MD04G1098700.v1.1

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
18382866 .. 18384251
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1098700.v1.1.491

Sequence Viewer

Length: 1257 bp
ATGCAAACCCAGCAAACCATTTGTGGGTTCTCTCGATCCGTACCTCCTCTGCTCCTCCTCCTGCTCTTATGCTCCACCACCGCTTCTGGGTTCGGATTAATGGGACCCATCTCGGCCTCTTTCGGCAAAGACGGCTTCTTTTGCTTCATAGACGCCAGTGGCAAGCAGGACGTGGTTTGCTGGGGAAAGAACAGCTCTTCATCGACGCTGTCTTCGGCGTCTTCATCGTCCTCAGCCTCTTTCGGAAATATTCCGGCGATGGCTGCCCTCTCCGGCGGTGAAGATTTTCTTTGTGGTATTTTGGCTAACACCTCGCTGGCGTATTGTTGGAGCTCCGTTTCTCCAGGTATAGATGTTCCTCCCGTATTCAAGTCCACTGCTTACTCTCATATTGCTGCTGGGAAGAGCCATGTCTGTGCTATTAGAGGGTCGTATTACTCTGATCACGAATTTGGAACAGCAATTACCAATCTTGTGTTCAAAACGGTTGTTTCTGGTGAAGGGTTTAGCTGTGGGGGTGTTAGAGATGGAGGGCTGATTTGTTGGGGACCGAATTCTTCGAATTTAGGCGTTTCGGGTTCGCTACAGAATTTCACAGCTTTAGCTTCAGGAAGGGCTCAATCTGCGGAGTTTCAGATTTTGTATGTGTCTTTGGCAGCTGGTGATCACCATTTTTGTGGGATTCGACACGACAATCATAGAGTTAAGTGTTGGGGCATGTTTAACTCCTCCTTGATTCCAAAGACTTCTGGGTTTTTGGCGATTGCCTCATCGGATTATACCACTTGTGGGATCAGGGAAGATGATTTGGTGATTGATTGTTGGGATGCCAATGCAACTTCATCCCCGCCGGCGTATGATCCTCCATTGGAATTGTGCAGTCCAGGTCTTTGCACTCGTGGTTCTTGTGGCCAAGGGGAGTTTGCTTTCAATGCTAGCATACTCAATGAGGTGGATTTGACAAGCTTGTGTGTTCGAAAAGATCTCACGATTTGTTCCTCGTGCGGGTCAAATTGTTCCGAAGGATTCTTCTTGTCTAGTTCATGTAGTGAACATGCTGATCGAGTGTGCACAGCTTTCTCTCTTTGCCAAAACAGCTCTTGTTGGGATATTTGTGGGCTTCAAACTCCTCCAGAAATGAGGAAGAAGCTTTGGAATCATGTGCGTAGGTTGGTGATCATATTCGGGTCTTCTGCTTTGGGGTTTTTGTTGATATTAACTTGTTGGTGCCTTCTTCCCCATTTAACAACTTCTTGA

Protein Analysis

419

Amino Acids

44.21

Weight (kDa)

