Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0012732

Physical Location & Seq

Genomic Coordinates Forward (+)

12184167 .. 12188567

Gene Structure 4401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g16410.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGGGTGGGTTCTGTCCAAGTTCAACAACAGCGGTGAGTAGAGTGATGGAAGCATGTTGTTTGCAGGACAAGGAGAAGGACAATGACGACGAGAAGCCAGATTACATGGTGAGTGGGAGCAACAGAATCAGAGGAAAAGTTGTGTTGATGAAGAAGAATGTGTTGGACTTCAACGACCTCAAAGCTTCGTTCGTTGATAGAATCCATGAGCTCTTGGGCAAAGGTGTTTCCATGCAGCTCATTAGTGCCACTCATCCTGAACCAGCAGCAAATGGATTGAAATCGAGAGGGAAGCTTGGAAAGGTTGCTTACTTGGAGAAATGGGCTACAACCATTACATCGTTGTCGGCCGGAGAAACTAGTTTCACCATTTCCTTGGATTGGGATGAGTCCCATGGAGTTCCCGGGGCTTTGCTGATCAGATCCCATCACCATAGCCAATTCTACCTCAAGACAATAACATTAGAAGATGTTCCCGAGCACGGTCAACTCCATTTTGTCTGCAATTCCTGGGTATACCCAGCACATCGTTACAAGTACAACCGGATATTTTTCCCCAACATGGCCTACCTGCCATCTCAAACACCAGAGCTGCTACACCCTTACAGGGAAGAAGAACTCGCCAATCTCCGAGGGAGTGGATCAGGCGAGCTAAAGGAGTGGGACAGAGTCTATGACTATGCTTACTACAATGATTTAGGGAGTCCAGACAAGGGTCCAAAATATGCCCGCCCTATACTTGGTGGGTCGTACGAGTATCCATATCCAAGAAGAGGAAGAACTGGTCGAAAAACAACTAAAACCGACCCCAATTCCGAGAGCAGACTGCCGCTTCTAAGTCTAGACATTTATGTTCCAAGAGATGAGCGGTTTGGCCACGTGAAGTTTTCCGATTTTCTTGCCTATGGCCTGAAATCCCTAGTTCAAATATTGCTTCCAGAACTCAAGTCTTTGTGTGATAAAACTATCAATGAGTTTGACACCTTCGATGACGTAGTTAATCTCTACGAGGGAGGTATCAAGTTACCAAATGGGCCTACACTGAAGAAAATAAGGGAGCGCATCCCTTGGGAGCTGCTTAAGGAACTGATTCGCTCAGATGGCGAGCGATTTCTCAAGTTTCCAATGCCTGACGTGATTAAAAAAGATAGGTCTGCATGGAGGACAGATGAAGAATTTGGACGAGAAATGCTAGCAGGAGTGAACCCTGTTAACATCACCCGCCTCGAAGAGTTTCCCCCAGTCAGTAAGCTAGACCCTGAAGTATATGGGAATCAGAACAGTTCGATACGAGAAGAGCACATAAAAGGCAACATGAATGGCCTCACTGTTGAAGAGGCAACTGAAAAGAACAGGCTATTCATATTAGATCATCATGATGCATTAATGTTATACCTGAGGCAAATAAACTCAACGGACACAAAGACGTATGCCACAAGAACTCTTCTCTTGCTGCAAGAAGACGGGACGTTGAAGCCTTTGGCAATTGAGCTAAGCTTACCACATCCACAAGGGGACCGTCATGGGGCTGTCAGCAAAGTTTTCACTCCACCAGGACAAGGCAATGAACGCATCGAGGAGTCAGTGTGGCAGCTTGCCAAAGCTTATGCTGCTGTAAACGATTCTGGCTATCATCAACTTATCAGCCACTGGTTAAACACACATGCTGTGATAGAGCCATTTGTGATTGCAACAAATAGACAGTTGAGTGTGCTTCATCCGATACATAAGCTTTTGCATCCGCACTTCCGGGACACAATGAACATAAATGCCCTGGCCAGGCAAATCCTCATCAATGCCGGTGGGGTGCTTGAGAAAACAGTCTTCCCAGGTCGATTCTCCATGGAAATGTCAGCTGTTATTTATAAGAGCTGGGTACTTACCGAGCAGGCATTACCTGCTGACTTGCTCAAGAGAGGAATGGCAGTTCCAGATACGACTTGTCCTCATGGCCTGAGACTTCTGATTGAAGACTACCCGTTTGCTGTTGATGGGCTAGAAATTTGGTCGGCGATTGAAACTTGGGTTAATGAATACTGCTCTTTGTACTACCAATCGGACGATGTGGTCCAAGGTGATTCTGAACTCCAGAGCTGGTGGACAGAGCTCCGCAATATAGGCCACGGTGACAAGAAGAATGAACCGTGGTGGCCTAAGATGCAAACAAGAGCTGAACTTATCGAATCATGTACCATAATCATATGGGTGGCTTCTGCCCTCCATGCAGCGGTCAATTTCGGGCAATACTCTTACGCTGGCTACCTCCCTAACCGCCCAACTGTAAGCCGACGTTTCATGCCTGAGCCAGGCACTGCTGAATATTATGAGCTTGTGTCGTCCCCCGACACAGCTTTCCTTAAAACAATTACAGCTCAGTTCCAAACTCTCCTTGGTGTATCTCTGATAGAGATTTTATCACGACAATCGACTGATGAGGTTTATCTTGGGCAAAACGATACTGCTGAGTGGACTTCAGATGCTGAAGCACTAACAGCATTTGCAAGATTCGGAGAGAAGCTAATGGACATTGAAAAGAGAATCGATGCAAGGAACAAGGATAATAGATTGAAGAACAGAGTTGGGCCTGTAGACGTGCCTTATACCTTGCTCCACCCTAACACATCAGACAAGAGTAGAGAGGGTGGACTGACTGGAAAAGGAATTCCCAACAGTGTCTCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0034440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0051213 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1900366 GO:1905392 GO:1905393 GO:1990136 GO:2000068

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

895

Amino Acids

101.27

Weight (kDa)

6.02

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22400
fragaria_vesca	FvH4_4g15250 FvH4_4g15250 FvH4_4g15250
malus_domestica	MD13G1191200.v1.1 MD16G1191300.v1.1
prunus_persica	Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1
pyrus_communis	pycom13g16410 pycom16g16100
rosa_chinensis	RchiOBHm_Chr4g0416591
rosa_laevigata	RLG00000007969
rosa_roxburghii	Rroxscaffold_5G00360470
rosa_rugosa	Rorug04G0143200
rosa_samantha	Rh4BG203100 Rh4CG216500
rosa_wichuraiana	Rw4G017400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1866
AasI	GACNNNNNNGTC	1 cut(s)	2066
Acc36I	ACCTGC	2 cut(s)	579, 1906
AccBSI	CCGCTC	1 cut(s)	868
AccI	GTMKAC	2 cut(s)	516, 2589
AciI	CCGC	9 cut(s)	32, 730, 830, 868, 1222, 1742, 2110, 2228, 2272
AclWI	GGATC	2 cut(s)	417, 649
AcoI	YGGCCR	3 cut(s)	348, 874, 1776
AcsI	RAATTY	3 cut(s)	1175, 2001, 2661
AcuI	CTGAAG	4 cut(s)	1064, 1281, 2457, 2502
AcvI	CACGTG	1 cut(s)	880
AfaI	GTAC	5 cut(s)	539, 752, 1878, 2048, 2191
AflII	CTTAAG	1 cut(s)	1079
AhlI	ACTAGT	1 cut(s)	359
AjiI	CACGTC	2 cut(s)	1135, 2593
AjnI	CCWGG	6 cut(s)	509, 1552, 1773, 1778, 1828, 2305
AjuI	GAANNNNNNNTTGG	2 cut(s)	146, 178
AloI	GAACNNNNNNTCC	2 cut(s)	1911, 1943
Alw21I	GWGCWC	4 cut(s)	213, 483, 1302, 2109
Alw26I	GTCTC	2 cut(s)	1951, 2680
AlwI	GGATC	2 cut(s)	417, 649
AlwNI	CAGNNNCTG	3 cut(s)	1650, 2312, 2480
