Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011495

Physical Location & Seq

Genomic Coordinates Reverse (-)

17637122 .. 17639716

Gene Structure 2595 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G47810.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 573 bp

ATGGTGCTGGTATTGGCATTGGGGGATCTCCATGTACCCCATAGAGCGGCTGATCTACCTCCTAAGTTCAAATCAATGCTTGTTCCTGGGAAGATTCAACACATCATCTGCACTGGAAATCTCTGCATCAAAGAAATCCATGACTACTTGAAGACTATCTGCCCTGATTTGCATATAGTTCGAGGGGAGTTTGACGAAGATGCGCGATACCCTGAGAATAAAACCTTGACTATTGGGCAATTCAAGCTGGGATTGTGTCATGGCCACCAGGTGATCCCATGGGGTGATCTAGACTCACTCGCCATGCTTCAGAGACAACTGGGCGTCGACATTCTCGTAACAGGCCATACCCACCAGTTCACAGCGTACAAACACGAGGGAGGAGTGGTGATAAACCCGGGCTCTGCAACCGGAGCTTACAGCAGCATAAACCAAGACGTTAACCCAAGCTTTGTCCTTATGGACATCGATGGTTTCCGAGCTGTAGTCTATGTCTATGAGCTAATCGATGGAGAAGTTAAAGTCGACAAGATCGAGTTCAAGAAGCCCCCTACTACCAGCTCTGGTCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0001881 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0023051 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042147 GO:0042886 GO:0043112 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044260 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046872 GO:0046907 GO:0046914 GO:0050789 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098791 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Metallophos_2

Protein Analysis

190

Amino Acids

20.97

Weight (kDa)

6.02

Isoelectric Point (pI)

