Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012732

Physical Location & Seq

Genomic Coordinates Forward (+)

7926728 .. 7931351

Gene Structure 4624 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGATCCACACCGACATCGCAGAGATCTTATGCGTCAAACCCAAGACAACGAAGAAGACAAAAACAATGGAGGAAGATGTCAAGAAGACGACGACGATGAAGATAGAAGGAGAAGTTGTTGTGATGAAGAAGAATCTCCTTGATTTCAAAGACGTTATGGCTTCTCTTCTTGATCGTGTCAATGAGCTTCTTGGTCGTCGTGTCTCTCTCCACCTCATCAGCTCTCACCAACCCGACCCGGCCAATGAGAAGAGAGGAAGACTTGGAAAAGCAGCACATCTGGAAAAATGGGTAACAAAAATAAAAACGTCAGTAACCGCTGAGGAAACTGCGTTTGGAGTAACGTTTGATTGGGACGAGTCAATGGGACCACCGGCTGCATTTGTGATCAAGAACCACCACCATAGTCAATTCTACCTTAAGTCCCTCACCCTCCGCGGCTTCCCTGATGGCGAAGGTGGTGCCACTGCGATACATTTCATCTGCAATTCTTGGATTTACCCGAATCATCGATACCGCTCCGACCGCGTTTTCTTCTCTAACAAGGCATATCTTCCAAGTGAAACACCGGAGCTAATCAAAGAGCTAAGAGAAGAAGAGCTAAAGAATCTAAGAGGCAATGAGAAAGGAGGAGAATTCAAAGAATGGGACAGAGTTTACGACTACGCTTATTACAACGACTTGGGTGCTCCTGACAAGGGTCCTGACTCAGTTCGTCCGGTTCTTGGCGGTTCACCTGAGCTGCCTTATCCTCGCCGTGGCAAAACCGGCCGTAAATCCACCAAATCAGACCCTAAGTCTGAAAGCAGGCTGGCTTTACTAAACCTAAACATATACGTGCCAAGGGACGAGCGATTTAGCCATGTGAAGTTTTCAGACTTCCTCGCTTATGCACTCAAGTCCGTGACTCAAGTGCTTGTCCCTGAGATCGCCTCTGTTTGCGACAAGACCATCAACGAGTTTGACTCCTTCGAAGATGTTTTTCACCTCTATGACGGTAGTATTAAGCTCGCCAATGGTCACACCATTTCTAAGCTCCGTGATGTTATCCCGTGGGAGATGTTTAGAGAGCTAGTTCGCAACGACGGAGAACGGTTCTTGAAGTATCCCTTGCCTGACATCCTCAAAGAGAGCAGATCGGCTTGGAGGACTGACGAAGAGTTTGCTCGAGAAATGCTGGCCGGTCTTAATCCGGTGGTGATTAGCCGTCTTCAGGAATTTCCACCAAAGAGCTGTCTGGACTCTGCAAAGTATGGAAACCAACACTCTTCCATACGAACAGAGCACATAGAATCAAACATGAACGGCCTCAATGTCCAAGAAGCTTTGGAACAGAATAAGCTATACATATTGGATCATCACGACGCATTGATGCCTTACCTGACACGGATAAACTCAACAAACACTAAAACCTATGCGACCCGAACCCTGCTGTTGCTTCAAGCAGACGGAACACTGAAGCCTCTCGCCATAGAGCTGAGTCTTCCACACGCACAAGGCGAATCATATGGATCGGTCAGCAAAGTTTTCACACCAGCAGAGAAAGGTGTCGAGGGATCGGTTTGGCAACTTGCTAAGGCTTATGCTGCGGTCAATGACTCTGGTTATCATCAGCTTATAAGCCATTGGTTGCAAACGCATGCGGTGATTGAACCGTTCATAATCGCGTCCAATAGGCAGCTCAGCGTGGTCCATCCGATCCATAAACTTCTACATCCTCATTTCCGTGACACTATGAACATCAACGCATTAGCGCGTCATGTACTCATAAACTCAGACGGAGTTCTTGAGAGAACAGTCTTCCCTAGTCGATACGCCATGGAAATGTCTTCTTCAATTTACAAGAATTGGGTTTTCACCGAGCAGGCTCTCCCAAAAGACCTCCTCAAACGAGGAGTTGCTGTTGAAGATCCAAACAGTGACAACGGCGTTAAGCTTCTGATCGAAGATTACCCGTTTGCGGTCGACGGTTTAGAGATTTGGTCAGCGATCAAAACATGGGTCACAGAGTACTGCACATTCTACTACAATAATGACAAAACCGTCCAAACGGATACAGAGATCCAATCATGGTGGACCGAGCTCCGAACCAAAGGCCACGGCGACAAACGACACGAGTCATGGTGGCCTTCGATGCAAACCCGCGACGACCTAATCGAAACCTGCACGATCATCATCTGGATCGCCTCTGCTCTTCACGCAGCAGTAAATTTCGGACAGTACCCTTACGCCGGTTTTCTCCCTAACCGTCCTACCGTCAGCCGCCGGTTTATGCCTGAACCAGGTACGGATGAGTATGCTGAGCTGGAGGAAGATGCTGACGTAGCGTTCTTGAAGACGATCACGCCGCAGTTACAGACTCTACTTGGTATCTCCATCATAGAGATATTGTCTATGCATTCAACGGACGAGATCTACTTAGGGCAAAGAGATTCACCGAATTGGACGGCGGATGATGAGCCTTTGGAGGCGTTTAAGCGGTTTGGGAAAGAACTTGAGCTGATAGAGAACAATATTATACGAAGAAACAATGACAAGAGGTTCAAGAACAGAACCGGACCGGTTAACATACCGTACACATTGTTGTACCCGAATACTACGGATTATACGAGAGAAGGTGGGATTACTGGGAAAGGGATCCCGAACAGTGTCTCAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0034440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0051213 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1900366 GO:1905392 GO:1905393 GO:1990136 GO:2000068

KEGG Pathways

Metabolic & Signaling

ko00591 map00591

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

886

Amino Acids

101.06

Weight (kDa)

6.16

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	75 - 179	4.7e-15	PLAT/LH2 domain
Lipoxygenase	PF00305	193 - 864	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22400
fragaria_vesca	FvH4_4g15250 FvH4_4g15250 FvH4_4g15250
malus_domestica	MD13G1191200.v1.1 MD16G1191300.v1.1
prunus_persica	Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1
pyrus_communis	pycom13g16410 pycom16g16100
rosa_chinensis	RchiOBHm_Chr4g0416591
rosa_laevigata	RLG00000007969
rosa_roxburghii	Rroxscaffold_5G00360470
rosa_rugosa	Rorug04G0143200
rosa_samantha	Rh4BG203100 Rh4CG216500
rosa_wichuraiana	Rw4G017400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1619
AasI	GACNNNNNNGTC	1 cut(s)	2042
Acc36I	ACCTGC	1 cut(s)	2171
AccB1I	GGYRCC	1 cut(s)	461
AccBSI	CCGCTC	1 cut(s)	519
AccI	GTMKAC	1 cut(s)	1965
AccII	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
AclI	AACGTT	1 cut(s)	344
AclWI	GGATC	9 cut(s)	1362, 1519, 1564, 1693, 1904, 2056, 2189, 2632, 2645
AcoI	YGGCCR	3 cut(s)	240, 769, 1179
AcsI	RAATTY	3 cut(s)	635, 1217, 2209
AcuI	CTGAAG	2 cut(s)	1196, 1478
AfaI	GTAC	6 cut(s)	1764, 2012, 2222, 2287, 2576, 2588
AfiI	CCNNNNNNNGG	7 cut(s)	698, 725, 758, 1213, 1960, 2231, 2282
AflII	CTTAAG	1 cut(s)	419
AgeI	ACCGGT	1 cut(s)	2560
AhdI	GACNNNNNGTC	1 cut(s)	796
AjnI	CCWGG	1 cut(s)	2281
AjuI	GAANNNNNNNTTGG	2 cut(s)	318, 350
Alw21I	GWGCWC	3 cut(s)	691, 1287, 2085
Alw26I	GTCTC	2 cut(s)	208, 2656
