Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0012732

Physical Location & Seq

Genomic Coordinates Reverse (-)

34812262 .. 34819626

Gene Structure 7365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG203100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGTCGAGGGGGAAGATTGGAAAGATAGCTTACTTGGAGAACTGGATTACAACCCTTACAGCCTTGACTGCTGGAGATACTGCTTTCACCGTTTCAATTGACTGGGATGAGTCAATGGGAGTTCCTGGGGCTTTGATGATCAGAAACCATCACCATAGCCAATTTTACCTCAAGACAATTACATTAGATGATGTTCCTGGACACGGTCCAGTCCATTTTGTCTGCAATTCCTGGGTTTACCCTGCACATCGTTACAAGTATAATCGGATATTTTTCTCCAACAAGGCCTACCTGCCATCTCAAACACCTGAGCTGTTACTCCCTTACAGGGAAGAAGAGCTGAGTAATCTCCGTGGAAGTGGATCGGGCGAGCTAAAGGAGTGGGACAGAGTCTATGACTATGCTTACTACAATGATTTGGGGAGTCCAGACAAGGGTCCAGAATATGCACGCCCTGTTCTTGGTGGATCACAAGAGTATCCCTATCCAAGAAGAGGAAGAACTGGTCGAAAACCAACTAAAACTGACCCCAACTCTGAAAGCAGGCTGTTTCTTCTAAGTCTAGACATCTATGTTCCAAGAGATGAGCGCTTTGGCCACGTTAAGTTTTCAGATTTTCTTGCATATGCCCTAAAATCCCTGGTTCAGATATTGCTCCCAGAGCTTAGATCGCTGTGTGATAAAACTATCGATGAGTTTGACACGTTTGAGGATGTACTTGATCTCTATGAAGGAGGCATCAAGCTACCAAATGGGCCTACACTCAAAAAATTAAGGGATCGTGTCCCTTGGGAGCTTCTCAGGGAATTACTTCGCTCAGATGGCGAGCGATTTCTCAAGTTCCCAATGCCTGATGTGATTAAAGAGGATAAATGTGCATGGAGGACGGATGAAGAGTTTGCAAGAGAAATGCTGGCAGGGGTTAACCCTGTTAACATCACCCGCCTTCAAGAATTTCCCCCAACCAGCAAGCTAGACCCTAAAGTATATGGGAATCAGAACAGTTCAATACGAAAAGAACAGATAGAAAGGAACATGAATGGCCTCAGTGTTGAAGAAGCAATTAAAAGCAACAGACTTTTCATATTAGATCATCATGACGCATTAATGACATACCTGAGACGAATAAACACAACAACGACAAAGACCTATGCCACCAGAACTTTCCTCTTGCTACAAGAAGATGGGACATTGAAGCCTTTGGCAATTGAGTTAAGCCTTCCACATCCACAAGGGGAGCATCATGGTGCTGTCAGCAAAGTTTTCACTCCAGCAGAAGATGGCATCGAGGCTTCAGTTTGGCAGCTGGCCAAAGCTTACGCTGCTGTAAATGATTCTGGCTATCATCAACTTATCAGCCACTGGTTAAACACCCATGCTGTAATAGAGCCATTTATAATTGCAACAAATAGACAGTTGAGTGTGCTTCACCCGATACATAAGCTTCTGCAACCACACTTCCGGGACACGATGAACATAAATGCCCTGGCCAGGCAAATCCTAATCAATGCTGGAGGGGTGCTTGAGAAGACAGTCTTCCCAGCTCAATATGCCATGGAAATGTCTGCCGTTATTTATAAAAACTGGGTATTCACCGAGCAAGCACTACCTGCTGACTTGCTCAAGAGGGGAATGGCAATTTCGGACCCAAGTAGCCCTCATGGCCTCAGACTTCTGATAGAAGATTACCCCTTTGCTGTTGATGGGCTGGAAATATGGTCTGCCATTGAAACTTGGGTCACTGAATATTGCACTTTCTACTATCCAACAGATAACGTGGTCAAAAGTGATTCTGAACTCCAGAAATGGTGGGAAGAGCTCCGCAATGAAGGCCATGGTGACAAGAAGGATGAACCATGGTGGCCAGAGATGCAAACTAGAGCTGAACTTATCCAATCATGCACCATAATCATATGGATAGCTTCTGCCCTCCATGCTGCTGTGAATTTCGGGCAGTGGCCTTATGCTGGCTACCTCCCAAATCGCCCAACAATAAGCCGCCGATTCATGCCTGAGCCAGGCACTGCTGAATATGATGAACTTGAGACAAACCCTGATGTGGCCTTCCTCAAAACAATTACATCCCAGCTCCAAACTCTTCTTGGCGTATCTCTGATAGAGATTTTATCACGACATTCAACTGATGAGATATATCTTGGACAAAGAGATACTCTTGAGTGGACTTCAGATGGTGAGGCACTAGCAGCATTTGATAGATTCGGAAAGAAGCTGATAGAAATTGAGAACAGAATTACAGAAATGAACGAGGATGAGAGATGGAAGAACAGGGTTGGGCCCGTGAAGATGCCTTATACCTTGCTCTATCCCAGCACCTCAGATTACTCTAGAGAGGGTGGACTCACTGGAAAGGGAATTCCCAACAGTGTCTCAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0034440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0051213 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1900366 GO:1905392 GO:1905393 GO:1990136 GO:2000068

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

798

Amino Acids

91.25

Weight (kDa)

5.59

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	3 - 92	8.7e-18	PLAT/LH2 domain
Lipoxygenase	PF00305	107 - 776	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22400
fragaria_vesca	FvH4_4g15250 FvH4_4g15250 FvH4_4g15250
malus_domestica	MD13G1191200.v1.1 MD16G1191300.v1.1
prunus_persica	Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1
pyrus_communis	pycom13g16410 pycom16g16100
rosa_chinensis	RchiOBHm_Chr4g0416591
rosa_laevigata	RLG00000007969
rosa_roxburghii	Rroxscaffold_5G00360470
rosa_rugosa	Rorug04G0143200
rosa_samantha	Rh4BG203100 Rh4CG216500
rosa_wichuraiana	Rw4G017400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1397, 1578
Acc36I	ACCTGC	2 cut(s)	300, 1618
AciI	CCGC	3 cut(s)	943, 1822, 1999
AclWI	GGATC	3 cut(s)	370, 475, 786
AcoI	YGGCCR	4 cut(s)	595, 1308, 1488, 1862
AcsI	RAATTY	3 cut(s)	953, 1945, 2373
AcuI	CTGAAG	2 cut(s)	1278, 2169
AfaI	GTAC	1 cut(s)	717
AfeI	AGCGCT	1 cut(s)	590
AfiI	CCNNNNNNNGG	9 cut(s)	203, 328, 434, 461, 494, 1491, 1967, 2018, 2059
AflIII	ACRYGT	1 cut(s)	702
AgsI	TTSAA	7 cut(s)	96, 950, 1008, 1055, 1195, 1730, 2139
AjnI	CCWGG	7 cut(s)	124, 196, 230, 639, 1485, 1490, 2017
Alw21I	GWGCWC	1 cut(s)	1821
Alw26I	GTCTC	3 cut(s)	1114, 2039, 2392
AlwI	GGATC	3 cut(s)	370, 475, 786
AlwNI	CAGNNNCTG	2 cut(s)	1362, 2024
Aor51HI	AGCGCT	1 cut(s)	590
ApaI	GGGCCC	1 cut(s)	2298
ApeKI	GCWGC	4 cut(s)	1303, 1322, 1937, 2204
ApoI	RAATTY	3 cut(s)	953, 1945, 2373
AseI	ATTAAT	1 cut(s)	1106
Asp700I	GAANNNNTTC	1 cut(s)	810
AspLEI	GCGC	1 cut(s)	591
AspS9I	GGNCC	6 cut(s)	206, 437, 755, 1645, 2294, 2295
