Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0015476

Physical Location & Seq

Genomic Coordinates Reverse (-)

8026595 .. 8028249

Gene Structure 1655 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0102200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGACGATATGGACCATCAGAACGATGACAGTTTCAGAGCCGGAGAAAGTATAGATGAAGAAGCATATTATGATTGCCTTGAAGTCGATGACAAATCCGATAAGTTGGGTGAGATTTGGTTCCCACAGAAAAATAATTATACTATTCTGAAGCAAGAAGAAGTTGCCAAACTTCAGGAGGATGATATTGCACAAGCGTCCACTTTTCTTTCGGTATCAAAATCTGATGCATGCTTACTGCTCCTTCACTCGAATTGGAGGACCGATAATCTCACCGATGCATGGTTTGCTGATGAAAATAAAATCCGAGAAAAAGCTGGCTTGTTGAAGAAACCCCTACTCGATAATGCCAGTGAAGATCTAAGCAGTAGTTGCCGACTATGTTCATATAGTAATAGTAGTAATATCTCAGCTTCTTGTGGTCATCCTTTTTGTGGAGATTGCTGGACGGGTTACATAACAAAATCAATCAATGAGGAGGGTCCTGCATGTTTGGTTTTGAGATGTCCTGAACCCGATTGTAGTGCAGTGGTTGGCCCTGATTTAGTCCAAAACGTAATGTTGGCCACAAACCAAGAAGCTGAATGTTATGAGAGGTACAAGCATTACCTATTGAGGTCTTATTTGGAAGATCACAAGTTGATCAAGTGGTGTCCTGCTCCGGATTGTAACTCCGCTATTAGGTTGGATGCTGGTGGTTCTAGTACTAGTTGCTATCATGTCTCGTGTGTTTGCTCTCGTAGTTATTGCTGGAACTGTGAGGAGGAGGAGAATCATCGTCCCGTGGACTGCCAAACTGCAGGGAAGTGGATTTCGAATATATTAGAATCCGTTCATTACCAGCGCTGGCAAAACCACGGAAAATCAAAGGAAAAAGCTCTTGAAGTATTTGACGAGGTGAAGACGACCGTGCATCAAGAATTATTAGAAGGGCACGAGTTGGATTTTTTGTTAGAGTCATGCAAACAGATGATTGAATGCAGGCAGGTATTGCGATGGATTGTTGTGTACGATTACTACAACATGAGTGATCATGAGGCGCAGCATCCTAAACGGAAGCTATTCGAGTGCTTGCAAGGCCATGCGGAGTTCAGCGTGAAGAAGCTTGAGAACCAAGTGCAACAGTTTCTCATCTTGGCTAATAGTGATCCCTCCTCATCCTCATCAGTAGTGGAAAAGAAGGGCTTTGCAGACTTTCGTGTAAGACTCCAAGACCTTACAAATATGACAGCGACCTATTTTAAGAACCTGGTTAGGGCATTAGAGCATGGGCTTCCAGAGACATACTGCGAAGGAGCTAGTTGGTCTTGTGAGCGCTGTACTTATATCAATGCAATGTCTGCCGTTAAATGTGGGATGTGTACCGCACACATTCCAGAGGGCGCCGGTTATTGGTCTTGTGACAAGTGCACCTATTTCAATCCTGCGTCCACCACCAGCTGTTTGATGTGTTCATTGGCAGAGTGCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr RCC1_2

Protein Analysis

490

Amino Acids

55.64

Weight (kDa)

4.97

Isoelectric Point (pI)