AlwI	GGATC	9 cut(s)	1362, 1519, 1564, 1693, 1904, 2056, 2189, 2632, 2645
Ama87I	CYCGRG	1 cut(s)	1167
AoxI	GGCC	6 cut(s)	240, 769, 1179, 1306, 2095, 2126
ApeKI	GCWGC	6 cut(s)	272, 377, 742, 1586, 1678, 2201
ApoI	RAATTY	3 cut(s)	635, 1217, 2209
ArsI	GACNNNNNNTTYG	4 cut(s)	1145, 1177, 1986, 2018
AsiGI	ACCGGT	1 cut(s)	2560
AspLEI	GCGC	1 cut(s)	1756
AspS9I	GGNCC	5 cut(s)	368, 701, 1690, 2076, 2558
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	8 cut(s)	218, 421, 726, 977, 1210, 1657, 1849, 2427
AsuII	TTCGAA	1 cut(s)	972
AvaI	CYCGRG	1 cut(s)	1167
AvaII	GGWCC	5 cut(s)	368, 701, 1690, 2076, 2558
BamHI	GGATCC	1 cut(s)	2637
BanI	GGYRCC	1 cut(s)	461
BanII	GRGCYC	1 cut(s)	2085
BauI	CACGAG	1 cut(s)	2114
BbsI	GAAGAC	8 cut(s)	62, 92, 265, 1202, 1475, 1792, 1821, 2342
Bbv12I	GWGCWC	3 cut(s)	691, 1287, 2085
BbvCI	CCTCAGC	1 cut(s)	321
BbvI	GCAGC	6 cut(s)	284, 364, 729, 1573, 1690, 2213
BccI	CCATC	4 cut(s)	443, 959, 1701, 2384
BceAI	ACGGC	7 cut(s)	741, 756, 1191, 1321, 1942, 2116, 2463
BcgI	CGANNNNNNTGC	6 cut(s)	443, 477, 668, 702, 1145, 1179
BciT130I	CCWGG	1 cut(s)	2283
BciVI	GTATCC	2 cut(s)	1116, 2047
BclI	TGATCA	1 cut(s)	387
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	2 cut(s)	208, 2656
BfaI	CTAG	2 cut(s)	1073, 1806
BfrI	CTTAAG	1 cut(s)	419
BfuAI	ACCTGC	1 cut(s)	2171
BfuI	GTATCC	2 cut(s)	1116, 2047
BglII	AGATCT	2 cut(s)	24, 2412
BisI	GCNGC	9 cut(s)	273, 378, 439, 743, 1587, 1679, 2202, 2263, 2348
BlpI	GCTNAGC	2 cut(s)	1682, 2301
BlsI	GCNGC	9 cut(s)	274, 379, 440, 744, 1588, 1680, 2203, 2264, 2349
BmcAI	AGTACT	1 cut(s)	2012
Bme1390I	CCNGG	2 cut(s)	239, 2283
Bme18I	GGWCC	5 cut(s)	368, 701, 1690, 2076, 2558
BmeRI	GACNNNNNGTC	1 cut(s)	796
BmeT110I	CYCGRG	1 cut(s)	1167
BmgT120I	GGNCC	5 cut(s)	368, 701, 1690, 2076, 2558
BmiI	GGNNCC	4 cut(s)	369, 463, 702, 2639
BmrFI	CCNGG	2 cut(s)	239, 2283
BmrI	ACTGGG	1 cut(s)	2637
BmsI	GCATC	3 cut(s)	1362, 2124, 2305
BmuI	ACTGGG	1 cut(s)	2637
BoxI	GACNNNNGTC	2 cut(s)	699, 2116
BpiI	GAAGAC	8 cut(s)	62, 92, 265, 1202, 1475, 1792, 1821, 2342
BplI	GAGNNNNNCTC	4 cut(s)	917, 949, 950, 982
BpmI	CTGGAG	1 cut(s)	2327
Bpu10I	CCTNAGC	3 cut(s)	321, 738, 1575
Bpu1102I	GCTNAGC	2 cut(s)	1682, 2301
Bpu14I	TTCGAA	1 cut(s)	972
BpuEI	CTTGAG	4 cut(s)	881, 894, 1808, 2516
BpuMI	CCSGG	1 cut(s)	239
Bsa29I	ATCGAT	1 cut(s)	511
BsaAI	YACGTR	1 cut(s)	838
BsaBI	GATNNNNATC	1 cut(s)	2174
