Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010245

Physical Location & Seq

Genomic Coordinates Forward (+)

17762970 .. 17771146

Gene Structure 8177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G48110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3204 bp

ATGGCCATCCTCCATTTCTCTCTTCCTCTTATCGTCTCTTTCCTTCGTCCTCACGCCTCTCCTCGCTTCTTCCTCCTCCCTCGCTCTCTTTCTCAGTCCCCTTTCCTCTCCCGCCGCCGTTTTCACCGTACCTCCGCCGTTTCCTCCGCCGCTGTTCATCACCAATCCTATCGTAATCCCGACGATGATGTTACCCGCGCGGTGTCTGTTCCTACATTCCAACAAGCGATTCAACGCCTCCAGGAATATTGGGCTTCCGTTGGATGTGCCGTTATGCAACCAAGTAACACTGAGGTCGGAGCTGGCACCATGAATCCTTGTACCTTTTTGAGGGTTCTTGGTCCTGAACCATGGAATGTTGCTTATGTTGAGCCAAGCATACGTCCTGACGACTCTCGCTATGGAGAGAATCCCAATAGGCTTCAAAGACACACTCAATTTCAAGTCATATTGAAACCTGACCCTGGAAACTCTCAACAGCTCTTTATCAACAGTCTTTCTGCTCTAGGTATTGATGTGACTGCACACGATATACGGTTTGTAGAAGACAACTGGGAGAGCCCGGTGCTTGGTGCTTGGGGGTTGGGCTGGGAGATTTGGATGGATGGTATGGAAATCACACAATTTACTTACTTCCAGCAGGCTGGAAGTCTTCCGTTGTCTCCAGTATCTGTTGAAATAACTTATGGGCTTGAGCGCATCATCATGTTACTTCAGGAAGTTGACCATTTCAAAAAGATCTTATATGCTGATGGAATCACCTATGGGGAGCTTTTCTTGGAAAATGAGAAGGAAATGAGCTCATATTATTTAGAGCATGCTAGTGTGGATCGCCTTCAAAAGCATTTCGATTATTTTGATGAAGAAGCACGTTCCTTGCTTGCCTTAGGACTTCCAATCCCTGCGTATGACCAGCTTCTGAAGACATCTCACGCTTTTAACATTTTAGACGCTAGAGGTTTCATTGGCGTAACTGAACGTGCTCGTTATTTCGGTCGAATGCGTAGCTTGGCTCGCCAATGTGCCCAACTGTGGTTAGCGACACGTGAGTCTCTTGGACATCCTCTTGGTGTTGCCTCCGAACCAGTTCCTCCCGTTTGTCACAGAGCTGCTCTGGAAAAAGTGGCTGAAAAGGTTTCTGAAGATCCAAGATCGTTTATTATTGAGATAGGGACTGAAGAGATGCCACCTCAAGATGTTATCAATGCTAGTGAACAACTCAGGGTCTTAGTGCTAGAATTACTAGAGAACCAAAGATTGCGGCATGGTGCTGTGAAAGCATTTGGCACACCTCGCAGGCTAGTGGTTTTAGTTGATGCTATGTCCTCGAAGCAGCTGGAAGAGGAGGTTGAAGTTCGAGGACCCCCTGCTTCTAAAGCTTTTGATGATGAAGGAAATCCTACAAAGGCTGCTGAGGGTTTTAGCCGCAGATATGGCGTTCCATTGGAAAAATTGTACAGAAAAGTTTCTGGGAAGACAGAATATGTACATGCACGAGTTACAGAGCCAGCTCGACTTGCTTTGGAGGTTCTGTCAGAAGATTTACCTGGTATACTGGCTAAAATATCGTTCCCAAAGTCAATGCGGTGGAACTCTTCAGTAATGTTTAGCAGGCCGATTCGCTGGGTTATGGCCTTACATGGTGATCTGGTTGTGCCATTCTCCTTTGCTGGCATCTCAAGTGGAAATGTATCTTGTGGACTTCGCAATACTGCTTCAGCATCACTGTTGGTACAGAATGCAGAATCCTATGAAGATACTATGAGGAATTCTGGAATCAATATTGAGATTGAGGAAAGGAAGAAAATCATTCTTGAGAAGTCAAATGCACTAGCAAAGAGTGTGAGTGGGCGCCTTGTTGTTCCGCAGAACTTACTTAATGAAGTTGCAAATCTCGTCGAAGCTCCTGTGCCCTTAATTGGAAAGTTCAAGGAATCATTCTTAGAACTTCCAGAGGAGCTATTAACTATTGTTATGCAGAAGCACCAGAAGTATTTTTCCATTATTGATGAGAGTGGACAGCTATTGCCTTACTTTATTGCTGTTGCCAATGGTGCAATAAATGAGGATGTGGTGAAGAAAGGAAATGAAGCAGTTCTCAGGGCACGTTATGAAGATGCAAAGTTCTTCTATGAGGTGGACACAAGGAAAAGATTTTCTGAATTCCGAGATCAGCTACAGGGAATTCTTTTCCATGAAAAGCTGGGGACGATGCTGGATAAGATGAACCGCCTCAAAAAGATGGTATCTAAACTTTGTTTGGCCCTCAAAATTGATGAAGATCTGCTTCCGGTTGTAGAGGATGCTGCCTCACTTGCTATGTCAGATCTTGCAACTGCTGTAGTTACAGAATTTACTGCGCTGTCAGGAATAATGGCTCGTCATTATGCTCTCAGAGATGGCTATTCAGAGCAGATAGCAGAAGCTTTGCTGGAAATTACACTTCCTAGATTTTCTGGAGACGTCATCCCAAAAACAGATGCAGGAATGGTTTTGGCAATAGGTGATAGATTGGATAGCCTTGTTGGTTTATTTGCTGCTGGTTGCCAGCCAAGTTCAACAAATGACCCTTTTGGCCTTAGAAGAATATCATATGGCTTAGTTCAGATTTTGGTCGAGAAGGATAAAAATGTCAACTTCAAACGTGTTCTAGAACTTGCAGCCAGTGTACAACCGACGAAGGTTGAGGCAAACACTGTAGAAGATGTGTATCAATTTGTTACTCGAAGACTGGAACAGCTATTGGTTGACAACGGAGTAAGCCCTGAAGTAGTTAGGTCTGTCCTAGCAGAGCGTGGAAACAATCCTTGTCTGGCAGCACGGACTGCATACAAGACGGAAAAGCTAAGCAAAGGTGAGATGTTTCCGAAGATAGTGGAAGCATATTCTCGTCCCACACGCATTGTCCGTGGGAAAGATGTTGGTGTTGGAGTTGAGGTGGATGAGAATGCATTTGAGACTCCCCAAGAGAGAACGTTGTGGAGTACTTACACCTCTATCAAAGATCGAATTCACACTGGCATTGAAATCGAGGACTTCACCGAGATATCCATGCAATTGGTGGAGCCACTCGAGGATTTCTTCAACAATGTATTTGTAATGGTGGAGGAAGAAAGAGTGAGGAAGAACAGACTCGCTCTGCTTAATAACATTGCCAATCTTCCCAAAGGAGTCATTGACCTCTCATTTTTGCCCGGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045995 GO:0046483 GO:0046983 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2e tRNA_synt_2f

Protein Analysis

1067

Amino Acids

119.77

Weight (kDa)

5.7

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2e	PF02091	73 - 350	6e-133	Glycyl-tRNA synthetase alpha subunit
tRNA_synt_2f	PF02092	386 - 930	9.6e-184	Glycyl-tRNA synthetase beta subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48110
fragaria_vesca	FvH4_7g10270 FvH4_7g10270 FvH4_7g10270 FvH4_7g10270
malus_domestica	MD07G1109400.v1.1
prunus_persica	Prupe.2G132400_v2.0.a1 Prupe.2G132400_v2.0.a1 Prupe.2G132400_v2.0.a1
pyrus_communis	pycom07g09370 pycom07g09390
rosa_chinensis	RchiOBHm_Chr1g0348021
rosa_laevigata	RLG00000028699
rosa_multiflora	Rmu_sc0018061.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307330
rosa_rugosa	Rorug01G0190600
rosa_samantha	Rh1AG209200 Rh1BG174200 Rh1CG193600 Rh1DG204000
rosa_wichuraiana	Rw1G017430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1048
AatII	GACGTC	1 cut(s)	2466
AccB1I	GGYRCC	2 cut(s)	305, 1851
AccI	GTMKAC	1 cut(s)	1552
AccII	CGCG	2 cut(s)	198, 200
AclI	AACGTT	1 cut(s)	2975
AclWI	GGATC	2 cut(s)	837, 1139
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	1768, 2162, 2184, 2351, 3009
AcuI	CTGAAG	7 cut(s)	698, 941, 1161, 1197, 1581, 1701, 2787
