Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0009361

Physical Location & Seq

Genomic Coordinates Reverse (-)

38402274 .. 38412299

Gene Structure 10026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00416400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGAAAACGGTAACCACCACACAGCCACCGGCCCTCGCTCCGACGACCGTATCAAGCTCAACGTCGGAGGCAAGCTCTTCGAAACTACCTTATCGACAATCCAGGCAGGCGGTCCCGACTCTCTCTTAGCCGCCCTCTCGAGCCGGACATCCGACGACCGGGACCCGGTTTTCATTGACCGGGACCCGGAGATCTTCTCAGTCATACTCTCTCTCCTCCGCTCCGACGGTCTCCCTTCCACGGCTCGCCGATTCGCCAAGCAAGAACTCGCCGATGAAGCTCTCTACTACGGCATCGAGTTGCAGCTCAAGTCGGCGATGTTGCCGCCTCCGTTATCAGGAATCGACGCCTCGATCGTCACAACTGTACAGCCCGCCTCCGACGGCCTCCCCTCGGCGATCACAGCTGGTACCGACGGCTCCGTTTGGATCGCACACGGCGGTCAAATATCCAGCTACGATTGGAATCTGTGCCACGCCGGAACGATCCGTACTCATTTGGAGGACATAAACTCGATTTGCCGAGTTTATCCTGAAATCGCCGCCGTAGGATCCGAATCCGACCCGGGACTCCACTTCTACGATTTCTCCGGCGTGCGAAACATGGGGTCGATCCACTGGACCGACCCGGCCGACCCGAGAATCTTCAAGGCCCGAGTTACGTCCGTCTCGAACTCGCCGAGCTCAGCCTTCGCCGCTTTCGATTGCCCGCACAGAGAGAACTGCATCTTAGTGATCGACAAATCAACGCTCAAGATCGTCGGTGAGCTGAGCAGGCAATCCGGAAGCTCGGCGAAGAACTTGGCCGTCGGAAAGCTGACGTGGCTGCCTGAAACGGGCTTGATTGTTGGGAGCTCCGTCACTTGCGGTGCGTTCGGGTACTCGGGTTATATCCGAATGTGGGACCCGAGGTCCAAGGAGGTGGTTTGGGAGACGAACGAGCCAGGGTCGGGACGGAGCAGTAGGTTCGGGGACTCCTTCGCCGACGTCGACGTGGACATTGAGGAGTCGACTCTGTTCAAGGTGTGTTCAAAGTCTGGAGATTTGGCAATGGCAGACCTGCGTAATTTAGGGGATGATCCGTGGGTTTATTTACAAGATAAGGACCCGAGCATGAGGAACATAAAGGGGGTGGCAATAGCAGTAGTAGGACCAAAAACTTTGGCTTGCAGAAAATCTTATTATTTTGGGAGCTCAAGAGGCTCCCAGAGAGTGGTTAGTTCCATGCCAATGTTTTTTGGAGCTTCGGACCTATTGCCTCAGAAAAACAGGATCAAGGAAGATAGCTGCACCAGGTACAACATGTTATTGCTTCGTTATATCGATGTGGATTATCAGAGGTTAAAAAGGAGATGTGGAGTCATGCAAAAAATTGCAAGCGCTGGAGGAAGGGTACTGTTGGTTAGAGAGGCCATGACTGAGGGTCAAGTTTGGGATCCCAGCCATATTCATCGTGTTGTATCACAGCCGCAAAAGTTGAGACCCGGAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0015031 GO:0015833 GO:0033036 GO:0034613 GO:0042886 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB_2

Protein Analysis

497

Amino Acids

54.29

Weight (kDa)

6.39

Isoelectric Point (pI)

41.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB_2	PF02214	18 - 102	6.5e-14	BTB/POZ domain
