Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015476

Physical Location & Seq

Genomic Coordinates Reverse (-)

3000714 .. 3003454

Gene Structure 2741 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G09780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGAAACCCGTTGCTCTCTCCTCTTTCTCTCTCTCATTCTCCTGTATTTGCCCAAACCCGGATCCGGATTTGGATCCTCCGGTCCGATTGCGGCGTCGTTCGGCGGCTCTGCTTTCTTCTGCGCCATTGACGCTAGTGGTCGTCAAGATGTTATCTGCTGGGGAAAGAACTATTCATCTCCTTCTTCTCCCTCTTCTTCTTCTTCTTCGTCGTCTATTGCTTCTTCCACTTCCGCAAGCTACAACATTCCGTCAATGGCGGTTCTTTCAGGCGGAGACGGGTTTCTCTGCGGCATTTTGTCGAACACTTCTCAAGCATTCTGTTTTAGTTCACTTGGGTCTTCTTCAGGTATGGATCTTGTCCCTCTAGCTTACAGGACTACTGCTTACTCTCAGATAGCTGCTGGAAACAGCCATGTCTGTGCTGTTAGAGGAGCTTACTATTCCGATCACGATTCTGGGACTATCGATTGTTGGGAGATAACTAGAGCTACGAACAACAACAGCTTAATCGCCAAGGAGAATCCTAACTTCTATGATCAGATTGTTAGTAATCTCGTCTTCAACAATATTGTTTCTGGTGATGGGTTTAGCTGTGGTGGAATCAGAGATGGTGGGATGCTCTGTTTTGGTCCCAATTCTTCTAATTTAGGGTTTAACACAACTTCTGATAACTTCCAAGTCTTAGCCGCCGGTAAAAACTCCGTTTGTGCTATTCTTAATTTATCTCGAGAGGTTAAATGTTGGGGAGAAGATGAATCTTTTGTCAATTCTCCGATGAATGATTCTCGATTCGTCTCGCTAACCGCGGGTCCTCGCCATTTCTGCGGAATCCGTGAGGATAATCATGAGGTTGAGTGTTGGGGAAACTCTAATTTCTCTTTGATTCCAAAAGGTTCTGGATTTAAAGCAATAGCTTCGTCTGATTTCATTGTTTGTGGTATTAGAGAAGAGGATCTTGTTCTTGATTGTTGGATGGTTAATGGTTCGTCCACATTAGCTTACGATCCTCCGTTAGAGCTCTGCAGTCCAGGGATGTGTAGAGCTGGTCCTTGTAATGAAAAAGAGTTTGCTTTCAACGCAAGTATACTCAATGAACCTGACCTAACGAGTTTGTGTGTAAGGAAAGAGTTAATGGTCTGTTCACCTTGCGGCTCGGATTGCTCTCACGGATTCTTCTTGTCAAGTTCGTGCACCGCGAACTCTGATCGGATATGTACGCCTTGCTCGCTCTGTCAAAACAGTTCTTGTTCGGATATATGTAAGCTTCATAACAGCAATTTTCCAGATAAGCATTGGCATCAACTACAGAGACTTGTTCTTATCATCGGGTCTTGCGCATCCGCTCTATTGATCATTATAATTGGTTGCTGTGTTGTGCCACGGATTGTCACTAGTCCTAATAAAGAAGACGGAGCAGCGAATCAATTCAAATCTTGCATAGGAAAGCCCGATTTAGACACTGATCAGCCACTTGAAAATGTATCCCCTGCTCCATCGGTAACGCCTTTTGCTCAAGTGTTTAGACTCTCTGAGCTTAAAGACGCGACCAACGGGTTTAAAGAGTTCAATGAGTTAGGCAGAGGAAGCTATGGGTTTGTCTACAAAGCCGTGTTGGCGGACGGGAGGCAAGTAGCGGTTAAGAGAGCAAACGCAGCAACCATAATCCACACAAACACTAGAGAATTCGAGACAGAATTGGAGATTCTCTGCAACATTAGGCATTGCAACATTGTGAATCTCCTTGGTTACTCTACCGAAATGGGAGAGAGGCTTCTTGTTTACGAGTACATGCCTCACGGTACGCTTCACGATCATCTGCACAGTGGGTTTTCGCCATTGAGTTGGAGCTTAAGGATCAAAATCGCTATGCAAACCGCAAAGGGTCTTGAGTATCTTCACAATGAAGCTGAGCCGAGAATCATTCATGGCGATGTGAAGTCTTCGAATGTACTATTGGACTCGGAATGGGTGGCGAGAGTTGCGGATTTCGGGCTCGTGACATCGTCGAACGAGAAGAATTTGGACATCAAAAGAGATGTTTATGACTTTGGAGTTGTGCTGTTAGAGATTTTAACCGGTAGGAAACGTTATGATAGGGACTGTGATCCGCCGGAGATTGTTGAATGGACGGTTCCGGTGATCAGAGAAGGCAAAGCGGCGGCGATTGTGGATACGTATATTGCGTTGCCGAGAAACGTGGAGCCGTTGTTGAAACTTGCTGACGTGGCAGAGTTGTGTGTACGGGAGGATCCGAATCAACAACCAACTATGTCGGAACTTGCGAATTGGTTGGAACATGTCGCAAGAGATGCATTGATCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr RCC1_2

Protein Analysis

775

Amino Acids

84.18

Weight (kDa)

5.15

Isoelectric Point (pI)

36.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	521 - 673	5.8e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	524 - 672	1.2e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09780
fragaria_vesca	FvH4_6g15770
malus_domestica	MD04G1098700.v1.1 MD12G1119400.v1.1
prunus_persica	Prupe.6G237300_v2.0.a1
pyrus_communis	pycom12g11840
rosa_chinensis	RchiOBHm_Chr3g0469481
rosa_laevigata	RLG00000024347
rosa_multiflora	Rmu_sc0004871.1_g000013
rosa_roxburghii	Rroxscaffold_6G00411820
rosa_rugosa	Rorug03G0102200
rosa_samantha	Rh3AG151100 Rh3BG174700 Rh3CG165800 Rh3DG200600
rosa_wichuraiana	Rw3G014270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1361
Acc16I	TGCGCA	1 cut(s)	1339
AccBSI	CCGCTC	1 cut(s)	1346
AccI	GTMKAC	2 cut(s)	1087, 1602
AccII	CGCG	3 cut(s)	809, 1199, 1547
AccIII	TCCGGA	1 cut(s)	65
AclI	AACGTT	1 cut(s)	2089
AcsI	RAATTY	2 cut(s)	1685, 2020
AcuI	CTGAAG	1 cut(s)	330
AcyI	GRCGYC	1 cut(s)	95
AfaI	GTAC	5 cut(s)	1219, 1790, 1804, 1953, 2244
AfiI	CCNNNNNNNGG	2 cut(s)	59, 65
AflII	CTTAAG	1 cut(s)	1852
AflIII	ACRYGT	1 cut(s)	2299
AgeI	ACCGGT	1 cut(s)	2078
AgsI	TTSAA	7 cut(s)	565, 1078, 1432, 1478, 1570, 2126, 2215
AhlI	ACTAGT	1 cut(s)	1394
AjiI	CACGTC	1 cut(s)	2227
AjnI	CCWGG	1 cut(s)	1030
AjuI	GAANNNNNNNTTGG	2 cut(s)	1940, 1972
Alw21I	GWGCWC	2 cut(s)	1023, 1196
Alw26I	GTCTC	4 cut(s)	270, 802, 1306, 1685
Alw44I	GTGCAC	1 cut(s)	1192
Ama87I	CYCGRG	1 cut(s)	729
Aor13HI	TCCGGA	1 cut(s)	65
ApaLI	GTGCAC	1 cut(s)	1192
ApeKI	GCWGC	3 cut(s)	401, 1418, 1655
ApoI	RAATTY	2 cut(s)	1685, 2020
AsiGI	ACCGGT	1 cut(s)	2078
Asp700I	GAANNNNTTC	1 cut(s)	1427
AspLEI	GCGC	2 cut(s)	125, 1340
AspS9I	GGNCC	4 cut(s)	83, 632, 812, 1049
AsuC2I	CCSGG	1 cut(s)	60
AsuHPI	GGTGA	3 cut(s)	593, 1137, 2152