23.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos_2	PF12850	4 - 157	2.7e-24	Calcineurin-like phosphoesterase superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47810 AT3G47810 AT3G47810
fragaria_vesca	FvH4_5g15250
malus_domestica	MD06G1190100.v1.1 MD14G1197000.v1.1
prunus_persica	Prupe.5G189200_v2.0.a1
pyrus_communis	pycom06g16880 pycom14g16370
rosa_chinensis	RchiOBHm_Chr7g0180841
rosa_laevigata	RLG00000005226
rosa_multiflora	Rmu_sc0007457.1_g000004
rosa_roxburghii	Rroxscaffold_3G00272480
rosa_rugosa	Rorug06G0436800 Rorug06G0436900
rosa_samantha	Rh7AG038400 Rh7BG038000 Rh7CG039600 Rh7DG038100
rosa_wichuraiana	Rw7G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	47
AccI	GTMKAC	2 cut(s)	327, 525
AccII	CGCG	1 cut(s)	205
AciI	CCGC	1 cut(s)	47
AclWI	GGATC	2 cut(s)	33, 268
AcoI	YGGCCR	1 cut(s)	262
AcuI	CTGAAG	1 cut(s)	293
AcyI	GRCGYC	1 cut(s)	324
AdeI	CACNNNGTG	1 cut(s)	271
AfaI	GTAC	2 cut(s)	36, 368
AfiI	CCNNNNNNNGG	1 cut(s)	46
AgsI	TTSAA	5 cut(s)	70, 98, 151, 244, 541
AjnI	CCWGG	2 cut(s)	85, 267
AluBI	AGCT	6 cut(s)	247, 416, 450, 482, 502, 561
AluI	AGCT	6 cut(s)	247, 416, 450, 482, 502, 561
Alw26I	GTCTC	1 cut(s)	307
AlwI	GGATC	2 cut(s)	33, 268
Ama87I	CYCGRG	1 cut(s)	397
AoxI	GGCC	2 cut(s)	262, 343
ApeKI	GCWGC	1 cut(s)	423
AspLEI	GCGC	1 cut(s)	205
AspS9I	GGNCC	1 cut(s)	566
AsuC2I	CCSGG	2 cut(s)	398, 399
AsuHPI	GGTGA	3 cut(s)	283, 296, 400
AvaI	CYCGRG	1 cut(s)	397
AvaII	GGWCC	1 cut(s)	566
BalI	TGGCCA	1 cut(s)	264
BanII	GRGCYC	1 cut(s)	404
BauI	CACGAG	1 cut(s)	374
BbsI	GAAGAC	1 cut(s)	158
BbvI	GCAGC	1 cut(s)	435
BccI	CCATC	2 cut(s)	464, 503
BcgI	CGANNNNNNTGC	2 cut(s)	161, 195
BciT130I	CCWGG	2 cut(s)	87, 269
BcnI	CCSGG	2 cut(s)	398, 399
BcoDI	GTCTC	1 cut(s)	307
BfaI	CTAG	1 cut(s)	290
BfmI	CTRYAG	1 cut(s)	483
BisI	GCNGC	2 cut(s)	48, 424
BlsI	GCNGC	2 cut(s)	49, 425
Bme1390I	CCNGG	4 cut(s)	87, 269, 398, 399
Bme18I	GGWCC	1 cut(s)	566
BmeT110I	CYCGRG	1 cut(s)	397
BmgT120I	GGNCC	1 cut(s)	566
BmrFI	CCNGG	4 cut(s)	87, 269, 398, 399
BmrI	ACTGGG	1 cut(s)	329
BmsI	GCATC	2 cut(s)	135, 190
BmuI	ACTGGG	1 cut(s)	329
BpiI	GAAGAC	1 cut(s)	158
BpuMI	CCSGG	2 cut(s)	398, 399
Bsa29I	ATCGAT	2 cut(s)	468, 507
BsaHI	GRCGYC	1 cut(s)	324
BsaJI	CCNNGG	3 cut(s)	86, 278, 397
BsaWI	WCCGGW	1 cut(s)	410
BsaXI	ACNNNNNCTCC	2 cut(s)	372, 402
Bsc4I	CCNNNNNNNGG	1 cut(s)	46
Bse1I	ACTGG	3 cut(s)	118, 324, 355
BseBI	CCWGG	2 cut(s)	87, 269
BseCI	ATCGAT	2 cut(s)	468, 507
BseDI	CCNNGG	3 cut(s)	86, 278, 397
BseLI	CCNNNNNNNGG	1 cut(s)	46
BseMII	CTCAG	1 cut(s)	204
BseNI	ACTGG	3 cut(s)	118, 324, 355
BseRI	GAGGAG	1 cut(s)	396
BseXI	GCAGC	1 cut(s)	435
BseYI	CCCAGC	1 cut(s)	247
BsgI	GTGCAG	1 cut(s)	94
Bsh1236I	CGCG	1 cut(s)	205
BshFI	GGCC	2 cut(s)	264, 345
BshVI	ATCGAT	2 cut(s)	468, 507
BsiHKCI	CYCGRG	1 cut(s)	397
BsiSI	CCGG	2 cut(s)	398, 411
