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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28420 |
| fragaria_vesca | FvH4_6g49720 |
| prunus_persica | Prupe.3G275600_v2.0.a1 |
| pyrus_communis | pycom17g03880 |
| rosa_chinensis | RchiOBHm_Chr2g0169751 |
| rosa_laevigata | RLG00000021899 |
| rosa_multiflora | Rmu_ssc0000389.1_g000030 |
| rosa_roxburghii | Rroxscaffold_2G00081820 |
| rosa_rugosa | Rorug02G0542700.1 |
| rosa_samantha | Rh2AG614900 Rh2BG627200 Rh2CG596600 Rh2DG638000 |
| rosa_wichuraiana | Rw2G050980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 398, 467 |
| AfaI | GTAC | 1 cut(s) | 46 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 200 |
| AflIII | ACRYGT | 1 cut(s) | 39 |
| AgsI | TTSAA | 4 cut(s) | 78, 220, 502, 515 |
| AjnI | CCWGG | 1 cut(s) | 475 |
| AluBI | AGCT | 1 cut(s) | 618 |
| AluI | AGCT | 1 cut(s) | 618 |
| Alw26I | GTCTC | 5 cut(s) | 9, 371, 553, 564, 589 |
| Ama87I | CYCGRG | 1 cut(s) | 200 |
| ApoI | RAATTY | 2 cut(s) | 398, 467 |
| AvaI | CYCGRG | 1 cut(s) | 200 |
| BbsI | GAAGAC | 1 cut(s) | 290 |
| BceAI | ACGGC | 1 cut(s) | 155 |
| BciT130I | CCWGG | 1 cut(s) | 477 |
| BclI | TGATCA | 2 cut(s) | 351, 583 |
| BcoDI | GTCTC | 5 cut(s) | 9, 371, 553, 564, 589 |
| BfaI | CTAG | 1 cut(s) | 551 |
| BfmI | CTRYAG | 1 cut(s) | 60 |
| Bme1390I | CCNGG | 1 cut(s) | 477 |
| BmeT110I | CYCGRG | 1 cut(s) | 200 |
| BmiI | GGNNCC | 1 cut(s) | 303 |
| BmrFI | CCNGG | 1 cut(s) | 477 |
| BmsI | GCATC | 2 cut(s) | 240, 544 |
| BpiI | GAAGAC | 1 cut(s) | 290 |
| BsaI | GGTCTC | 1 cut(s) | 589 |
| BsaJI | CCNNGG | 3 cut(s) | 199, 319, 476 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 200 |
| Bse118I | RCCGGY | 1 cut(s) | 304 |
| Bse3DI | GCAATG | 1 cut(s) | 131 |
| BseBI | CCWGG | 1 cut(s) | 477 |
| BseDI | CCNNGG | 3 cut(s) | 199, 319, 476 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BseMI | GCAATG | 1 cut(s) | 131 |
| BseRI | GAGGAG | 4 cut(s) | 220, 246, 389, 509 |
| BsiHKCI | CYCGRG | 1 cut(s) | 200 |
| BsiSI | CCGG | 1 cut(s) | 305 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BsmAI | GTCTC | 5 cut(s) | 9, 371, 553, 564, 589 |
| BsmBI | CGTCTC | 2 cut(s) | 371, 553 |
| Bso31I | GGTCTC | 1 cut(s) | 589 |
| BsoBI | CYCGRG | 1 cut(s) | 200 |
| Bsp143I | GATC | 3 cut(s) | 117, 351, 583 |
| BspHI | TCATGA | 1 cut(s) | 211 |
| BspLI | GGNNCC | 1 cut(s) | 303 |
| BspMAI | CTGCAG | 1 cut(s) | 64 |
| BspTNI | GGTCTC | 1 cut(s) | 589 |