Ama87I	CYCGRG	2 cut(s)	404, 476
ApeKI	GCWGC	8 cut(s)	235, 266, 592, 1075, 1453, 1591, 1610, 2225
ApoI	RAATTY	3 cut(s)	1175, 2001, 2661
ArsI	GACNNNNNNTTYG	2 cut(s)	1964, 1996
AseI	ATTAAT	1 cut(s)	1385
Asp700I	GAANNNNTTC	3 cut(s)	471, 1089, 1233
AspLEI	GCGC	1 cut(s)	1062
AspS9I	GGNCC	5 cut(s)	716, 1034, 1516, 2068, 2582
AsuC2I	CCSGG	3 cut(s)	405, 406, 1751
AsuHPI	GGTGA	7 cut(s)	46, 121, 358, 422, 1210, 2087, 2138
AsuNHI	GCTAGC	1 cut(s)	1192
AvaI	CYCGRG	2 cut(s)	404, 476
AvaII	GGWCC	3 cut(s)	716, 1516, 2068
AxyI	CCTNAGG	1 cut(s)	1397
BalI	TGGCCA	2 cut(s)	876, 1778
BanII	GRGCYC	2 cut(s)	213, 2109
BarI	GAAGNNNNNNTAC	2 cut(s)	86, 118
BbrPI	CACGTG	1 cut(s)	880
BbsI	GAAGAC	3 cut(s)	1467, 1816, 1977
Bbv12I	GWGCWC	4 cut(s)	213, 483, 1302, 2109
BbvI	GCAGC	8 cut(s)	247, 278, 579, 1062, 1440, 1597, 1603, 2237
BccI	CCATC	5 cut(s)	40, 435, 583, 1094, 1985
BcgI	CGANNNNNNTGC	2 cut(s)	881, 915
BciT130I	CCWGG	6 cut(s)	511, 1554, 1775, 1780, 1830, 2307
BciVI	GTATCC	1 cut(s)	768
BclI	TGATCA	1 cut(s)	417
BcnI	CCSGG	3 cut(s)	405, 406, 1751
BcoDI	GTCTC	2 cut(s)	1951, 2680
BcuI	ACTAGT	1 cut(s)	359
BfaI	CTAG	6 cut(s)	360, 842, 920, 1193, 1253, 1997
BfmI	CTRYAG	1 cut(s)	2586
BfrI	CTTAAG	1 cut(s)	1079
BfuAI	ACCTGC	2 cut(s)	579, 1906
BfuI	GTATCC	1 cut(s)	768
BisI	GCNGC	9 cut(s)	236, 267, 593, 830, 1076, 1454, 1592, 1611, 2226
BlpI	GCTNAGC	1 cut(s)	1493
BlsI	GCNGC	9 cut(s)	237, 268, 594, 831, 1077, 1455, 1593, 1612, 2227
Bme1390I	CCNGG	9 cut(s)	405, 406, 511, 1554, 1751, 1775, 1780, 1830, 2307
Bme18I	GGWCC	3 cut(s)	716, 1516, 2068
BmeT110I	CYCGRG	2 cut(s)	404, 476
BmgBI	CACGTC	2 cut(s)	1135, 2593
BmgT120I	GGNCC	5 cut(s)	716, 1034, 1516, 2068, 2582
BmiI	GGNNCC	2 cut(s)	717, 1517
BmrFI	CCNGG	9 cut(s)	405, 406, 511, 1554, 1751, 1775, 1780, 1830, 2307
BmrI	ACTGGG	1 cut(s)	1235
BmsI	GCATC	7 cut(s)	1071, 1369, 1581, 1747, 2148, 2467, 2533
BmtI	GCTAGC	1 cut(s)	1196
BmuI	ACTGGG	1 cut(s)	1235
BoxI	GACNNNNGTC	1 cut(s)	714
BpiI	GAAGAC	3 cut(s)	1467, 1816, 1977
BpmI	CTGGAG	1 cut(s)	2072
Bpu10I	CCTNAGC	1 cut(s)	2301
Bpu1102I	GCTNAGC	1 cut(s)	1493
BpuEI	CTTGAG	5 cut(s)	434, 929, 1100, 1832, 1895
BpuMI	CCSGG	3 cut(s)	405, 406, 1751
Bsa29I	ATCGAT	1 cut(s)	2541
BsaAI	YACGTR	1 cut(s)	880
BsaBI	GATNNNNATC	1 cut(s)	280
BsaWI	WCCGGW	1 cut(s)	543
BsaXI	ACNNNNNCTCC	2 cut(s)	1571, 1601