BslI	CCNNNNNNNGG	1 cut(s)	46
BsmAI	GTCTC	1 cut(s)	307
BsnI	GGCC	2 cut(s)	264, 345
BsoBI	CYCGRG	1 cut(s)	397
Bsp1286I	GDGCHC	1 cut(s)	404
Bsp143I	GATC	5 cut(s)	25, 52, 273, 286, 531
Bsp19I	CCATGG	1 cut(s)	278
BspACI	CCGC	1 cut(s)	47
BspANI	GGCC	2 cut(s)	264, 345
BspCNI	CTCAG	1 cut(s)	205
BspDI	ATCGAT	2 cut(s)	468, 507
BspFNI	CGCG	1 cut(s)	205
BspPI	GGATC	2 cut(s)	33, 268
BsrBI	CCGCTC	1 cut(s)	47
BsrI	ACTGG	3 cut(s)	118, 324, 355
BssECI	CCNNGG	3 cut(s)	86, 278, 397
BssMI	GATC	5 cut(s)	25, 52, 273, 286, 531
BssNI	GRCGYC	1 cut(s)	324
BssSI	CACGAG	1 cut(s)	374
BssT1I	CCWWGG	1 cut(s)	278
Bst2BI	CACGAG	1 cut(s)	374
Bst2UI	CCWGG	2 cut(s)	87, 269
BstACI	GRCGYC	1 cut(s)	324
BstDEI	CTNAG	2 cut(s)	63, 213
BstDSI	CCRYGG	1 cut(s)	278
BstFNI	CGCG	1 cut(s)	205
BstHHI	GCGC	1 cut(s)	205
BstKTI	GATC	5 cut(s)	28, 55, 276, 289, 534
BstMAI	GTCTC	1 cut(s)	307
BstMBI	GATC	5 cut(s)	25, 52, 273, 286, 531
BstMWI	GCNNNNNNNGC	2 cut(s)	244, 413
BstNI	CCWGG	2 cut(s)	87, 269
BstSCI	CCNGG	4 cut(s)	85, 267, 396, 397
BstSFI	CTRYAG	1 cut(s)	483
BstUI	CGCG	1 cut(s)	205
BstV1I	GCAGC	1 cut(s)	435
BstV2I	GAAGAC	1 cut(s)	158
BstX2I	RGATCY	1 cut(s)	25
BstYI	RGATCY	1 cut(s)	25
Bsu15I	ATCGAT	2 cut(s)	468, 507
BsuRI	GGCC	2 cut(s)	264, 345
BsuTUI	ATCGAT	2 cut(s)	468, 507
BtgI	CCRYGG	1 cut(s)	278
BtsIMutI	CAGTG	1 cut(s)	111
CfoI	GCGC	1 cut(s)	205
Cfr13I	GGNCC	1 cut(s)	566
Cfr9I	CCCGGG	1 cut(s)	397
ClaI	ATCGAT	2 cut(s)	468, 507
CseI	GACGC	1 cut(s)	313
CsiI	ACCWGGT	1 cut(s)	267
Csp6I	GTAC	2 cut(s)	35, 367
CviAII	CATG	5 cut(s)	32, 140, 260, 279, 304
CviQI	GTAC	2 cut(s)	35, 367
DdeI	CTNAG	2 cut(s)	63, 213
DpnI	GATC	5 cut(s)	27, 54, 275, 288, 533
DpnII	GATC	5 cut(s)	25, 52, 273, 286, 531
DraIII	CACNNNGTG	1 cut(s)	271
EaeI	YGGCCR	1 cut(s)	262
Eco130I	CCWWGG	1 cut(s)	278
Eco24I	GRGCYC	1 cut(s)	404
Eco47I	GGWCC	1 cut(s)	566
Eco57I	CTGAAG	1 cut(s)	293
Eco88I	CYCGRG	1 cut(s)	397
EcoRII	CCWGG	2 cut(s)	85, 267
EcoT14I	CCWWGG	1 cut(s)	278
EcoT38I	GRGCYC	1 cut(s)	404
ErhI	CCWWGG	1 cut(s)	278
FaeI	CATG	5 cut(s)	35, 143, 263, 282, 307
FatI	CATG	5 cut(s)	31, 139, 259, 278, 303
FblI	GTMKAC	2 cut(s)	327, 525
Fnu4HI	GCNGC	2 cut(s)	48, 424
FriOI	GRGCYC	1 cut(s)	404
Fsp4HI	GCNGC	2 cut(s)	48, 424
FspBI	CTAG	1 cut(s)	290
GlaI	GCGC	1 cut(s)	204
GluI	GCNGC	2 cut(s)	48, 424
GsaI	CCCAGC	1 cut(s)	251
HaeIII	GGCC	2 cut(s)	264, 345
HapII	CCGG	2 cut(s)	398, 411
HgaI	GACGC	1 cut(s)	313
HhaI	GCGC	1 cut(s)	205
Hin1I	GRCGYC	1 cut(s)	324
Hin1II	CATG	5 cut(s)	35, 143, 263, 282, 307
Hin6I	GCGC	1 cut(s)	203
HinP1I	GCGC	1 cut(s)	203
HincII	GTYRAC	3 cut(s)	328, 442, 526
HindII	GTYRAC	3 cut(s)	328, 442, 526
HindIII	AAGCTT	1 cut(s)	448
HinfI	GANTC	2 cut(s)	94, 293
HpaI	GTTAAC	1 cut(s)	442
HpaII	CCGG	2 cut(s)	398, 411
HphI	GGTGA	3 cut(s)	283, 296, 400
Hpy166II	GTNNAC	4 cut(s)	328, 360, 442, 526