56.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	198 - 264	1.2e-13	IBR domain, a half RING-finger domain
Zn_ribbon_RanBP	PF00641	462 - 485	3.8e-07	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09780
fragaria_vesca	FvH4_6g15770
malus_domestica	MD04G1098700.v1.1 MD12G1119400.v1.1
prunus_persica	Prupe.6G237300_v2.0.a1
pyrus_communis	pycom12g11840
rosa_chinensis	RchiOBHm_Chr3g0469481
rosa_laevigata	RLG00000024347
rosa_multiflora	Rmu_sc0004871.1_g000013
rosa_roxburghii	Rroxscaffold_6G00411820
rosa_rugosa	Rorug03G0102200
rosa_samantha	Rh3AG151100 Rh3BG174700 Rh3CG165800 Rh3DG200600
rosa_wichuraiana	Rw3G014270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	976
AccB1I	GGYRCC	1 cut(s)	1382
AccIII	TCCGGA	1 cut(s)	661
AciI	CCGC	3 cut(s)	675, 1085, 1365
AclWI	GGATC	1 cut(s)	1142
AcoI	YGGCCR	1 cut(s)	564
AcuI	CTGAAG	2 cut(s)	158, 170
AcyI	GRCGYC	1 cut(s)	1383
AfaI	GTAC	5 cut(s)	599, 706, 1010, 1321, 1363
AfeI	AGCGCT	2 cut(s)	845, 1316
AfiI	CCNNNNNNNGG	5 cut(s)	282, 434, 681, 1255, 1392
AgsI	TTSAA	5 cut(s)	83, 328, 884, 977, 1420
AhlI	ACTAGT	1 cut(s)	707
AjnI	CCWGG	1 cut(s)	1248
AluBI	AGCT	8 cut(s)	317, 413, 581, 878, 1060, 1105, 1298, 1440
AluI	AGCT	8 cut(s)	317, 413, 581, 878, 1060, 1105, 1298, 1440
Alw21I	GWGCWC	1 cut(s)	1412
Alw26I	GTCTC	2 cut(s)	727, 1274
Alw44I	GTGCAC	1 cut(s)	1408
AlwI	GGATC	1 cut(s)	1142
Aor13HI	TCCGGA	1 cut(s)	661
Aor51HI	AGCGCT	2 cut(s)	845, 1316
AoxI	GGCC	3 cut(s)	535, 564, 1078
ApaLI	GTGCAC	1 cut(s)	1408
ApeKI	GCWGC	2 cut(s)	1042, 1467
Asp700I	GAANNNNTTC	2 cut(s)	831, 1061
AspLEI	GCGC	4 cut(s)	846, 1042, 1317, 1385
AspS9I	GGNCC	4 cut(s)	13, 261, 482, 536
AsuHPI	GGTGA	3 cut(s)	122, 265, 910
AsuII	TTCGAA	1 cut(s)	815
AvaII	GGWCC	3 cut(s)	13, 261, 482
BaeGI	GKGCMC	2 cut(s)	936, 1412
BalI	TGGCCA	1 cut(s)	566
BanI	GGYRCC	1 cut(s)	1382
BauI	CACGAG	2 cut(s)	724, 935
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	1 cut(s)	1412
BbvI	GCAGC	2 cut(s)	1054, 1454
BccI	CCATC	2 cut(s)	24, 990
BceAI	ACGGC	1 cut(s)	1328
BcgI	CGANNNNNNTGC	2 cut(s)	506, 540
BciT130I	CCWGG	1 cut(s)	1250
BclI	TGATCA	2 cut(s)	642, 1030
BcoDI	GTCTC	2 cut(s)	727, 1274
BcuI	ACTAGT	1 cut(s)	707
BfaI	CTAG	3 cut(s)	702, 708, 1299
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	3 cut(s)	847, 1318, 1386
BfuAI	ACCTGC	1 cut(s)	976
BglII	AGATCT	1 cut(s)	358
