGGACCGACCCGGCCGACCCGAGAATCTTCAAGGCCCGAGTTACCTCCATCTCGAACTCGCCGAGCTCAGTCTTCGCCGCTTTCGATTGCCCGCACAGAGAGAACTGCATCTTAGTGATCGACAAATCAACGCTCAAGATCGTCGGTGAGCTGAGCAGGCAATCCGGAAGCTCGGCGAAGAACTTGGCCGTCGGAAAGCTGACGTGGCTGCCTGAAACGGGCTTGATTGTTGGGAGCTCCGTCACTTGCGGTGCGTTCGGGTACTCGGGTTATATCCGAATGTGGGACCCGAGGTCCAAGGAGGTGGTTTGGGAGACGAACGAGCCGGGGTCGGGGCGGAGCAGTAGGTTCGGGGACTCCTTTGCGGACGTCGACGTGGACATTGAGGAGTCGACTCTGTTCAAGGTGTGTTCAAAGTCTGGAGATTTGGCAATAGCAGACCTGCGTAATTTAGGGGATGATCCGTGGGTTTATTTACAAGATAAGGACCCAAGCATGAGGAACATTAAGGGGGGTGGCAATAGCAGTAGTGTAATTCACTGTTACAAAAACCAAGCCTTTGTGGGCAGAGATGGTGCCTTGGAGGTTTGGTCTAGACTGCCGAGAGCCGAAAATAGGGTGGATAGAGAAAGTGAGGTTTGCGAGGGATTGTATAGGAGGAATTTTGTGGATAAAGAGGAGGATGCTCAGAGAGGGATTATAAAGAAAATCGAAGGCGGTGGGAATAGACTGTTTGTTGTTAGAGAAGATGTTGAAGGTATTGAGGTGTGGGAGAGCTCTCGTTCTTCTGGTGCAGTTTCAGTTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0015031 GO:0015833 GO:0033036 GO:0034613 GO:0042886 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB_2

Protein Analysis

475

Amino Acids

51.66

Weight (kDa)

5.06

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB_2	PF02214	18 - 102	5e-14	BTB/POZ domain
Beta_prop_At2g24240	PF25279	131 - 464	1.4e-18	At2g24240-like, C-terminal beta propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09030
fragaria_vesca	FvH4_6g11860
malus_domestica	MD04G1148400.v1.1 MD12G1162000.v1.1
prunus_persica	Prupe.6G272700_v2.0.a1
pyrus_communis	pycom12g15380
rosa_chinensis	RchiOBHm_Chr3g0463601
rosa_laevigata	RLG00000024769
rosa_multiflora	Rmu_sc0003267.1_g000022 Rmu_sc0012012.1_g000004 Rmu_sc0019822.1_g000002
rosa_roxburghii	Rroxscaffold_6G00416400
rosa_rugosa	Rorug03G0066200 Rorug03G0066300 Rorug03G0066400 Rorug03G0066400 Rorug03G0066500
rosa_samantha	Rh3AG123300 Rh3BG128200 Rh3CG130000 Rh3DG128800
rosa_wichuraiana	Rw3G010430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1319
AatII	GACGTC	1 cut(s)	990
Acc36I	ACCTGC	1 cut(s)	1068
Acc65I	GGTACC	1 cut(s)	410
AccB1I	GGYRCC	2 cut(s)	410, 1193
AccBSI	CCGCTC	1 cut(s)	222
AccI	GTMKAC	2 cut(s)	990, 1010
AccIII	TCCGGA	1 cut(s)	782
AclWI	GGATC	6 cut(s)	437, 481, 546, 559, 607, 1073
AcoI	YGGCCR	2 cut(s)	630, 804
AcsI	RAATTY	1 cut(s)	1279
AcyI	GRCGYC	2 cut(s)	348, 987
AfaI	GTAC	4 cut(s)	369, 412, 493, 881
AfiI	CCNNNNNNNGG	9 cut(s)	166, 187, 241, 338, 394, 836, 901, 950, 1233
