Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22400 |
| fragaria_vesca | FvH4_4g15250 FvH4_4g15250 FvH4_4g15250 |
| malus_domestica | MD13G1191200.v1.1 MD16G1191300.v1.1 |
| prunus_persica | Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 |
| pyrus_communis | pycom13g16410 pycom16g16100 |
| rosa_chinensis | RchiOBHm_Chr4g0416591 |
| rosa_laevigata | RLG00000007969 |
| rosa_roxburghii | Rroxscaffold_5G00360470 |
| rosa_rugosa | Rorug04G0143200 |
| rosa_samantha | Rh4BG203100 Rh4CG216500 |
| rosa_wichuraiana | Rw4G017400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1580, 1761 |
| Acc36I | ACCTGC | 2 cut(s) | 558, 1801 |
| AciI | CCGC | 2 cut(s) | 2005, 2182 |
| AclWI | GGATC | 3 cut(s) | 628, 733, 1044 |
| AcoI | YGGCCR | 4 cut(s) | 853, 1491, 1671, 2045 |
| AcsI | RAATTY | 3 cut(s) | 1211, 2128, 2556 |
| AcuI | CTGAAG | 3 cut(s) | 77, 1461, 2352 |
| AcvI | CACGTG | 1 cut(s) | 859 |
| AfaI | GTAC | 1 cut(s) | 975 |
| AfeI | AGCGCT | 1 cut(s) | 848 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 461, 586, 692, 719, 752, 1674, 2150, 2201, 2242 |
| AflIII | ACRYGT | 2 cut(s) | 138, 960 |
| AgsI | TTSAA | 6 cut(s) | 151, 354, 1208, 1378, 1913, 2322 |
| AjnI | CCWGG | 7 cut(s) | 382, 454, 488, 897, 1668, 1673, 2200 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 125, 157 |
| Alw21I | GWGCWC | 1 cut(s) | 2004 |
| Alw26I | GTCTC | 3 cut(s) | 1297, 2222, 2575 |
| AlwI | GGATC | 3 cut(s) | 628, 733, 1044 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1545, 2207 |
| Aor51HI | AGCGCT | 1 cut(s) | 848 |
| ApaI | GGGCCC | 1 cut(s) | 2481 |
| ApeKI | GCWGC | 7 cut(s) | 214, 913, 1486, 1505, 1836, 2120, 2387 |
| ApoI | RAATTY | 3 cut(s) | 1211, 2128, 2556 |
| AseI | ATTAAT | 1 cut(s) | 1289 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1068 |
| AspLEI | GCGC | 1 cut(s) | 849 |
| AspS9I | GGNCC | 5 cut(s) | 695, 1013, 1828, 2477, 2478 |
| AsuC2I | CCSGG | 1 cut(s) | 1646 |
| AsuHPI | GGTGA | 8 cut(s) | 100, 337, 401, 1604, 1768, 2033, 2387, 2536 |
| AvaII | GGWCC | 2 cut(s) | 695, 1828 |
| BaeGI | GKGCMC | 1 cut(s) | 2481 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 719, 752 |
| BalI | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| BanII | GRGCYC | 2 cut(s) | 2004, 2481 |
| BbrPI | CACGTG | 1 cut(s) | 859 |
| BbsI | GAAGAC | 2 cut(s) | 1711, 1718 |
| Bbv12I | GWGCWC | 1 cut(s) | 2004 |
| BbvI | GCAGC | 7 cut(s) | 226, 900, 1492, 1498, 1848, 2107, 2399 |
| BccI | CCATC | 9 cut(s) | 34, 414, 562, 1073, 1361, 1457, 1880, 2366, 2454 |