Beta_prop_At2g24240	PF25279	131 - 398	2.5e-16	At2g24240-like, C-terminal beta propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09030
fragaria_vesca	FvH4_6g11860
malus_domestica	MD04G1148400.v1.1 MD12G1162000.v1.1
prunus_persica	Prupe.6G272700_v2.0.a1
pyrus_communis	pycom12g15380
rosa_chinensis	RchiOBHm_Chr3g0463601
rosa_laevigata	RLG00000024769
rosa_multiflora	Rmu_sc0003267.1_g000022 Rmu_sc0012012.1_g000004 Rmu_sc0019822.1_g000002
rosa_roxburghii	Rroxscaffold_6G00416400
rosa_rugosa	Rorug03G0066200 Rorug03G0066300 Rorug03G0066400 Rorug03G0066400 Rorug03G0066500
rosa_samantha	Rh3AG123300 Rh3BG128200 Rh3CG130000 Rh3DG128800
rosa_wichuraiana	Rw3G010430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	990
Acc36I	ACCTGC	1 cut(s)	1068
Acc65I	GGTACC	1 cut(s)	410
AccB1I	GGYRCC	1 cut(s)	410
AccB7I	CCANNNNNTGG	1 cut(s)	1213
AccBSI	CCGCTC	1 cut(s)	222
AccI	GTMKAC	2 cut(s)	990, 1010
AccIII	TCCGGA	1 cut(s)	782
AclWI	GGATC	9 cut(s)	437, 481, 546, 559, 607, 1073, 1280, 1430, 1443
AcoI	YGGCCR	2 cut(s)	630, 804
AcyI	GRCGYC	2 cut(s)	348, 987
AfaI	GTAC	6 cut(s)	369, 412, 493, 881, 1298, 1395
AfeI	AGCGCT	1 cut(s)	1381
AflIII	ACRYGT	1 cut(s)	1302
AgsI	TTSAA	3 cut(s)	649, 1021, 1032
AhdI	GACNNNNNGTC	2 cut(s)	910, 1422
AjiI	CACGTC	2 cut(s)	822, 994
AjnI	CCWGG	3 cut(s)	102, 943, 1292
Alw21I	GWGCWC	3 cut(s)	686, 857, 1196
Alw26I	GTCTC	5 cut(s)	236, 673, 926, 1474, 1482
AlwI	GGATC	9 cut(s)	437, 481, 546, 559, 607, 1073, 1280, 1430, 1443
Ama87I	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
Aor13HI	TCCGGA	1 cut(s)	782
Aor51HI	AGCGCT	1 cut(s)	1381
AoxI	GGCC	6 cut(s)	31, 385, 630, 651, 804, 1410
ApeKI	GCWGC	3 cut(s)	304, 826, 1287
Asp718I	GGTACC	1 cut(s)	410
AspLEI	GCGC	1 cut(s)	1382
AsuC2I	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 1485
AsuHPI	GGTGA	1 cut(s)	776
AsuII	TTCGAA	1 cut(s)	81
AvaI	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
AvaII	GGWCC	9 cut(s)	113, 163, 184, 621, 904, 912, 1105, 1151, 1249
BaeI	ACNNNNGTAYC	4 cut(s)	34, 67, 871, 904
BamHI	GGATCC	2 cut(s)	551, 1435
BanI	GGYRCC	1 cut(s)	410
BanII	GRGCYC	3 cut(s)	686, 857, 1196
Bbv12I	GWGCWC	3 cut(s)	686, 857, 1196
BbvI	GCAGC	3 cut(s)	316, 813, 1274
BceAI	ACGGC	7 cut(s)	258, 307, 400, 433, 454, 530, 791
BcgI	CGANNNNNNTGC	4 cut(s)	61, 95, 949, 983