Bse118I	RCCGGY	1 cut(s)	1799
Bse1I	ACTGG	4 cut(s)	787, 1241, 1655, 2656
Bse21I	CCTNAGG	1 cut(s)	1397
Bse3DI	GCAATG	1 cut(s)	1570
Bse8I	GATNNNNATC	1 cut(s)	280
BseBI	CCWGG	6 cut(s)	511, 1554, 1775, 1780, 1830, 2307
BseCI	ATCGAT	1 cut(s)	2541
BseGI	GGATG	6 cut(s)	253, 391, 1062, 1504, 1717, 1738
BseJI	GATNNNNATC	1 cut(s)	280
BseMI	GCAATG	1 cut(s)	1570
BseMII	CTCAG	6 cut(s)	1110, 1388, 1946, 2292, 2387, 2454
BseNI	ACTGG	4 cut(s)	787, 1241, 1655, 2656
BseRI	GAGGAG	1 cut(s)	1592
BseX3I	CGGCCG	1 cut(s)	348
BseXI	GCAGC	8 cut(s)	247, 278, 579, 1062, 1440, 1597, 1603, 2237
BseYI	CCCAGC	2 cut(s)	520, 1872
Bsh1285I	CGRYCG	1 cut(s)	351
BshVI	ATCGAT	1 cut(s)	2541
BsiEI	CGRYCG	1 cut(s)	351
BsiHKAI	GWGCWC	4 cut(s)	213, 483, 1302, 2109
BsiHKCI	CYCGRG	2 cut(s)	404, 476
BsiSI	CCGG	5 cut(s)	351, 405, 544, 1750, 1800
BsiWI	CGTACG	1 cut(s)	750
BslFI	GGGAC	6 cut(s)	376, 677, 1480, 1529, 1766, 2323
BsmAI	GTCTC	2 cut(s)	1951, 2680
BsmFI	GGGAC	6 cut(s)	376, 677, 1480, 1529, 1766, 2323
BsoBI	CYCGRG	2 cut(s)	404, 476
Bsp1286I	GDGCHC	4 cut(s)	213, 483, 1302, 2109
Bsp143I	GATC	4 cut(s)	417, 422, 641, 1369
Bsp1720I	GCTNAGC	1 cut(s)	1493
Bsp19I	CCATGG	2 cut(s)	394, 1842
BspACI	CCGC	9 cut(s)	32, 730, 830, 868, 1222, 1742, 2110, 2228, 2272
BspCNI	CTCAG	6 cut(s)	1109, 1389, 1947, 2293, 2386, 2455
BspDI	ATCGAT	1 cut(s)	2541
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	2 cut(s)	717, 1517
BspMI	ACCTGC	2 cut(s)	579, 1906
BspOI	GCTAGC	1 cut(s)	1196
BspPI	GGATC	2 cut(s)	417, 649
BspQI	GCTCTTC	1 cut(s)	1290
BspTI	CTTAAG	1 cut(s)	1079
BsrBI	CCGCTC	1 cut(s)	868
BsrDI	GCAATG	1 cut(s)	1570
BsrFI	RCCGGY	1 cut(s)	1799
BsrI	ACTGG	4 cut(s)	787, 1241, 1655, 2656
BssAI	RCCGGY	1 cut(s)	1799
BssMI	GATC	4 cut(s)	417, 422, 641, 1369
BssNAI	GTATAC	1 cut(s)	517
BssT1I	CCWWGG	6 cut(s)	375, 394, 1067, 1842, 2071, 2389
Bst1107I	GTATAC	1 cut(s)	517
Bst2UI	CCWGG	6 cut(s)	511, 1554, 1775, 1780, 1830, 2307
Bst6I	CTCTTC	5 cut(s)	766, 1224, 1290, 1329, 1449
BstAFI	CTTAAG	1 cut(s)	1079
BstAPI	GCANNNNNTGC	1 cut(s)	1898
BstBAI	YACGTR	1 cut(s)	880
BstC8I	GCNNGC	7 cut(s)	650, 730, 1106, 1194, 1596, 1890, 2257
BstDEI	CTNAG	9 cut(s)	836, 1096, 1397, 1493, 1955, 2154, 2301, 2373, 2463
BstDSI	CCRYGG	4 cut(s)	394, 1842, 2122, 2144
BstENI	CCTNNNNNAGG	1 cut(s)	2304
BstF5I	GGATG	6 cut(s)	253, 391, 1062, 1504, 1717, 1738