AsuII	TTCGAA	1 cut(s)	1946
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	4 cut(s)	83, 632, 812, 1049
BaeGI	GKGCMC	1 cut(s)	1196
BamHI	GGATCC	3 cut(s)	62, 74, 2251
BanII	GRGCYC	2 cut(s)	1023, 1998
BauI	CACGAG	1 cut(s)	1997
BbsI	GAAGAC	4 cut(s)	333, 553, 1416, 1935
Bbv12I	GWGCWC	2 cut(s)	1023, 1196
BbvI	GCAGC	3 cut(s)	388, 1430, 1667
BccI	CCATC	4 cut(s)	578, 605, 970, 1504
BceAI	ACGGC	2 cut(s)	1595, 2191
BcgI	CGANNNNNNTGC	2 cut(s)	900, 934
BciT130I	CCWGG	1 cut(s)	1032
BciVI	GTATCC	2 cut(s)	1495, 2167
BclI	TGATCA	4 cut(s)	538, 1353, 1465, 2142
BcnI	CCSGG	1 cut(s)	60
BcoDI	GTCTC	4 cut(s)	270, 802, 1306, 1685
BcuI	ACTAGT	1 cut(s)	1394
BfaI	CTAG	6 cut(s)	135, 368, 486, 1395, 1680, 2326
BfmI	CTRYAG	2 cut(s)	1024, 1307
BfrI	CTTAAG	1 cut(s)	1852
BfuI	GTATCC	2 cut(s)	1495, 2167
BglI	GCCNNNNNGGC	1 cut(s)	1616
BlpI	GCTNAGC	1 cut(s)	1911
Bme1390I	CCNGG	2 cut(s)	60, 1032
Bme18I	GGWCC	4 cut(s)	83, 632, 812, 1049
BmeT110I	CYCGRG	1 cut(s)	729
BmgBI	CACGTC	1 cut(s)	2227
BmgT120I	GGNCC	4 cut(s)	83, 632, 812, 1049
BmiI	GGNNCC	7 cut(s)	64, 76, 634, 813, 2136, 2205, 2253
BmrFI	CCNGG	2 cut(s)	60, 1032
BmsI	GCATC	4 cut(s)	609, 1309, 1349, 2302
BpiI	GAAGAC	4 cut(s)	333, 553, 1416, 1935
Bpu1102I	GCTNAGC	1 cut(s)	1911
Bpu14I	TTCGAA	1 cut(s)	1946
BpuEI	CTTGAG	3 cut(s)	297, 1500, 1910
BpuMI	CCSGG	1 cut(s)	60
Bsa29I	ATCGAT	1 cut(s)	468
BsaAI	YACGTR	1 cut(s)	2178
BsaBI	GATNNNNATC	3 cut(s)	73, 1862, 2256
BsaHI	GRCGYC	1 cut(s)	95
BsaJI	CCNNGG	5 cut(s)	516, 807, 1031, 1382, 1744
BsaWI	WCCGGW	4 cut(s)	65, 80, 2078, 2137
BsaXI	ACNNNNNCTCC	2 cut(s)	2195, 2225
Bsc4I	CCNNNNNNNGG	2 cut(s)	59, 65
Bse118I	RCCGGY	2 cut(s)	692, 2078
Bse3DI	GCAATG	1 cut(s)	1723
Bse8I	GATNNNNATC	3 cut(s)	73, 1862, 2256
BseAI	TCCGGA	1 cut(s)	65
BseBI	CCWGG	1 cut(s)	1032
BseCI	ATCGAT	1 cut(s)	468
BseDI	CCNNGG	5 cut(s)	516, 807, 1031, 1382, 1744
BseGI	GGATG	4 cut(s)	624, 981, 1041, 1340
BseJI	GATNNNNATC	3 cut(s)	73, 1862, 2256
BseLI	CCNNNNNNNGG	2 cut(s)	59, 65
BseMI	GCAATG	1 cut(s)	1723
BseMII	CTCAG	3 cut(s)	407, 1524, 1902
BseRI	GAGGAG	2 cut(s)	11, 447
BseSI	GKGCMC	1 cut(s)	1196
BseXI	GCAGC	3 cut(s)	388, 1430, 1667
BseYI	CCCAGC	1 cut(s)	159
BsgI	GTGCAG	1 cut(s)	1805
Bsh1236I	CGCG	3 cut(s)	809, 1199, 1547
BshTI	ACCGGT	1 cut(s)	2078
BshVI	ATCGAT	1 cut(s)	468