AcvI	CACGTG	1 cut(s)	1046
AcyI	GRCGYC	2 cut(s)	1852, 2463
AfaI	GTAC	7 cut(s)	130, 322, 1457, 1488, 1734, 2670, 2986
AfiI	CCNNNNNNNGG	5 cut(s)	330, 464, 569, 1032, 1919
AflIII	ACRYGT	2 cut(s)	1043, 2644
AjnI	CCWGG	3 cut(s)	240, 463, 1546
AjuI	GAANNNNNNNTTGG	2 cut(s)	213, 245
Alw21I	GWGCWC	2 cut(s)	803, 985
Alw26I	GTCTC	5 cut(s)	40, 666, 1056, 2454, 2951
AlwI	GGATC	2 cut(s)	837, 1139
AlwNI	CAGNNNCTG	2 cut(s)	671, 919
Ama87I	CYCGRG	1 cut(s)	3071
AoxI	GGCC	5 cut(s)	3, 1613, 1632, 2262, 2575
ApeKI	GCWGC	7 cut(s)	1109, 1333, 1409, 2306, 2537, 2660, 2816
ApoI	RAATTY	5 cut(s)	1768, 2162, 2184, 2351, 3009
Asp700I	GAANNNNTTC	3 cut(s)	1086, 1465, 2094
AspLEI	GCGC	4 cut(s)	200, 699, 1854, 2362
AspS9I	GGNCC	3 cut(s)	341, 1361, 2263
AsuC2I	CCSGG	2 cut(s)	563, 3195
AsuHPI	GGTGA	8 cut(s)	116, 152, 751, 1655, 2086, 2516, 2867, 3031
AvaI	CYCGRG	1 cut(s)	3071
AvaII	GGWCC	2 cut(s)	341, 1361
AxyI	CCTNAGG	1 cut(s)	886
BaeGI	GKGCMC	3 cut(s)	1027, 1914, 2107
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	305, 1851
BanII	GRGCYC	2 cut(s)	563, 803
BauI	CACGAG	1 cut(s)	1494
BbrPI	CACGTG	1 cut(s)	1046
BbsI	GAAGAC	5 cut(s)	552, 644, 929, 1481, 2734
Bbv12I	GWGCWC	2 cut(s)	803, 985
BbvCI	CCTCAGC	1 cut(s)	1413
BbvI	GCAGC	7 cut(s)	1096, 1345, 1396, 2293, 2524, 2672, 2828
BccI	CCATC	6 cut(s)	14, 595, 599, 746, 2236, 2393
BceAI	ACGGC	3 cut(s)	102, 122, 254
BcgI	CGANNNNNNTGC	2 cut(s)	3010, 3044
BciT130I	CCWGG	3 cut(s)	242, 465, 1548
BcnI	CCSGG	2 cut(s)	563, 3195
BcoDI	GTCTC	5 cut(s)	40, 666, 1056, 2454, 2951
BfmI	CTRYAG	3 cut(s)	2177, 2340, 2697
BfoI	RGCGCY	1 cut(s)	1855
BglII	AGATCT	3 cut(s)	738, 2281, 2326
BlpI	GCTNAGC	1 cut(s)	2846
BmcAI	AGTACT	1 cut(s)	2986
Bme1390I	CCNGG	5 cut(s)	242, 465, 563, 1548, 3195
Bme18I	GGWCC	2 cut(s)	341, 1361
BmeT110I	CYCGRG	1 cut(s)	3071
BmgT120I	GGNCC	3 cut(s)	341, 1361, 2263
BmiI	GGNNCC	4 cut(s)	307, 1363, 1853, 3066
BmrFI	CCNGG	5 cut(s)	242, 465, 563, 1548, 3195
BmrI	ACTGGG	1 cut(s)	562
BmsI	GCATC	9 cut(s)	708, 1173, 1306, 1683, 1730, 2107, 2202, 2293, 2470
BmuI	ACTGGG	1 cut(s)	562
BpiI	GAAGAC	5 cut(s)	552, 644, 929, 1481, 2734
BpmI	CTGGAG	3 cut(s)	224, 648, 2478
Bpu10I	CCTNAGC	1 cut(s)	1413
Bpu1102I	GCTNAGC	1 cut(s)	2846
BpuEI	CTTGAG	4 cut(s)	713, 1176, 1663, 1835
BpuMI	CCSGG	2 cut(s)	563, 3195
BsaAI	YACGTR	1 cut(s)	1046
BsaBI	GATNNNNATC	2 cut(s)	2280, 2709
BsaHI	GRCGYC	2 cut(s)	1852, 2463
BsaJI	CCNNGG	3 cut(s)	350, 463, 2908