BstHHI	GCGC	1 cut(s)	1062
BstKTI	GATC	4 cut(s)	420, 425, 644, 1372
BstMAI	GTCTC	2 cut(s)	1951, 2680
BstMBI	GATC	4 cut(s)	417, 422, 641, 1369
BstMCI	CGRYCG	1 cut(s)	351
BstMWI	GCNNNNNNNGC	8 cut(s)	1101, 1569, 1610, 1898, 2118, 2158, 2222, 2492
BstNI	CCWGG	6 cut(s)	511, 1554, 1775, 1780, 1830, 2307
BstNSI	RCATGY	2 cut(s)	57, 1667
BstPAI	GACNNNNGTC	1 cut(s)	714
BstSCI	CCNGG	9 cut(s)	403, 404, 509, 1552, 1749, 1773, 1778, 1828, 2305
BstSFI	CTRYAG	1 cut(s)	2586
BstV1I	GCAGC	8 cut(s)	247, 278, 579, 1062, 1440, 1597, 1603, 2237
BstV2I	GAAGAC	3 cut(s)	1467, 1816, 1977
BstX2I	RGATCY	1 cut(s)	422
BstXI	CCANNNNNNTGG	1 cut(s)	376
BstYI	RGATCY	1 cut(s)	422
BstZ17I	GTATAC	1 cut(s)	517
BstZI	CGGCCG	1 cut(s)	348
Bsu15I	ATCGAT	1 cut(s)	2541
Bsu36I	CCTNAGG	1 cut(s)	1397
BsuI	GTATCC	1 cut(s)	768
BsuTUI	ATCGAT	1 cut(s)	2541
BtgI	CCRYGG	4 cut(s)	394, 1842, 2122, 2144
BtrI	CACGTC	2 cut(s)	1135, 2593
BtsCI	GGATG	6 cut(s)	253, 391, 1062, 1504, 1717, 1738
BtsI	GCAGTG	1 cut(s)	2310
BtsIMutI	CAGTG	6 cut(s)	1040, 1326, 1590, 1648, 2310, 2677
BveI	ACCTGC	2 cut(s)	579, 1906
Cac8I	GCNNGC	7 cut(s)	650, 730, 1106, 1194, 1596, 1890, 2257
CaiI	CAGNNNCTG	3 cut(s)	1650, 2312, 2480
CciI	TCATGA	1 cut(s)	1375
CfoI	GCGC	1 cut(s)	1062
Cfr10I	RCCGGY	1 cut(s)	1799
Cfr13I	GGNCC	5 cut(s)	716, 1034, 1516, 2068, 2582
Cfr9I	CCCGGG	1 cut(s)	404
ClaI	ATCGAT	1 cut(s)	2541
Csp6I	GTAC	5 cut(s)	538, 751, 1877, 2047, 2190
CspCI	CAANNNNNGTGG	2 cut(s)	1783, 1818
CviQI	GTAC	5 cut(s)	538, 751, 1877, 2047, 2190
DdeI	CTNAG	9 cut(s)	836, 1096, 1397, 1493, 1955, 2154, 2301, 2373, 2463
DpnI	GATC	4 cut(s)	419, 424, 643, 1371
DpnII	GATC	4 cut(s)	417, 422, 641, 1369
DrdI	GACNNNNNNGTC	1 cut(s)	2066
DseDI	GACNNNNNNGTC	1 cut(s)	2066
EaeI	YGGCCR	3 cut(s)	348, 874, 1776
EagI	CGGCCG	1 cut(s)	348
Eam1104I	CTCTTC	5 cut(s)	766, 1224, 1290, 1329, 1449
EarI	CTCTTC	5 cut(s)	766, 1224, 1290, 1329, 1449
Ecl136II	GAGCTC	2 cut(s)	211, 2107
EclXI	CGGCCG	1 cut(s)	348
Eco130I	CCWWGG	6 cut(s)	375, 394, 1067, 1842, 2071, 2389
Eco24I	GRGCYC	2 cut(s)	213, 2109
Eco47I	GGWCC	3 cut(s)	716, 1516, 2068
Eco52I	CGGCCG	1 cut(s)	348
Eco53kI	GAGCTC	2 cut(s)	211, 2107
Eco57I	CTGAAG	4 cut(s)	1064, 1281, 2457, 2502
Eco72I	CACGTG	1 cut(s)	880
Eco81I	CCTNAGG	1 cut(s)	1397
Eco88I	CYCGRG	2 cut(s)	404, 476
EcoICRI	GAGCTC	2 cut(s)	211, 2107
