No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14395 |
| prunus_persica | Prupe.4G147500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0027421 |
| rosa_roxburghii | Rroxscaffold_1G00052100 |
| rosa_samantha | Rh5BG190800 Rh5CG211200 Rh5DG192500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AflIII | ACRYGT | 1 cut(s) | 84 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AhlI | ACTAGT | 1 cut(s) | 127 |
| AjnI | CCWGG | 3 cut(s) | 20, 166, 179 |
| Alw26I | GTCTC | 3 cut(s) | 142, 189, 220 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 101, 133 |
| BbsI | GAAGAC | 1 cut(s) | 114 |
| BciT130I | CCWGG | 3 cut(s) | 22, 168, 181 |
| BcoDI | GTCTC | 3 cut(s) | 142, 189, 220 |
| BcuI | ACTAGT | 1 cut(s) | 127 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BfmI | CTRYAG | 1 cut(s) | 141 |
| Bme1390I | CCNGG | 3 cut(s) | 22, 168, 181 |
| BmiI | GGNNCC | 2 cut(s) | 42, 172 |
| BmrFI | CCNGG | 3 cut(s) | 22, 168, 181 |
| BpiI | GAAGAC | 1 cut(s) | 114 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 137, 169 |
| BpmI | CTGGAG | 1 cut(s) | 4 |
| BsaI | GGTCTC | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseBI | CCWGG | 3 cut(s) | 22, 168, 181 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseRI | GAGGAG | 2 cut(s) | 163, 166 |
| BsiSI | CCGG | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BsmAI | GTCTC | 3 cut(s) | 142, 189, 220 |
| Bso31I | GGTCTC | 1 cut(s) | 189 |
| Bsp143I | GATC | 1 cut(s) | 204 |
| BspCNI | CTCAG | 1 cut(s) | 25 |
| BspLI | GGNNCC | 2 cut(s) | 42, 172 |
| BspMAI | CTGCAG | 1 cut(s) | 145 |
| BspTNI | GGTCTC | 1 cut(s) | 189 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssMI | GATC | 1 cut(s) | 204 |
| Bst2UI | CCWGG | 3 cut(s) | 22, 168, 181 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| Bst6I | CTCTTC | 2 cut(s) | 160, 223 |
| BstDEI | CTNAG | 3 cut(s) | 33, 48, 225 |
| BstKTI | GATC | 1 cut(s) | 207 |
| BstMAI | GTCTC | 3 cut(s) | 142, 189, 220 |
| BstMBI | GATC | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BstNI | CCWGG | 3 cut(s) | 22, 168, 181 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstSCI | CCNGG | 3 cut(s) | 20, 166, 179 |
| BstSFI | CTRYAG | 1 cut(s) | 141 |
| BstV2I | GAAGAC | 1 cut(s) | 114 |
| BtsI | GCAGTG | 1 cut(s) | 138 |
| BtsIMutI | CAGTG | 1 cut(s) | 138 |
| CviAII | CATG | 1 cut(s) | 85 |
| CviJI | RGCY | 4 cut(s) | 41, 47, 137, 171 |
| CviKI_1 | RGCY | 4 cut(s) | 41, 47, 137, 171 |
| DdeI | CTNAG | 3 cut(s) | 33, 48, 225 |
| DpnI | GATC | 1 cut(s) | 206 |
| DpnII | GATC | 1 cut(s) | 204 |
| Eam1104I | CTCTTC | 2 cut(s) | 160, 223 |
| EarI | CTCTTC | 2 cut(s) | 160, 223 |
| Eco31I | GGTCTC | 1 cut(s) | 189 |
| EcoRII | CCWGG | 3 cut(s) | 20, 166, 179 |
| FaeI | CATG | 1 cut(s) | 88 |
| FaiI | YATR | 2 cut(s) | 56, 86 |
| FatI | CATG | 1 cut(s) | 84 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GsuI | CTGGAG | 1 cut(s) | 4 |
| HapII | CCGG | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 88 |
| HincII | GTYRAC | 1 cut(s) | 90 |
| HindII | GTYRAC | 1 cut(s) | 90 |
| HinfI | GANTC | 2 cut(s) | 150, 213 |
| HpaII | CCGG | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 90 |
| Hpy188I | TCNGA | 2 cut(s) | 103, 134 |
| Hpy188III | TCNNGA | 1 cut(s) | 79 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 90 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 1 cut(s) | 143 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 48, 225 |
| Hsp92II | CATG | 1 cut(s) | 88 |
| Kzo9I | GATC | 1 cut(s) | 204 |
| LmnI | GCTCC | 2 cut(s) | 46, 176 |
| LpnPI | CCDG | 7 cut(s) | 7, 34, 57, 153, 166, 180, 193 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MalI | GATC | 1 cut(s) | 206 |
| MboI | GATC | 1 cut(s) | 204 |
| MboII | GAAGA | 5 cut(s) | 119, 147, 150, 210, 213 |
| MlyI | GAGTC | 2 cut(s) | 144, 222 |
| MnlI | CCTC | 5 cut(s) | 28, 28, 97, 184, 187 |
| MseI | TTAA | 1 cut(s) | 12 |
| MspI | CCGG | 1 cut(s) | 44 |
| MspR9I | CCNGG | 3 cut(s) | 22, 168, 181 |
| MvaI | CCWGG | 3 cut(s) | 22, 168, 181 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NdeII | GATC | 1 cut(s) | 204 |
| NlaIII | CATG | 1 cut(s) | 88 |
| NlaIV | GGNNCC | 2 cut(s) | 42, 172 |
| NspI | RCATGY | 1 cut(s) | 88 |
| PciI | ACATGT | 1 cut(s) | 84 |
| PleI | GAGTC | 2 cut(s) | 144, 221 |
| PpsI | GAGTC | 2 cut(s) | 144, 221 |
| PscI | ACATGT | 1 cut(s) | 84 |
| Psp6I | CCWGG | 3 cut(s) | 20, 166, 179 |
| PspGI | CCWGG | 3 cut(s) | 20, 166, 179 |
| PspN4I | GGNNCC | 2 cut(s) | 42, 172 |
| PstI | CTGCAG | 1 cut(s) | 145 |
| SaqAI | TTAA | 1 cut(s) | 12 |
| Sau3AI | GATC | 1 cut(s) | 204 |
| SchI | GAGTC | 2 cut(s) | 144, 222 |
| ScrFI | CCNGG | 3 cut(s) | 22, 168, 181 |
| SetI | ASST | 3 cut(s) | 20, 26, 39 |
| SfcI | CTRYAG | 1 cut(s) | 141 |
| SpeI | ACTAGT | 1 cut(s) | 127 |
| SspMI | CTAG | 1 cut(s) | 128 |
| StyD4I | CCNGG | 3 cut(s) | 20, 166, 179 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| Tru1I | TTAA | 1 cut(s) | 12 |
| Tru9I | TTAA | 1 cut(s) | 12 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TspDTI | ATGAA | 1 cut(s) | 138 |
| TspRI | CASTG | 1 cut(s) | 145 |
| XceI | RCATGY | 1 cut(s) | 88 |
| XspI | CTAG | 1 cut(s) | 128 |