BsaWI	WCCGGW	1 cut(s)	2290
BsaXI	ACNNNNNCTCC	6 cut(s)	116, 146, 1517, 1547, 2922, 2952
Bsc4I	CCNNNNNNNGG	5 cut(s)	330, 464, 569, 1032, 1919
Bse1I	ACTGG	7 cut(s)	557, 665, 1085, 1560, 2664, 2736, 3022
Bse21I	CCTNAGG	1 cut(s)	886
Bse3DI	GCAATG	1 cut(s)	3150
Bse8I	GATNNNNATC	2 cut(s)	2280, 2709
BseBI	CCWGG	3 cut(s)	242, 465, 1548
BseDI	CCNNGG	3 cut(s)	350, 463, 2908
BseGI	GGATG	9 cut(s)	6, 269, 606, 610, 1060, 2074, 2308, 2466, 2947
BseJI	GATNNNNATC	2 cut(s)	2280, 2709
BseLI	CCNNNNNNNGG	5 cut(s)	330, 464, 569, 1032, 1919
BseMI	GCAATG	1 cut(s)	3150
BseMII	CTCAG	6 cut(s)	107, 282, 1234, 1404, 2113, 2407
BseNI	ACTGG	7 cut(s)	557, 665, 1085, 1560, 2664, 2736, 3022
BseRI	GAGGAG	4 cut(s)	51, 65, 1358, 1970
BseSI	GKGCMC	3 cut(s)	1027, 1914, 2107
BseXI	GCAGC	7 cut(s)	1096, 1345, 1396, 2293, 2524, 2672, 2828
BseYI	CCCAGC	3 cut(s)	588, 1623, 2203
BsgI	GTGCAG	1 cut(s)	507
Bsh1236I	CGCG	2 cut(s)	198, 200
Bsh1285I	CGRYCG	1 cut(s)	997
BshFI	GGCC	5 cut(s)	5, 1615, 1634, 2264, 2577
BshNI	GGYRCC	2 cut(s)	305, 1851
BsiEI	CGRYCG	1 cut(s)	997
BsiHKAI	GWGCWC	2 cut(s)	803, 985
BsiHKCI	CYCGRG	1 cut(s)	3071
BsiSI	CCGG	3 cut(s)	563, 2291, 3195
BslFI	GGGAC	4 cut(s)	82, 1186, 2221, 2877
BslI	CCNNNNNNNGG	5 cut(s)	330, 464, 569, 1032, 1919
BsmAI	GTCTC	5 cut(s)	40, 666, 1056, 2454, 2951
BsmBI	CGTCTC	2 cut(s)	40, 2454
BsmFI	GGGAC	4 cut(s)	82, 1186, 2221, 2877
BsmI	GAATGC	3 cut(s)	1005, 1744, 2953
BsnI	GGCC	5 cut(s)	5, 1615, 1634, 2264, 2577
BsoBI	CYCGRG	1 cut(s)	3071
Bsp1286I	GDGCHC	6 cut(s)	563, 803, 985, 1027, 1914, 2107
Bsp1407I	TGTACA	3 cut(s)	1455, 1486, 2668
Bsp143I	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
Bsp1720I	GCTNAGC	1 cut(s)	2846
Bsp19I	CCATGG	1 cut(s)	350
BspANI	GGCC	5 cut(s)	5, 1615, 1634, 2264, 2577
BspCNI	CTCAG	6 cut(s)	106, 283, 1233, 1405, 2112, 2406
BspFNI	CGCG	2 cut(s)	198, 200
BspLI	GGNNCC	4 cut(s)	307, 1363, 1853, 3066
BspPI	GGATC	2 cut(s)	837, 1139
BspT107I	GGYRCC	2 cut(s)	305, 1851
BsrDI	GCAATG	1 cut(s)	3150
BsrGI	TGTACA	3 cut(s)	1455, 1486, 2668
BsrI	ACTGG	7 cut(s)	557, 665, 1085, 1560, 2664, 2736, 3022
BssECI	CCNNGG	3 cut(s)	350, 463, 2908
BssMI	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
BssNAI	GTATAC	1 cut(s)	1553
BssNI	GRCGYC	2 cut(s)	1852, 2463
BssSI	CACGAG	1 cut(s)	1494
BssT1I	CCWWGG	1 cut(s)	350
Bst1107I	GTATAC	1 cut(s)	1553
Bst2BI	CACGAG	1 cut(s)	1494
Bst2UI	CCWGG	3 cut(s)	242, 465, 1548
Bst4CI	ACNGT	6 cut(s)	128, 494, 537, 1032, 1728, 2698