Hpy188I	TCNGA	2 cut(s)	312, 479
Hpy188III	TCNNGA	2 cut(s)	290, 541
Hpy8I	GTNNAC	4 cut(s)	328, 360, 442, 526
Hpy99I	CGWCG	1 cut(s)	329
HpyCH4IV	ACGT	1 cut(s)	438
HpyCH4V	TGCA	4 cut(s)	111, 126, 172, 407
HpyF10VI	GCNNNNNNNGC	2 cut(s)	244, 413
HpyF3I	CTNAG	2 cut(s)	63, 213
HpySE526I	ACGT	1 cut(s)	438
Hsp92I	GRCGYC	1 cut(s)	324
Hsp92II	CATG	5 cut(s)	35, 143, 263, 282, 307
HspAI	GCGC	1 cut(s)	203
KspAI	GTTAAC	1 cut(s)	442
Kzo9I	GATC	5 cut(s)	25, 52, 273, 286, 531
LmnI	GCTCC	1 cut(s)	413
Lsp1109I	GCAGC	1 cut(s)	435
LweI	GCATC	2 cut(s)	135, 190
MabI	ACCWGGT	1 cut(s)	267
MaeI	CTAG	1 cut(s)	290
MaeII	ACGT	1 cut(s)	438
MaeIII	GTNAC	1 cut(s)	337
MalI	GATC	5 cut(s)	27, 54, 275, 288, 533
MbiI	CCGCTC	1 cut(s)	47
MboI	GATC	5 cut(s)	25, 52, 273, 286, 531
MboII	GAAGA	3 cut(s)	103, 163, 209
MflI	RGATCY	1 cut(s)	25
MhlI	GDGCHC	1 cut(s)	404
MlsI	TGGCCA	1 cut(s)	264
MluCI	AATT	1 cut(s)	239
MluNI	TGGCCA	1 cut(s)	264
MlyI	GAGTC	1 cut(s)	287
MnlI	CCTC	4 cut(s)	69, 176, 370, 374
Mox20I	TGGCCA	1 cut(s)	264
MscI	TGGCCA	1 cut(s)	264
MseI	TTAA	2 cut(s)	441, 519
Msp20I	TGGCCA	1 cut(s)	264
MspI	CCGG	2 cut(s)	398, 411
MspR9I	CCNGG	4 cut(s)	87, 269, 398, 399
MvaI	CCWGG	2 cut(s)	87, 269
MvnI	CGCG	1 cut(s)	205
MwoI	GCNNNNNNNGC	2 cut(s)	244, 413
NciI	CCSGG	2 cut(s)	398, 399
NcoI	CCATGG	1 cut(s)	278
NdeII	GATC	5 cut(s)	25, 52, 273, 286, 531
NlaIII	CATG	5 cut(s)	35, 143, 263, 282, 307
PcsI	WCGNNNNNNNCGW	2 cut(s)	333, 531
PfeI	GAWTC	1 cut(s)	94
PkrI	GCNGC	2 cut(s)	49, 425
PleI	GAGTC	1 cut(s)	287
PpsI	GAGTC	1 cut(s)	287
Psp6I	CCWGG	2 cut(s)	85, 267
PspFI	CCCAGC	1 cut(s)	247
PspGI	CCWGG	2 cut(s)	85, 267
PspPI	GGNCC	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	25
RsaI	GTAC	2 cut(s)	36, 368
RsaNI	GTAC	2 cut(s)	35, 367
SalI	GTCGAC	2 cut(s)	326, 524
SaqAI	TTAA	2 cut(s)	441, 519
SatI	GCNGC	2 cut(s)	48, 424
Sau3AI	GATC	5 cut(s)	25, 52, 273, 286, 531
Sau96I	GGNCC	1 cut(s)	566
SchI	GAGTC	1 cut(s)	287
ScrFI	CCNGG	4 cut(s)	87, 269, 398, 399
SduI	GDGCHC	1 cut(s)	404
SexAI	ACCWGGT	1 cut(s)	267
SfaNI	GCATC	2 cut(s)	135, 190
SfcI	CTRYAG	1 cut(s)	483
SinI	GGWCC	1 cut(s)	566
SmaI	CCCGGG	1 cut(s)	399
Sse9I	AATT	1 cut(s)	239
SsiI	CCGC	1 cut(s)	47
SspMI	CTAG	1 cut(s)	290
StyD4I	CCNGG	4 cut(s)	85, 267, 396, 397
StyI	CCWWGG	1 cut(s)	278
TaiI	ACGT	1 cut(s)	441
TaqI	TCGA	6 cut(s)	181, 327, 468, 507, 525, 534
TasI	AATT	1 cut(s)	239
TauI	GCSGC	1 cut(s)	50
TfiI	GAWTC	1 cut(s)	94
Tru1I	TTAA	2 cut(s)	441, 519
Tru9I	TTAA	2 cut(s)	441, 519
TscAI	CASTG	1 cut(s)	118
TseI	GCWGC	1 cut(s)	423
TspGWI	ACGGA	1 cut(s)	558
TspMI	CCCGGG	1 cut(s)	397
TspRI	CASTG	1 cut(s)	118
VpaK11BI	GGWCC	1 cut(s)	566
XbaI	TCTAGA	1 cut(s)	289
XmaI	CCCGGG	1 cut(s)	397
XmiI	GTMKAC	2 cut(s)	327, 525
XspI	CTAG	1 cut(s)	290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.