AsuC2I	CCSGG	1 cut(s)	1463
AsuHPI	GGTGA	7 cut(s)	79, 143, 931, 1421, 1585, 1850, 2204
AvaII	GGWCC	3 cut(s)	206, 437, 1645
BaeGI	GKGCMC	1 cut(s)	2298
BaeI	ACNNNNGTAYC	2 cut(s)	461, 494
BalI	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
BanII	GRGCYC	2 cut(s)	1821, 2298
BbsI	GAAGAC	2 cut(s)	1528, 1535
Bbv12I	GWGCWC	1 cut(s)	1821
BbvI	GCAGC	4 cut(s)	1309, 1315, 1924, 2216
BccI	CCATC	8 cut(s)	156, 304, 815, 1178, 1274, 1697, 2183, 2271
BceAI	ACGGC	1 cut(s)	1553
BciT130I	CCWGG	7 cut(s)	126, 198, 232, 641, 1487, 1492, 2019
BciVI	GTATCC	1 cut(s)	489
BclI	TGATCA	1 cut(s)	138
BcnI	CCSGG	1 cut(s)	1463
BcoDI	GTCTC	3 cut(s)	1114, 2039, 2392
BfaI	CTAG	5 cut(s)	563, 974, 1878, 2201, 2346
BfoI	RGCGCY	1 cut(s)	592
BfuAI	ACCTGC	2 cut(s)	300, 1618
BfuI	GTATCC	1 cut(s)	489
BglI	GCCNNNNNGGC	1 cut(s)	1662
BisI	GCNGC	5 cut(s)	1304, 1323, 1938, 1999, 2205
BlsI	GCNGC	5 cut(s)	1305, 1324, 1939, 2000, 2206
Bme1390I	CCNGG	8 cut(s)	126, 198, 232, 641, 1463, 1487, 1492, 2019
Bme18I	GGWCC	3 cut(s)	206, 437, 1645
BmgT120I	GGNCC	6 cut(s)	206, 437, 755, 1645, 2294, 2295
BmiI	GGNNCC	3 cut(s)	438, 1647, 2296
BmrFI	CCNGG	8 cut(s)	126, 198, 232, 641, 1463, 1487, 1492, 2019
BmrI	ACTGGG	2 cut(s)	112, 1594
BmsI	GCATC	5 cut(s)	747, 1249, 1293, 1860, 2295
BmuI	ACTGGG	2 cut(s)	112, 1594
BoxI	GACNNNNGTC	1 cut(s)	435
BpiI	GAAGAC	2 cut(s)	1528, 1535
BpmI	CTGGAG	4 cut(s)	93, 1254, 1533, 1784
Bpu10I	CCTNAGC	2 cut(s)	309, 2013
BpuEI	CTTGAG	6 cut(s)	155, 821, 1544, 1607, 2063, 2195
BpuMI	CCSGG	1 cut(s)	1463
Bsa29I	ATCGAT	1 cut(s)	690
BsaJI	CCNNGG	9 cut(s)	125, 231, 352, 639, 788, 1485, 1554, 1834, 1856
Bsc4I	CCNNNNNNNGG	9 cut(s)	203, 328, 434, 461, 494, 1491, 1967, 2018, 2059
Bse1I	ACTGG	7 cut(s)	47, 107, 209, 508, 1367, 1589, 2368
Bse3DI	GCAATG	1 cut(s)	1831
BseBI	CCWGG	7 cut(s)	126, 198, 232, 641, 1487, 1492, 2019
BseCI	ATCGAT	1 cut(s)	690
BseDI	CCNNGG	9 cut(s)	125, 231, 352, 639, 788, 1485, 1554, 1834, 1856
BseGI	GGATG	7 cut(s)	112, 718, 895, 1225, 1855, 2081, 2275
BseLI	CCNNNNNNNGG	9 cut(s)	203, 328, 434, 461, 494, 1491, 1967, 2018, 2059
BseMI	GCAATG	1 cut(s)	1831
BseMII	CTCAG	9 cut(s)	300, 332, 814, 831, 1060, 1109, 1681, 2004, 2349
BseNI	ACTGG	7 cut(s)	47, 107, 209, 508, 1367, 1589, 2368
BseSI	GKGCMC	1 cut(s)	2298
BseXI	GCAGC	4 cut(s)	1309, 1315, 1924, 2216