AgsI	TTSAA	4 cut(s)	649, 1021, 1032, 1373
AhdI	GACNNNNNGTC	1 cut(s)	910
AjiI	CACGTC	2 cut(s)	822, 994
AjnI	CCWGG	1 cut(s)	102
Alw21I	GWGCWC	3 cut(s)	686, 857, 1397
Alw26I	GTCTC	2 cut(s)	236, 926
AlwI	GGATC	6 cut(s)	437, 481, 546, 559, 607, 1073
Ama87I	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
Aor13HI	TCCGGA	1 cut(s)	782
AoxI	GGCC	5 cut(s)	31, 385, 630, 651, 804
ApeKI	GCWGC	2 cut(s)	304, 826
ApoI	RAATTY	1 cut(s)	1279
Asp718I	GGTACC	1 cut(s)	410
AspS9I	GGNCC	9 cut(s)	32, 113, 163, 184, 621, 652, 904, 912, 1105
AsuC2I	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 945
AsuHPI	GGTGA	1 cut(s)	776
AsuII	TTCGAA	1 cut(s)	81
AvaI	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
AvaII	GGWCC	7 cut(s)	113, 163, 184, 621, 904, 912, 1105
BaeI	ACNNNNGTAYC	4 cut(s)	34, 67, 871, 904
BamHI	GGATCC	1 cut(s)	551
BanI	GGYRCC	2 cut(s)	410, 1193
BanII	GRGCYC	3 cut(s)	686, 857, 1397
BbsI	GAAGAC	1 cut(s)	682
Bbv12I	GWGCWC	3 cut(s)	686, 857, 1397
BbvI	GCAGC	2 cut(s)	316, 813
BccI	CCATC	2 cut(s)	674, 1184
BceAI	ACGGC	7 cut(s)	258, 307, 400, 433, 454, 530, 791
BcgI	CGANNNNNNTGC	4 cut(s)	61, 95, 949, 983
BciT130I	CCWGG	1 cut(s)	104
BciVI	GTATCC	1 cut(s)	540
BcnI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 945
BcoDI	GTCTC	2 cut(s)	236, 926
BfaI	CTAG	1 cut(s)	1212
BfuAI	ACCTGC	1 cut(s)	1068
BfuI	GTATCC	1 cut(s)	540
BglII	AGATCT	1 cut(s)	192
BisI	GCNGC	6 cut(s)	132, 305, 326, 543, 696, 827
BlpI	GCTNAGC	1 cut(s)	770
BlsI	GCNGC	6 cut(s)	133, 306, 327, 544, 697, 828
Bme1390I	CCNGG	9 cut(s)	104, 161, 167, 182, 188, 566, 567, 629, 945
Bme18I	GGWCC	7 cut(s)	113, 163, 184, 621, 904, 912, 1105
BmeRI	GACNNNNNGTC	1 cut(s)	910
BmeT110I	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
BmgBI	CACGTC	2 cut(s)	822, 994
BmgT120I	GGNCC	9 cut(s)	32, 113, 163, 184, 621, 652, 904, 912, 1105
BmrFI	CCNGG	9 cut(s)	104, 161, 167, 182, 188, 566, 567, 629, 945
BmsI	GCATC	3 cut(s)	303, 735, 1291
BpiI	GAAGAC	1 cut(s)	682
BplI	GAGNNNNNCTC	4 cut(s)	60, 92, 182, 214
BpmI	CTGGAG	1 cut(s)	1059
Bpu1102I	GCTNAGC	1 cut(s)	770
Bpu14I	TTCGAA	1 cut(s)	81
BpuEI	CTTGAG	2 cut(s)	293, 737
BpuMI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 945
BsaBI	GATNNNNATC	2 cut(s)	465, 556
BsaHI	GRCGYC	2 cut(s)	348, 987
BsaI	GGTCTC	1 cut(s)	236
BsaJI	CCNNGG	8 cut(s)	240, 393, 565, 908, 915, 944, 1082, 1197