5.9

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09780
fragaria_vesca FvH4_6g15770
malus_domestica MD04G1098700.v1.1 MD12G1119400.v1.1
prunus_persica Prupe.6G237300_v2.0.a1
pyrus_communis pycom12g11840
rosa_chinensis RchiOBHm_Chr3g0469481
rosa_laevigata RLG00000024347
rosa_multiflora Rmu_sc0004871.1_g000013
rosa_roxburghii Rroxscaffold_6G00411820
rosa_rugosa Rorug03G0102200
rosa_samantha Rh3AG151100 Rh3BG174700 Rh3CG165800 Rh3DG200600
rosa_wichuraiana Rw3G014270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1227
AciI CCGC 5 cut(s) 81, 276, 626, 848, 1005
AclWI GGATC 3 cut(s) 30, 800, 854
AcoI YGGCCR 1 cut(s) 910
AcsI RAATTY 4 cut(s) 449, 553, 562, 589
AcuI CTGAAG 1 cut(s) 591
AcyI GRCGYC 2 cut(s) 153, 218
AfaI GTAC 1 cut(s) 42
AfiI CCNNNNNNNGG 4 cut(s) 24, 87, 789, 1005
AgsI TTSAA 4 cut(s) 370, 481, 931, 1124
AjiI CACGTC 1 cut(s) 172
AjnI CCWGG 2 cut(s) 343, 883
AjuI GAANNNNNNNTTGG 2 cut(s) 461, 493
Alw21I GWGCWC 2 cut(s) 335, 1073
Alw44I GTGCAC 1 cut(s) 1069
AlwI GGATC 3 cut(s) 30, 800, 854
AoxI GGCC 2 cut(s) 114, 910
ApaLI GTGCAC 1 cut(s) 1069
ApeKI GCWGC 3 cut(s) 263, 395, 656
ApoI RAATTY 4 cut(s) 449, 553, 562, 589
ArsI GACNNNNNNTTYG 2 cut(s) 196, 228
AseI ATTAAT 1 cut(s) 98
Asp700I GAANNNNTTC 1 cut(s) 285
AspS9I GGNCC 2 cut(s) 104, 548
AsuHPI GGTGA 6 cut(s) 290, 509, 659, 674, 823, 1186
AsuII TTCGAA 2 cut(s) 560, 976
AsuNHI GCTAGC 1 cut(s) 935
AvaII GGWCC 2 cut(s) 104, 548
BaeGI GKGCMC 1 cut(s) 1073
BalI TGGCCA 1 cut(s) 912
BanI GGYRCC 1 cut(s) 1227
BanII GRGCYC 2 cut(s) 335, 619
BauI CACGAG 2 cut(s) 897, 1000
BbsI GAAGAC 3 cut(s) 204, 213, 1182
Bbv12I GWGCWC 2 cut(s) 335, 1073
BbvCI CCTCAGC 1 cut(s) 232
BbvI GCAGC 3 cut(s) 250, 382, 668
BccI CCATC 3 cut(s) 116, 253, 521
BceAI ACGGC 1 cut(s) 148
BciT130I CCWGG 2 cut(s) 345, 885
BclI TGATCA 3 cut(s) 442, 664, 1176
BfaI CTAG 2 cut(s) 936, 1038
BfmI CTRYAG 1 cut(s) 584
BglII AGATCT 1 cut(s) 982
BisI GCNGC 3 cut(s) 264, 396, 657
BlsI GCNGC 3 cut(s) 265, 397, 658
Bme1390I CCNGG 2 cut(s) 345, 885
Bme18I GGWCC 2 cut(s) 104, 548
BmgBI CACGTC 1 cut(s) 172
BmgT120I GGNCC 2 cut(s) 104, 548
BmiI GGNNCC 4 cut(s) 105, 106, 549, 1229
BmrFI CCNGG 2 cut(s) 345, 885
BmsI GCATC 1 cut(s) 817
BmtI GCTAGC 1 cut(s) 939
BpiI GAAGAC 3 cut(s) 204, 213, 1182
BpmI CTGGAG 2 cut(s) 327, 1116
Bpu10I CCTNAGC 1 cut(s) 232
Bpu14I TTCGAA 2 cut(s) 560, 976
BsaHI GRCGYC 2 cut(s) 153, 218
BsaJI CCNNGG 1 cut(s) 913
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 87, 789, 1005
Bse118I RCCGGY 1 cut(s) 850
Bse1I ACTGG 1 cut(s) 156
BseBI CCWGG 2 cut(s) 345, 885
BseDI CCNNGG 1 cut(s) 913
BseGI GGATG 2 cut(s) 832, 842
BseLI CCNNNNNNNGG 4 cut(s) 24, 87, 789, 1005
BseMII CTCAG 1 cut(s) 246