BciT130I	CCWGG	3 cut(s)	104, 945, 1294
BcnI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 1485
BcoDI	GTCTC	5 cut(s)	236, 673, 926, 1474, 1482
BfaI	CTAG	1 cut(s)	1492
BfoI	RGCGCY	1 cut(s)	1383
BfuAI	ACCTGC	1 cut(s)	1068
BglII	AGATCT	1 cut(s)	192
BisI	GCNGC	8 cut(s)	132, 305, 326, 543, 696, 827, 1288, 1469
BlpI	GCTNAGC	2 cut(s)	685, 770
BlsI	GCNGC	8 cut(s)	133, 306, 327, 544, 697, 828, 1289, 1470
Bme18I	GGWCC	9 cut(s)	113, 163, 184, 621, 904, 912, 1105, 1151, 1249
BmeRI	GACNNNNNGTC	2 cut(s)	910, 1422
BmeT110I	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
BmgBI	CACGTC	2 cut(s)	822, 994
BmsI	GCATC	2 cut(s)	303, 735
BplI	GAGNNNNNCTC	4 cut(s)	60, 92, 182, 214
BpmI	CTGGAG	2 cut(s)	1059, 1404
Bpu1102I	GCTNAGC	2 cut(s)	685, 770
Bpu14I	TTCGAA	1 cut(s)	81
BpuEI	CTTGAG	3 cut(s)	293, 737, 1180
BpuMI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 1485
Bsa29I	ATCGAT	1 cut(s)	1323
BsaBI	GATNNNNATC	2 cut(s)	465, 556
BsaHI	GRCGYC	2 cut(s)	348, 987
BsaI	GGTCTC	2 cut(s)	236, 1474
BsaJI	CCNNGG	7 cut(s)	240, 393, 565, 908, 915, 944, 1082
BsaWI	WCCGGW	1 cut(s)	782
BsaXI	ACNNNNNCTCC	6 cut(s)	198, 228, 572, 602, 1377, 1407
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	1 cut(s)	623
Bse3DI	GCAATG	1 cut(s)	1056
Bse8I	GATNNNNATC	2 cut(s)	465, 556
BseAI	TCCGGA	1 cut(s)	782
BseBI	CCWGG	3 cut(s)	104, 945, 1294
BseCI	ATCGAT	1 cut(s)	1323
BseDI	CCNNGG	7 cut(s)	240, 393, 565, 908, 915, 944, 1082
BseGI	GGATG	2 cut(s)	149, 1081
BseJI	GATNNNNATC	2 cut(s)	465, 556
BseMI	GCAATG	1 cut(s)	1056
BseMII	CTCAG	5 cut(s)	213, 699, 761, 1274, 1410
BseNI	ACTGG	1 cut(s)	623
BseRI	GAGGAG	2 cut(s)	206, 1019
BseX3I	CGGCCG	1 cut(s)	630
BseXI	GCAGC	3 cut(s)	316, 813, 1274
BseYI	CCCAGC	1 cut(s)	1439
BsgI	GTGCAG	1 cut(s)	1273
Bsh1285I	CGRYCG	4 cut(s)	49, 160, 357, 633
BshFI	GGCC	6 cut(s)	33, 387, 632, 653, 806, 1412
BshNI	GGYRCC	1 cut(s)	410
BshVI	ATCGAT	1 cut(s)	1323
BsiEI	CGRYCG	4 cut(s)	49, 160, 357, 633
BsiHKAI	GWGCWC	3 cut(s)	686, 857, 1196
BsiHKCI	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
BslFI	GGGAC	7 cut(s)	99, 176, 197, 582, 917, 966, 986
BsmAI	GTCTC	5 cut(s)	236, 673, 926, 1474, 1482
BsmBI	CGTCTC	2 cut(s)	673, 926