BisI	GCNGC	2 cut(s)	1043, 1468
BlsI	GCNGC	2 cut(s)	1044, 1469
BmcAI	AGTACT	1 cut(s)	706
Bme1390I	CCNGG	1 cut(s)	1250
Bme18I	GGWCC	3 cut(s)	13, 261, 482
BmgT120I	GGNCC	4 cut(s)	13, 261, 482, 536
BmiI	GGNNCC	3 cut(s)	122, 483, 1384
BmrFI	CCNGG	1 cut(s)	1250
BmsI	GCATC	5 cut(s)	217, 268, 679, 922, 1054
BpiI	GAAGAC	1 cut(s)	908
Bpu14I	TTCGAA	1 cut(s)	815
BpuEI	CTTGAG	1 cut(s)	1127
BsaHI	GRCGYC	1 cut(s)	1383
BsaJI	CCNNGG	2 cut(s)	783, 856
BsaWI	WCCGGW	1 cut(s)	661
Bsc4I	CCNNNNNNNGG	5 cut(s)	282, 434, 681, 1255, 1392
Bse118I	RCCGGY	1 cut(s)	1385
Bse1I	ACTGG	1 cut(s)	351
Bse3DI	GCAATG	1 cut(s)	1341
BseAI	TCCGGA	1 cut(s)	661
BseBI	CCWGG	1 cut(s)	1250
BseDI	CCNNGG	2 cut(s)	783, 856
BseGI	GGATG	6 cut(s)	187, 424, 694, 1045, 1157, 1362
BseLI	CCNNNNNNNGG	5 cut(s)	282, 434, 681, 1255, 1392
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	1 cut(s)	423
BseNI	ACTGG	1 cut(s)	351
BseRI	GAGGAG	5 cut(s)	491, 776, 779, 782, 1144
BseSI	GKGCMC	2 cut(s)	936, 1412
BseXI	GCAGC	2 cut(s)	1054, 1454
BsgI	GTGCAG	1 cut(s)	546
Bsh1285I	CGRYCG	1 cut(s)	909
BshFI	GGCC	3 cut(s)	537, 566, 1080
BshNI	GGYRCC	1 cut(s)	1382
BsiEI	CGRYCG	1 cut(s)	909
BsiHKAI	GWGCWC	1 cut(s)	1412
BsiSI	CCGG	3 cut(s)	42, 662, 1386
BslFI	GGGAC	1 cut(s)	765
BslI	CCNNNNNNNGG	5 cut(s)	282, 434, 681, 1255, 1392
BsmAI	GTCTC	2 cut(s)	727, 1274
BsmFI	GGGAC	1 cut(s)	765
BsmI	GAATGC	1 cut(s)	983
BsnI	GGCC	3 cut(s)	537, 566, 1080
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	2 cut(s)	936, 1412
Bsp13I	TCCGGA	1 cut(s)	661
Bsp143I	GATC	5 cut(s)	358, 631, 642, 1030, 1147
BspACI	CCGC	3 cut(s)	675, 1085, 1365
BspANI	GGCC	3 cut(s)	537, 566, 1080
BspCNI	CTCAG	1 cut(s)	422
BspEI	TCCGGA	1 cut(s)	661
BspHI	TCATGA	1 cut(s)	1033
BspLI	GGNNCC	3 cut(s)	122, 483, 1384
BspMAI	CTGCAG	1 cut(s)	802
BspMI	ACCTGC	1 cut(s)	976
BspPI	GGATC	1 cut(s)	1142
BspT104I	TTCGAA	1 cut(s)	815
BspT107I	GGYRCC	1 cut(s)	1382
BsrDI	GCAATG	1 cut(s)	1341
BsrFI	RCCGGY	1 cut(s)	1385
BsrI	ACTGG	1 cut(s)	351
BssAI	RCCGGY	1 cut(s)	1385
BssECI	CCNNGG	2 cut(s)	783, 856
BssMI	GATC	5 cut(s)	358, 631, 642, 1030, 1147
BssNI	GRCGYC	1 cut(s)	1383
BssSI	CACGAG	2 cut(s)	724, 935
Bst2BI	CACGAG	2 cut(s)	724, 935
Bst2UI	CCWGG	1 cut(s)	1250
Bst4CI	ACNGT	4 cut(s)	32, 758, 910, 1125
BstACI	GRCGYC	1 cut(s)	1383
BstAPI	GCANNNNNTGC	4 cut(s)	287, 372, 991, 1340
BstBI	TTCGAA	1 cut(s)	815