BsaJI	CCNNGG	6 cut(s)	436, 757, 842, 1052, 1818, 2098
BsaWI	WCCGGW	5 cut(s)	568, 718, 1192, 2555, 2560
BsaXI	ACNNNNNCTCC	4 cut(s)	102, 132, 1887, 1917
Bsc4I	CCNNNNNNNGG	7 cut(s)	698, 725, 758, 1213, 1960, 2231, 2282
Bse118I	RCCGGY	6 cut(s)	373, 767, 1181, 2231, 2265, 2560
Bse1I	ACTGG	1 cut(s)	2632
Bse3DI	GCAATG	1 cut(s)	625
Bse8I	GATNNNNATC	1 cut(s)	2174
BseBI	CCWGG	1 cut(s)	2283
BseCI	ATCGAT	1 cut(s)	511
BseDI	CCNNGG	6 cut(s)	436, 757, 842, 1052, 1818, 2098
BseGI	GGATG	5 cut(s)	1119, 1693, 1714, 2296, 2458
BseJI	GATNNNNATC	1 cut(s)	2174
BseLI	CCNNNNNNNGG	7 cut(s)	698, 725, 758, 1213, 1960, 2231, 2282
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	8 cut(s)	312, 723, 729, 915, 1469, 1696, 1788, 2292
BseNI	ACTGG	1 cut(s)	2632
BseRI	GAGGAG	3 cut(s)	645, 1874, 1908
BseX3I	CGGCCG	1 cut(s)	769
BseXI	GCAGC	6 cut(s)	284, 364, 729, 1573, 1690, 2213
BsgI	GTGCAG	2 cut(s)	1999, 2149
Bsh1236I	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
Bsh1285I	CGRYCG	3 cut(s)	526, 772, 1965
BshFI	GGCC	6 cut(s)	242, 771, 1181, 1308, 2097, 2128
BshNI	GGYRCC	1 cut(s)	461
BshTI	ACCGGT	1 cut(s)	2560
BshVI	ATCGAT	1 cut(s)	511
BsiEI	CGRYCG	3 cut(s)	526, 772, 1965
BsiHKAI	GWGCWC	3 cut(s)	691, 1287, 2085
BsiHKCI	CYCGRG	1 cut(s)	1167
BslFI	GGGAC	6 cut(s)	368, 381, 409, 662, 860, 905
BslI	CCNNNNNNNGG	7 cut(s)	698, 725, 758, 1213, 1960, 2231, 2282
BsmAI	GTCTC	2 cut(s)	208, 2656
BsmFI	GGGAC	6 cut(s)	368, 381, 409, 662, 860, 905
BsmI	GAATGC	1 cut(s)	2398
BsnI	GGCC	6 cut(s)	242, 771, 1181, 1308, 2097, 2128
BsoBI	CYCGRG	1 cut(s)	1167
Bsp119I	TTCGAA	1 cut(s)	972
Bsp1286I	GDGCHC	3 cut(s)	691, 1287, 2085
Bsp1720I	GCTNAGC	2 cut(s)	1682, 2301
Bsp19I	CCATGG	1 cut(s)	1818
BspANI	GGCC	6 cut(s)	242, 771, 1181, 1308, 2097, 2128
BspCNI	CTCAG	8 cut(s)	313, 722, 730, 916, 1470, 1695, 1787, 2293
BspDI	ATCGAT	1 cut(s)	511
BspFNI	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
BspLI	GGNNCC	4 cut(s)	369, 463, 702, 2639
BspMI	ACCTGC	1 cut(s)	2171
BspPI	GGATC	9 cut(s)	1362, 1519, 1564, 1693, 1904, 2056, 2189, 2632, 2645
BspQI	GCTCTTC	2 cut(s)	591, 2199
BspT104I	TTCGAA	1 cut(s)	972
BspT107I	GGYRCC	1 cut(s)	461
BspTI	CTTAAG	1 cut(s)	419
BsrBI	CCGCTC	1 cut(s)	519
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	6 cut(s)	373, 767, 1181, 2231, 2265, 2560
BsrI	ACTGG	1 cut(s)	2632
BssAI	RCCGGY	6 cut(s)	373, 767, 1181, 2231, 2265, 2560