BsiHKAI	GWGCWC	2 cut(s)	1023, 1196
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	7 cut(s)	60, 66, 81, 693, 2079, 2114, 2138
BslFI	GGGAC	4 cut(s)	347, 475, 618, 2114
BslI	CCNNNNNNNGG	2 cut(s)	59, 65
BsmAI	GTCTC	4 cut(s)	270, 802, 1306, 1685
BsmBI	CGTCTC	2 cut(s)	270, 802
BsmFI	GGGAC	4 cut(s)	347, 475, 618, 2114
BsmI	GAATGC	1 cut(s)	317
BsoBI	CYCGRG	1 cut(s)	729
Bsp119I	TTCGAA	1 cut(s)	1946
Bsp1286I	GDGCHC	3 cut(s)	1023, 1196, 1998
Bsp13I	TCCGGA	1 cut(s)	65
Bsp1720I	GCTNAGC	1 cut(s)	1911
BspCNI	CTCAG	3 cut(s)	406, 1525, 1903
BspDI	ATCGAT	1 cut(s)	468
BspEI	TCCGGA	1 cut(s)	65
BspFNI	CGCG	3 cut(s)	809, 1199, 1547
BspHI	TCATGA	1 cut(s)	847
BspLI	GGNNCC	7 cut(s)	64, 76, 634, 813, 2136, 2205, 2253
BspMAI	CTGCAG	1 cut(s)	1028
BspT104I	TTCGAA	1 cut(s)	1946
BspTI	CTTAAG	1 cut(s)	1852
BsrBI	CCGCTC	1 cut(s)	1346
BsrDI	GCAATG	1 cut(s)	1723
BsrFI	RCCGGY	2 cut(s)	692, 2078
BssAI	RCCGGY	2 cut(s)	692, 2078
BssECI	CCNNGG	5 cut(s)	516, 807, 1031, 1382, 1744
BssNAI	GTATAC	1 cut(s)	1088
BssNI	GRCGYC	1 cut(s)	95
BssSI	CACGAG	1 cut(s)	1997
BssT1I	CCWWGG	2 cut(s)	516, 1744
Bst1107I	GTATAC	1 cut(s)	1088
Bst2BI	CACGAG	1 cut(s)	1997
Bst2UI	CCWGG	1 cut(s)	1032
Bst4CI	ACNGT	5 cut(s)	1244, 1802, 1826, 2105, 2134
Bst6I	CTCTTC	2 cut(s)	199, 945
BstACI	GRCGYC	1 cut(s)	95
BstAFI	CTTAAG	1 cut(s)	1852
BstAPI	GCANNNNNTGC	1 cut(s)	2312
BstBAI	YACGTR	1 cut(s)	2178
BstBI	TTCGAA	1 cut(s)	1946
BstC8I	GCNNGC	2 cut(s)	238, 1229
BstDEI	CTNAG	4 cut(s)	393, 685, 1533, 1911
BstDSI	CCRYGG	2 cut(s)	807, 1382
BstF5I	GGATG	4 cut(s)	624, 981, 1041, 1340
BstFNI	CGCG	3 cut(s)	809, 1199, 1547
BstHHI	GCGC	2 cut(s)	125, 1340
BstMAI	GTCTC	4 cut(s)	270, 802, 1306, 1685
BstNI	CCWGG	1 cut(s)	1032
BstNSI	RCATGY	2 cut(s)	1795, 2303
BstSCI	CCNGG	2 cut(s)	58, 1030
BstSFI	CTRYAG	2 cut(s)	1024, 1307
BstSLI	GKGCMC	1 cut(s)	1196
BstSNI	TACGTA	1 cut(s)	2178
BstUI	CGCG	3 cut(s)	809, 1199, 1547
BstV1I	GCAGC	3 cut(s)	388, 1430, 1667
BstV2I	GAAGAC	4 cut(s)	333, 553, 1416, 1935
BstX2I	RGATCY	5 cut(s)	62, 74, 355, 955, 2251
BstXI	CCANNNNNNTGG	1 cut(s)	1845
BstYI	RGATCY	5 cut(s)	62, 74, 355, 955, 2251
BstZ17I	GTATAC	1 cut(s)	1088
Bsu15I	ATCGAT	1 cut(s)	468
BsuI	GTATCC	2 cut(s)	1495, 2167
BsuTUI	ATCGAT	1 cut(s)	468
BtgI	CCRYGG	2 cut(s)	807, 1382
BtgZI	GCGATG	1 cut(s)	1947