Bst6I	CTCTTC	4 cut(s)	27, 1173, 1335, 1600
BstACI	GRCGYC	2 cut(s)	1852, 2463
BstAPI	GCANNNNNTGC	1 cut(s)	2825
BstAUI	TGTACA	3 cut(s)	1455, 1486, 2668
BstBAI	YACGTR	1 cut(s)	1046
BstDSI	CCRYGG	2 cut(s)	350, 2908
BstENI	CCTNNNNNAGG	1 cut(s)	328
BstF5I	GGATG	9 cut(s)	6, 269, 606, 610, 1060, 2074, 2308, 2466, 2947
BstFNI	CGCG	2 cut(s)	198, 200
BstH2I	RGCGCY	1 cut(s)	1855
BstHHI	GCGC	4 cut(s)	200, 699, 1854, 2362
BstKTI	GATC	9 cut(s)	741, 832, 1147, 1154, 1648, 2173, 2284, 2329, 3007
BstMAI	GTCTC	5 cut(s)	40, 666, 1056, 2454, 2951
BstMBI	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
BstMCI	CGRYCG	1 cut(s)	997
BstMWI	GCNNNNNNNGC	9 cut(s)	1014, 1277, 1293, 1376, 1434, 1517, 2054, 2315, 2825
BstNI	CCWGG	3 cut(s)	242, 465, 1548
BstNSI	RCATGY	2 cut(s)	821, 1493
BstSCI	CCNGG	5 cut(s)	240, 463, 561, 1546, 3193
BstSFI	CTRYAG	3 cut(s)	2177, 2340, 2697
BstSLI	GKGCMC	3 cut(s)	1027, 1914, 2107
BstUI	CGCG	2 cut(s)	198, 200
BstV1I	GCAGC	7 cut(s)	1096, 1345, 1396, 2293, 2524, 2672, 2828
BstV2I	GAAGAC	5 cut(s)	552, 644, 929, 1481, 2734
BstX2I	RGATCY	4 cut(s)	738, 1144, 2281, 2326
BstXI	CCANNNNNNTGG	2 cut(s)	644, 3058
BstYI	RGATCY	4 cut(s)	738, 1144, 2281, 2326
BstZ17I	GTATAC	1 cut(s)	1553
Bsu36I	CCTNAGG	1 cut(s)	886
BsuRI	GGCC	5 cut(s)	5, 1615, 1634, 2264, 2577
BtgI	CCRYGG	2 cut(s)	350, 2908
BtsCI	GGATG	9 cut(s)	6, 269, 606, 610, 1060, 2074, 2308, 2466, 2947
BtsIMutI	CAGTG	5 cut(s)	288, 1724, 2671, 2694, 3015
CaiI	CAGNNNCTG	2 cut(s)	671, 919
CfoI	GCGC	4 cut(s)	200, 699, 1854, 2362
Cfr13I	GGNCC	3 cut(s)	341, 1361, 2263
CseI	GACGC	1 cut(s)	959
CsiI	ACCWGGT	1 cut(s)	1546
Csp6I	GTAC	7 cut(s)	129, 321, 1456, 1487, 1733, 2669, 2985
CspCI	CAANNNNNGTGG	2 cut(s)	2884, 2919
CviAII	CATG	9 cut(s)	310, 351, 706, 818, 1265, 1490, 1640, 2195, 3052
CviQI	GTAC	7 cut(s)	129, 321, 1456, 1487, 1733, 2669, 2985
DinI	GGCGCC	1 cut(s)	1853
DpnI	GATC	9 cut(s)	740, 831, 1146, 1153, 1647, 2172, 2283, 2328, 3006
DpnII	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
DrdI	GACNNNNNNGTC	1 cut(s)	1048
DseDI	GACNNNNNNGTC	1 cut(s)	1048
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	27, 1173, 1335, 1600
EarI	CTCTTC	4 cut(s)	27, 1173, 1335, 1600
EciI	GGCGGA	2 cut(s)	124, 136
Ecl136II	GAGCTC	1 cut(s)	801
Eco130I	CCWWGG	1 cut(s)	350
Eco24I	GRGCYC	2 cut(s)	563, 803
Eco32I	GATATC	1 cut(s)	3048
Eco47I	GGWCC	2 cut(s)	341, 1361
Eco53kI	GAGCTC	1 cut(s)	801
Eco57I	CTGAAG	7 cut(s)	698, 941, 1161, 1197, 1581, 1701, 2787