BsaWI	WCCGGW	1 cut(s)	782
BsaXI	ACNNNNNCTCC	6 cut(s)	198, 228, 572, 602, 1193, 1223
Bsc4I	CCNNNNNNNGG	9 cut(s)	166, 187, 241, 338, 394, 836, 901, 950, 1233
Bse118I	RCCGGY	2 cut(s)	29, 407
Bse1I	ACTGG	1 cut(s)	623
Bse8I	GATNNNNATC	2 cut(s)	465, 556
BseAI	TCCGGA	1 cut(s)	782
BseBI	CCWGG	1 cut(s)	104
BseDI	CCNNGG	8 cut(s)	240, 393, 565, 908, 915, 944, 1082, 1197
BseGI	GGATG	3 cut(s)	149, 1081, 1306
BseJI	GATNNNNATC	2 cut(s)	465, 556
BseLI	CCNNNNNNNGG	9 cut(s)	166, 187, 241, 338, 394, 836, 901, 950, 1233
BseMII	CTCAG	4 cut(s)	213, 699, 761, 1319
BseNI	ACTGG	1 cut(s)	623
BseRI	GAGGAG	3 cut(s)	206, 1019, 1310
BseX3I	CGGCCG	1 cut(s)	630
BseXI	GCAGC	2 cut(s)	316, 813
Bsh1285I	CGRYCG	3 cut(s)	49, 357, 633
BshFI	GGCC	5 cut(s)	33, 387, 632, 653, 806
BshNI	GGYRCC	2 cut(s)	410, 1193
BsiEI	CGRYCG	3 cut(s)	49, 357, 633
BsiHKAI	GWGCWC	3 cut(s)	686, 857, 1397
BsiHKCI	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
BslFI	GGGAC	5 cut(s)	99, 197, 582, 917, 986
BslI	CCNNNNNNNGG	9 cut(s)	166, 187, 241, 338, 394, 836, 901, 950, 1233
BsmAI	GTCTC	2 cut(s)	236, 926
BsmBI	CGTCTC	1 cut(s)	926
BsmFI	GGGAC	5 cut(s)	99, 197, 582, 917, 986
BsnI	GGCC	5 cut(s)	33, 387, 632, 653, 806
Bso31I	GGTCTC	1 cut(s)	236
BsoBI	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
Bsp119I	TTCGAA	1 cut(s)	81
Bsp1286I	GDGCHC	3 cut(s)	686, 857, 1397
Bsp13I	TCCGGA	1 cut(s)	782
Bsp1407I	TGTACA	1 cut(s)	367
Bsp1720I	GCTNAGC	1 cut(s)	770
BspANI	GGCC	5 cut(s)	33, 387, 632, 653, 806
BspCNI	CTCAG	4 cut(s)	212, 698, 762, 1318
BspEI	TCCGGA	1 cut(s)	782
BspMI	ACCTGC	1 cut(s)	1068
BspPI	GGATC	6 cut(s)	437, 481, 546, 559, 607, 1073
BspQI	GCTCTTC	1 cut(s)	83
BspT104I	TTCGAA	1 cut(s)	81
BspT107I	GGYRCC	2 cut(s)	410, 1193
BspTNI	GGTCTC	1 cut(s)	236
BsrBI	CCGCTC	1 cut(s)	222
BsrFI	RCCGGY	2 cut(s)	29, 407
BsrGI	TGTACA	1 cut(s)	367
BsrI	ACTGG	1 cut(s)	623
BssAI	RCCGGY	2 cut(s)	29, 407
BssECI	CCNNGG	8 cut(s)	240, 393, 565, 908, 915, 944, 1082, 1197
BssNI	GRCGYC	2 cut(s)	348, 987
BssT1I	CCWWGG	2 cut(s)	915, 1197
Bst2UI	CCWGG	1 cut(s)	104
Bst4CI	ACNGT	6 cut(s)	11, 50, 230, 367, 1160, 1350
Bst6I	CTCTTC	1 cut(s)	83
BstACI	GRCGYC	2 cut(s)	348, 987
BstAUI	TGTACA	1 cut(s)	367
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	7 cut(s)	74, 109, 247, 375, 596, 710, 776
BstDEI	CTNAG	6 cut(s)	127, 199, 685, 730, 770, 1305