BtrI	CACGTC	1 cut(s)	2227
BtsCI	GGATG	4 cut(s)	624, 981, 1041, 1340
BtsIMutI	CAGTG	2 cut(s)	1461, 1831
Cac8I	GCNNGC	2 cut(s)	238, 1229
CciI	TCATGA	1 cut(s)	847
CfoI	GCGC	2 cut(s)	125, 1340
Cfr10I	RCCGGY	2 cut(s)	692, 2078
Cfr13I	GGNCC	4 cut(s)	83, 632, 812, 1049
Cfr42I	CCGCGG	1 cut(s)	810
ClaI	ATCGAT	1 cut(s)	468
CpoI	CGGWCCG	1 cut(s)	83
CseI	GACGC	3 cut(s)	84, 140, 1553
Csp6I	GTAC	5 cut(s)	1218, 1789, 1803, 1952, 2243
CspAI	ACCGGT	1 cut(s)	2078
CspI	CGGWCCG	1 cut(s)	83
CviAII	CATG	5 cut(s)	416, 848, 1792, 1928, 2300
CviQI	GTAC	5 cut(s)	1218, 1789, 1803, 1952, 2243
DdeI	CTNAG	4 cut(s)	393, 685, 1533, 1911
DraI	TTTAAA	2 cut(s)	907, 1561
Eam1104I	CTCTTC	2 cut(s)	199, 945
EarI	CTCTTC	2 cut(s)	199, 945
EciI	GGCGGA	3 cut(s)	288, 1634, 2100
Ecl136II	GAGCTC	1 cut(s)	1021
Eco105I	TACGTA	1 cut(s)	2178
Eco130I	CCWWGG	2 cut(s)	516, 1744
Eco24I	GRGCYC	2 cut(s)	1023, 1998
Eco47I	GGWCC	4 cut(s)	83, 632, 812, 1049
Eco53kI	GAGCTC	1 cut(s)	1021
Eco57I	CTGAAG	1 cut(s)	330
Eco88I	CYCGRG	1 cut(s)	729
EcoICRI	GAGCTC	1 cut(s)	1021
EcoO109I	RGGNCCY	1 cut(s)	812
EcoRI	GAATTC	1 cut(s)	1685
EcoRII	CCWGG	1 cut(s)	1030
EcoT14I	CCWWGG	2 cut(s)	516, 1744
EcoT22I	ATGCAT	1 cut(s)	2317
EcoT38I	GRGCYC	2 cut(s)	1023, 1998
ErhI	CCWWGG	2 cut(s)	516, 1744
Esp3I	CGTCTC	2 cut(s)	270, 802
FaeI	CATG	5 cut(s)	419, 851, 1795, 1931, 2303
FalI	AAGNNNNNCTT	2 cut(s)	942, 974
FaqI	GGGAC	4 cut(s)	347, 475, 618, 2114
FatI	CATG	5 cut(s)	415, 847, 1791, 1927, 2299
FauI	CCCGC	1 cut(s)	802
FbaI	TGATCA	4 cut(s)	538, 1353, 1465, 2142
FblI	GTMKAC	2 cut(s)	1087, 1602
FokI	GGATG	4 cut(s)	631, 988, 1048, 1327
FriOI	GRGCYC	2 cut(s)	1023, 1998
FspBI	CTAG	6 cut(s)	135, 368, 486, 1395, 1680, 2326
FspI	TGCGCA	1 cut(s)	1339
GlaI	GCGC	2 cut(s)	124, 1339
GsaI	CCCAGC	1 cut(s)	163
HapII	CCGG	7 cut(s)	60, 66, 81, 693, 2079, 2114, 2138
HgaI	GACGC	3 cut(s)	84, 140, 1553
HhaI	GCGC	2 cut(s)	125, 1340
Hin1I	GRCGYC	1 cut(s)	95
Hin1II	CATG	5 cut(s)	419, 851, 1795, 1931, 2303
Hin6I	GCGC	2 cut(s)	123, 1338
HinP1I	GCGC	2 cut(s)	123, 1338
HindIII	AAGCTT	1 cut(s)	1265
HpaII	CCGG	7 cut(s)	60, 66, 81, 693, 2079, 2114, 2138
HphI	GGTGA	3 cut(s)	593, 1137, 2152
Hpy166II	GTNNAC	8 cut(s)	332, 993, 1088, 1145, 1194, 1603, 1783, 2243
Hpy8I	GTNNAC	8 cut(s)	332, 993, 1088, 1145, 1194, 1603, 1783, 2243