BstC8I	GCNNGC	5 cut(s)	232, 319, 848, 983, 1073
BstDEI	CTNAG	2 cut(s)	362, 409
BstDSI	CCRYGG	2 cut(s)	783, 856
BstF5I	GGATG	6 cut(s)	187, 424, 694, 1045, 1157, 1362
BstH2I	RGCGCY	3 cut(s)	847, 1318, 1386
BstHHI	GCGC	4 cut(s)	846, 1042, 1317, 1385
BstKTI	GATC	5 cut(s)	361, 634, 645, 1033, 1150
BstMAI	GTCTC	2 cut(s)	727, 1274
BstMBI	GATC	5 cut(s)	358, 631, 642, 1030, 1147
BstMCI	CGRYCG	1 cut(s)	909
BstMWI	GCNNNNNNNGC	5 cut(s)	287, 372, 991, 1077, 1340
BstNI	CCWGG	1 cut(s)	1250
BstNSI	RCATGY	2 cut(s)	234, 492
BstSCI	CCNGG	1 cut(s)	1248
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	2 cut(s)	936, 1412
BstV1I	GCAGC	2 cut(s)	1054, 1454
BstV2I	GAAGAC	1 cut(s)	908
BstX2I	RGATCY	1 cut(s)	358
BstYI	RGATCY	1 cut(s)	358
BsuRI	GGCC	3 cut(s)	537, 566, 1080
BtgI	CCRYGG	2 cut(s)	783, 856
BtgZI	GCGATG	1 cut(s)	1009
BtsCI	GGATG	6 cut(s)	187, 424, 694, 1045, 1157, 1362
BtsI	GCAGTG	1 cut(s)	534
BtsIMutI	CAGTG	2 cut(s)	358, 534
BveI	ACCTGC	1 cut(s)	976
Cac8I	GCNNGC	5 cut(s)	232, 319, 848, 983, 1073
CciI	TCATGA	1 cut(s)	1033
CfoI	GCGC	4 cut(s)	846, 1042, 1317, 1385
Cfr10I	RCCGGY	1 cut(s)	1385
Cfr13I	GGNCC	4 cut(s)	13, 261, 482, 536
CseI	GACGC	2 cut(s)	186, 1416
CsiI	ACCWGGT	1 cut(s)	1248
Csp6I	GTAC	5 cut(s)	598, 705, 1009, 1320, 1362
CviAII	CATG	9 cut(s)	231, 282, 489, 719, 960, 1024, 1034, 1082, 1268
CviQI	GTAC	5 cut(s)	598, 705, 1009, 1320, 1362
DdeI	CTNAG	2 cut(s)	362, 409
DinI	GGCGCC	1 cut(s)	1384
DpnI	GATC	5 cut(s)	360, 633, 644, 1032, 1149
DpnII	GATC	5 cut(s)	358, 631, 642, 1030, 1147
EaeI	YGGCCR	1 cut(s)	564
Eco47I	GGWCC	3 cut(s)	13, 261, 482
Eco47III	AGCGCT	2 cut(s)	845, 1316
Eco57I	CTGAAG	2 cut(s)	158, 170
EcoO109I	RGGNCCY	1 cut(s)	482
EcoRII	CCWGG	1 cut(s)	1248
EcoT22I	ATGCAT	2 cut(s)	232, 283
EgeI	GGCGCC	1 cut(s)	1384
EheI	GGCGCC	1 cut(s)	1384
FaeI	CATG	9 cut(s)	234, 285, 492, 722, 963, 1027, 1037, 1085, 1271
FalI	AAGNNNNNCTT	2 cut(s)	1169, 1201
FaqI	GGGAC	1 cut(s)	765
FatI	CATG	9 cut(s)	230, 281, 488, 718, 959, 1023, 1033, 1081, 1267
FbaI	TGATCA	2 cut(s)	642, 1030
Fnu4HI	GCNGC	2 cut(s)	1043, 1468
FokI	GGATG	6 cut(s)	194, 411, 701, 1032, 1144, 1369
Fsp4HI	GCNGC	2 cut(s)	1043, 1468
FspBI	CTAG	3 cut(s)	702, 708, 1299
GlaI	GCGC	4 cut(s)	845, 1041, 1316, 1384
GluI	GCNGC	2 cut(s)	1043, 1468
HaeII	RGCGCY	3 cut(s)	847, 1318, 1386
HaeIII	GGCC	3 cut(s)	537, 566, 1080