EcoNI	CCTNNNNNAGG	1 cut(s)	2304
EcoRI	GAATTC	1 cut(s)	2661
EcoRII	CCWGG	6 cut(s)	509, 1552, 1773, 1778, 1828, 2305
EcoT14I	CCWWGG	6 cut(s)	375, 394, 1067, 1842, 2071, 2389
EcoT22I	ATGCAT	1 cut(s)	1384
EcoT38I	GRGCYC	2 cut(s)	213, 2109
ErhI	CCWWGG	6 cut(s)	375, 394, 1067, 1842, 2071, 2389
FaqI	GGGAC	6 cut(s)	376, 677, 1480, 1529, 1766, 2323
FauI	CCCGC	2 cut(s)	737, 1229
FauNDI	CATATG	1 cut(s)	2201
FbaI	TGATCA	1 cut(s)	417
FblI	GTMKAC	2 cut(s)	516, 2589
Fnu4HI	GCNGC	9 cut(s)	236, 267, 593, 830, 1076, 1454, 1592, 1611, 2226
FokI	GGATG	6 cut(s)	240, 398, 1049, 1491, 1704, 1725
FriOI	GRGCYC	2 cut(s)	213, 2109
Fsp4HI	GCNGC	9 cut(s)	236, 267, 593, 830, 1076, 1454, 1592, 1611, 2226
FspBI	CTAG	6 cut(s)	360, 842, 920, 1193, 1253, 1997
GlaI	GCGC	1 cut(s)	1061
GluI	GCNGC	9 cut(s)	236, 267, 593, 830, 1076, 1454, 1592, 1611, 2226
GsaI	CCCAGC	2 cut(s)	524, 1876
GsuI	CTGGAG	1 cut(s)	2072
HapII	CCGG	5 cut(s)	351, 405, 544, 1750, 1800
HhaI	GCGC	1 cut(s)	1062
Hin6I	GCGC	1 cut(s)	1060
HinP1I	GCGC	1 cut(s)	1060
HincII	GTYRAC	2 cut(s)	488, 1213
HindII	GTYRAC	2 cut(s)	488, 1213
HindIII	AAGCTT	5 cut(s)	183, 293, 1495, 1602, 1730
HpaI	GTTAAC	1 cut(s)	1213
HpaII	CCGG	5 cut(s)	351, 405, 544, 1750, 1800
HphI	GGTGA	7 cut(s)	46, 121, 358, 422, 1210, 2087, 2138
Hpy166II	GTNNAC	9 cut(s)	488, 517, 1204, 1213, 1618, 2100, 2469, 2590, 2645
Hpy8I	GTNNAC	9 cut(s)	488, 517, 1204, 1213, 1618, 2100, 2469, 2590, 2645
Hpy99I	CGWCG	2 cut(s)	92, 2292
HpyAV	CCTTC	2 cut(s)	70, 994
HpyCH4IV	ACGT	7 cut(s)	879, 993, 1134, 1427, 1469, 2290, 2592
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1101, 1569, 1610, 1898, 2118, 2158, 2222, 2492
HpyF3I	CTNAG	9 cut(s)	836, 1096, 1397, 1493, 1955, 2154, 2301, 2373, 2463
HpySE526I	ACGT	7 cut(s)	879, 993, 1134, 1427, 1469, 2290, 2592
HspAI	GCGC	1 cut(s)	1060
Ksp22I	TGATCA	1 cut(s)	417
KspAI	GTTAAC	1 cut(s)	1213
Kzo9I	GATC	4 cut(s)	417, 422, 641, 1369
LguI	GCTCTTC	1 cut(s)	1290
LmnI	GCTCC	5 cut(s)	117, 1057, 1072, 2112, 2613
Lsp1109I	GCAGC	8 cut(s)	247, 278, 579, 1062, 1440, 1597, 1603, 2237
LweI	GCATC	7 cut(s)	1071, 1369, 1581, 1747, 2148, 2467, 2533
MaeI	CTAG	6 cut(s)	360, 842, 920, 1193, 1253, 1997
MaeII	ACGT	7 cut(s)	879, 993, 1134, 1427, 1469, 2290, 2592
MaeIII	GTNAC	3 cut(s)	530, 1023, 2126
MalI	GATC	4 cut(s)	419, 424, 643, 1371