BssECI	CCNNGG	6 cut(s)	436, 757, 842, 1052, 1818, 2098
BssSI	CACGAG	1 cut(s)	2114
BssT1I	CCWWGG	2 cut(s)	842, 1818
Bst2BI	CACGAG	1 cut(s)	2114
Bst2UI	CCWGG	1 cut(s)	2283
Bst6I	CTCTTC	6 cut(s)	171, 245, 591, 1152, 1273, 2199
BstAFI	CTTAAG	1 cut(s)	419
BstBAI	YACGTR	1 cut(s)	838
BstBI	TTCGAA	1 cut(s)	972
BstC8I	GCNNGC	6 cut(s)	809, 813, 1011, 1179, 1641, 1866
BstDSI	CCRYGG	5 cut(s)	436, 757, 1052, 1818, 2098
BstENI	CCTNNNNNAGG	1 cut(s)	2280
BstF5I	GGATG	5 cut(s)	1119, 1693, 1714, 2296, 2458
BstFNI	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
BstHHI	GCGC	1 cut(s)	1756
BstMAI	GTCTC	2 cut(s)	208, 2656
BstMCI	CGRYCG	3 cut(s)	526, 772, 1965
BstMWI	GCNNNNNNNGC	6 cut(s)	525, 768, 1586, 2134, 2198, 2324
BstNI	CCWGG	1 cut(s)	2283
BstNSI	RCATGY	1 cut(s)	1643
BstPAI	GACNNNNGTC	2 cut(s)	699, 2116
BstSCI	CCNGG	2 cut(s)	237, 2281
BstUI	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
BstV1I	GCAGC	6 cut(s)	284, 364, 729, 1573, 1690, 2213
BstV2I	GAAGAC	8 cut(s)	62, 92, 265, 1202, 1475, 1792, 1821, 2342
BstX2I	RGATCY	5 cut(s)	24, 1909, 2061, 2412, 2637
BstYI	RGATCY	5 cut(s)	24, 1909, 2061, 2412, 2637
BstZI	CGGCCG	1 cut(s)	769
Bsu15I	ATCGAT	1 cut(s)	511
BsuI	GTATCC	2 cut(s)	1116, 2047
BsuRI	GGCC	6 cut(s)	242, 771, 1181, 1308, 2097, 2128
BsuTUI	ATCGAT	1 cut(s)	511
BtgI	CCRYGG	5 cut(s)	436, 757, 1052, 1818, 2098
BtsCI	GGATG	5 cut(s)	1119, 1693, 1714, 2296, 2458
BtsI	GCAGTG	1 cut(s)	465
BtsIMutI	CAGTG	4 cut(s)	465, 1454, 1924, 2653
BveI	ACCTGC	1 cut(s)	2171
Cac8I	GCNNGC	6 cut(s)	809, 813, 1011, 1179, 1641, 1866
CfoI	GCGC	1 cut(s)	1756
Cfr10I	RCCGGY	6 cut(s)	373, 767, 1181, 2231, 2265, 2560
Cfr13I	GGNCC	5 cut(s)	368, 701, 1690, 2076, 2558
Cfr42I	CCGCGG	1 cut(s)	439
ClaI	ATCGAT	1 cut(s)	511
CpoI	CGGWCCG	1 cut(s)	2558
CseI	GACGC	4 cut(s)	22, 1373, 1656, 1745
CsiI	ACCWGGT	1 cut(s)	2281
Csp6I	GTAC	6 cut(s)	1763, 2011, 2221, 2286, 2575, 2587
CspAI	ACCGGT	1 cut(s)	2560
CspCI	CAANNNNNGTGG	2 cut(s)	2054, 2089
CspI	CGGWCCG	1 cut(s)	2558
CviAII	CATG	8 cut(s)	863, 1300, 1640, 1760, 1819, 1998, 2070, 2121
CviQI	GTAC	6 cut(s)	1763, 2011, 2221, 2286, 2575, 2587
DrdI	GACNNNNNNGTC	1 cut(s)	2042
DriI	GACNNNNNGTC	1 cut(s)	796
DseDI	GACNNNNNNGTC	1 cut(s)	2042
EaeI	YGGCCR	3 cut(s)	240, 769, 1179
EagI	CGGCCG	1 cut(s)	769
Eam1104I	CTCTTC	6 cut(s)	171, 245, 591, 1152, 1273, 2199
Eam1105I	GACNNNNNGTC	1 cut(s)	796
