Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0015476

Physical Location & Seq

Genomic Coordinates Reverse (-)

14121812 .. 14125105

Gene Structure 3294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG165800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGCAAACCCACCAAACCATTTCTGGGTTCTCTCAGTTCTTACTACTCTCTCTACTCCTACTTCTGTTCTTCAAAACTGCATCTGGGTTTGGATCAATGGGGCCAATCTCGGCCTCTTTCGGCGAAAGTGGGTTCTTCTGCGCTATAGATGCTAGCGGCAAGCAGGACGTGGTTTGTTGGGGCAAGAACAGCTCCGAGTCGACGCCGTCCTCCGCTTCTTTGCCTACTTCGCCGTCCTTTAGCGACATTCCGGCGATGGCTGCGCTCTCAGGCGGTGAAGGTTTTCTCTGCGGCATTTTAGCGAATACGTCGCAGGCGTATTGTTGGAGCTCCATTGCCCCAGGTATAGATCTCGTACCACCCACTTTACGGACCACCGCTTATGCTCATATTGCCGCCGGAAAGAGCCATGTCTGTGCCATCAGAGGTTCCTATTATTCTGATCACGATTTGGGTACAGTAGATTGTTGGGAGATTTATGAAACTGGGAATAATACTTTGAGTTCAAAACAGAGTACTCTGTTTTCTGACCAGTCAATCAGCAATCTTGCATTCAAAAAGGTTGTTTCTGGTGAAGGGTTCAGCTGTGGTGGTATTAGAGAGGGAGGGCTTATTTGCTGGGGACCCAATTCCTCTAACTTAGGGGTCTCTGGTGTAGTAGACAATTTCACAGCTTTAGCTTCAGGGAAGGCTTCACTGTGTGGAATTTCAGAGGTAACTGGTGAGGTTCAATGTTGGGGTGATTCTGATTTATTAGCTGGTCATCCAATTGACACCCAATATGTGGCATTGGCCTCCGGGGCTCGCCATTTTTGTGGGATTAGAGACGATAACCATGGAGTTGAGTGTTGGGGGATCTTCAACTCTTCTTTGGTTCCTAAAGGTCAAGGGTTTGTGGCAATTGCTTCGTCGGATTTTACTACTTGTGGGATAAGGGAGGATGATCTGTTGCTGGAATGTTGGGCTGCTAATGCAACTTCCTCACAGAAACCTGAGTATGATCCTCCATTGGAGTTGTGTAGTCCAGGTCTTTGTAGTCCTGGTTTCTGTGGAGTGGGGAAGTTTGCTTTCAATGTTAGTGTTCTTAATGAGGTGGATTTGACAAGCTTGTGTGTTCGAAACGATCTAACGATTTGTTCACCTTGTGGGTCTAATTGTTCTGAGGGGTACTTCTTGTCGAGTTCATGTACCCAACATGCTGATAGAGTGTGTACAGCTTGCTCTCTTTGCCAAAACAGCACTTGCAGAGATATTTGTGGGCTTCAAGCACCTCCAGAGATGAAGAGTAAGCTATGGCATCATATTTGGAGATTGGTGATCATATTTGGGTCTTGTGCTTTGGGTTTCTTGCTGATATCAATCAGTTGGTGCTTTCTTCCCCGTTTAACCACTTCCCGAAAGGAAGAAGGGACCAAGAAGCAGTTCAAGTCTTGCATTGGGAAGCCAGAGTTGGAAGCGGACAATAATGAAGATTCAGAAGCTCCTCTATCCGTTGTTCCATGTCCTGGGGTTGCTCAAGTGTTCAGACTCTCTGAACTAAAAGATGCAACCAATGGATTCAAGGAGTTTAATGAGGTTGGTAGGGGAAGCTATGGCTTTGTTTACAAAGCTGTTCTAGCAGAAGGGCAGCAAGTTGCAGTCAAGAGAGCAAATGCTGCCACTATAATTCACACCAACAGTAGGGACTTTGAAATGGAATTAGAAGTTCTTTGCAAAATTCGACACTGTAATATTGTGAACTTATTAGGTTACTGCTCAGAGATGGGGGAGAGGCTGCTCGTATACGAGTACATGCCCCATGGTACACTTTATGACCATCTCCATAGTGGTCTTTCTCCTCTAAACTGGGGCTTCCGGTTGAAAATTGCAATGCAGGCTGCAAAGGGGATCGAGTACCTTCACAAGGAATTTGTGCCTCCCATTGTCCACCGCGATGTGAAGACCTCAAATATTCTTTTGGATTCTGAATGGGGTGCAAGAATTGCAGATTTCGGGCTCCTTACTTCTAATGACAAGGATCTCGGTGGGGATTTGGAAAGTGATGTTTACAACTTCGGGATAGTACTGCTAGAGATTCTCAGTGGACGGAAAGCTTATGACAGAGATTACACTCCTCCAAGTATAGTCGAATGGGCATTGCCTTTAATAAAACAGAACAAAGCAGCTGCCATCATCGATCGTTATGTAACTCTTCCGAGAAATGTTGAACCATTGCTAAAACTTGCTGATATAGCAGGACTAGCTGTTAAGGAAAAGCCTAACGAGCGTCCTACCATGTCCGATATTGCATCTTGGTTGGAGCACATTGTGAAAGATGGTTTGACCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr RCC1_2

Protein Analysis

776

Amino Acids

83.92

Weight (kDa)

5.32

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	521 - 668	8.4e-30	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	524 - 670	1.1e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09780
fragaria_vesca	FvH4_6g15770
malus_domestica	MD04G1098700.v1.1 MD12G1119400.v1.1
prunus_persica	Prupe.6G237300_v2.0.a1
pyrus_communis	pycom12g11840
rosa_chinensis	RchiOBHm_Chr3g0469481
rosa_laevigata	RLG00000024347
rosa_multiflora	Rmu_sc0004871.1_g000013
rosa_roxburghii	Rroxscaffold_6G00411820
rosa_rugosa	Rorug03G0102200
rosa_samantha	Rh3AG151100 Rh3BG174700 Rh3CG165800 Rh3DG200600
rosa_wichuraiana	Rw3G014270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	784, 1505
AccI	GTMKAC	3 cut(s)	200, 660, 1782
AccII	CGCG	1 cut(s)	1932
AciI	CCGC	8 cut(s)	156, 213, 273, 291, 378, 396, 1457, 1930
AclWI	GGATC	5 cut(s)	100, 863, 995, 1895, 2025
AcsI	RAATTY	3 cut(s)	705, 1716, 1907
AcuI	CTGAAG	1 cut(s)	666
AcyI	GRCGYC	1 cut(s)	203
AdeI	CACNNNGTG	3 cut(s)	701, 1145, 2308
AfiI	CCNNNNNNNGG	6 cut(s)	24, 369, 784, 1505, 1680, 1903
AjiI	CACGTC	1 cut(s)	169
AjnI	CCWGG	4 cut(s)	340, 1024, 1039, 1504
AjuI	GAANNNNNNNTTGG	4 cut(s)	1406, 1433, 1438, 1465
Alw21I	GWGCWC	2 cut(s)	332, 2304
Alw26I	GTCTC	2 cut(s)	652, 819
AlwI	GGATC	5 cut(s)	100, 863, 995, 1895, 2025
AoxI	GGCC	3 cut(s)	101, 111, 792
ApeKI	GCWGC	8 cut(s)	260, 965, 1627, 1655, 1774, 1877, 2162, 2165
ApoI	RAATTY	3 cut(s)	705, 1716, 1907
Asp700I	GAANNNNTTC	2 cut(s)	282, 1421
AspLEI	GCGC	2 cut(s)	143, 265
AspS9I	GGNCC	4 cut(s)	101, 372, 623, 1410
AsuC2I	CCSGG	1 cut(s)	799
AsuHPI	GGTGA	6 cut(s)	287, 584, 734, 752, 1131, 1327