MbiI	CCGCTC	1 cut(s)	868
MboI	GATC	4 cut(s)	417, 422, 641, 1369
MfeI	CAATTG	1 cut(s)	1485
MflI	RGATCY	1 cut(s)	422
MhlI	GDGCHC	4 cut(s)	213, 483, 1302, 2109
MlsI	TGGCCA	2 cut(s)	876, 1778
MluCI	AATT	9 cut(s)	440, 505, 811, 1175, 1485, 2001, 2233, 2364, 2661
MluNI	TGGCCA	2 cut(s)	876, 1778
MlyI	GAGTC	4 cut(s)	398, 678, 712, 1589
MmeI	TCCRAC	1 cut(s)	144
Mox20I	TGGCCA	2 cut(s)	876, 1778
Mph1103I	ATGCAT	1 cut(s)	1384
MroXI	GAANNNNTTC	3 cut(s)	471, 1089, 1233
MscI	TGGCCA	2 cut(s)	876, 1778
MseI	TTAA	8 cut(s)	999, 1080, 1140, 1212, 1385, 1655, 2028, 2358
MslI	CAYNNNNRTG	3 cut(s)	1377, 1847, 2204
Msp20I	TGGCCA	2 cut(s)	876, 1778
MspA1I	CMGCKG	3 cut(s)	32, 1856, 2228
MspCI	CTTAAG	1 cut(s)	1079
MspI	CCGG	5 cut(s)	351, 405, 544, 1750, 1800
MspR9I	CCNGG	9 cut(s)	405, 406, 511, 1554, 1751, 1775, 1780, 1830, 2307
MunI	CAATTG	1 cut(s)	1485
MvaI	CCWGG	6 cut(s)	511, 1554, 1775, 1780, 1830, 2307
MwoI	GCNNNNNNNGC	8 cut(s)	1101, 1569, 1610, 1898, 2118, 2158, 2222, 2492
NciI	CCSGG	3 cut(s)	405, 406, 1751
NcoI	CCATGG	2 cut(s)	394, 1842
NdeI	CATATG	1 cut(s)	2201
NdeII	GATC	4 cut(s)	417, 422, 641, 1369
NheI	GCTAGC	1 cut(s)	1192
NlaIV	GGNNCC	2 cut(s)	717, 1517
NmuCI	GTSAC	1 cut(s)	2126
NsiI	ATGCAT	1 cut(s)	1384
NspI	RCATGY	2 cut(s)	57, 1667
PagI	TCATGA	1 cut(s)	1375
PciSI	GCTCTTC	1 cut(s)	1290
PdmI	GAANNNNTTC	3 cut(s)	471, 1089, 1233
Pfl23II	CGTACG	1 cut(s)	750
PflFI	GACNNNGTC	1 cut(s)	668
PfoI	TCCNGGA	1 cut(s)	1749
PkrI	GCNGC	9 cut(s)	237, 268, 594, 831, 1077, 1455, 1593, 1612, 2227
PleI	GAGTC	4 cut(s)	397, 677, 711, 1588
PmaCI	CACGTG	1 cut(s)	880
PmlI	CACGTG	1 cut(s)	880
PpsI	GAGTC	4 cut(s)	397, 677, 711, 1588
Ppu21I	YACGTR	1 cut(s)	880
PshAI	GACNNNNGTC	1 cut(s)	714
PshBI	ATTAAT	1 cut(s)	1385
PsiI	TTATAA	1 cut(s)	1866
Psp124BI	GAGCTC	2 cut(s)	213, 2109
Psp6I	CCWGG	6 cut(s)	509, 1552, 1773, 1778, 1828, 2305
PspCI	CACGTG	1 cut(s)	880
PspFI	CCCAGC	2 cut(s)	520, 1872
PspGI	CCWGG	6 cut(s)	509, 1552, 1773, 1778, 1828, 2305
PspLI	CGTACG	1 cut(s)	750
PspN4I	GGNNCC	2 cut(s)	717, 1517
PspPI	GGNCC	5 cut(s)	716, 1034, 1516, 2068, 2582
PstNI	CAGNNNCTG	3 cut(s)	1650, 2312, 2480
PsuI	RGATCY	1 cut(s)	422
PsyI	GACNNNGTC	1 cut(s)	668
PvuII	CAGCTG	1 cut(s)	1856
RsaI	GTAC	5 cut(s)	539, 752, 1878, 2048, 2191
RsaNI	GTAC	5 cut(s)	538, 751, 1877, 2047, 2190
RseI	CAYNNNNRTG	3 cut(s)	1377, 1847, 2204