Hpy99I	CGWCG	3 cut(s)	100, 214, 2011
HpyAV	CCTTC	2 cut(s)	192, 2144
HpyCH4III	ACNGT	5 cut(s)	1244, 1802, 1826, 2105, 2134
HpyCH4IV	ACGT	4 cut(s)	2089, 2177, 2199, 2226
HpyCH4V	TGCA	8 cut(s)	1026, 1194, 1440, 1713, 1728, 1822, 1873, 2315
HpyF3I	CTNAG	4 cut(s)	393, 685, 1533, 1911
HpySE526I	ACGT	4 cut(s)	2089, 2177, 2199, 2226
Hsp92I	GRCGYC	1 cut(s)	95
Hsp92II	CATG	5 cut(s)	419, 851, 1795, 1931, 2303
HspAI	GCGC	2 cut(s)	123, 1338
Kpn2I	TCCGGA	1 cut(s)	65
Ksp22I	TGATCA	4 cut(s)	538, 1353, 1465, 2142
KspI	CCGCGG	1 cut(s)	810
LmnI	GCTCC	5 cut(s)	434, 1415, 1498, 1848, 2203
Lsp1109I	GCAGC	3 cut(s)	388, 1430, 1667
LweI	GCATC	4 cut(s)	609, 1309, 1349, 2302
MaeI	CTAG	6 cut(s)	135, 368, 486, 1395, 1680, 2326
MaeII	ACGT	4 cut(s)	2089, 2177, 2199, 2226
MaeIII	GTNAC	4 cut(s)	1390, 1501, 1748, 1999
MbiI	CCGCTC	1 cut(s)	1346
MflI	RGATCY	5 cut(s)	62, 74, 355, 955, 2251
MhlI	GDGCHC	3 cut(s)	1023, 1196, 1998
MlyI	GAGTC	2 cut(s)	1521, 1955
MmeI	TCCRAC	4 cut(s)	953, 1826, 2256, 2274
Mph1103I	ATGCAT	1 cut(s)	2317
MroI	TCCGGA	1 cut(s)	65
MroXI	GAANNNNTTC	1 cut(s)	1427
MslI	CAYNNNNRTG	2 cut(s)	420, 1932
MspA1I	CMGCKG	1 cut(s)	809
MspCI	CTTAAG	1 cut(s)	1852
MspI	CCGG	7 cut(s)	60, 66, 81, 693, 2079, 2114, 2138
MspR9I	CCNGG	2 cut(s)	60, 1032
Mva1269I	GAATGC	1 cut(s)	317
MvaI	CCWGG	1 cut(s)	1032
MvnI	CGCG	3 cut(s)	809, 1199, 1547
NciI	CCSGG	1 cut(s)	60
NlaIII	CATG	5 cut(s)	419, 851, 1795, 1931, 2303
NlaIV	GGNNCC	7 cut(s)	64, 76, 634, 813, 2136, 2205, 2253
NmeAIII	GCCGAG	2 cut(s)	1941, 2217
NmuCI	GTSAC	2 cut(s)	1390, 1999
NsbI	TGCGCA	1 cut(s)	1339
NsiI	ATGCAT	1 cut(s)	2317
NspI	RCATGY	2 cut(s)	1795, 2303
NspV	TTCGAA	1 cut(s)	1946
PaeR7I	CTCGAG	1 cut(s)	729
PagI	TCATGA	1 cut(s)	847
PciI	ACATGT	1 cut(s)	2299
PcsI	WCGNNNNNNNCGW	3 cut(s)	1196, 2183, 2282
PctI	GAATGC	1 cut(s)	317
PdmI	GAANNNNTTC	1 cut(s)	1427
PflFI	GACNNNGTC	1 cut(s)	2005
PinAI	ACCGGT	1 cut(s)	2078
PleI	GAGTC	2 cut(s)	1521, 1955
PpsI	GAGTC	2 cut(s)	1521, 1955
Ppu21I	YACGTR	1 cut(s)	2178
PpuMI	RGGWCCY	1 cut(s)	812
PscI	ACATGT	1 cut(s)	2299
PsiI	TTATAA	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	1023
Psp1406I	AACGTT	1 cut(s)	2089
Psp5II	RGGWCCY	1 cut(s)	812
Psp6I	CCWGG	1 cut(s)	1030
PspFI	CCCAGC	1 cut(s)	159
PspGI	CCWGG	1 cut(s)	1030