| BciT130I | CCWGG | 7 cut(s) | 384, 456, 490, 899, 1670, 1675, 2202 |
| BciVI | GTATCC | 2 cut(s) | 37, 747 |
| BclI | TGATCA | 1 cut(s) | 396 |
| BcnI | CCSGG | 1 cut(s) | 1646 |
| BcoDI | GTCTC | 3 cut(s) | 1297, 2222, 2575 |
| BfaI | CTAG | 5 cut(s) | 821, 1232, 2061, 2384, 2529 |
| BfmI | CTRYAG | 2 cut(s) | 243, 327 |
| BfoI | RGCGCY | 1 cut(s) | 850 |
| BfuAI | ACCTGC | 2 cut(s) | 558, 1801 |
| BfuI | GTATCC | 2 cut(s) | 37, 747 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1845 |
| BglII | AGATCT | 1 cut(s) | 926 |
| BisI | GCNGC | 8 cut(s) | 215, 914, 1487, 1506, 1837, 2121, 2182, 2388 |
| BlsI | GCNGC | 8 cut(s) | 216, 915, 1488, 1507, 1838, 2122, 2183, 2389 |
| Bme1390I | CCNGG | 8 cut(s) | 384, 456, 490, 899, 1646, 1670, 1675, 2202 |
| Bme18I | GGWCC | 2 cut(s) | 695, 1828 |
| BmgT120I | GGNCC | 5 cut(s) | 695, 1013, 1828, 2477, 2478 |
| BmiI | GGNNCC | 3 cut(s) | 696, 1830, 2479 |
| BmrFI | CCNGG | 8 cut(s) | 384, 456, 490, 899, 1646, 1670, 1675, 2202 |
| BmrI | ACTGGG | 2 cut(s) | 370, 1777 |
| BmsI | GCATC | 7 cut(s) | 173, 1005, 1273, 1432, 1476, 2043, 2478 |
| BmuI | ACTGGG | 2 cut(s) | 370, 1777 |
| BoxI | GACNNNNGTC | 1 cut(s) | 693 |
| BpiI | GAAGAC | 2 cut(s) | 1711, 1718 |
| BpmI | CTGGAG | 3 cut(s) | 1437, 1716, 1967 |
| Bpu10I | CCTNAGC | 3 cut(s) | 237, 567, 2196 |
| BpuEI | CTTGAG | 6 cut(s) | 413, 1079, 1727, 1790, 2246, 2378 |
| BpuMI | CCSGG | 1 cut(s) | 1646 |
| Bsa29I | ATCGAT | 1 cut(s) | 948 |
| BsaAI | YACGTR | 1 cut(s) | 859 |
| BsaJI | CCNNGG | 9 cut(s) | 383, 489, 610, 897, 1046, 1668, 1737, 2017, 2039 |
| BsaWI | WCCGGW | 1 cut(s) | 2546 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 461, 586, 692, 719, 752, 1674, 2150, 2201, 2242 |
| Bse1I | ACTGG | 4 cut(s) | 365, 766, 1550, 1772 |
| Bse3DI | GCAATG | 2 cut(s) | 73, 2014 |
| BseBI | CCWGG | 7 cut(s) | 384, 456, 490, 899, 1670, 1675, 2202 |
| BseCI | ATCGAT | 1 cut(s) | 948 |
| BseDI | CCNNGG | 9 cut(s) | 383, 489, 610, 897, 1046, 1668, 1737, 2017, 2039 |
| BseGI | GGATG | 9 cut(s) | 40, 317, 370, 976, 1153, 1408, 2038, 2264, 2458 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 461, 586, 692, 719, 752, 1674, 2150, 2201, 2242 |
| BseMI | GCAATG | 2 cut(s) | 73, 2014 |
| BseMII | CTCAG | 9 cut(s) | 228, 558, 590, 786, 1072, 1089, 1292, 2187, 2532 |
| BseNI | ACTGG | 4 cut(s) | 365, 766, 1550, 1772 |
| BseSI | GKGCMC | 1 cut(s) | 2481 |
| BseXI | GCAGC | 7 cut(s) | 226, 900, 1492, 1498, 1848, 2107, 2399 |