AsuII	TTCGAA	1 cut(s)	1117
AsuNHI	GCTAGC	1 cut(s)	152
AvaII	GGWCC	3 cut(s)	372, 623, 1410
BanII	GRGCYC	3 cut(s)	332, 805, 1998
BbsI	GAAGAC	1 cut(s)	1946
Bbv12I	GWGCWC	2 cut(s)	332, 2304
BbvI	GCAGC	8 cut(s)	247, 952, 1639, 1642, 1761, 1864, 2152, 2174
BccI	CCATC	6 cut(s)	250, 428, 1756, 1824, 2177, 2309
BceAI	ACGGC	2 cut(s)	190, 217
BcgI	CGANNNNNNTGC	2 cut(s)	888, 922
BciT130I	CCWGG	4 cut(s)	342, 1026, 1041, 1506
BclI	TGATCA	2 cut(s)	442, 1317
BcnI	CCSGG	1 cut(s)	799
BcoDI	GTCTC	2 cut(s)	652, 819
BfaI	CTAG	4 cut(s)	153, 1616, 2069, 2240
BfmI	CTRYAG	1 cut(s)	144
BglI	GCCNNNNNGGC	1 cut(s)	800
BglII	AGATCT	1 cut(s)	349
BmcAI	AGTACT	2 cut(s)	517, 2064
Bme1390I	CCNGG	5 cut(s)	342, 799, 1026, 1041, 1506
Bme18I	GGWCC	3 cut(s)	372, 623, 1410
BmgBI	CACGTC	1 cut(s)	169
BmgT120I	GGNCC	4 cut(s)	101, 372, 623, 1410
BmiI	GGNNCC	7 cut(s)	102, 430, 624, 625, 876, 1411, 1997
BmrFI	CCNGG	5 cut(s)	342, 799, 1026, 1041, 1506
BmrI	ACTGGG	2 cut(s)	495, 1855
BmsI	GCATC	5 cut(s)	89, 139, 1306, 1534, 2297
BmtI	GCTAGC	1 cut(s)	156
BmuI	ACTGGG	2 cut(s)	495, 1855
BpiI	GAAGAC	1 cut(s)	1946
BpmI	CTGGAG	1 cut(s)	1257
Bpu14I	TTCGAA	1 cut(s)	1117
BpuEI	CTTGAG	1 cut(s)	1500
BpuMI	CCSGG	1 cut(s)	799
Bsa29I	ATCGAT	1 cut(s)	2175
BsaBI	GATNNNNATC	1 cut(s)	1358
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	652
BsaJI	CCNNGG	5 cut(s)	340, 798, 835, 1505, 1798
BsaWI	WCCGGW	1 cut(s)	1854
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 369, 784, 1505, 1680, 1903
Bse1I	ACTGG	4 cut(s)	490, 532, 724, 1850
Bse3DI	GCAATG	4 cut(s)	333, 1875, 2135, 2210
Bse8I	GATNNNNATC	1 cut(s)	1358
BseBI	CCWGG	4 cut(s)	342, 1026, 1041, 1506
BseCI	ATCGAT	1 cut(s)	2175
BseDI	CCNNGG	5 cut(s)	340, 798, 835, 1505, 1798
BseGI	GGATG	2 cut(s)	763, 946
BseJI	GATNNNNATC	1 cut(s)	1358
BseLI	CCNNNNNNNGG	6 cut(s)	24, 369, 784, 1505, 1680, 1903
BseMI	GCAATG	4 cut(s)	333, 1875, 2135, 2210
BseMII	CTCAG	6 cut(s)	47, 282, 984, 1152, 1770, 2092
BseNI	ACTGG	4 cut(s)	490, 532, 724, 1850
BseRI	GAGGAG	3 cut(s)	1473, 1827, 2103
BseXI	GCAGC	8 cut(s)	247, 952, 1639, 1642, 1761, 1864, 2152, 2174
BseYI	CCCAGC	1 cut(s)	618
Bsh1236I	CGCG	1 cut(s)	1932
Bsh1285I	CGRYCG	1 cut(s)	2179