BsmFI	GGGAC	7 cut(s)	99, 176, 197, 582, 917, 966, 986
BsnI	GGCC	6 cut(s)	33, 387, 632, 653, 806, 1412
Bso31I	GGTCTC	2 cut(s)	236, 1474
BsoBI	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
Bsp119I	TTCGAA	1 cut(s)	81
Bsp1286I	GDGCHC	3 cut(s)	686, 857, 1196
Bsp13I	TCCGGA	1 cut(s)	782
Bsp1407I	TGTACA	1 cut(s)	367
Bsp1720I	GCTNAGC	2 cut(s)	685, 770
BspANI	GGCC	6 cut(s)	33, 387, 632, 653, 806, 1412
BspCNI	CTCAG	5 cut(s)	212, 698, 762, 1273, 1411
BspDI	ATCGAT	1 cut(s)	1323
BspEI	TCCGGA	1 cut(s)	782
BspMI	ACCTGC	1 cut(s)	1068
BspPI	GGATC	9 cut(s)	437, 481, 546, 559, 607, 1073, 1280, 1430, 1443
BspQI	GCTCTTC	1 cut(s)	83
BspT104I	TTCGAA	1 cut(s)	81
BspT107I	GGYRCC	1 cut(s)	410
BspTNI	GGTCTC	2 cut(s)	236, 1474
BsrBI	CCGCTC	1 cut(s)	222
BsrDI	GCAATG	1 cut(s)	1056
BsrFI	RCCGGY	1 cut(s)	29
BsrGI	TGTACA	1 cut(s)	367
BsrI	ACTGG	1 cut(s)	623
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	7 cut(s)	240, 393, 565, 908, 915, 944, 1082
BssNI	GRCGYC	2 cut(s)	348, 987
BssT1I	CCWWGG	1 cut(s)	915
Bst2UI	CCWGG	3 cut(s)	104, 945, 1294
Bst4CI	ACNGT	5 cut(s)	11, 50, 230, 367, 1398
Bst6I	CTCTTC	1 cut(s)	83
BstACI	GRCGYC	2 cut(s)	348, 987
BstAUI	TGTACA	1 cut(s)	367
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	9 cut(s)	74, 109, 247, 375, 596, 710, 776, 1168, 1378
BstDEI	CTNAG	7 cut(s)	127, 199, 685, 730, 770, 1260, 1419
BstDSI	CCRYGG	2 cut(s)	240, 1082
BstEII	GGTNACC	1 cut(s)	11
BstF5I	GGATG	2 cut(s)	149, 1081
BstH2I	RGCGCY	1 cut(s)	1383
BstHHI	GCGC	1 cut(s)	1382
BstMAI	GTCTC	5 cut(s)	236, 673, 926, 1474, 1482
BstMCI	CGRYCG	4 cut(s)	49, 160, 357, 633
BstMWI	GCNNNNNNNGC	6 cut(s)	278, 404, 695, 775, 823, 1200
BstNI	CCWGG	3 cut(s)	104, 945, 1294
BstNSI	RCATGY	1 cut(s)	1306
BstPI	GGTNACC	1 cut(s)	11
BstV1I	GCAGC	3 cut(s)	316, 813, 1274
BstX2I	RGATCY	3 cut(s)	192, 551, 1435
BstXI	CCANNNNNNTGG	1 cut(s)	922
BstYI	RGATCY	3 cut(s)	192, 551, 1435
BstZI	CGGCCG	1 cut(s)	630
Bsu15I	ATCGAT	1 cut(s)	1323
BsuRI	GGCC	6 cut(s)	33, 387, 632, 653, 806, 1412
BsuTUI	ATCGAT	1 cut(s)	1323
BtgI	CCRYGG	2 cut(s)	240, 1082
BtgZI	GCGATG	1 cut(s)	332
BtrI	CACGTC	2 cut(s)	822, 994
BtsCI	GGATG	2 cut(s)	149, 1081
BtsIMutI	CAGTG	1 cut(s)	616
BveI	ACCTGC	1 cut(s)	1068