BseYI	CCCAGC	3 cut(s)	1540, 2085, 2327
BsgI	GTGCAG	1 cut(s)	228
BshVI	ATCGAT	1 cut(s)	690
BsiHKAI	GWGCWC	1 cut(s)	1821
BsiSI	CCGG	1 cut(s)	1462
BslFI	GGGAC	4 cut(s)	398, 770, 1201, 1478
BslI	CCNNNNNNNGG	9 cut(s)	203, 328, 434, 461, 494, 1491, 1967, 2018, 2059
BsmAI	GTCTC	3 cut(s)	1114, 2039, 2392
BsmBI	CGTCTC	1 cut(s)	1114
BsmFI	GGGAC	4 cut(s)	398, 770, 1201, 1478
Bsp120I	GGGCCC	1 cut(s)	2294
Bsp1286I	GDGCHC	2 cut(s)	1821, 2298
Bsp143I	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
Bsp19I	CCATGG	3 cut(s)	1554, 1834, 1856
BspACI	CCGC	3 cut(s)	943, 1822, 1999
BspCNI	CTCAG	9 cut(s)	301, 333, 813, 830, 1059, 1110, 1680, 2005, 2348
BspDI	ATCGAT	1 cut(s)	690
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	3 cut(s)	438, 1647, 2296
BspMI	ACCTGC	2 cut(s)	300, 1618
BspPI	GGATC	3 cut(s)	370, 475, 786
BspQI	GCTCTTC	2 cut(s)	330, 1809
BsrDI	GCAATG	1 cut(s)	1831
BsrI	ACTGG	7 cut(s)	47, 107, 209, 508, 1367, 1589, 2368
BssECI	CCNNGG	9 cut(s)	125, 231, 352, 639, 788, 1485, 1554, 1834, 1856
BssMI	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
BssT1I	CCWWGG	4 cut(s)	788, 1554, 1834, 1856
Bst2UI	CCWGG	7 cut(s)	126, 198, 232, 641, 1487, 1492, 2019
Bst4CI	ACNGT	6 cut(s)	91, 206, 1004, 1416, 1534, 2384
Bst6I	CTCTTC	5 cut(s)	330, 487, 888, 1809, 2103
BstAPI	GCANNNNNTGC	1 cut(s)	1610
BstC8I	GCNNGC	9 cut(s)	371, 451, 545, 827, 915, 971, 1308, 1602, 1969
BstDSI	CCRYGG	4 cut(s)	352, 1554, 1834, 1856
BstENI	CCTNNNNNAGG	1 cut(s)	2016
BstF5I	GGATG	7 cut(s)	112, 718, 895, 1225, 1855, 2081, 2275
BstH2I	RGCGCY	1 cut(s)	592
BstHHI	GCGC	1 cut(s)	591
BstKTI	GATC	7 cut(s)	141, 365, 470, 671, 724, 781, 1093
BstMAI	GTCTC	3 cut(s)	1114, 2039, 2392
BstMBI	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
BstNI	CCWGG	7 cut(s)	126, 198, 232, 641, 1487, 1492, 2019
BstPAI	GACNNNNGTC	1 cut(s)	435
BstSCI	CCNGG	8 cut(s)	124, 196, 230, 639, 1461, 1485, 1490, 2017
BstSLI	GKGCMC	1 cut(s)	2298
BstV1I	GCAGC	4 cut(s)	1309, 1315, 1924, 2216
BstV2I	GAAGAC	2 cut(s)	1528, 1535
Bsu15I	ATCGAT	1 cut(s)	690
BsuI	GTATCC	1 cut(s)	489
BsuTUI	ATCGAT	1 cut(s)	690
BtgI	CCRYGG	4 cut(s)	352, 1554, 1834, 1856
BtsCI	GGATG	7 cut(s)	112, 718, 895, 1225, 1855, 2081, 2275
BtsI	GCAGTG	2 cut(s)	1961, 2022
BtsIMutI	CAGTG	7 cut(s)	1054, 1360, 1740, 1961, 2022, 2361, 2389
BveI	ACCTGC	2 cut(s)	300, 1618