Eco72I	CACGTG	1 cut(s)	1046
Eco81I	CCTNAGG	1 cut(s)	886
Eco88I	CYCGRG	1 cut(s)	3071
EcoICRI	GAGCTC	1 cut(s)	801
EcoNI	CCTNNNNNAGG	1 cut(s)	328
EcoO109I	RGGNCCY	1 cut(s)	1361
EcoRI	GAATTC	4 cut(s)	1768, 2162, 2184, 3009
EcoRII	CCWGG	3 cut(s)	240, 463, 1546
EcoRV	GATATC	1 cut(s)	3048
EcoT14I	CCWWGG	1 cut(s)	350
EcoT22I	ATGCAT	1 cut(s)	2953
EcoT38I	GRGCYC	2 cut(s)	563, 803
EgeI	GGCGCC	1 cut(s)	1853
EheI	GGCGCC	1 cut(s)	1853
ErhI	CCWWGG	1 cut(s)	350
Esp3I	CGTCTC	2 cut(s)	40, 2454
FaeI	CATG	9 cut(s)	313, 354, 709, 821, 1268, 1493, 1643, 2198, 3055
FalI	AAGNNNNNCTT	2 cut(s)	2271, 2303
FaqI	GGGAC	4 cut(s)	82, 1186, 2221, 2877
FatI	CATG	9 cut(s)	309, 350, 705, 817, 1264, 1489, 1639, 2194, 3051
FauI	CCCGC	2 cut(s)	119, 203
FauNDI	CATATG	1 cut(s)	2593
FblI	GTMKAC	1 cut(s)	1552
FokI	GGATG	8 cut(s)	276, 613, 617, 1047, 2081, 2315, 2453, 2954
FriOI	GRGCYC	2 cut(s)	563, 803
GlaI	GCGC	4 cut(s)	199, 698, 1853, 2361
GsaI	CCCAGC	3 cut(s)	592, 1627, 2207
GsuI	CTGGAG	3 cut(s)	224, 648, 2478
HaeII	RGCGCY	1 cut(s)	1855
HaeIII	GGCC	5 cut(s)	5, 1615, 1634, 2264, 2577
HapII	CCGG	3 cut(s)	563, 2291, 3195
HgaI	GACGC	1 cut(s)	959
HhaI	GCGC	4 cut(s)	200, 699, 1854, 2362
Hin1I	GRCGYC	2 cut(s)	1852, 2463
Hin1II	CATG	9 cut(s)	313, 354, 709, 821, 1268, 1493, 1643, 2198, 3055
Hin6I	GCGC	4 cut(s)	198, 697, 1852, 2360
HinP1I	GCGC	4 cut(s)	198, 697, 1852, 2360
HincII	GTYRAC	3 cut(s)	724, 2635, 2749
HindII	GTYRAC	3 cut(s)	724, 2635, 2749
HindIII	AAGCTT	2 cut(s)	1377, 2424
HpaII	CCGG	3 cut(s)	563, 2291, 3195
HphI	GGTGA	8 cut(s)	116, 152, 751, 1655, 2086, 2516, 2867, 3031
Hpy166II	GTNNAC	9 cut(s)	724, 1214, 1553, 1700, 2018, 2140, 2635, 2669, 2749
Hpy8I	GTNNAC	9 cut(s)	724, 1214, 1553, 1700, 2018, 2140, 2635, 2669, 2749
Hpy99I	CGWCG	3 cut(s)	185, 1901, 2680
HpyAV	CCTTC	6 cut(s)	53, 784, 845, 1385, 2614, 2674
HpyCH4III	ACNGT	6 cut(s)	128, 494, 537, 1032, 1728, 2698
HpyCH4IV	ACGT	8 cut(s)	382, 871, 979, 1045, 2107, 2463, 2644, 2975
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1014, 1277, 1293, 1376, 1434, 1517, 2054, 2315, 2825
HpySE526I	ACGT	8 cut(s)	382, 871, 979, 1045, 2107, 2463, 2644, 2975
Hsp92I	GRCGYC	2 cut(s)	1852, 2463
Hsp92II	CATG	9 cut(s)	313, 354, 709, 821, 1268, 1493, 1643, 2198, 3055
HspAI	GCGC	4 cut(s)	198, 697, 1852, 2360
KasI	GGCGCC	1 cut(s)	1851
Kzo9I	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
LmnI	GCTCC	5 cut(s)	299, 769, 1909, 1957, 3064