Cac8I	GCNNGC	9 cut(s)	74, 109, 247, 375, 596, 710, 776, 1168, 1378
CfoI	GCGC	1 cut(s)	1382
Cfr10I	RCCGGY	1 cut(s)	29
Cfr9I	CCCGGG	1 cut(s)	565
ClaI	ATCGAT	1 cut(s)	1323
CseI	GACGC	1 cut(s)	356
CsiI	ACCWGGT	1 cut(s)	1292
Csp6I	GTAC	6 cut(s)	368, 411, 492, 880, 1297, 1394
CviAII	CATG	6 cut(s)	604, 1114, 1225, 1303, 1363, 1414
CviQI	GTAC	6 cut(s)	368, 411, 492, 880, 1297, 1394
DdeI	CTNAG	7 cut(s)	127, 199, 685, 730, 770, 1260, 1419
DriI	GACNNNNNGTC	2 cut(s)	910, 1422
EaeI	YGGCCR	2 cut(s)	630, 804
EagI	CGGCCG	1 cut(s)	630
Eam1104I	CTCTTC	1 cut(s)	83
Eam1105I	GACNNNNNGTC	2 cut(s)	910, 1422
EarI	CTCTTC	1 cut(s)	83
Ecl136II	GAGCTC	3 cut(s)	684, 855, 1194
EclXI	CGGCCG	1 cut(s)	630
Eco130I	CCWWGG	1 cut(s)	915
Eco24I	GRGCYC	3 cut(s)	686, 857, 1196
Eco31I	GGTCTC	2 cut(s)	236, 1474
Eco47I	GGWCC	9 cut(s)	113, 163, 184, 621, 904, 912, 1105, 1151, 1249
Eco47III	AGCGCT	1 cut(s)	1381
Eco52I	CGGCCG	1 cut(s)	630
Eco53kI	GAGCTC	3 cut(s)	684, 855, 1194
Eco88I	CYCGRG	7 cut(s)	139, 565, 637, 654, 883, 907, 1108
Eco91I	GGTNACC	1 cut(s)	11
EcoICRI	GAGCTC	3 cut(s)	684, 855, 1194
EcoO109I	RGGNCCY	4 cut(s)	163, 184, 904, 1105
EcoO65I	GGTNACC	1 cut(s)	11
EcoRII	CCWGG	3 cut(s)	102, 943, 1292
EcoT14I	CCWWGG	1 cut(s)	915
EcoT38I	GRGCYC	3 cut(s)	686, 857, 1196
ErhI	CCWWGG	1 cut(s)	915
Esp3I	CGTCTC	2 cut(s)	673, 926
FaeI	CATG	6 cut(s)	607, 1117, 1228, 1306, 1366, 1417
FaqI	GGGAC	7 cut(s)	99, 176, 197, 582, 917, 966, 986
FatI	CATG	6 cut(s)	603, 1113, 1224, 1302, 1362, 1413
FauI	CCCGC	2 cut(s)	382, 717
FblI	GTMKAC	2 cut(s)	990, 1010
Fnu4HI	GCNGC	8 cut(s)	132, 305, 326, 543, 696, 827, 1288, 1469
FokI	GGATG	2 cut(s)	136, 1088
FriOI	GRGCYC	3 cut(s)	686, 857, 1196
Fsp4HI	GCNGC	8 cut(s)	132, 305, 326, 543, 696, 827, 1288, 1469
FspBI	CTAG	1 cut(s)	1492
GlaI	GCGC	1 cut(s)	1381
GluI	GCNGC	8 cut(s)	132, 305, 326, 543, 696, 827, 1288, 1469
GsaI	CCCAGC	1 cut(s)	1443
GsuI	CTGGAG	2 cut(s)	1059, 1404
HaeII	RGCGCY	1 cut(s)	1383
HaeIII	GGCC	6 cut(s)	33, 387, 632, 653, 806, 1412
HgaI	GACGC	1 cut(s)	356
HhaI	GCGC	1 cut(s)	1382
Hin1I	GRCGYC	2 cut(s)	348, 987
Hin1II	CATG	6 cut(s)	607, 1117, 1228, 1306, 1366, 1417
Hin6I	GCGC	1 cut(s)	1380
HinP1I	GCGC	1 cut(s)	1380
HincII	GTYRAC	2 cut(s)	991, 1011
HindII	GTYRAC	2 cut(s)	991, 1011