BshFI	GGCC	3 cut(s)	103, 113, 794
BshVI	ATCGAT	1 cut(s)	2175
BsiEI	CGRYCG	1 cut(s)	2179
BsiHKAI	GWGCWC	2 cut(s)	332, 2304
BsiSI	CCGG	4 cut(s)	251, 399, 798, 1855
BslFI	GGGAC	3 cut(s)	636, 1423, 1697
BslI	CCNNNNNNNGG	6 cut(s)	24, 369, 784, 1505, 1680, 1903
BsmAI	GTCTC	2 cut(s)	652, 819
BsmBI	CGTCTC	1 cut(s)	819
BsmFI	GGGAC	3 cut(s)	636, 1423, 1697
BsmI	GAATGC	1 cut(s)	551
BsnI	GGCC	3 cut(s)	103, 113, 794
Bso31I	GGTCTC	1 cut(s)	652
Bsp119I	TTCGAA	1 cut(s)	1117
Bsp1286I	GDGCHC	4 cut(s)	332, 805, 1998, 2304
Bsp1407I	TGTACA	1 cut(s)	1211
Bsp19I	CCATGG	2 cut(s)	835, 1798
BspACI	CCGC	8 cut(s)	156, 213, 273, 291, 378, 396, 1457, 1930
BspANI	GGCC	3 cut(s)	103, 113, 794
BspCNI	CTCAG	6 cut(s)	46, 281, 985, 1153, 1769, 2091
BspDI	ATCGAT	1 cut(s)	2175
BspFNI	CGCG	1 cut(s)	1932
BspLI	GGNNCC	7 cut(s)	102, 430, 624, 625, 876, 1411, 1997
BspOI	GCTAGC	1 cut(s)	156
BspPI	GGATC	5 cut(s)	100, 863, 995, 1895, 2025
BspT104I	TTCGAA	1 cut(s)	1117
BspTNI	GGTCTC	1 cut(s)	652
BsrDI	GCAATG	4 cut(s)	333, 1875, 2135, 2210
BsrGI	TGTACA	1 cut(s)	1211
BsrI	ACTGG	4 cut(s)	490, 532, 724, 1850
BssECI	CCNNGG	5 cut(s)	340, 798, 835, 1505, 1798
BssNAI	GTATAC	1 cut(s)	1783
BssNI	GRCGYC	1 cut(s)	203
BssT1I	CCWWGG	2 cut(s)	835, 1798
Bst1107I	GTATAC	1 cut(s)	1783
Bst2UI	CCWGG	4 cut(s)	342, 1026, 1041, 1506
Bst4CI	ACNGT	4 cut(s)	460, 699, 1679, 1727
Bst6I	CTCTTC	3 cut(s)	871, 1277, 2196
BstACI	GRCGYC	1 cut(s)	203
BstAPI	GCANNNNNTGC	2 cut(s)	1655, 1982
BstAUI	TGTACA	1 cut(s)	1211
BstBI	TTCGAA	1 cut(s)	1117
BstC8I	GCNNGC	6 cut(s)	154, 161, 315, 805, 1219, 1875
BstDEI	CTNAG	7 cut(s)	33, 268, 640, 993, 1161, 1756, 2078
BstDSI	CCRYGG	2 cut(s)	835, 1798
BstENI	CCTNNNNNAGG	1 cut(s)	1901
BstF5I	GGATG	2 cut(s)	763, 946
BstFNI	CGCG	1 cut(s)	1932
BstHHI	GCGC	2 cut(s)	143, 265
BstMAI	GTCTC	2 cut(s)	652, 819
BstMCI	CGRYCG	1 cut(s)	2179
BstNI	CCWGG	4 cut(s)	342, 1026, 1041, 1506
BstNSI	RCATGY	2 cut(s)	1199, 1795
BstSCI	CCNGG	5 cut(s)	340, 797, 1024, 1039, 1504
BstSFI	CTRYAG	1 cut(s)	144
BstUI	CGCG	1 cut(s)	1932
BstV1I	GCAGC	8 cut(s)	247, 952, 1639, 1642, 1761, 1864, 2152, 2174
BstV2I	GAAGAC	1 cut(s)	1946
BstX2I	RGATCY	3 cut(s)	349, 855, 2017