PspN4I	GGNNCC	7 cut(s)	64, 76, 634, 813, 2136, 2205, 2253
PspPI	GGNCC	4 cut(s)	83, 632, 812, 1049
PspPPI	RGGWCCY	1 cut(s)	812
PstI	CTGCAG	1 cut(s)	1028
PsuI	RGATCY	5 cut(s)	62, 74, 355, 955, 2251
PsyI	GACNNNGTC	1 cut(s)	2005
RsaI	GTAC	5 cut(s)	1219, 1790, 1804, 1953, 2244
RsaNI	GTAC	5 cut(s)	1218, 1789, 1803, 1952, 2243
RseI	CAYNNNNRTG	2 cut(s)	420, 1932
Rsr2I	CGGWCCG	1 cut(s)	83
RsrII	CGGWCCG	1 cut(s)	83
SacI	GAGCTC	1 cut(s)	1023
SacII	CCGCGG	1 cut(s)	810
Sau96I	GGNCC	4 cut(s)	83, 632, 812, 1049
SchI	GAGTC	2 cut(s)	1521, 1955
ScrFI	CCNGG	2 cut(s)	60, 1032
SduI	GDGCHC	3 cut(s)	1023, 1196, 1998
SfaNI	GCATC	4 cut(s)	609, 1309, 1349, 2302
SfcI	CTRYAG	2 cut(s)	1024, 1307
Sfr274I	CTCGAG	1 cut(s)	729
Sfr303I	CCGCGG	1 cut(s)	810
SfuI	TTCGAA	1 cut(s)	1946
SgrBI	CCGCGG	1 cut(s)	810
SinI	GGWCC	4 cut(s)	83, 632, 812, 1049
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	2 cut(s)	420, 1932
SmlI	CTYRAG	5 cut(s)	312, 729, 1515, 1852, 1889
SmoI	CTYRAG	5 cut(s)	312, 729, 1515, 1852, 1889
SnaBI	TACGTA	1 cut(s)	2178
SpeI	ACTAGT	1 cut(s)	1394
SspI	AATATT	1 cut(s)	571
SspMI	CTAG	6 cut(s)	135, 368, 486, 1395, 1680, 2326
SstI	GAGCTC	1 cut(s)	1023
StyD4I	CCNGG	2 cut(s)	58, 1030
StyI	CCWWGG	2 cut(s)	516, 1744
TaaI	ACNGT	5 cut(s)	1244, 1802, 1826, 2105, 2134
TaiI	ACGT	4 cut(s)	2092, 2180, 2202, 2229
TaqI	TCGA	7 cut(s)	302, 468, 730, 790, 1689, 1946, 2009
TatI	WGTACW	2 cut(s)	1788, 1951
TauI	GCSGC	7 cut(s)	95, 108, 294, 692, 1155, 2162, 2165
TscAI	CASTG	2 cut(s)	1468, 1831
TseFI	GTSAC	2 cut(s)	1390, 1999
TseI	GCWGC	3 cut(s)	401, 1418, 1655
Tsp45I	GTSAC	2 cut(s)	1390, 1999
TspDTI	ATGAA	9 cut(s)	165, 771, 794, 919, 1074, 1110, 1259, 1916, 1920
TspGWI	ACGGA	7 cut(s)	240, 694, 824, 1002, 1185, 1399, 1428
TspRI	CASTG	2 cut(s)	1468, 1831
Tth111I	GACNNNGTC	1 cut(s)	2005
Vha464I	CTTAAG	1 cut(s)	1852
VneI	GTGCAC	1 cut(s)	1192
VpaK11BI	GGWCC	4 cut(s)	83, 632, 812, 1049
XapI	RAATTY	2 cut(s)	1685, 2020
XceI	RCATGY	2 cut(s)	1795, 2303
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1293
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	2 cut(s)	1087, 1602
XmnI	GAANNNNTTC	1 cut(s)	1427
XspI	CTAG	6 cut(s)	135, 368, 486, 1395, 1680, 2326
Zsp2I	ATGCAT	1 cut(s)	2317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.