BseNI ACTGG 1 cut(s) 156
BseRI GAGGAG 5 cut(s) 36, 44, 47, 718, 1119
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 3 cut(s) 250, 382, 668
BseYI CCCAGC 3 cut(s) 9, 180, 398
BsgI GTGCAG 1 cut(s) 898
BshFI GGCC 2 cut(s) 116, 912
BshNI GGYRCC 1 cut(s) 1227
BsiHKAI GWGCWC 2 cut(s) 335, 1073
BsiSI CCGG 3 cut(s) 254, 273, 851
BslFI GGGAC 2 cut(s) 117, 561
BslI CCNNNNNNNGG 4 cut(s) 24, 87, 789, 1005
BsmFI GGGAC 2 cut(s) 117, 561
BsnI GGCC 2 cut(s) 116, 912
Bsp119I TTCGAA 2 cut(s) 560, 976
Bsp1286I GDGCHC 3 cut(s) 335, 619, 1073
Bsp143I GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
BspACI CCGC 5 cut(s) 81, 276, 626, 848, 1005
BspANI GGCC 2 cut(s) 116, 912
BspCNI CTCAG 1 cut(s) 245
BspLI GGNNCC 4 cut(s) 105, 106, 549, 1229
BspOI GCTAGC 1 cut(s) 939
BspPI GGATC 3 cut(s) 30, 800, 854
BspQI GCTCTTC 2 cut(s) 202, 398
BspT104I TTCGAA 2 cut(s) 560, 976
BspT107I GGYRCC 1 cut(s) 1227
BsrFI RCCGGY 1 cut(s) 850
BsrI ACTGG 1 cut(s) 156
BssAI RCCGGY 1 cut(s) 850
BssECI CCNNGG 1 cut(s) 913
BssMI GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
BssNI GRCGYC 2 cut(s) 153, 218
BssSI CACGAG 2 cut(s) 897, 1000
BssT1I CCWWGG 1 cut(s) 913
Bst2BI CACGAG 2 cut(s) 897, 1000
Bst2UI CCWGG 2 cut(s) 345, 885
Bst4CI ACNGT 1 cut(s) 487
Bst6I CTCTTC 2 cut(s) 202, 398
BstACI GRCGYC 2 cut(s) 153, 218
BstBI TTCGAA 2 cut(s) 560, 976
BstC8I GCNNGC 4 cut(s) 164, 318, 852, 937
BstDEI CTNAG 1 cut(s) 232
BstF5I GGATG 2 cut(s) 832, 842
BstKTI GATC 8 cut(s) 38, 445, 667, 795, 862, 985, 1063, 1179
BstMBI GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
BstMWI GCNNNNNNNGC 7 cut(s) 10, 132, 141, 263, 623, 932, 1095
BstNI CCWGG 2 cut(s) 345, 885
BstNSI RCATGY 2 cut(s) 721, 1058
BstSCI CCNGG 2 cut(s) 343, 883
BstSFI CTRYAG 1 cut(s) 584
BstSLI GKGCMC 1 cut(s) 1073
BstV1I GCAGC 3 cut(s) 250, 382, 668
BstV2I GAAGAC 3 cut(s) 204, 213, 1182
BstX2I RGATCY 1 cut(s) 982
BstXI CCANNNNNNTGG 1 cut(s) 677
BstYI RGATCY 1 cut(s) 982
BsuRI GGCC 2 cut(s) 116, 912
BtgZI GCGATG 1 cut(s) 272
BtrI CACGTC 1 cut(s) 172
BtsCI GGATG 2 cut(s) 832, 842
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 2 cut(s) 163, 375
Cac8I GCNNGC 4 cut(s) 164, 318, 852, 937
Cfr10I RCCGGY 1 cut(s) 850
Cfr13I GGNCC 2 cut(s) 104, 548
CseI GACGC 3 cut(s) 161, 207, 214
Csp6I GTAC 1 cut(s) 41
CviAII CATG 5 cut(s) 410, 718, 1044, 1055, 1160
CviQI GTAC 1 cut(s) 41
DdeI CTNAG 1 cut(s) 232
DpnI GATC 8 cut(s) 37, 444, 666, 794, 861, 984, 1062, 1178
DpnII GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
EaeI YGGCCR 1 cut(s) 910
Eam1104I CTCTTC 2 cut(s) 202, 398
EarI CTCTTC 2 cut(s) 202, 398
Ecl136II GAGCTC 1 cut(s) 333
Eco130I CCWWGG 1 cut(s) 913
Eco24I GRGCYC 2 cut(s) 335, 619