| BseYI | CCCAGC | 3 cut(s) | 1723, 2268, 2510 |
| BsgI | GTGCAG | 1 cut(s) | 486 |
| Bsh1285I | CGRYCG | 1 cut(s) | 466 |
| BshVI | ATCGAT | 1 cut(s) | 948 |
| BsiEI | CGRYCG | 1 cut(s) | 466 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2004 |
| BsiSI | CCGG | 2 cut(s) | 1645, 2547 |
| BslFI | GGGAC | 4 cut(s) | 656, 1028, 1384, 1661 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 461, 586, 692, 719, 752, 1674, 2150, 2201, 2242 |
| BsmAI | GTCTC | 3 cut(s) | 1297, 2222, 2575 |
| BsmBI | CGTCTC | 1 cut(s) | 1297 |
| BsmFI | GGGAC | 4 cut(s) | 656, 1028, 1384, 1661 |
| Bsp120I | GGGCCC | 1 cut(s) | 2477 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2004, 2481 |
| Bsp143I | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| Bsp19I | CCATGG | 3 cut(s) | 1737, 2017, 2039 |
| BspACI | CCGC | 2 cut(s) | 2005, 2182 |
| BspCNI | CTCAG | 9 cut(s) | 229, 559, 591, 787, 1071, 1088, 1293, 2188, 2531 |
| BspDI | ATCGAT | 1 cut(s) | 948 |
| BspHI | TCATGA | 1 cut(s) | 1279 |
| BspLI | GGNNCC | 3 cut(s) | 696, 1830, 2479 |
| BspMAI | CTGCAG | 2 cut(s) | 247, 331 |
| BspMI | ACCTGC | 2 cut(s) | 558, 1801 |
| BspPI | GGATC | 3 cut(s) | 628, 733, 1044 |
| BspQI | GCTCTTC | 3 cut(s) | 56, 588, 1992 |
| BsrDI | GCAATG | 2 cut(s) | 73, 2014 |
| BsrI | ACTGG | 4 cut(s) | 365, 766, 1550, 1772 |
| BssECI | CCNNGG | 9 cut(s) | 383, 489, 610, 897, 1046, 1668, 1737, 2017, 2039 |
| BssMI | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| BssT1I | CCWWGG | 4 cut(s) | 1046, 1737, 2017, 2039 |
| Bst2UI | CCWGG | 7 cut(s) | 384, 456, 490, 899, 1670, 1675, 2202 |
| Bst4CI | ACNGT | 9 cut(s) | 25, 49, 118, 203, 349, 464, 1599, 1717, 2567 |
| Bst6I | CTCTTC | 6 cut(s) | 56, 588, 745, 1146, 1992, 2286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1793 |
| BstBAI | YACGTR | 1 cut(s) | 859 |
| BstDSI | CCRYGG | 4 cut(s) | 610, 1737, 2017, 2039 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2199 |
| BstF5I | GGATG | 9 cut(s) | 40, 317, 370, 976, 1153, 1408, 2038, 2264, 2458 |
| BstH2I | RGCGCY | 1 cut(s) | 850 |
| BstHHI | GCGC | 1 cut(s) | 849 |
| BstKTI | GATC | 8 cut(s) | 178, 399, 623, 728, 929, 982, 1039, 1276 |
| BstMAI | GTCTC | 3 cut(s) | 1297, 2222, 2575 |
| BstMBI | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| BstMCI | CGRYCG | 1 cut(s) | 466 |
| BstNI | CCWGG | 7 cut(s) | 384, 456, 490, 899, 1670, 1675, 2202 |
| BstNSI | RCATGY | 1 cut(s) | 2120 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 693 |