BstXI	CCANNNNNNTGG	1 cut(s)	815
BstYI	RGATCY	3 cut(s)	349, 855, 2017
BstZ17I	GTATAC	1 cut(s)	1783
Bsu15I	ATCGAT	1 cut(s)	2175
BsuRI	GGCC	3 cut(s)	103, 113, 794
BsuTUI	ATCGAT	1 cut(s)	2175
BtgI	CCRYGG	2 cut(s)	835, 1798
BtgZI	GCGATG	2 cut(s)	269, 1947
BtrI	CACGTC	1 cut(s)	169
BtsCI	GGATG	2 cut(s)	763, 946
BtsIMutI	CAGTG	3 cut(s)	695, 1723, 2086
Cac8I	GCNNGC	6 cut(s)	154, 161, 315, 805, 1219, 1875
CfoI	GCGC	2 cut(s)	143, 265
Cfr13I	GGNCC	4 cut(s)	101, 372, 623, 1410
ClaI	ATCGAT	1 cut(s)	2175
CseI	GACGC	2 cut(s)	211, 2255
CviAII	CATG	8 cut(s)	410, 836, 1185, 1196, 1500, 1792, 1799, 2275
DdeI	CTNAG	7 cut(s)	33, 268, 640, 993, 1161, 1756, 2078
DraIII	CACNNNGTG	3 cut(s)	701, 1145, 2308
Eam1104I	CTCTTC	3 cut(s)	871, 1277, 2196
EarI	CTCTTC	3 cut(s)	871, 1277, 2196
Ecl136II	GAGCTC	1 cut(s)	330
Eco130I	CCWWGG	2 cut(s)	835, 1798
Eco24I	GRGCYC	3 cut(s)	332, 805, 1998
Eco31I	GGTCTC	1 cut(s)	652
Eco32I	GATATC	1 cut(s)	1356
Eco47I	GGWCC	3 cut(s)	372, 623, 1410
Eco53kI	GAGCTC	1 cut(s)	330
Eco57I	CTGAAG	1 cut(s)	666
EcoICRI	GAGCTC	1 cut(s)	330
EcoNI	CCTNNNNNAGG	1 cut(s)	1901
EcoO109I	RGGNCCY	1 cut(s)	623
EcoRII	CCWGG	4 cut(s)	340, 1024, 1039, 1504
EcoRV	GATATC	1 cut(s)	1356
EcoT14I	CCWWGG	2 cut(s)	835, 1798
EcoT38I	GRGCYC	3 cut(s)	332, 805, 1998
ErhI	CCWWGG	2 cut(s)	835, 1798
Esp3I	CGTCTC	1 cut(s)	819
FaeI	CATG	8 cut(s)	413, 839, 1188, 1199, 1503, 1795, 1802, 2278
FaqI	GGGAC	3 cut(s)	636, 1423, 1697
FatI	CATG	8 cut(s)	409, 835, 1184, 1195, 1499, 1791, 1798, 2274
FbaI	TGATCA	2 cut(s)	442, 1317
FblI	GTMKAC	3 cut(s)	200, 660, 1782
FokI	GGATG	2 cut(s)	750, 953
FriOI	GRGCYC	3 cut(s)	332, 805, 1998
FspBI	CTAG	4 cut(s)	153, 1616, 2069, 2240
GlaI	GCGC	2 cut(s)	142, 264
GsaI	CCCAGC	1 cut(s)	622
GsuI	CTGGAG	1 cut(s)	1257
HaeIII	GGCC	3 cut(s)	103, 113, 794
HapII	CCGG	4 cut(s)	251, 399, 798, 1855
HgaI	GACGC	2 cut(s)	211, 2255
HhaI	GCGC	2 cut(s)	143, 265
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	8 cut(s)	413, 839, 1188, 1199, 1503, 1795, 1802, 2278
Hin6I	GCGC	2 cut(s)	141, 263
HinP1I	GCGC	2 cut(s)	141, 263
HincII	GTYRAC	1 cut(s)	201
HindII	GTYRAC	1 cut(s)	201
HindIII	AAGCTT	2 cut(s)	1105, 2091
HinfI	GANTC	7 cut(s)	197, 743, 1472, 1527, 1557, 1961, 2074