Eco47I GGWCC 2 cut(s) 104, 548
Eco53kI GAGCTC 1 cut(s) 333
Eco57I CTGAAG 1 cut(s) 591
EcoICRI GAGCTC 1 cut(s) 333
EcoO109I RGGNCCY 1 cut(s) 104
EcoRI GAATTC 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 343, 883
EcoT14I CCWWGG 1 cut(s) 913
EcoT38I GRGCYC 2 cut(s) 335, 619
ErhI CCWWGG 1 cut(s) 913
FaeI CATG 5 cut(s) 413, 721, 1047, 1058, 1163
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FaqI GGGAC 2 cut(s) 117, 561
FatI CATG 5 cut(s) 409, 717, 1043, 1054, 1159
FauI CCCGC 2 cut(s) 855, 998
FbaI TGATCA 3 cut(s) 442, 664, 1176
Fnu4HI GCNGC 3 cut(s) 264, 396, 657
FokI GGATG 2 cut(s) 829, 839
FriOI GRGCYC 2 cut(s) 335, 619
Fsp4HI GCNGC 3 cut(s) 264, 396, 657
FspBI CTAG 2 cut(s) 936, 1038
GluI GCNGC 3 cut(s) 264, 396, 657
GsaI CCCAGC 3 cut(s) 13, 184, 402
GsuI CTGGAG 2 cut(s) 327, 1116
HaeIII GGCC 2 cut(s) 116, 912
HapII CCGG 3 cut(s) 254, 273, 851
HgaI GACGC 3 cut(s) 161, 207, 214
Hin1I GRCGYC 2 cut(s) 153, 218
Hin1II CATG 5 cut(s) 413, 721, 1047, 1058, 1163
HindIII AAGCTT 2 cut(s) 964, 1148
HinfI GANTC 4 cut(s) 682, 736, 1026, 1156
HpaII CCGG 3 cut(s) 254, 273, 851
HphI GGTGA 6 cut(s) 290, 509, 659, 674, 823, 1186
Hpy166II GTNNAC 3 cut(s) 375, 1052, 1071
Hpy188I TCNGA 6 cut(s) 95, 245, 442, 636, 775, 1021
Hpy188III TCNNGA 6 cut(s) 33, 446, 609, 988, 1133, 1254
Hpy8I GTNNAC 3 cut(s) 375, 1052, 1071
Hpy99I CGWCG 1 cut(s) 208
HpyAV CCTTC 4 cut(s) 494, 606, 1016, 1241
HpyCH4III ACNGT 1 cut(s) 487
HpyCH4IV ACGT 1 cut(s) 171
HpyCH4V TGCA 5 cut(s) 4, 836, 879, 894, 1071
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 132, 141, 263, 623, 932, 1095
HpyF3I CTNAG 1 cut(s) 232
HpySE526I ACGT 1 cut(s) 171
Hsp92I GRCGYC 2 cut(s) 153, 218
Hsp92II CATG 5 cut(s) 413, 721, 1047, 1058, 1163
KflI GGGWCCC 1 cut(s) 104
KroI GCCGGC 1 cut(s) 850
KroNI GCCGGC 1 cut(s) 852
Ksp22I TGATCA 3 cut(s) 442, 664, 1176
Kzo9I GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
LguI GCTCTTC 2 cut(s) 202, 398
LmnI GCTCC 4 cut(s) 57, 77, 330, 338
Lsp1109I GCAGC 3 cut(s) 250, 382, 668
LweI GCATC 1 cut(s) 817
MaeI CTAG 2 cut(s) 936, 1038
MaeII ACGT 1 cut(s) 171
MalI GATC 8 cut(s) 37, 444, 666, 794, 861, 984, 1062, 1178
MboI GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
MflI RGATCY 1 cut(s) 982
MhlI GDGCHC 3 cut(s) 335, 619, 1073
MlsI TGGCCA 1 cut(s) 912
MluCI AATT 7 cut(s) 449, 462, 553, 562, 589, 872, 1012
MluNI TGGCCA 1 cut(s) 912
MmeI TCCRAC 1 cut(s) 308
Mox20I TGGCCA 1 cut(s) 912
MreI CGCCGGCG 1 cut(s) 850
MroNI GCCGGC 1 cut(s) 850
MroXI GAANNNNTTC 1 cut(s) 285
MscI TGGCCA 1 cut(s) 912
MseI TTAA 5 cut(s) 98, 705, 723, 1217, 1244
MslI CAYNNNNRTG 2 cut(s) 414, 675
Msp20I TGGCCA 1 cut(s) 912
MspA1I CMGCKG 1 cut(s) 659