| BstSCI | CCNGG | 8 cut(s) | 382, 454, 488, 897, 1644, 1668, 1673, 2200 |
| BstSFI | CTRYAG | 2 cut(s) | 243, 327 |
| BstSLI | GKGCMC | 1 cut(s) | 2481 |
| BstV1I | GCAGC | 7 cut(s) | 226, 900, 1492, 1498, 1848, 2107, 2399 |
| BstV2I | GAAGAC | 2 cut(s) | 1711, 1718 |
| BstX2I | RGATCY | 1 cut(s) | 926 |
| BstYI | RGATCY | 1 cut(s) | 926 |
| Bsu15I | ATCGAT | 1 cut(s) | 948 |
| BsuI | GTATCC | 2 cut(s) | 37, 747 |
| BsuTUI | ATCGAT | 1 cut(s) | 948 |
| BtgI | CCRYGG | 4 cut(s) | 610, 1737, 2017, 2039 |
| BtgZI | GCGATG | 1 cut(s) | 150 |
| BtsCI | GGATG | 9 cut(s) | 40, 317, 370, 976, 1153, 1408, 2038, 2264, 2458 |
| BtsI | GCAGTG | 2 cut(s) | 2144, 2205 |
| BtsIMutI | CAGTG | 7 cut(s) | 123, 229, 1543, 1923, 2144, 2205, 2572 |
| BveI | ACCTGC | 2 cut(s) | 558, 1801 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1545, 2207 |
| CciI | TCATGA | 1 cut(s) | 1279 |
| CfoI | GCGC | 1 cut(s) | 849 |
| Cfr13I | GGNCC | 5 cut(s) | 695, 1013, 1828, 2477, 2478 |
| ClaI | ATCGAT | 1 cut(s) | 948 |
| Csp6I | GTAC | 1 cut(s) | 974 |
| CviQI | GTAC | 1 cut(s) | 974 |
| DpnI | GATC | 8 cut(s) | 177, 398, 622, 727, 928, 981, 1038, 1275 |
| DpnII | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| EaeI | YGGCCR | 4 cut(s) | 853, 1491, 1671, 2045 |
| Eam1104I | CTCTTC | 6 cut(s) | 56, 588, 745, 1146, 1992, 2286 |
| EarI | CTCTTC | 6 cut(s) | 56, 588, 745, 1146, 1992, 2286 |
| Ecl136II | GAGCTC | 1 cut(s) | 2002 |
| Eco130I | CCWWGG | 4 cut(s) | 1046, 1737, 2017, 2039 |
| Eco147I | AGGCCT | 1 cut(s) | 545 |
| Eco24I | GRGCYC | 2 cut(s) | 2004, 2481 |
| Eco47I | GGWCC | 2 cut(s) | 695, 1828 |
| Eco47III | AGCGCT | 1 cut(s) | 848 |
| Eco53kI | GAGCTC | 1 cut(s) | 2002 |
| Eco57I | CTGAAG | 3 cut(s) | 77, 1461, 2352 |
| Eco72I | CACGTG | 1 cut(s) | 859 |
| EcoICRI | GAGCTC | 1 cut(s) | 2002 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2199 |
| EcoRI | GAATTC | 1 cut(s) | 2556 |
| EcoRII | CCWGG | 7 cut(s) | 382, 454, 488, 897, 1668, 1673, 2200 |
| EcoT14I | CCWWGG | 4 cut(s) | 1046, 1737, 2017, 2039 |
| EcoT22I | ATGCAT | 1 cut(s) | 1288 |
| EcoT38I | GRGCYC | 2 cut(s) | 2004, 2481 |
| ErhI | CCWWGG | 4 cut(s) | 1046, 1737, 2017, 2039 |
| Esp3I | CGTCTC | 1 cut(s) | 1297 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1703, 1735 |
| FaqI | GGGAC | 4 cut(s) | 656, 1028, 1384, 1661 |
| FauNDI | CATATG | 2 cut(s) | 883, 2096 |
| FbaI | TGATCA | 1 cut(s) | 396 |
| Fnu4HI | GCNGC | 8 cut(s) | 215, 914, 1487, 1506, 1837, 2121, 2182, 2388 |
| FokI | GGATG | 9 cut(s) | 47, 304, 377, 983, 1160, 1395, 2045, 2251, 2465 |