HphI	GGTGA	1 cut(s)	776
Hpy166II	GTNNAC	3 cut(s)	991, 997, 1011
Hpy8I	GTNNAC	3 cut(s)	991, 997, 1011
HpyAV	CCTTC	4 cut(s)	246, 700, 988, 1383
HpyCH4III	ACNGT	5 cut(s)	11, 50, 230, 367, 1398
HpyCH4IV	ACGT	5 cut(s)	63, 662, 821, 987, 993
HpyCH4V	TGCA	6 cut(s)	304, 726, 1170, 1290, 1366, 1376
HpyF10VI	GCNNNNNNNGC	6 cut(s)	278, 404, 695, 775, 823, 1200
HpyF3I	CTNAG	7 cut(s)	127, 199, 685, 730, 770, 1260, 1419
HpySE526I	ACGT	5 cut(s)	63, 662, 821, 987, 993
Hsp92I	GRCGYC	2 cut(s)	348, 987
Hsp92II	CATG	6 cut(s)	607, 1117, 1228, 1306, 1366, 1417
HspAI	GCGC	1 cut(s)	1380
KflI	GGGWCCC	3 cut(s)	163, 184, 904
Kpn2I	TCCGGA	1 cut(s)	782
KpnI	GGTACC	1 cut(s)	414
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	9 cut(s)	44, 227, 425, 852, 860, 957, 1191, 1208, 1241
Lsp1109I	GCAGC	3 cut(s)	316, 813, 1274
LweI	GCATC	2 cut(s)	303, 735
MabI	ACCWGGT	1 cut(s)	1292
MaeI	CTAG	1 cut(s)	1492
MaeII	ACGT	5 cut(s)	63, 662, 821, 987, 993
MaeIII	GTNAC	4 cut(s)	11, 358, 658, 859
MbiI	CCGCTC	1 cut(s)	222
MboII	GAAGA	5 cut(s)	70, 187, 637, 808, 1292
MflI	RGATCY	3 cut(s)	192, 551, 1435
MhlI	GDGCHC	3 cut(s)	686, 857, 1196
MluCI	AATT	2 cut(s)	1066, 1371
MlyI	GAGTC	6 cut(s)	113, 564, 968, 1006, 1016, 1368
MmeI	TCCRAC	7 cut(s)	46, 66, 177, 249, 405, 585, 790
MroI	TCCGGA	1 cut(s)	782
MseI	TTAA	1 cut(s)	1343
MslI	CAYNNNNRTG	2 cut(s)	731, 1229
MspA1I	CMGCKG	1 cut(s)	407
MvaI	CCWGG	3 cut(s)	104, 945, 1294
MwoI	GCNNNNNNNGC	6 cut(s)	278, 404, 695, 775, 823, 1200
NciI	CCSGG	8 cut(s)	161, 167, 182, 188, 566, 567, 629, 1485
NlaIII	CATG	6 cut(s)	607, 1117, 1228, 1306, 1366, 1417
NmeAIII	GCCGAG	4 cut(s)	374, 548, 705, 770
NmuCI	GTSAC	2 cut(s)	358, 859
NspI	RCATGY	1 cut(s)	1306
NspV	TTCGAA	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	139
PciI	ACATGT	1 cut(s)	1302
PciSI	GCTCTTC	1 cut(s)	83
PcsI	WCGNNNNNNNCGW	5 cut(s)	354, 668, 677, 699, 987
PfeI	GAWTC	5 cut(s)	252, 342, 466, 557, 642
PflMI	CCANNNNNTGG	1 cut(s)	1213
PkrI	GCNGC	8 cut(s)	133, 306, 327, 544, 697, 828, 1289, 1470
Ple19I	CGATCG	1 cut(s)	357
PleI	GAGTC	6 cut(s)	113, 564, 968, 1006, 1015, 1367
PpsI	GAGTC	6 cut(s)	113, 564, 968, 1006, 1015, 1367
PpuMI	RGGWCCY	4 cut(s)	163, 184, 904, 1105