BstDSI	CCRYGG	2 cut(s)	240, 1082
BstEII	GGTNACC	1 cut(s)	11
BstF5I	GGATG	3 cut(s)	149, 1081, 1306
BstMAI	GTCTC	2 cut(s)	236, 926
BstMCI	CGRYCG	3 cut(s)	49, 357, 633
BstMWI	GCNNNNNNNGC	4 cut(s)	278, 404, 775, 823
BstNI	CCWGG	1 cut(s)	104
BstPI	GGTNACC	1 cut(s)	11
BstSCI	CCNGG	9 cut(s)	102, 159, 165, 180, 186, 564, 565, 627, 943
BstV1I	GCAGC	2 cut(s)	316, 813
BstV2I	GAAGAC	1 cut(s)	682
BstX2I	RGATCY	2 cut(s)	192, 551
BstXI	CCANNNNNNTGG	1 cut(s)	922
BstYI	RGATCY	2 cut(s)	192, 551
BstZI	CGGCCG	1 cut(s)	630
BsuI	GTATCC	1 cut(s)	540
BsuRI	GGCC	5 cut(s)	33, 387, 632, 653, 806
BtgI	CCRYGG	2 cut(s)	240, 1082
BtgZI	GCGATG	1 cut(s)	332
BtrI	CACGTC	2 cut(s)	822, 994
BtsCI	GGATG	3 cut(s)	149, 1081, 1306
BtsIMutI	CAGTG	2 cut(s)	616, 1156
BveI	ACCTGC	1 cut(s)	1068
Cac8I	GCNNGC	7 cut(s)	74, 109, 247, 375, 596, 710, 776
Cfr10I	RCCGGY	2 cut(s)	29, 407
Cfr13I	GGNCC	9 cut(s)	32, 113, 163, 184, 621, 652, 904, 912, 1105
Cfr9I	CCCGGG	1 cut(s)	565
CseI	GACGC	1 cut(s)	356
Csp6I	GTAC	4 cut(s)	368, 411, 492, 880
CviAII	CATG	2 cut(s)	604, 1114
CviQI	GTAC	4 cut(s)	368, 411, 492, 880
DdeI	CTNAG	6 cut(s)	127, 199, 685, 730, 770, 1305
DriI	GACNNNNNGTC	1 cut(s)	910
EaeI	YGGCCR	2 cut(s)	630, 804
EagI	CGGCCG	1 cut(s)	630
Eam1104I	CTCTTC	1 cut(s)	83
Eam1105I	GACNNNNNGTC	1 cut(s)	910
EarI	CTCTTC	1 cut(s)	83
EciI	GGCGGA	1 cut(s)	970
Ecl136II	GAGCTC	3 cut(s)	684, 855, 1395
EclXI	CGGCCG	1 cut(s)	630
Eco130I	CCWWGG	2 cut(s)	915, 1197
Eco24I	GRGCYC	3 cut(s)	686, 857, 1397
Eco31I	GGTCTC	1 cut(s)	236
Eco47I	GGWCC	7 cut(s)	113, 163, 184, 621, 904, 912, 1105
Eco52I	CGGCCG	1 cut(s)	630
Eco53kI	GAGCTC	3 cut(s)	684, 855, 1395
Eco88I	CYCGRG	6 cut(s)	139, 565, 637, 654, 883, 907
Eco91I	GGTNACC	1 cut(s)	11
EcoICRI	GAGCTC	3 cut(s)	684, 855, 1395
EcoO109I	RGGNCCY	3 cut(s)	184, 904, 1105
EcoO65I	GGTNACC	1 cut(s)	11
EcoRII	CCWGG	1 cut(s)	102
EcoT14I	CCWWGG	2 cut(s)	915, 1197
EcoT38I	GRGCYC	3 cut(s)	686, 857, 1397
ErhI	CCWWGG	2 cut(s)	915, 1197
Esp3I	CGTCTC	1 cut(s)	926
FaeI	CATG	2 cut(s)	607, 1117
FaiI	YATR	8 cut(s)	176, 206, 509, 605, 891, 1115, 1272, 1319
FaqI	GGGAC	5 cut(s)	99, 197, 582, 917, 986
FatI	CATG	2 cut(s)	603, 1113
FauI	CCCGC	2 cut(s)	382, 717
FblI	GTMKAC	2 cut(s)	990, 1010
Fnu4HI	GCNGC	6 cut(s)	132, 305, 326, 543, 696, 827
FokI	GGATG	3 cut(s)	136, 1088, 1313