EarI	CTCTTC	6 cut(s)	171, 245, 591, 1152, 1273, 2199
EciI	GGCGGA	1 cut(s)	2465
Ecl136II	GAGCTC	1 cut(s)	2083
EclXI	CGGCCG	1 cut(s)	769
Eco130I	CCWWGG	2 cut(s)	842, 1818
Eco24I	GRGCYC	1 cut(s)	2085
Eco47I	GGWCC	5 cut(s)	368, 701, 1690, 2076, 2558
Eco52I	CGGCCG	1 cut(s)	769
Eco53kI	GAGCTC	1 cut(s)	2083
Eco57I	CTGAAG	2 cut(s)	1196, 1478
Eco88I	CYCGRG	1 cut(s)	1167
EcoICRI	GAGCTC	1 cut(s)	2083
EcoNI	CCTNNNNNAGG	1 cut(s)	2280
EcoO109I	RGGNCCY	1 cut(s)	701
EcoRI	GAATTC	1 cut(s)	635
EcoRII	CCWGG	1 cut(s)	2281
EcoT14I	CCWWGG	2 cut(s)	842, 1818
EcoT22I	ATGCAT	1 cut(s)	2400
EcoT38I	GRGCYC	1 cut(s)	2085
ErhI	CCWWGG	2 cut(s)	842, 1818
FaeI	CATG	8 cut(s)	866, 1303, 1643, 1763, 1822, 2001, 2073, 2124
FalI	AAGNNNNNCTT	2 cut(s)	1094, 1126
FaqI	GGGAC	6 cut(s)	368, 381, 409, 662, 860, 905
FatI	CATG	8 cut(s)	862, 1299, 1639, 1759, 1818, 1997, 2069, 2120
FauI	CCCGC	1 cut(s)	2150
FauNDI	CATATG	1 cut(s)	1507
FbaI	TGATCA	1 cut(s)	387
FblI	GTMKAC	1 cut(s)	1965
Fnu4HI	GCNGC	9 cut(s)	273, 378, 439, 743, 1587, 1679, 2202, 2263, 2348
FokI	GGATG	5 cut(s)	1106, 1680, 1701, 2303, 2465
FriOI	GRGCYC	1 cut(s)	2085
Fsp4HI	GCNGC	9 cut(s)	273, 378, 439, 743, 1587, 1679, 2202, 2263, 2348
FspBI	CTAG	2 cut(s)	1073, 1806
GlaI	GCGC	1 cut(s)	1755
GluI	GCNGC	9 cut(s)	273, 378, 439, 743, 1587, 1679, 2202, 2263, 2348
GsuI	CTGGAG	1 cut(s)	2327
HaeIII	GGCC	6 cut(s)	242, 771, 1181, 1308, 2097, 2128
HgaI	GACGC	4 cut(s)	22, 1373, 1656, 1745
HhaI	GCGC	1 cut(s)	1756
Hin1II	CATG	8 cut(s)	866, 1303, 1643, 1763, 1822, 2001, 2073, 2124
Hin6I	GCGC	1 cut(s)	1754
HinP1I	GCGC	1 cut(s)	1754
HincII	GTYRAC	2 cut(s)	1966, 2566
HindII	GTYRAC	2 cut(s)	1966, 2566
HindIII	AAGCTT	2 cut(s)	1323, 1934
HpaI	GTTAAC	1 cut(s)	2566
HphI	GGTGA	8 cut(s)	218, 421, 726, 977, 1210, 1657, 1849, 2427
Hpy166II	GTNNAC	6 cut(s)	658, 734, 1966, 2076, 2566, 2577
Hpy188I	TCNGA	9 cut(s)	523, 790, 802, 877, 1698, 1777, 1941, 2087, 2216
Hpy8I	GTNNAC	6 cut(s)	658, 734, 1966, 2076, 2566, 2577
Hpy99I	CGWCG	7 cut(s)	94, 97, 201, 1088, 1367, 1970, 2150
HpyAV	CCTTC	5 cut(s)	101, 449, 979, 2139, 2609
HpyCH4IV	ACGT	5 cut(s)	153, 308, 344, 837, 2322
HpyCH4V	TGCA	9 cut(s)	380, 486, 893, 1247, 1633, 2016, 2137, 2166, 2398
HpyF10VI	GCNNNNNNNGC	6 cut(s)	525, 768, 1586, 2134, 2198, 2324
HpySE526I	ACGT	5 cut(s)	153, 308, 344, 837, 2322
Hsp92II	CATG	8 cut(s)	866, 1303, 1643, 1763, 1822, 2001, 2073, 2124