PscI	ACATGT	1 cut(s)	1302
Psp124BI	GAGCTC	3 cut(s)	686, 857, 1196
Psp5II	RGGWCCY	4 cut(s)	163, 184, 904, 1105
Psp6I	CCWGG	3 cut(s)	102, 943, 1292
PspEI	GGTNACC	1 cut(s)	11
PspFI	CCCAGC	1 cut(s)	1439
PspGI	CCWGG	3 cut(s)	102, 943, 1292
PspPPI	RGGWCCY	4 cut(s)	163, 184, 904, 1105
PsrI	GAACNNNNNNTAC	2 cut(s)	475, 507
PsuI	RGATCY	3 cut(s)	192, 551, 1435
PvuI	CGATCG	1 cut(s)	357
PvuII	CAGCTG	1 cut(s)	407
RsaI	GTAC	6 cut(s)	369, 412, 493, 881, 1298, 1395
RsaNI	GTAC	6 cut(s)	368, 411, 492, 880, 1297, 1394
RseI	CAYNNNNRTG	2 cut(s)	731, 1229
SacI	GAGCTC	3 cut(s)	686, 857, 1196
SalI	GTCGAC	2 cut(s)	989, 1009
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	1 cut(s)	1343
SatI	GCNGC	8 cut(s)	132, 305, 326, 543, 696, 827, 1288, 1469
SchI	GAGTC	6 cut(s)	113, 564, 968, 1006, 1016, 1368
SduI	GDGCHC	3 cut(s)	686, 857, 1196
SexAI	ACCWGGT	1 cut(s)	1292
SfaNI	GCATC	2 cut(s)	303, 735
Sfr274I	CTCGAG	1 cut(s)	139
SfuI	TTCGAA	1 cut(s)	81
SgrDI	CGTCGACG	1 cut(s)	989
SinI	GGWCC	9 cut(s)	113, 163, 184, 621, 904, 912, 1105, 1151, 1249
SlaI	CTCGAG	1 cut(s)	139
SmaI	CCCGGG	1 cut(s)	567
SmiMI	CAYNNNNRTG	2 cut(s)	731, 1229
SmlI	CTYRAG	4 cut(s)	139, 308, 752, 1195
SmoI	CTYRAG	4 cut(s)	139, 308, 752, 1195
Sse9I	AATT	2 cut(s)	1066, 1371
SspMI	CTAG	1 cut(s)	1492
SstI	GAGCTC	3 cut(s)	686, 857, 1196
StyI	CCWWGG	1 cut(s)	915
TaaI	ACNGT	5 cut(s)	11, 50, 230, 367, 1398
TaiI	ACGT	5 cut(s)	66, 665, 824, 990, 996
TaqII	GACCGA	1 cut(s)	638
TasI	AATT	2 cut(s)	1066, 1371
TatI	WGTACW	1 cut(s)	367
TauI	GCSGC	5 cut(s)	134, 328, 545, 698, 1471
TfiI	GAWTC	5 cut(s)	252, 342, 466, 557, 642
Tru1I	TTAA	1 cut(s)	1343
Tru9I	TTAA	1 cut(s)	1343
TscAI	CASTG	1 cut(s)	623
TseFI	GTSAC	2 cut(s)	358, 859
TseI	GCWGC	3 cut(s)	304, 826, 1287
Tsp45I	GTSAC	2 cut(s)	358, 859
TspDTI	ATGAA	3 cut(s)	163, 291, 1439
TspGWI	ACGGA	7 cut(s)	321, 412, 479, 655, 847, 970, 1071
TspMI	CCCGGG	1 cut(s)	565
TspRI	CASTG	1 cut(s)	623
Van91I	CCANNNNNTGG	1 cut(s)	1213
VpaK11BI	GGWCC	9 cut(s)	113, 163, 184, 621, 904, 912, 1105, 1151, 1249
XceI	RCATGY	1 cut(s)	1306
XhoI	CTCGAG	1 cut(s)	139
XmaI	CCCGGG	1 cut(s)	565
XmiI	GTMKAC	2 cut(s)	990, 1010
XspI	CTAG	1 cut(s)	1492
ZraI	GACGTC	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.