FriOI	GRGCYC	3 cut(s)	686, 857, 1397
Fsp4HI	GCNGC	6 cut(s)	132, 305, 326, 543, 696, 827
FspBI	CTAG	1 cut(s)	1212
GluI	GCNGC	6 cut(s)	132, 305, 326, 543, 696, 827
GsuI	CTGGAG	1 cut(s)	1059
HaeIII	GGCC	5 cut(s)	33, 387, 632, 653, 806
HgaI	GACGC	1 cut(s)	356
Hin1I	GRCGYC	2 cut(s)	348, 987
Hin1II	CATG	2 cut(s)	607, 1117
HincII	GTYRAC	2 cut(s)	991, 1011
HindII	GTYRAC	2 cut(s)	991, 1011
HphI	GGTGA	1 cut(s)	776
Hpy166II	GTNNAC	3 cut(s)	991, 997, 1011
Hpy188III	TCNNGA	9 cut(s)	116, 139, 339, 533, 670, 754, 783, 1038, 1212
Hpy8I	GTNNAC	3 cut(s)	991, 997, 1011
HpyAV	CCTTC	3 cut(s)	246, 1325, 1367
HpyCH4III	ACNGT	6 cut(s)	11, 50, 230, 367, 1160, 1350
HpyCH4IV	ACGT	4 cut(s)	63, 821, 987, 993
HpyCH4V	TGCA	2 cut(s)	726, 1412
HpyF10VI	GCNNNNNNNGC	4 cut(s)	278, 404, 775, 823
HpyF3I	CTNAG	6 cut(s)	127, 199, 685, 730, 770, 1305
HpySE526I	ACGT	4 cut(s)	63, 821, 987, 993
Hsp92I	GRCGYC	2 cut(s)	348, 987
Hsp92II	CATG	2 cut(s)	607, 1117
KflI	GGGWCCC	2 cut(s)	184, 904
Kpn2I	TCCGGA	1 cut(s)	782
KpnI	GGTACC	1 cut(s)	414
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	6 cut(s)	44, 227, 425, 852, 860, 957
Lsp1109I	GCAGC	2 cut(s)	316, 813
LweI	GCATC	3 cut(s)	303, 735, 1291
MaeI	CTAG	1 cut(s)	1212
MaeII	ACGT	4 cut(s)	63, 821, 987, 993
MaeIII	GTNAC	5 cut(s)	11, 358, 658, 859, 1160
MbiI	CCGCTC	1 cut(s)	222
MboII	GAAGA	7 cut(s)	70, 187, 637, 682, 808, 1376, 1395
MflI	RGATCY	2 cut(s)	192, 551
MhlI	GDGCHC	3 cut(s)	686, 857, 1397
MluCI	AATT	3 cut(s)	1066, 1152, 1279
MlyI	GAGTC	6 cut(s)	113, 308, 564, 968, 1006, 1016
MmeI	TCCRAC	7 cut(s)	46, 66, 177, 249, 405, 585, 790
MroI	TCCGGA	1 cut(s)	782
MseI	TTAA	1 cut(s)	1125
MslI	CAYNNNNRTG	1 cut(s)	731
MspR9I	CCNGG	9 cut(s)	104, 161, 167, 182, 188, 566, 567, 629, 945
MvaI	CCWGG	1 cut(s)	104
MwoI	GCNNNNNNNGC	4 cut(s)	278, 404, 775, 823
NciI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 945
NlaIII	CATG	2 cut(s)	607, 1117
NmeAIII	GCCGAG	5 cut(s)	374, 548, 705, 770, 1245
NmuCI	GTSAC	2 cut(s)	358, 859
NspV	TTCGAA	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	139
PciSI	GCTCTTC	1 cut(s)	83
PcsI	WCGNNNNNNNCGW	3 cut(s)	354, 677, 699
PfeI	GAWTC	5 cut(s)	252, 342, 466, 557, 642
PkrI	GCNGC	6 cut(s)	133, 306, 327, 544, 697, 828
Ple19I	CGATCG	1 cut(s)	357
PleI	GAGTC	6 cut(s)	113, 307, 564, 968, 1006, 1015
PpsI	GAGTC	6 cut(s)	113, 307, 564, 968, 1006, 1015