Cac8I	GCNNGC	9 cut(s)	371, 451, 545, 827, 915, 971, 1308, 1602, 1969
CaiI	CAGNNNCTG	2 cut(s)	1362, 2024
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	1 cut(s)	591
Cfr13I	GGNCC	6 cut(s)	206, 437, 755, 1645, 2294, 2295
ClaI	ATCGAT	1 cut(s)	690
CseI	GACGC	1 cut(s)	1109
Csp6I	GTAC	1 cut(s)	716
CviQI	GTAC	1 cut(s)	716
DpnI	GATC	7 cut(s)	140, 364, 469, 670, 723, 780, 1092
DpnII	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
EaeI	YGGCCR	4 cut(s)	595, 1308, 1488, 1862
Eam1104I	CTCTTC	5 cut(s)	330, 487, 888, 1809, 2103
EarI	CTCTTC	5 cut(s)	330, 487, 888, 1809, 2103
Ecl136II	GAGCTC	1 cut(s)	1819
Eco130I	CCWWGG	4 cut(s)	788, 1554, 1834, 1856
Eco147I	AGGCCT	1 cut(s)	287
Eco24I	GRGCYC	2 cut(s)	1821, 2298
Eco47I	GGWCC	3 cut(s)	206, 437, 1645
Eco47III	AGCGCT	1 cut(s)	590
Eco53kI	GAGCTC	1 cut(s)	1819
Eco57I	CTGAAG	2 cut(s)	1278, 2169
EcoICRI	GAGCTC	1 cut(s)	1819
EcoNI	CCTNNNNNAGG	1 cut(s)	2016
EcoRI	GAATTC	1 cut(s)	2373
EcoRII	CCWGG	7 cut(s)	124, 196, 230, 639, 1485, 1490, 2017
EcoT14I	CCWWGG	4 cut(s)	788, 1554, 1834, 1856
EcoT38I	GRGCYC	2 cut(s)	1821, 2298
ErhI	CCWWGG	4 cut(s)	788, 1554, 1834, 1856
Esp3I	CGTCTC	1 cut(s)	1114
FalI	AAGNNNNNCTT	2 cut(s)	1520, 1552
FaqI	GGGAC	4 cut(s)	398, 770, 1201, 1478
FauI	CCCGC	1 cut(s)	950
FauNDI	CATATG	2 cut(s)	625, 1913
FbaI	TGATCA	1 cut(s)	138
Fnu4HI	GCNGC	5 cut(s)	1304, 1323, 1938, 1999, 2205
FokI	GGATG	7 cut(s)	119, 725, 902, 1212, 1862, 2068, 2282
FriOI	GRGCYC	2 cut(s)	1821, 2298
Fsp4HI	GCNGC	5 cut(s)	1304, 1323, 1938, 1999, 2205
FspBI	CTAG	5 cut(s)	563, 974, 1878, 2201, 2346
GlaI	GCGC	1 cut(s)	590
GluI	GCNGC	5 cut(s)	1304, 1323, 1938, 1999, 2205
GsaI	CCCAGC	3 cut(s)	1544, 2089, 2331
GsuI	CTGGAG	4 cut(s)	93, 1254, 1533, 1784
HaeII	RGCGCY	1 cut(s)	592
HapII	CCGG	1 cut(s)	1462
HgaI	GACGC	1 cut(s)	1109
HhaI	GCGC	1 cut(s)	591
Hin6I	GCGC	1 cut(s)	589
HinP1I	GCGC	1 cut(s)	589
HincII	GTYRAC	2 cut(s)	925, 934
HindII	GTYRAC	2 cut(s)	925, 934
HindIII	AAGCTT	2 cut(s)	1314, 1442
HinfI	GANTC	9 cut(s)	110, 390, 424, 994, 1334, 1790, 2004, 2217, 2358
HpaI	GTTAAC	2 cut(s)	925, 934
HpaII	CCGG	1 cut(s)	1462
HphI	GGTGA	7 cut(s)	79, 143, 931, 1421, 1585, 1850, 2204
Hpy166II	GTNNAC	5 cut(s)	238, 925, 934, 2181, 2357
Hpy8I	GTNNAC	5 cut(s)	238, 925, 934, 2181, 2357
HpyAV	CCTTC	6 cut(s)	725, 956, 1229, 1823, 1840, 2074