MspI CCGG 3 cut(s) 254, 273, 851
MspR9I CCNGG 2 cut(s) 345, 885
MvaI CCWGG 2 cut(s) 345, 885
MwoI GCNNNNNNNGC 7 cut(s) 10, 132, 141, 263, 623, 932, 1095
NaeI GCCGGC 1 cut(s) 852
NdeII GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
NgoMIV GCCGGC 1 cut(s) 850
NheI GCTAGC 1 cut(s) 935
NlaIII CATG 5 cut(s) 413, 721, 1047, 1058, 1163
NlaIV GGNNCC 4 cut(s) 105, 106, 549, 1229
NmeAIII GCCGAG 1 cut(s) 92
NspI RCATGY 2 cut(s) 721, 1058
NspV TTCGAA 2 cut(s) 560, 976
PciSI GCTCTTC 2 cut(s) 202, 398
PdiI GCCGGC 1 cut(s) 852
PdmI GAANNNNTTC 1 cut(s) 285
PfeI GAWTC 4 cut(s) 682, 736, 1026, 1156
PflFI GACNNNGTC 1 cut(s) 208
PkrI GCNGC 3 cut(s) 265, 397, 658
PpuMI RGGWCCY 1 cut(s) 104
PshBI ATTAAT 1 cut(s) 98
Psp124BI GAGCTC 1 cut(s) 335
Psp5II RGGWCCY 1 cut(s) 104
Psp6I CCWGG 2 cut(s) 343, 883
PspFI CCCAGC 3 cut(s) 9, 180, 398
PspGI CCWGG 2 cut(s) 343, 883
PspN4I GGNNCC 4 cut(s) 105, 106, 549, 1229
PspPI GGNCC 2 cut(s) 104, 548
PspPPI RGGWCCY 1 cut(s) 104
PsrI GAACNNNNNNTAC 2 cut(s) 448, 480
PsuI RGATCY 1 cut(s) 982
PsyI GACNNNGTC 1 cut(s) 208
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 1 cut(s) 42
RsaNI GTAC 1 cut(s) 41
RseI CAYNNNNRTG 2 cut(s) 414, 675
SacI GAGCTC 1 cut(s) 335
SapI GCTCTTC 2 cut(s) 202, 398
SaqAI TTAA 5 cut(s) 98, 705, 723, 1217, 1244
SatI GCNGC 3 cut(s) 264, 396, 657
Sau3AI GATC 8 cut(s) 35, 442, 664, 792, 859, 982, 1060, 1176
Sau96I GGNCC 2 cut(s) 104, 548
ScrFI CCNGG 2 cut(s) 345, 885
SduI GDGCHC 3 cut(s) 335, 619, 1073
SfaNI GCATC 1 cut(s) 817
SfcI CTRYAG 1 cut(s) 584
SfuI TTCGAA 2 cut(s) 560, 976
SgrAI CRCCGGYG 1 cut(s) 850
SinI GGWCC 2 cut(s) 104, 548
SmiMI CAYNNNNRTG 2 cut(s) 414, 675
Sse9I AATT 7 cut(s) 449, 462, 553, 562, 589, 872, 1012
SsiI CCGC 5 cut(s) 81, 276, 626, 848, 1005
SspI AATATT 1 cut(s) 250
SspMI CTAG 2 cut(s) 936, 1038
SstI GAGCTC 1 cut(s) 335
StyD4I CCNGG 2 cut(s) 343, 883
StyI CCWWGG 1 cut(s) 913
TaaI ACNGT 1 cut(s) 487
TaiI ACGT 1 cut(s) 174
TaqI TCGA 6 cut(s) 34, 203, 560, 685, 976, 1063
TaqII GACCGA 1 cut(s) 565
TasI AATT 7 cut(s) 449, 462, 553, 562, 589, 872, 1012
TfiI GAWTC 4 cut(s) 682, 736, 1026, 1156
Tru1I TTAA 5 cut(s) 98, 705, 723, 1217, 1244
Tru9I TTAA 5 cut(s) 98, 705, 723, 1217, 1244
TscAI CASTG 2 cut(s) 163, 382
TseI GCWGC 3 cut(s) 263, 395, 656
TspDTI ATGAA 5 cut(s) 136, 189, 213, 831, 1032
TspGWI ACGGA 2 cut(s) 28, 325
TspRI CASTG 2 cut(s) 163, 382
Tth111I GACNNNGTC 1 cut(s) 208
VneI GTGCAC 1 cut(s) 1069
VpaK11BI GGWCC 2 cut(s) 104, 548
VspI ATTAAT 1 cut(s) 98
XapI RAATTY 4 cut(s) 449, 553, 562, 589
XceI RCATGY 2 cut(s) 721, 1058
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 2 cut(s) 936, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.