PpuMI	RGGWCCY	3 cut(s)	184, 904, 1105
PsiI	TTATAA	1 cut(s)	1319
Psp124BI	GAGCTC	3 cut(s)	686, 857, 1397
Psp5II	RGGWCCY	3 cut(s)	184, 904, 1105
Psp6I	CCWGG	1 cut(s)	102
PspEI	GGTNACC	1 cut(s)	11
PspGI	CCWGG	1 cut(s)	102
PspPI	GGNCC	9 cut(s)	32, 113, 163, 184, 621, 652, 904, 912, 1105
PspPPI	RGGWCCY	3 cut(s)	184, 904, 1105
PsrI	GAACNNNNNNTAC	2 cut(s)	475, 507
PsuI	RGATCY	2 cut(s)	192, 551
PvuI	CGATCG	1 cut(s)	357
RsaI	GTAC	4 cut(s)	369, 412, 493, 881
RsaNI	GTAC	4 cut(s)	368, 411, 492, 880
RseI	CAYNNNNRTG	1 cut(s)	731
SacI	GAGCTC	3 cut(s)	686, 857, 1397
SalI	GTCGAC	2 cut(s)	989, 1009
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	1 cut(s)	1125
SatI	GCNGC	6 cut(s)	132, 305, 326, 543, 696, 827
Sau96I	GGNCC	9 cut(s)	32, 113, 163, 184, 621, 652, 904, 912, 1105
SchI	GAGTC	6 cut(s)	113, 308, 564, 968, 1006, 1016
ScrFI	CCNGG	9 cut(s)	104, 161, 167, 182, 188, 566, 567, 629, 945
SduI	GDGCHC	3 cut(s)	686, 857, 1397
SfaNI	GCATC	3 cut(s)	303, 735, 1291
Sfr274I	CTCGAG	1 cut(s)	139
SfuI	TTCGAA	1 cut(s)	81
SgrDI	CGTCGACG	1 cut(s)	989
SinI	GGWCC	7 cut(s)	113, 163, 184, 621, 904, 912, 1105
SlaI	CTCGAG	1 cut(s)	139
SmaI	CCCGGG	1 cut(s)	567
SmiMI	CAYNNNNRTG	1 cut(s)	731
SmlI	CTYRAG	3 cut(s)	139, 308, 752
SmoI	CTYRAG	3 cut(s)	139, 308, 752
Sse9I	AATT	3 cut(s)	1066, 1152, 1279
SspMI	CTAG	1 cut(s)	1212
SstI	GAGCTC	3 cut(s)	686, 857, 1397
StyD4I	CCNGG	9 cut(s)	102, 159, 165, 180, 186, 564, 565, 627, 943
StyI	CCWWGG	2 cut(s)	915, 1197
TaaI	ACNGT	6 cut(s)	11, 50, 230, 367, 1160, 1350
TaiI	ACGT	4 cut(s)	66, 824, 990, 996
TaqII	GACCGA	1 cut(s)	638
TasI	AATT	3 cut(s)	1066, 1152, 1279
TatI	WGTACW	1 cut(s)	367
TauI	GCSGC	4 cut(s)	134, 328, 545, 698
TfiI	GAWTC	5 cut(s)	252, 342, 466, 557, 642
Tru1I	TTAA	1 cut(s)	1125
Tru9I	TTAA	1 cut(s)	1125
TscAI	CASTG	2 cut(s)	623, 1163
TseFI	GTSAC	2 cut(s)	358, 859
TseI	GCWGC	2 cut(s)	304, 826
Tsp45I	GTSAC	2 cut(s)	358, 859
TspDTI	ATGAA	2 cut(s)	163, 291
TspGWI	ACGGA	5 cut(s)	321, 412, 479, 847, 1071
TspMI	CCCGGG	1 cut(s)	565
TspRI	CASTG	2 cut(s)	623, 1163
VpaK11BI	GGWCC	7 cut(s)	113, 163, 184, 621, 904, 912, 1105
XapI	RAATTY	1 cut(s)	1279
XbaI	TCTAGA	1 cut(s)	1211
XhoI	CTCGAG	1 cut(s)	139
XmaI	CCCGGG	1 cut(s)	565
XmiI	GTMKAC	2 cut(s)	990, 1010
XspI	CTAG	1 cut(s)	1212
ZraI	GACGTC	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.