| BsrDI | GCAATG | 1 cut(s) | 131 |
| BsrFI | RCCGGY | 1 cut(s) | 304 |
| BssAI | RCCGGY | 1 cut(s) | 304 |
| BssECI | CCNNGG | 3 cut(s) | 199, 319, 476 |
| BssMI | GATC | 3 cut(s) | 117, 351, 583 |
| BssT1I | CCWWGG | 1 cut(s) | 319 |
| Bst2UI | CCWGG | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 2 cut(s) | 412, 614 |
| Bst6I | CTCTTC | 3 cut(s) | 5, 27, 106 |
| BstDEI | CTNAG | 1 cut(s) | 166 |
| BstKTI | GATC | 3 cut(s) | 120, 354, 586 |
| BstMAI | GTCTC | 5 cut(s) | 9, 371, 553, 564, 589 |
| BstMBI | GATC | 3 cut(s) | 117, 351, 583 |
| BstNI | CCWGG | 1 cut(s) | 477 |
| BstNSI | RCATGY | 1 cut(s) | 43 |
| BstSCI | CCNGG | 1 cut(s) | 475 |
| BstSFI | CTRYAG | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 290 |
| CciI | TCATGA | 1 cut(s) | 211 |
| Cfr10I | RCCGGY | 1 cut(s) | 304 |
| Csp6I | GTAC | 1 cut(s) | 45 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 276, 311 |
| CviAII | CATG | 2 cut(s) | 40, 212 |
| CviJI | RGCY | 6 cut(s) | 83, 170, 308, 340, 475, 618 |
| CviKI_1 | RGCY | 6 cut(s) | 83, 170, 308, 340, 475, 618 |
| CviQI | GTAC | 1 cut(s) | 45 |
| DdeI | CTNAG | 1 cut(s) | 166 |
| DpnI | GATC | 3 cut(s) | 119, 353, 585 |
| DpnII | GATC | 3 cut(s) | 117, 351, 583 |
| Eam1104I | CTCTTC | 3 cut(s) | 5, 27, 106 |
| EarI | CTCTTC | 3 cut(s) | 5, 27, 106 |
| Eco130I | CCWWGG | 1 cut(s) | 319 |
| Eco31I | GGTCTC | 1 cut(s) | 589 |
| Eco88I | CYCGRG | 1 cut(s) | 200 |
| EcoRII | CCWGG | 1 cut(s) | 475 |
| EcoT14I | CCWWGG | 1 cut(s) | 319 |
| ErhI | CCWWGG | 1 cut(s) | 319 |
| Esp3I | CGTCTC | 2 cut(s) | 371, 553 |
| FaeI | CATG | 2 cut(s) | 43, 215 |
| FaiI | YATR | 4 cut(s) | 41, 149, 213, 450 |
| FatI | CATG | 2 cut(s) | 39, 211 |
| FbaI | TGATCA | 2 cut(s) | 351, 583 |
| FspBI | CTAG | 1 cut(s) | 551 |
| HapII | CCGG | 1 cut(s) | 305 |
| Hin1II | CATG | 2 cut(s) | 43, 215 |
| HincII | GTYRAC | 1 cut(s) | 57 |
| HindII | GTYRAC | 1 cut(s) | 57 |
| HinfI | GANTC | 4 cut(s) | 187, 208, 223, 605 |
| HpaII | CCGG | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 3 cut(s) | 45, 57, 175 |
| Hpy188I | TCNGA | 2 cut(s) | 588, 610 |
| Hpy188III | TCNNGA | 6 cut(s) | 202, 212, 220, 355, 526, 629 |
| Hpy8I | GTNNAC | 3 cut(s) | 45, 57, 175 |
| Hpy99I | CGWCG | 3 cut(s) | 161, 231, 532 |
| HpyCH4III | ACNGT | 2 cut(s) | 412, 614 |
| HpyCH4IV | ACGT | 2 cut(s) | 156, 530 |
| HpyCH4V | TGCA | 1 cut(s) | 62 |
| HpyF3I | CTNAG | 1 cut(s) | 166 |