| FriOI | GRGCYC | 2 cut(s) | 2004, 2481 |
| Fsp4HI | GCNGC | 8 cut(s) | 215, 914, 1487, 1506, 1837, 2121, 2182, 2388 |
| FspBI | CTAG | 5 cut(s) | 821, 1232, 2061, 2384, 2529 |
| GlaI | GCGC | 1 cut(s) | 848 |
| GluI | GCNGC | 8 cut(s) | 215, 914, 1487, 1506, 1837, 2121, 2182, 2388 |
| GsaI | CCCAGC | 3 cut(s) | 1727, 2272, 2514 |
| GsuI | CTGGAG | 3 cut(s) | 1437, 1716, 1967 |
| HaeII | RGCGCY | 1 cut(s) | 850 |
| HapII | CCGG | 2 cut(s) | 1645, 2547 |
| HhaI | GCGC | 1 cut(s) | 849 |
| Hin6I | GCGC | 1 cut(s) | 847 |
| HinP1I | GCGC | 1 cut(s) | 847 |
| HincII | GTYRAC | 2 cut(s) | 1183, 1192 |
| HindII | GTYRAC | 2 cut(s) | 1183, 1192 |
| HindIII | AAGCTT | 2 cut(s) | 1497, 1625 |
| HpaI | GTTAAC | 2 cut(s) | 1183, 1192 |
| HpaII | CCGG | 2 cut(s) | 1645, 2547 |
| HphI | GGTGA | 8 cut(s) | 100, 337, 401, 1604, 1768, 2033, 2387, 2536 |
| Hpy166II | GTNNAC | 5 cut(s) | 496, 1183, 1192, 2364, 2540 |
| Hpy8I | GTNNAC | 5 cut(s) | 496, 1183, 1192, 2364, 2540 |
| HpyAV | CCTTC | 8 cut(s) | 79, 154, 983, 1214, 1412, 2006, 2023, 2257 |
| HpyCH4III | ACNGT | 9 cut(s) | 25, 49, 118, 203, 349, 464, 1599, 1717, 2567 |
| HpyCH4IV | ACGT | 4 cut(s) | 138, 858, 962, 1959 |
| HpySE526I | ACGT | 4 cut(s) | 138, 858, 962, 1959 |
| HspAI | GCGC | 1 cut(s) | 847 |
| Ksp22I | TGATCA | 1 cut(s) | 396 |
| KspAI | GTTAAC | 2 cut(s) | 1183, 1192 |
| Kzo9I | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| LguI | GCTCTTC | 3 cut(s) | 56, 588, 1992 |
| LmnI | GCTCC | 4 cut(s) | 1051, 1420, 2007, 2277 |
| Lsp1109I | GCAGC | 7 cut(s) | 226, 900, 1492, 1498, 1848, 2107, 2399 |
| LweI | GCATC | 7 cut(s) | 173, 1005, 1273, 1432, 1476, 2043, 2478 |
| MaeI | CTAG | 5 cut(s) | 821, 1232, 2061, 2384, 2529 |
| MaeII | ACGT | 4 cut(s) | 138, 858, 962, 1959 |
| MaeIII | GTNAC | 4 cut(s) | 509, 573, 1921, 2021 |
| MalI | GATC | 8 cut(s) | 177, 398, 622, 727, 928, 981, 1038, 1275 |
| MboI | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| MfeI | CAATTG | 2 cut(s) | 354, 1389 |
| MflI | RGATCY | 1 cut(s) | 926 |
| MhlI | GDGCHC | 2 cut(s) | 2004, 2481 |
| MlsI | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| MluNI | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| MlyI | GAGTC | 5 cut(s) | 377, 477, 657, 691, 2535 |
| MmeI | TCCRAC | 3 cut(s) | 123, 561, 1973 |
| Mox20I | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| Mph1103I | ATGCAT | 1 cut(s) | 1288 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1068 |