HspAI	GCGC	1 cut(s)	1754
Ksp22I	TGATCA	1 cut(s)	387
KspAI	GTTAAC	1 cut(s)	2566
KspI	CCGCGG	1 cut(s)	439
LguI	GCTCTTC	2 cut(s)	591, 2199
LmnI	GCTCC	5 cut(s)	524, 571, 694, 1041, 2088
Lsp1109I	GCAGC	6 cut(s)	284, 364, 729, 1573, 1690, 2213
LweI	GCATC	3 cut(s)	1362, 2124, 2305
MabI	ACCWGGT	1 cut(s)	2281
MaeI	CTAG	2 cut(s)	1073, 1806
MaeII	ACGT	5 cut(s)	153, 308, 344, 837, 2322
MaeIII	GTNAC	9 cut(s)	292, 313, 340, 904, 1019, 1727, 1919, 2002, 2352
MbiI	CCGCTC	1 cut(s)	519
MflI	RGATCY	5 cut(s)	24, 1909, 2061, 2412, 2637
MhlI	GDGCHC	3 cut(s)	691, 1287, 2085
MluCI	AATT	8 cut(s)	410, 487, 635, 1217, 1836, 1846, 2209, 2440
MlyI	GAGTC	9 cut(s)	368, 701, 901, 959, 1235, 1489, 1592, 2126, 2353
MmeI	TCCRAC	1 cut(s)	546
Mph1103I	ATGCAT	1 cut(s)	2400
MseI	TTAA	6 cut(s)	420, 1005, 1188, 1932, 2475, 2565
MslI	CAYNNNNRTG	4 cut(s)	836, 990, 1725, 1823
MspA1I	CMGCKG	2 cut(s)	320, 438
MspCI	CTTAAG	1 cut(s)	419
MspR9I	CCNGG	2 cut(s)	239, 2283
Mva1269I	GAATGC	1 cut(s)	2398
MvaI	CCWGG	1 cut(s)	2283
MvnI	CGCG	5 cut(s)	438, 528, 1667, 1756, 2145
MwoI	GCNNNNNNNGC	6 cut(s)	525, 768, 1586, 2134, 2198, 2324
NciI	CCSGG	1 cut(s)	239
NcoI	CCATGG	1 cut(s)	1818
NdeI	CATATG	1 cut(s)	1507
NlaIII	CATG	8 cut(s)	866, 1303, 1643, 1763, 1822, 2001, 2073, 2124
NlaIV	GGNNCC	4 cut(s)	369, 463, 702, 2639
NmuCI	GTSAC	5 cut(s)	904, 1019, 1727, 1919, 2002
NsiI	ATGCAT	1 cut(s)	2400
NspI	RCATGY	1 cut(s)	1643
NspV	TTCGAA	1 cut(s)	972
PaeI	GCATGC	1 cut(s)	1643
PaeR7I	CTCGAG	1 cut(s)	1167
PciSI	GCTCTTC	2 cut(s)	591, 2199
PcsI	WCGNNNNNNNCGW	3 cut(s)	1497, 2154, 2606
PctI	GAATGC	1 cut(s)	2398
PfeI	GAWTC	6 cut(s)	133, 505, 607, 1292, 1502, 2432
PinAI	ACCGGT	1 cut(s)	2560
PkrI	GCNGC	9 cut(s)	274, 379, 440, 744, 1588, 1680, 2203, 2264, 2349
PleI	GAGTC	9 cut(s)	367, 701, 901, 959, 1235, 1488, 1592, 2125, 2353
PpsI	GAGTC	9 cut(s)	367, 701, 901, 959, 1235, 1488, 1592, 2125, 2353
Ppu21I	YACGTR	1 cut(s)	838
PpuMI	RGGWCCY	1 cut(s)	701
PshAI	GACNNNNGTC	2 cut(s)	699, 2116
PsiI	TTATAA	1 cut(s)	1619
Psp124BI	GAGCTC	1 cut(s)	2085
Psp1406I	AACGTT	1 cut(s)	344
Psp5II	RGGWCCY	1 cut(s)	701
Psp6I	CCWGG	1 cut(s)	2281
PspGI	CCWGG	1 cut(s)	2281
PspN4I	GGNNCC	4 cut(s)	369, 463, 702, 2639
PspPI	GGNCC	5 cut(s)	368, 701, 1690, 2076, 2558
PspPPI	RGGWCCY	1 cut(s)	701
PsuI	RGATCY	5 cut(s)	24, 1909, 2061, 2412, 2637
RsaI	GTAC	6 cut(s)	1764, 2012, 2222, 2287, 2576, 2588