Lsp1109I	GCAGC	7 cut(s)	1096, 1345, 1396, 2293, 2524, 2672, 2828
LweI	GCATC	9 cut(s)	708, 1173, 1306, 1683, 1730, 2107, 2202, 2293, 2470
MabI	ACCWGGT	1 cut(s)	1546
MaeII	ACGT	8 cut(s)	382, 871, 979, 1045, 2107, 2463, 2644, 2975
MaeIII	GTNAC	9 cut(s)	190, 284, 517, 708, 970, 1100, 1498, 2344, 2719
MalI	GATC	9 cut(s)	740, 831, 1146, 1153, 1647, 2172, 2283, 2328, 3006
MboI	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
MfeI	CAATTG	1 cut(s)	3056
MflI	RGATCY	4 cut(s)	738, 1144, 2281, 2326
MhlI	GDGCHC	6 cut(s)	563, 803, 985, 1027, 1914, 2107
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	1852
MlyI	GAGTC	5 cut(s)	386, 1058, 2953, 3126, 3180
MmeI	TCCRAC	4 cut(s)	241, 244, 277, 2908
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	2953
MroXI	GAANNNNTTC	3 cut(s)	1086, 1465, 2094
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	939, 1878, 1916, 1964, 3144
MslI	CAYNNNNRTG	2 cut(s)	704, 822
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	152, 1336
MspI	CCGG	3 cut(s)	563, 2291, 3195
MspR9I	CCNGG	5 cut(s)	242, 465, 563, 1548, 3195
MunI	CAATTG	1 cut(s)	3056
Mva1269I	GAATGC	3 cut(s)	1005, 1744, 2953
MvaI	CCWGG	3 cut(s)	242, 465, 1548
MvnI	CGCG	2 cut(s)	198, 200
MwoI	GCNNNNNNNGC	9 cut(s)	1014, 1277, 1293, 1376, 1434, 1517, 2054, 2315, 2825
NarI	GGCGCC	1 cut(s)	1852
NciI	CCSGG	2 cut(s)	563, 3195
NcoI	CCATGG	1 cut(s)	350
NdeI	CATATG	1 cut(s)	2593
NdeII	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
NlaIII	CATG	9 cut(s)	313, 354, 709, 821, 1268, 1493, 1643, 2198, 3055
NlaIV	GGNNCC	4 cut(s)	307, 1363, 1853, 3066
NmuCI	GTSAC	2 cut(s)	517, 1100
NsiI	ATGCAT	1 cut(s)	2953
NspI	RCATGY	2 cut(s)	821, 1493
PaeI	GCATGC	1 cut(s)	821
PaeR7I	CTCGAG	1 cut(s)	3071
PcsI	WCGNNNNNNNCGW	1 cut(s)	2905
PctI	GAATGC	3 cut(s)	1005, 1744, 2953
PdmI	GAANNNNTTC	3 cut(s)	1086, 1465, 2094
PfeI	GAWTC	8 cut(s)	229, 313, 409, 756, 1618, 1745, 1776, 1934
PfoI	TCCNGGA	1 cut(s)	240
PleI	GAGTC	5 cut(s)	386, 1057, 2953, 3126, 3179
PluTI	GGCGCC	1 cut(s)	1855
PmaCI	CACGTG	1 cut(s)	1046
PmlI	CACGTG	1 cut(s)	1046
PpsI	GAGTC	5 cut(s)	386, 1057, 2953, 3126, 3179
Ppu21I	YACGTR	1 cut(s)	1046
PpuMI	RGGWCCY	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	803
Psp1406I	AACGTT	1 cut(s)	2975
Psp5II	RGGWCCY	1 cut(s)	1361
Psp6I	CCWGG	3 cut(s)	240, 463, 1546
PspCI	CACGTG	1 cut(s)	1046
PspFI	CCCAGC	3 cut(s)	588, 1623, 2203
PspGI	CCWGG	3 cut(s)	240, 463, 1546
PspN4I	GGNNCC	4 cut(s)	307, 1363, 1853, 3066