| HpySE526I | ACGT | 2 cut(s) | 156, 530 |
| Hsp92II | CATG | 2 cut(s) | 43, 215 |
| Ksp22I | TGATCA | 2 cut(s) | 351, 583 |
| Kzo9I | GATC | 3 cut(s) | 117, 351, 583 |
| LpnPI | CCDG | 3 cut(s) | 318, 462, 489 |
| LweI | GCATC | 2 cut(s) | 240, 544 |
| MaeI | CTAG | 1 cut(s) | 551 |
| MaeII | ACGT | 2 cut(s) | 156, 530 |
| MaeIII | GTNAC | 1 cut(s) | 634 |
| MalI | GATC | 3 cut(s) | 119, 353, 585 |
| MboI | GATC | 3 cut(s) | 117, 351, 583 |
| MboII | GAAGA | 9 cut(s) | 22, 44, 93, 289, 292, 295, 470, 473, 601 |
| MluCI | AATT | 2 cut(s) | 398, 467 |
| MlyI | GAGTC | 4 cut(s) | 181, 217, 217, 599 |
| MseI | TTAA | 3 cut(s) | 90, 273, 649 |
| MslI | CAYNNNNRTG | 1 cut(s) | 23 |
| MspI | CCGG | 1 cut(s) | 305 |
| MspR9I | CCNGG | 1 cut(s) | 477 |
| MvaI | CCWGG | 1 cut(s) | 477 |
| NdeII | GATC | 3 cut(s) | 117, 351, 583 |
| NlaIII | CATG | 2 cut(s) | 43, 215 |
| NlaIV | GGNNCC | 1 cut(s) | 303 |
| NmuCI | GTSAC | 1 cut(s) | 634 |
| NspI | RCATGY | 1 cut(s) | 43 |
| PagI | TCATGA | 1 cut(s) | 211 |
| PciI | ACATGT | 1 cut(s) | 39 |
| PleI | GAGTC | 4 cut(s) | 181, 216, 217, 599 |
| PpsI | GAGTC | 4 cut(s) | 181, 216, 217, 599 |
| PscI | ACATGT | 1 cut(s) | 39 |
| Psp6I | CCWGG | 1 cut(s) | 475 |
| PspGI | CCWGG | 1 cut(s) | 475 |
| PspN4I | GGNNCC | 1 cut(s) | 303 |
| PstI | CTGCAG | 1 cut(s) | 64 |
| RsaI | GTAC | 1 cut(s) | 46 |
| RsaNI | GTAC | 1 cut(s) | 45 |
| RseI | CAYNNNNRTG | 1 cut(s) | 23 |
| SaqAI | TTAA | 3 cut(s) | 90, 273, 649 |
| Sau3AI | GATC | 3 cut(s) | 117, 351, 583 |
| SchI | GAGTC | 4 cut(s) | 181, 217, 217, 599 |
| ScrFI | CCNGG | 1 cut(s) | 477 |
| SetI | ASST | 9 cut(s) | 159, 185, 201, 238, 325, 485, 533, 568, 620 |
| SfaNI | GCATC | 2 cut(s) | 240, 544 |
| SfcI | CTRYAG | 1 cut(s) | 60 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 23 |
| Sse9I | AATT | 2 cut(s) | 398, 467 |
| SspMI | CTAG | 1 cut(s) | 551 |
| StyD4I | CCNGG | 1 cut(s) | 475 |
| StyI | CCWWGG | 1 cut(s) | 319 |
| TaaI | ACNGT | 2 cut(s) | 412, 614 |
| TaiI | ACGT | 2 cut(s) | 159, 533 |
| TaqI | TCGA | 3 cut(s) | 120, 185, 229 |
| TasI | AATT | 2 cut(s) | 398, 467 |
| TatI | WGTACW | 1 cut(s) | 44 |
| Tru1I | TTAA | 3 cut(s) | 90, 273, 649 |
| Tru9I | TTAA | 3 cut(s) | 90, 273, 649 |
| TseFI | GTSAC | 1 cut(s) | 634 |
| Tsp45I | GTSAC | 1 cut(s) | 634 |
| TspDTI | ATGAA | 4 cut(s) | 23, 39, 480, 511 |
| XapI | RAATTY | 2 cut(s) | 398, 467 |
| XceI | RCATGY | 1 cut(s) | 43 |
| XspI | CTAG | 1 cut(s) | 551 |