SacI	GAGCTC	2 cut(s)	213, 2109
SapI	GCTCTTC	1 cut(s)	1290
SaqAI	TTAA	8 cut(s)	999, 1080, 1140, 1212, 1385, 1655, 2028, 2358
SatI	GCNGC	9 cut(s)	236, 267, 593, 830, 1076, 1454, 1592, 1611, 2226
Sau3AI	GATC	4 cut(s)	417, 422, 641, 1369
Sau96I	GGNCC	5 cut(s)	716, 1034, 1516, 2068, 2582
SchI	GAGTC	4 cut(s)	398, 678, 712, 1589
ScrFI	CCNGG	9 cut(s)	405, 406, 511, 1554, 1751, 1775, 1780, 1830, 2307
SduI	GDGCHC	4 cut(s)	213, 483, 1302, 2109
SfaNI	GCATC	7 cut(s)	1071, 1369, 1581, 1747, 2148, 2467, 2533
SfcI	CTRYAG	1 cut(s)	2586
SinI	GGWCC	3 cut(s)	716, 1516, 2068
SmaI	CCCGGG	1 cut(s)	406
SmiMI	CAYNNNNRTG	3 cut(s)	1377, 1847, 2204
SmlI	CTYRAG	6 cut(s)	449, 944, 1079, 1115, 1811, 1910
SmoI	CTYRAG	6 cut(s)	449, 944, 1079, 1115, 1811, 1910
SpeI	ACTAGT	1 cut(s)	359
Sse9I	AATT	9 cut(s)	440, 505, 811, 1175, 1485, 2001, 2233, 2364, 2661
SsiI	CCGC	9 cut(s)	32, 730, 830, 868, 1222, 1742, 2110, 2228, 2272
SspI	AATATT	2 cut(s)	930, 2321
SspMI	CTAG	6 cut(s)	360, 842, 920, 1193, 1253, 1997
SstI	GAGCTC	2 cut(s)	213, 2109
StyD4I	CCNGG	9 cut(s)	403, 404, 509, 1552, 1749, 1773, 1778, 1828, 2305
StyI	CCWWGG	6 cut(s)	375, 394, 1067, 1842, 2071, 2389
TaiI	ACGT	7 cut(s)	882, 996, 1137, 1430, 1472, 2293, 2595
TasI	AATT	9 cut(s)	440, 505, 811, 1175, 1485, 2001, 2233, 2364, 2661
TatI	WGTACW	2 cut(s)	537, 2046
TauI	GCSGC	1 cut(s)	832
Tru1I	TTAA	8 cut(s)	999, 1080, 1140, 1212, 1385, 1655, 2028, 2358
Tru9I	TTAA	8 cut(s)	999, 1080, 1140, 1212, 1385, 1655, 2028, 2358
TscAI	CASTG	6 cut(s)	1047, 1333, 1590, 1655, 2317, 2677
TseFI	GTSAC	1 cut(s)	2126
TseI	GCWGC	8 cut(s)	235, 266, 592, 1075, 1453, 1591, 1610, 2225
Tsp45I	GTSAC	1 cut(s)	2126
TspGWI	ACGGA	1 cut(s)	1430
TspMI	CCCGGG	1 cut(s)	404
TspRI	CASTG	6 cut(s)	1047, 1333, 1590, 1655, 2317, 2677
Tth111I	GACNNNGTC	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	1079
VpaK11BI	GGWCC	3 cut(s)	716, 1516, 2068
VspI	ATTAAT	1 cut(s)	1385
XagI	CCTNNNNNAGG	1 cut(s)	2304
XapI	RAATTY	3 cut(s)	1175, 2001, 2661
XbaI	TCTAGA	1 cut(s)	841
XceI	RCATGY	2 cut(s)	57, 1667
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2387
XmaI	CCCGGG	1 cut(s)	404
XmiI	GTMKAC	2 cut(s)	516, 2589
XmnI	GAANNNNTTC	3 cut(s)	471, 1089, 1233
XspI	CTAG	6 cut(s)	360, 842, 920, 1193, 1253, 1997
Zsp2I	ATGCAT	1 cut(s)	1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.