HpaII	CCGG	4 cut(s)	251, 399, 798, 1855
HphI	GGTGA	6 cut(s)	287, 584, 734, 752, 1131, 1327
Hpy188III	TCNNGA	5 cut(s)	446, 1274, 1395, 1642, 2056
Hpy99I	CGWCG	3 cut(s)	205, 313, 913
HpyAV	CCTTC	6 cut(s)	272, 569, 682, 1400, 1616, 1907
HpyCH4III	ACNGT	4 cut(s)	460, 699, 1679, 1727
HpyCH4IV	ACGT	2 cut(s)	168, 308
HpyF3I	CTNAG	7 cut(s)	33, 268, 640, 993, 1161, 1756, 2078
HpySE526I	ACGT	2 cut(s)	168, 308
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	8 cut(s)	413, 839, 1188, 1199, 1503, 1795, 1802, 2278
HspAI	GCGC	2 cut(s)	141, 263
KflI	GGGWCCC	1 cut(s)	623
Ksp22I	TGATCA	2 cut(s)	442, 1317
LmnI	GCTCC	6 cut(s)	197, 327, 335, 1486, 2001, 2299
Lsp1109I	GCAGC	8 cut(s)	247, 952, 1639, 1642, 1761, 1864, 2152, 2174
LweI	GCATC	5 cut(s)	89, 139, 1306, 1534, 2297
MaeI	CTAG	4 cut(s)	153, 1616, 2069, 2240
MaeII	ACGT	2 cut(s)	168, 308
MaeIII	GTNAC	3 cut(s)	715, 1748, 2185
MfeI	CAATTG	2 cut(s)	768, 900
MflI	RGATCY	3 cut(s)	349, 855, 2017
MhlI	GDGCHC	4 cut(s)	332, 805, 1998, 2304
MlyI	GAGTC	2 cut(s)	206, 1521
MmeI	TCCRAC	4 cut(s)	305, 891, 1431, 2277
MroXI	GAANNNNTTC	2 cut(s)	282, 1421
MseI	TTAA	5 cut(s)	1086, 1385, 1569, 2144, 2247
MslI	CAYNNNNRTG	3 cut(s)	414, 813, 1932
MspA1I	CMGCKG	2 cut(s)	585, 2165
MspI	CCGG	4 cut(s)	251, 399, 798, 1855
MspR9I	CCNGG	5 cut(s)	342, 799, 1026, 1041, 1506
MunI	CAATTG	2 cut(s)	768, 900
Mva1269I	GAATGC	1 cut(s)	551
MvaI	CCWGG	4 cut(s)	342, 1026, 1041, 1506
MvnI	CGCG	1 cut(s)	1932
NciI	CCSGG	1 cut(s)	799
NcoI	CCATGG	2 cut(s)	835, 1798
NheI	GCTAGC	1 cut(s)	152
NlaIII	CATG	8 cut(s)	413, 839, 1188, 1199, 1503, 1795, 1802, 2278
NlaIV	GGNNCC	7 cut(s)	102, 430, 624, 625, 876, 1411, 1997
NmeAIII	GCCGAG	1 cut(s)	89
NspI	RCATGY	2 cut(s)	1199, 1795
NspV	TTCGAA	1 cut(s)	1117
PcsI	WCGNNNNNNNCGW	1 cut(s)	314
PctI	GAATGC	1 cut(s)	551
PdmI	GAANNNNTTC	2 cut(s)	282, 1421
PfeI	GAWTC	5 cut(s)	743, 1472, 1557, 1961, 2074
PflFI	GACNNNGTC	1 cut(s)	205
PflMI	CCANNNNNTGG	2 cut(s)	784, 1505
Ple19I	CGATCG	1 cut(s)	2179
PleI	GAGTC	2 cut(s)	205, 1521
PpsI	GAGTC	2 cut(s)	205, 1521
PpuMI	RGGWCCY	1 cut(s)	623
Psp124BI	GAGCTC	1 cut(s)	332
Psp5II	RGGWCCY	1 cut(s)	623
Psp6I	CCWGG	4 cut(s)	340, 1024, 1039, 1504