| MscI | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| MseI | TTAA | 7 cut(s) | 1031, 1119, 1182, 1191, 1289, 1397, 1550 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1281, 1428, 1742 |
| Msp20I | TGGCCA | 4 cut(s) | 855, 1493, 1673, 2047 |
| MspA1I | CMGCKG | 1 cut(s) | 1489 |
| MspI | CCGG | 2 cut(s) | 1645, 2547 |
| MspR9I | CCNGG | 8 cut(s) | 384, 456, 490, 899, 1646, 1670, 1675, 2202 |
| MunI | CAATTG | 2 cut(s) | 354, 1389 |
| MvaI | CCWGG | 7 cut(s) | 384, 456, 490, 899, 1670, 1675, 2202 |
| NciI | CCSGG | 1 cut(s) | 1646 |
| NcoI | CCATGG | 3 cut(s) | 1737, 2017, 2039 |
| NdeI | CATATG | 2 cut(s) | 883, 2096 |
| NdeII | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| NlaIV | GGNNCC | 3 cut(s) | 696, 1830, 2479 |
| NmuCI | GTSAC | 2 cut(s) | 1921, 2021 |
| NsiI | ATGCAT | 1 cut(s) | 1288 |
| NspI | RCATGY | 1 cut(s) | 2120 |
| PaeI | GCATGC | 1 cut(s) | 2120 |
| PagI | TCATGA | 1 cut(s) | 1279 |
| PceI | AGGCCT | 1 cut(s) | 545 |
| PciSI | GCTCTTC | 3 cut(s) | 56, 588, 1992 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1068 |
| PfeI | GAWTC | 5 cut(s) | 180, 1517, 1973, 2187, 2400 |
| PflFI | GACNNNGTC | 1 cut(s) | 647 |
| PfoI | TCCNGGA | 2 cut(s) | 454, 1644 |
| PkrI | GCNGC | 8 cut(s) | 216, 915, 1488, 1507, 1838, 2122, 2183, 2389 |
| PleI | GAGTC | 5 cut(s) | 376, 476, 656, 690, 2535 |
| PmaCI | CACGTG | 1 cut(s) | 859 |
| PmlI | CACGTG | 1 cut(s) | 859 |
| PpsI | GAGTC | 5 cut(s) | 376, 476, 656, 690, 2535 |
| Ppu21I | YACGTR | 1 cut(s) | 859 |
| PshAI | GACNNNNGTC | 1 cut(s) | 693 |
| PshBI | ATTAAT | 1 cut(s) | 1289 |
| PsiI | TTATAA | 2 cut(s) | 1580, 1761 |
| Psp124BI | GAGCTC | 1 cut(s) | 2004 |
| Psp6I | CCWGG | 7 cut(s) | 382, 454, 488, 897, 1668, 1673, 2200 |
| PspCI | CACGTG | 1 cut(s) | 859 |
| PspFI | CCCAGC | 3 cut(s) | 1723, 2268, 2510 |
| PspGI | CCWGG | 7 cut(s) | 382, 454, 488, 897, 1668, 1673, 2200 |
| PspN4I | GGNNCC | 3 cut(s) | 696, 1830, 2479 |
| PspOMI | GGGCCC | 1 cut(s) | 2477 |
| PspPI | GGNCC | 5 cut(s) | 695, 1013, 1828, 2477, 2478 |
| PstI | CTGCAG | 2 cut(s) | 247, 331 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1545, 2207 |
| PsuI | RGATCY | 1 cut(s) | 926 |
| PsyI | GACNNNGTC | 1 cut(s) | 647 |
| PvuII | CAGCTG | 1 cut(s) | 1489 |
| RsaI | GTAC | 1 cut(s) | 975 |
| RsaNI | GTAC | 1 cut(s) | 974 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1281, 1428, 1742 |
| SacI | GAGCTC | 1 cut(s) | 2004 |
| SapI | GCTCTTC | 3 cut(s) | 56, 588, 1992 |