RsaNI	GTAC	6 cut(s)	1763, 2011, 2221, 2286, 2575, 2587
RseI	CAYNNNNRTG	4 cut(s)	836, 990, 1725, 1823
Rsr2I	CGGWCCG	1 cut(s)	2558
RsrII	CGGWCCG	1 cut(s)	2558
SacI	GAGCTC	1 cut(s)	2085
SacII	CCGCGG	1 cut(s)	439
SalI	GTCGAC	1 cut(s)	1964
SapI	GCTCTTC	2 cut(s)	591, 2199
SaqAI	TTAA	6 cut(s)	420, 1005, 1188, 1932, 2475, 2565
SatI	GCNGC	9 cut(s)	273, 378, 439, 743, 1587, 1679, 2202, 2263, 2348
Sau96I	GGNCC	5 cut(s)	368, 701, 1690, 2076, 2558
ScaI	AGTACT	1 cut(s)	2012
SchI	GAGTC	9 cut(s)	368, 701, 901, 959, 1235, 1489, 1592, 2126, 2353
ScrFI	CCNGG	2 cut(s)	239, 2283
SduI	GDGCHC	3 cut(s)	691, 1287, 2085
SexAI	ACCWGGT	1 cut(s)	2281
SfaNI	GCATC	3 cut(s)	1362, 2124, 2305
Sfr274I	CTCGAG	1 cut(s)	1167
Sfr303I	CCGCGG	1 cut(s)	439
SfuI	TTCGAA	1 cut(s)	972
SgrBI	CCGCGG	1 cut(s)	439
SinI	GGWCC	5 cut(s)	368, 701, 1690, 2076, 2558
SlaI	CTCGAG	1 cut(s)	1167
SmiMI	CAYNNNNRTG	4 cut(s)	836, 990, 1725, 1823
SmlI	CTYRAG	6 cut(s)	419, 896, 909, 1167, 1787, 2495
SmoI	CTYRAG	6 cut(s)	419, 896, 909, 1167, 1787, 2495
SphI	GCATGC	1 cut(s)	1643
Sse9I	AATT	8 cut(s)	410, 487, 635, 1217, 1836, 1846, 2209, 2440
SspI	AATATT	1 cut(s)	2515
SspMI	CTAG	2 cut(s)	1073, 1806
SstI	GAGCTC	1 cut(s)	2085
StyD4I	CCNGG	2 cut(s)	237, 2281
StyI	CCWWGG	2 cut(s)	842, 1818
TaiI	ACGT	5 cut(s)	156, 311, 347, 840, 2325
TaqI	TCGA	9 cut(s)	511, 972, 1168, 1551, 1810, 1944, 1965, 2132, 2157
TaqII	GACCGA	2 cut(s)	1504, 2093
TasI	AATT	8 cut(s)	410, 487, 635, 1217, 1836, 1846, 2209, 2440
TatI	WGTACW	2 cut(s)	1762, 2010
TauI	GCSGC	3 cut(s)	441, 2265, 2350
TfiI	GAWTC	6 cut(s)	133, 505, 607, 1292, 1502, 2432
Tru1I	TTAA	6 cut(s)	420, 1005, 1188, 1932, 2475, 2565
Tru9I	TTAA	6 cut(s)	420, 1005, 1188, 1932, 2475, 2565
TscAI	CASTG	4 cut(s)	472, 1461, 1924, 2653
TseFI	GTSAC	5 cut(s)	904, 1019, 1727, 1919, 2002
TseI	GCWGC	6 cut(s)	272, 377, 742, 1586, 1678, 2201
Tsp45I	GTSAC	5 cut(s)	904, 1019, 1727, 1919, 2002
TspDTI	ATGAA	6 cut(s)	113, 140, 469, 1316, 1648, 1751
TspRI	CASTG	4 cut(s)	472, 1461, 1924, 2653
Vha464I	CTTAAG	1 cut(s)	419
VpaK11BI	GGWCC	5 cut(s)	368, 701, 1690, 2076, 2558
XagI	CCTNNNNNAGG	1 cut(s)	2280
XapI	RAATTY	3 cut(s)	635, 1217, 2209
XceI	RCATGY	1 cut(s)	1643
XhoI	CTCGAG	1 cut(s)	1167
XmiI	GTMKAC	1 cut(s)	1965
XspI	CTAG	2 cut(s)	1073, 1806
ZrmI	AGTACT	1 cut(s)	2012
Zsp2I	ATGCAT	1 cut(s)	2400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.