HpyCH4III	ACNGT	6 cut(s)	91, 206, 1004, 1416, 1534, 2384
HpyCH4IV	ACGT	3 cut(s)	600, 704, 1776
HpySE526I	ACGT	3 cut(s)	600, 704, 1776
HspAI	GCGC	1 cut(s)	589
Ksp22I	TGATCA	1 cut(s)	138
KspAI	GTTAAC	2 cut(s)	925, 934
Kzo9I	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
LguI	GCTCTTC	2 cut(s)	330, 1809
LmnI	GCTCC	5 cut(s)	660, 793, 1237, 1824, 2094
Lsp1109I	GCAGC	4 cut(s)	1309, 1315, 1924, 2216
LweI	GCATC	5 cut(s)	747, 1249, 1293, 1860, 2295
MaeI	CTAG	5 cut(s)	563, 974, 1878, 2201, 2346
MaeII	ACGT	3 cut(s)	600, 704, 1776
MaeIII	GTNAC	4 cut(s)	251, 315, 1738, 1838
MalI	GATC	7 cut(s)	140, 364, 469, 670, 723, 780, 1092
MboI	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
MfeI	CAATTG	2 cut(s)	96, 1206
MhlI	GDGCHC	2 cut(s)	1821, 2298
MlsI	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
MluNI	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
MlyI	GAGTC	4 cut(s)	119, 399, 433, 2352
MmeI	TCCRAC	2 cut(s)	303, 1790
Mox20I	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
MroXI	GAANNNNTTC	1 cut(s)	810
MscI	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
MseI	TTAA	9 cut(s)	603, 773, 861, 924, 933, 1065, 1106, 1214, 1367
MslI	CAYNNNNRTG	2 cut(s)	1245, 1559
Msp20I	TGGCCA	4 cut(s)	597, 1310, 1490, 1864
MspA1I	CMGCKG	1 cut(s)	1306
MspI	CCGG	1 cut(s)	1462
MspR9I	CCNGG	8 cut(s)	126, 198, 232, 641, 1463, 1487, 1492, 2019
MunI	CAATTG	2 cut(s)	96, 1206
MvaI	CCWGG	7 cut(s)	126, 198, 232, 641, 1487, 1492, 2019
NciI	CCSGG	1 cut(s)	1463
NcoI	CCATGG	3 cut(s)	1554, 1834, 1856
NdeI	CATATG	2 cut(s)	625, 1913
NdeII	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
NlaIV	GGNNCC	3 cut(s)	438, 1647, 2296
NmuCI	GTSAC	2 cut(s)	1738, 1838
PagI	TCATGA	1 cut(s)	1096
PceI	AGGCCT	1 cut(s)	287
PciSI	GCTCTTC	2 cut(s)	330, 1809
PdmI	GAANNNNTTC	1 cut(s)	810
PfeI	GAWTC	5 cut(s)	994, 1334, 1790, 2004, 2217
PflFI	GACNNNGTC	2 cut(s)	204, 389
PfoI	TCCNGGA	2 cut(s)	196, 1461
PkrI	GCNGC	5 cut(s)	1305, 1324, 1939, 2000, 2206
PleI	GAGTC	4 cut(s)	118, 398, 432, 2352
PpsI	GAGTC	4 cut(s)	118, 398, 432, 2352
PshAI	GACNNNNGTC	1 cut(s)	435
PshBI	ATTAAT	1 cut(s)	1106
PsiI	TTATAA	2 cut(s)	1397, 1578
Psp124BI	GAGCTC	1 cut(s)	1821
Psp6I	CCWGG	7 cut(s)	124, 196, 230, 639, 1485, 1490, 2017
PspFI	CCCAGC	3 cut(s)	1540, 2085, 2327
PspGI	CCWGG	7 cut(s)	124, 196, 230, 639, 1485, 1490, 2017