PspFI	CCCAGC	1 cut(s)	618
PspGI	CCWGG	4 cut(s)	340, 1024, 1039, 1504
PspN4I	GGNNCC	7 cut(s)	102, 430, 624, 625, 876, 1411, 1997
PspPI	GGNCC	4 cut(s)	101, 372, 623, 1410
PspPPI	RGGWCCY	1 cut(s)	623
PsuI	RGATCY	3 cut(s)	349, 855, 2017
PsyI	GACNNNGTC	1 cut(s)	205
PvuI	CGATCG	1 cut(s)	2179
PvuII	CAGCTG	2 cut(s)	585, 2165
RseI	CAYNNNNRTG	3 cut(s)	414, 813, 1932
SacI	GAGCTC	1 cut(s)	332
SalI	GTCGAC	1 cut(s)	199
SaqAI	TTAA	5 cut(s)	1086, 1385, 1569, 2144, 2247
Sau96I	GGNCC	4 cut(s)	101, 372, 623, 1410
ScaI	AGTACT	2 cut(s)	517, 2064
SchI	GAGTC	2 cut(s)	206, 1521
ScrFI	CCNGG	5 cut(s)	342, 799, 1026, 1041, 1506
SduI	GDGCHC	4 cut(s)	332, 805, 1998, 2304
SfaNI	GCATC	5 cut(s)	89, 139, 1306, 1534, 2297
SfcI	CTRYAG	1 cut(s)	144
SfuI	TTCGAA	1 cut(s)	1117
SinI	GGWCC	3 cut(s)	372, 623, 1410
SmiMI	CAYNNNNRTG	3 cut(s)	414, 813, 1932
SmlI	CTYRAG	1 cut(s)	1515
SmoI	CTYRAG	1 cut(s)	1515
SsiI	CCGC	8 cut(s)	156, 213, 273, 291, 378, 396, 1457, 1930
SspI	AATATT	2 cut(s)	1732, 1951
SspMI	CTAG	4 cut(s)	153, 1616, 2069, 2240
SstI	GAGCTC	1 cut(s)	332
StyD4I	CCNGG	5 cut(s)	340, 797, 1024, 1039, 1504
StyI	CCWWGG	2 cut(s)	835, 1798
TaaI	ACNGT	4 cut(s)	460, 699, 1679, 1727
TaiI	ACGT	2 cut(s)	171, 311
TaqI	TCGA	7 cut(s)	200, 1117, 1178, 1720, 1890, 2127, 2175
TatI	WGTACW	4 cut(s)	515, 1211, 1788, 2062
TauI	GCSGC	3 cut(s)	159, 294, 398
TfiI	GAWTC	5 cut(s)	743, 1472, 1557, 1961, 2074
Tru1I	TTAA	5 cut(s)	1086, 1385, 1569, 2144, 2247
Tru9I	TTAA	5 cut(s)	1086, 1385, 1569, 2144, 2247
TscAI	CASTG	3 cut(s)	702, 1730, 2086
TseI	GCWGC	8 cut(s)	260, 965, 1627, 1655, 1774, 1877, 2162, 2165
TspDTI	ATGAA	4 cut(s)	495, 1173, 1295, 1482
TspGWI	ACGGA	3 cut(s)	385, 1480, 2101
TspRI	CASTG	3 cut(s)	702, 1730, 2086
Tth111I	GACNNNGTC	1 cut(s)	205
Van91I	CCANNNNNTGG	2 cut(s)	784, 1505
VpaK11BI	GGWCC	3 cut(s)	372, 623, 1410
XagI	CCTNNNNNAGG	1 cut(s)	1901
XapI	RAATTY	3 cut(s)	705, 1716, 1907
XceI	RCATGY	2 cut(s)	1199, 1795
XcmI	CCANNNNNNNNNTGG	2 cut(s)	20, 1823
XmiI	GTMKAC	3 cut(s)	200, 660, 1782
XmnI	GAANNNNTTC	2 cut(s)	282, 1421
XspI	CTAG	4 cut(s)	153, 1616, 2069, 2240
ZrmI	AGTACT	2 cut(s)	517, 2064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.