PspPI	GGNCC	3 cut(s)	341, 1361, 2263
PspPPI	RGGWCCY	1 cut(s)	1361
PspXI	VCTCGAGB	1 cut(s)	3071
PstNI	CAGNNNCTG	2 cut(s)	671, 919
PsuI	RGATCY	4 cut(s)	738, 1144, 2281, 2326
PvuII	CAGCTG	1 cut(s)	1336
RsaI	GTAC	7 cut(s)	130, 322, 1457, 1488, 1734, 2670, 2986
RsaNI	GTAC	7 cut(s)	129, 321, 1456, 1487, 1733, 2669, 2985
RseI	CAYNNNNRTG	2 cut(s)	704, 822
SacI	GAGCTC	1 cut(s)	803
SaqAI	TTAA	5 cut(s)	939, 1878, 1916, 1964, 3144
Sau3AI	GATC	9 cut(s)	738, 829, 1144, 1151, 1645, 2170, 2281, 2326, 3004
Sau96I	GGNCC	3 cut(s)	341, 1361, 2263
ScaI	AGTACT	1 cut(s)	2986
SchI	GAGTC	5 cut(s)	386, 1058, 2953, 3126, 3180
ScrFI	CCNGG	5 cut(s)	242, 465, 563, 1548, 3195
SduI	GDGCHC	6 cut(s)	563, 803, 985, 1027, 1914, 2107
SexAI	ACCWGGT	1 cut(s)	1546
SfaNI	GCATC	9 cut(s)	708, 1173, 1306, 1683, 1730, 2107, 2202, 2293, 2470
SfcI	CTRYAG	3 cut(s)	2177, 2340, 2697
SfoI	GGCGCC	1 cut(s)	1853
Sfr274I	CTCGAG	1 cut(s)	3071
SinI	GGWCC	2 cut(s)	341, 1361
SlaI	CTCGAG	1 cut(s)	3071
SmiMI	CAYNNNNRTG	2 cut(s)	704, 822
SmlI	CTYRAG	5 cut(s)	692, 1191, 1678, 1814, 3071
SmoI	CTYRAG	5 cut(s)	692, 1191, 1678, 1814, 3071
SphI	GCATGC	1 cut(s)	821
SspDI	GGCGCC	1 cut(s)	1851
SspI	AATATT	2 cut(s)	248, 1783
SstI	GAGCTC	1 cut(s)	803
StyD4I	CCNGG	5 cut(s)	240, 463, 561, 1546, 3193
StyI	CCWWGG	1 cut(s)	350
TaaI	ACNGT	6 cut(s)	128, 494, 537, 1032, 1728, 2698
TaiI	ACGT	8 cut(s)	385, 874, 982, 1048, 2110, 2466, 2647, 2978
TaqII	GACCGA	1 cut(s)	983
TatI	WGTACW	4 cut(s)	1455, 1486, 2668, 2984
TauI	GCSGC	4 cut(s)	117, 152, 1264, 1428
TfiI	GAWTC	8 cut(s)	229, 313, 409, 756, 1618, 1745, 1776, 1934
Tru1I	TTAA	5 cut(s)	939, 1878, 1916, 1964, 3144
Tru9I	TTAA	5 cut(s)	939, 1878, 1916, 1964, 3144
TscAI	CASTG	5 cut(s)	295, 1731, 2671, 2701, 3022
TseFI	GTSAC	2 cut(s)	517, 1100
TseI	GCWGC	7 cut(s)	1109, 1333, 1409, 2306, 2537, 2660, 2816
Tsp45I	GTSAC	2 cut(s)	517, 1100
TspGWI	ACGGA	6 cut(s)	247, 645, 2769, 2836, 2852, 2897
TspRI	CASTG	5 cut(s)	295, 1731, 2671, 2701, 3022
VpaK11BI	GGWCC	2 cut(s)	341, 1361
XagI	CCTNNNNNAGG	1 cut(s)	328
XapI	RAATTY	5 cut(s)	1768, 2162, 2184, 2351, 3009
XbaI	TCTAGA	1 cut(s)	2650
XceI	RCATGY	2 cut(s)	821, 1493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3058
XhoI	CTCGAG	1 cut(s)	3071
XmiI	GTMKAC	1 cut(s)	1552
XmnI	GAANNNNTTC	3 cut(s)	1086, 1465, 2094
ZraI	GACGTC	1 cut(s)	2464
ZrmI	AGTACT	1 cut(s)	2986
Zsp2I	ATGCAT	1 cut(s)	2953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.