PspN4I	GGNNCC	3 cut(s)	438, 1647, 2296
PspOMI	GGGCCC	1 cut(s)	2294
PspPI	GGNCC	6 cut(s)	206, 437, 755, 1645, 2294, 2295
PstNI	CAGNNNCTG	2 cut(s)	1362, 2024
PsyI	GACNNNGTC	2 cut(s)	204, 389
PvuII	CAGCTG	1 cut(s)	1306
RsaI	GTAC	1 cut(s)	717
RsaNI	GTAC	1 cut(s)	716
RseI	CAYNNNNRTG	2 cut(s)	1245, 1559
SacI	GAGCTC	1 cut(s)	1821
SapI	GCTCTTC	2 cut(s)	330, 1809
SaqAI	TTAA	9 cut(s)	603, 773, 861, 924, 933, 1065, 1106, 1214, 1367
SatI	GCNGC	5 cut(s)	1304, 1323, 1938, 1999, 2205
Sau3AI	GATC	7 cut(s)	138, 362, 467, 668, 721, 778, 1090
Sau96I	GGNCC	6 cut(s)	206, 437, 755, 1645, 2294, 2295
SchI	GAGTC	4 cut(s)	119, 399, 433, 2352
ScrFI	CCNGG	8 cut(s)	126, 198, 232, 641, 1463, 1487, 1492, 2019
SduI	GDGCHC	2 cut(s)	1821, 2298
SfaNI	GCATC	5 cut(s)	747, 1249, 1293, 1860, 2295
SinI	GGWCC	3 cut(s)	206, 437, 1645
SmiMI	CAYNNNNRTG	2 cut(s)	1245, 1559
SmlI	CTYRAG	6 cut(s)	170, 836, 1523, 1622, 2042, 2174
SmoI	CTYRAG	6 cut(s)	170, 836, 1523, 1622, 2042, 2174
SseBI	AGGCCT	1 cut(s)	287
SsiI	CCGC	3 cut(s)	943, 1822, 1999
SspI	AATATT	1 cut(s)	1748
SspMI	CTAG	5 cut(s)	563, 974, 1878, 2201, 2346
SstI	GAGCTC	1 cut(s)	1821
StuI	AGGCCT	1 cut(s)	287
StyD4I	CCNGG	8 cut(s)	124, 196, 230, 639, 1461, 1485, 1490, 2017
StyI	CCWWGG	4 cut(s)	788, 1554, 1834, 1856
TaaI	ACNGT	6 cut(s)	91, 206, 1004, 1416, 1534, 2384
TaiI	ACGT	3 cut(s)	603, 707, 1779
TaqI	TCGA	4 cut(s)	5, 508, 690, 1287
TatI	WGTACW	1 cut(s)	715
TauI	GCSGC	1 cut(s)	2001
TfiI	GAWTC	5 cut(s)	994, 1334, 1790, 2004, 2217
Tru1I	TTAA	9 cut(s)	603, 773, 861, 924, 933, 1065, 1106, 1214, 1367
Tru9I	TTAA	9 cut(s)	603, 773, 861, 924, 933, 1065, 1106, 1214, 1367
TscAI	CASTG	7 cut(s)	1054, 1367, 1747, 1961, 2029, 2368, 2389
TseFI	GTSAC	2 cut(s)	1738, 1838
TseI	GCWGC	4 cut(s)	1303, 1322, 1937, 2204
Tsp45I	GTSAC	2 cut(s)	1738, 1838
TspGWI	ACGGA	2 cut(s)	341, 902
TspRI	CASTG	7 cut(s)	1054, 1367, 1747, 1961, 2029, 2368, 2389
Tth111I	GACNNNGTC	2 cut(s)	204, 389
VpaK11BI	GGWCC	3 cut(s)	206, 437, 1645
VspI	ATTAAT	1 cut(s)	1106
XagI	CCTNNNNNAGG	1 cut(s)	2016
XapI	RAATTY	3 cut(s)	953, 1945, 2373
XbaI	TCTAGA	2 cut(s)	562, 2345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2099
XmnI	GAANNNNTTC	1 cut(s)	810
XspI	CTAG	5 cut(s)	563, 974, 1878, 2201, 2346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.