| SaqAI | TTAA | 7 cut(s) | 1031, 1119, 1182, 1191, 1289, 1397, 1550 |
| SatI | GCNGC | 8 cut(s) | 215, 914, 1487, 1506, 1837, 2121, 2182, 2388 |
| Sau3AI | GATC | 8 cut(s) | 175, 396, 620, 725, 926, 979, 1036, 1273 |
| Sau96I | GGNCC | 5 cut(s) | 695, 1013, 1828, 2477, 2478 |
| SchI | GAGTC | 5 cut(s) | 377, 477, 657, 691, 2535 |
| ScrFI | CCNGG | 8 cut(s) | 384, 456, 490, 899, 1646, 1670, 1675, 2202 |
| SduI | GDGCHC | 2 cut(s) | 2004, 2481 |
| SfaNI | GCATC | 7 cut(s) | 173, 1005, 1273, 1432, 1476, 2043, 2478 |
| SfcI | CTRYAG | 2 cut(s) | 243, 327 |
| SinI | GGWCC | 2 cut(s) | 695, 1828 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1281, 1428, 1742 |
| SmlI | CTYRAG | 7 cut(s) | 13, 428, 1094, 1706, 1805, 2225, 2357 |
| SmoI | CTYRAG | 7 cut(s) | 13, 428, 1094, 1706, 1805, 2225, 2357 |
| SphI | GCATGC | 1 cut(s) | 2120 |
| SseBI | AGGCCT | 1 cut(s) | 545 |
| SsiI | CCGC | 2 cut(s) | 2005, 2182 |
| SspI | AATATT | 1 cut(s) | 1931 |
| SspMI | CTAG | 5 cut(s) | 821, 1232, 2061, 2384, 2529 |
| SstI | GAGCTC | 1 cut(s) | 2004 |
| StuI | AGGCCT | 1 cut(s) | 545 |
| StyD4I | CCNGG | 8 cut(s) | 382, 454, 488, 897, 1644, 1668, 1673, 2200 |
| StyI | CCWWGG | 4 cut(s) | 1046, 1737, 2017, 2039 |
| TaaI | ACNGT | 9 cut(s) | 25, 49, 118, 203, 349, 464, 1599, 1717, 2567 |
| TaiI | ACGT | 4 cut(s) | 141, 861, 965, 1962 |
| TaqI | TCGA | 6 cut(s) | 178, 263, 466, 766, 948, 1470 |
| TatI | WGTACW | 1 cut(s) | 973 |
| TauI | GCSGC | 1 cut(s) | 2184 |
| TfiI | GAWTC | 5 cut(s) | 180, 1517, 1973, 2187, 2400 |
| Tru1I | TTAA | 7 cut(s) | 1031, 1119, 1182, 1191, 1289, 1397, 1550 |
| Tru9I | TTAA | 7 cut(s) | 1031, 1119, 1182, 1191, 1289, 1397, 1550 |
| TscAI | CASTG | 7 cut(s) | 123, 229, 1550, 1930, 2144, 2212, 2572 |
| TseFI | GTSAC | 2 cut(s) | 1921, 2021 |
| TseI | GCWGC | 7 cut(s) | 214, 913, 1486, 1505, 1836, 2120, 2387 |
| Tsp45I | GTSAC | 2 cut(s) | 1921, 2021 |
| TspGWI | ACGGA | 2 cut(s) | 599, 1160 |
| TspRI | CASTG | 7 cut(s) | 123, 229, 1550, 1930, 2144, 2212, 2572 |
| Tth111I | GACNNNGTC | 1 cut(s) | 647 |
| VpaK11BI | GGWCC | 2 cut(s) | 695, 1828 |
| VspI | ATTAAT | 1 cut(s) | 1289 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2199 |
| XapI | RAATTY | 3 cut(s) | 1211, 2128, 2556 |
| XbaI | TCTAGA | 2 cut(s) | 820, 2528 |
| XceI | RCATGY | 1 cut(s) | 2120 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2282 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1068 |
| XspI | CTAG | 5 cut(s) | 821, 1232, 2061, 2384, 2529 |
| Zsp2I | ATGCAT | 1 cut(s) | 1288 |