HapII	CCGG	3 cut(s)	42, 662, 1386
HgaI	GACGC	2 cut(s)	186, 1416
HhaI	GCGC	4 cut(s)	846, 1042, 1317, 1385
Hin1I	GRCGYC	1 cut(s)	1383
Hin1II	CATG	9 cut(s)	234, 285, 492, 722, 963, 1027, 1037, 1085, 1271
Hin6I	GCGC	4 cut(s)	844, 1040, 1315, 1383
HinP1I	GCGC	4 cut(s)	844, 1040, 1315, 1383
HindIII	AAGCTT	1 cut(s)	1103
HinfI	GANTC	4 cut(s)	772, 827, 956, 1206
HpaII	CCGG	3 cut(s)	42, 662, 1386
HphI	GGTGA	3 cut(s)	122, 265, 910
Hpy166II	GTNNAC	6 cut(s)	201, 787, 1009, 1362, 1410, 1431
Hpy188I	TCNGA	6 cut(s)	21, 38, 100, 150, 226, 308
Hpy188III	TCNNGA	8 cut(s)	176, 509, 662, 881, 917, 1034, 1277, 1376
Hpy8I	GTNNAC	6 cut(s)	201, 787, 1009, 1362, 1410, 1431
HpyAV	CCTTC	4 cut(s)	254, 923, 1174, 1286
HpyCH4III	ACNGT	4 cut(s)	32, 758, 910, 1125
HpyCH4IV	ACGT	1 cut(s)	555
HpyF10VI	GCNNNNNNNGC	5 cut(s)	287, 372, 991, 1077, 1340
HpyF3I	CTNAG	2 cut(s)	362, 409
HpySE526I	ACGT	1 cut(s)	555
Hsp92I	GRCGYC	1 cut(s)	1383
Hsp92II	CATG	9 cut(s)	234, 285, 492, 722, 963, 1027, 1037, 1085, 1271
HspAI	GCGC	4 cut(s)	844, 1040, 1315, 1383
KasI	GGCGCC	1 cut(s)	1382
Kpn2I	TCCGGA	1 cut(s)	661
Ksp22I	TGATCA	2 cut(s)	642, 1030
Kzo9I	GATC	5 cut(s)	358, 631, 642, 1030, 1147
LmnI	GCTCC	3 cut(s)	246, 664, 1295
Lsp1109I	GCAGC	2 cut(s)	1054, 1454
LweI	GCATC	5 cut(s)	217, 268, 679, 922, 1054
MabI	ACCWGGT	1 cut(s)	1248
MaeI	CTAG	3 cut(s)	702, 708, 1299
MaeII	ACGT	1 cut(s)	555
MaeIII	GTNAC	3 cut(s)	452, 668, 1400
MalI	GATC	5 cut(s)	360, 633, 644, 1032, 1149
MboI	GATC	5 cut(s)	358, 631, 642, 1030, 1147
MboII	GAAGA	7 cut(s)	71, 170, 340, 368, 641, 913, 1111
MflI	RGATCY	1 cut(s)	358
MhlI	GDGCHC	2 cut(s)	936, 1412
MlsI	TGGCCA	1 cut(s)	566
MluCI	AATT	3 cut(s)	136, 253, 920
MluNI	TGGCCA	1 cut(s)	566
Mly113I	GGCGCC	1 cut(s)	1383
MlyI	GAGTC	2 cut(s)	965, 1200
MmeI	TCCRAC	2 cut(s)	666, 921
Mox20I	TGGCCA	1 cut(s)	566
Mph1103I	ATGCAT	2 cut(s)	232, 283
MroI	TCCGGA	1 cut(s)	661
MroXI	GAANNNNTTC	2 cut(s)	831, 1061
MscI	TGGCCA	1 cut(s)	566
MseI	TTAA	2 cut(s)	1242, 1347
Msp20I	TGGCCA	1 cut(s)	566
MspA1I	CMGCKG	1 cut(s)	1440
MspI	CCGG	3 cut(s)	42, 662, 1386
MspR9I	CCNGG	1 cut(s)	1250
Mva1269I	GAATGC	1 cut(s)	983
MvaI	CCWGG	1 cut(s)	1250
MwoI	GCNNNNNNNGC	5 cut(s)	287, 372, 991, 1077, 1340
NarI	GGCGCC	1 cut(s)	1383
NdeII	GATC	5 cut(s)	358, 631, 642, 1030, 1147
NlaIII	CATG	9 cut(s)	234, 285, 492, 722, 963, 1027, 1037, 1085, 1271
NlaIV	GGNNCC	3 cut(s)	122, 483, 1384
NmuCI	GTSAC	1 cut(s)	1400
NsiI	ATGCAT	2 cut(s)	232, 283
NspI	RCATGY	2 cut(s)	234, 492
NspV	TTCGAA	1 cut(s)	815
PaeI	GCATGC	1 cut(s)	234
PagI	TCATGA	1 cut(s)	1033
PctI	GAATGC	1 cut(s)	983
PdmI	GAANNNNTTC	2 cut(s)	831, 1061
PfeI	GAWTC	2 cut(s)	772, 827
PkrI	GCNGC	2 cut(s)	1044, 1469
PleI	GAGTC	2 cut(s)	964, 1200
PluTI	GGCGCC	1 cut(s)	1386
PpsI	GAGTC	2 cut(s)	964, 1200
PpuMI	RGGWCCY	1 cut(s)	482
Psp5II	RGGWCCY	1 cut(s)	482
Psp6I	CCWGG	1 cut(s)	1248
PspGI	CCWGG	1 cut(s)	1248
PspN4I	GGNNCC	3 cut(s)	122, 483, 1384
PspPI	GGNCC	4 cut(s)	13, 261, 482, 536
PspPPI	RGGWCCY	1 cut(s)	482
PstI	CTGCAG	1 cut(s)	802
PsuI	RGATCY	1 cut(s)	358
PvuII	CAGCTG	1 cut(s)	1440
RsaI	GTAC	5 cut(s)	599, 706, 1010, 1321, 1363
RsaNI	GTAC	5 cut(s)	598, 705, 1009, 1320, 1362
SaqAI	TTAA	2 cut(s)	1242, 1347
SatI	GCNGC	2 cut(s)	1043, 1468
Sau3AI	GATC	5 cut(s)	358, 631, 642, 1030, 1147
Sau96I	GGNCC	4 cut(s)	13, 261, 482, 536
ScaI	AGTACT	1 cut(s)	706
SchI	GAGTC	2 cut(s)	965, 1200
ScrFI	CCNGG	1 cut(s)	1250
SduI	GDGCHC	2 cut(s)	936, 1412
SexAI	ACCWGGT	1 cut(s)	1248
SfaNI	GCATC	5 cut(s)	217, 268, 679, 922, 1054
SfcI	CTRYAG	1 cut(s)	798
SfoI	GGCGCC	1 cut(s)	1384
SfuI	TTCGAA	1 cut(s)	815
SinI	GGWCC	3 cut(s)	13, 261, 482
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SpeI	ACTAGT	1 cut(s)	707
SphI	GCATGC	1 cut(s)	234
Sse9I	AATT	3 cut(s)	136, 253, 920
SsiI	CCGC	3 cut(s)	675, 1085, 1365
SspDI	GGCGCC	1 cut(s)	1382
SspMI	CTAG	3 cut(s)	702, 708, 1299
StyD4I	CCNGG	1 cut(s)	1248
TaaI	ACNGT	4 cut(s)	32, 758, 910, 1125
TaiI	ACGT	1 cut(s)	558
TaqI	TCGA	5 cut(s)	87, 251, 342, 815, 1065
TaqII	GACCGA	1 cut(s)	278
TasI	AATT	3 cut(s)	136, 253, 920
TatI	WGTACW	2 cut(s)	704, 1319
TfiI	GAWTC	2 cut(s)	772, 827
Tru1I	TTAA	2 cut(s)	1242, 1347
Tru9I	TTAA	2 cut(s)	1242, 1347
TscAI	CASTG	2 cut(s)	358, 534
TseFI	GTSAC	1 cut(s)	1400
TseI	GCWGC	2 cut(s)	1042, 1467
Tsp45I	GTSAC	1 cut(s)	1400
TspDTI	ATGAA	5 cut(s)	72, 309, 375, 824, 1443
TspGWI	ACGGA	3 cut(s)	820, 873, 1069
TspRI	CASTG	2 cut(s)	358, 534
VneI	GTGCAC	1 cut(s)	1408
VpaK11BI	GGWCC	3 cut(s)	13, 261, 482
XceI	RCATGY	2 cut(s)	234, 492
XmnI	GAANNNNTTC	2 cut(s)	831, 1061
XspI	CTAG	3 cut(s)	702, 708, 1299
ZrmI	AGTACT	1 cut(s)	706
Zsp2I	ATGCAT	2 cut(s)	232, 283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.