Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010245

Physical Location & Seq

Genomic Coordinates Forward (+)

8668882 .. 8683559

Gene Structure 14678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g09390.27

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3216 bp

ATGGCTATCCTCGCTCTCCCACTAGTCATCTCCTTTCTCAAGCCCCACGCTTCCCGCCTCCGCCTCCTACGCCCCGGCAACCCCAATAATCCTACCTGTCTCTACAACCCACTCTGCCACCGCCACTGCCGCCGCTTCACGAAAACCACCGTCTCCGCAGTTAGTACCTCCGCGGTTCCACAGCACGACTCGTCCACAAACCCCAATGATGAGCCCCGGAAAGCCTCCGTCCTTACTTTCCAGCAAGCCATTCAGCGGCTCCAGGAATATTGGGCTTCAGTTGGATGTGCCATAATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCCTTGACATTCTTAAGGGTTCTTGGTCCAGAACCATGGAATGTTGCGTATGTGGAGCCTAGCATCCGACCAGATGATAGTCGTTATGGGGAAAATCCAAACAGGCTCCAGAGACACACTCAATTTCAGGTTATATTGAAGCCTGATCCTGGAAACTCACAAGACCTTTTCATCCGCAGCTTATCAGCTTTAGGGATTGATGTCCGTGCACATGATATACGATTTGTGGAGGACAACTGGGAGAGTCCGGTGCTAGGAGCTTGGGGTTTGGGTTGGGAAATCTGGATGGATGGAATGGAGATTACACAGTTCACCTACTTTCAGCAGGCTGGAAGTCTTCCCGTATCACCAGTATCGGTGGAAATCACTTATGGTCTAGAGCGTATCCTCATGCTGCTTCAGGGAGTTGATCATTTTAAGAAAATTCAGTATGCTGATGGAATTACATACGGAGAGCTATTCTTGGAGAATGAGAAGGAAATGAGTGCATATTATCTAGAGAATGCTGAGGTGCATCATCTTCAGAAACACTTTGATCTTTTCGAGGAGGAAGCTCGTTCATTGCTTGCTTCAGGCCTCGCAATTCCTGCGTATGATCAGCTTCTGAAAACATCACATTCCTTCAATATCTTAGACTCTAGAGGCTTTGTTGGGGTAACAGAGCGTGCTCGTTACTTTGGTCGTATGCGTAGTTTAGCTCGTCAGTGTGCACAACTTTGGTTAAAGACCAGGGAGTCCCTTGGATATCCGTTAGGCGCAATTTCTGAAACTGTTAGTCTTGTATGTCCTCAAGAGCTTGTGGAGGCAGCGGTTAAAAAGGTGCATGATGATTCAAGGTTATTTGTTCTTGAAATTGGAACTGAAGAGATGCCACCACAAGATGTTGTCGATGCCAGCCAGCAACTGAAAGATTTAACCGCTCAGTTACTAGCAAAGCAAAGACTGAGCCATGGTGAGATACAAGCTTTCGGCACACCTCGCAGACTGGTGGTTTCTGTCGAGAATCTCTGCACTAAACAAATTGAGAATGAGGTTGAGGTTCGAGGACCTCCTGTTTCAAAAGCTTATGATGATCAGGGAAATCCTACAAAGGTGATACCTGAGTTTCCATTTCCTTTCTTTCCTGAGCTTGTTTCTCACTTTTCAGGGAAAACAGAGTATGTCTATGCTCGAGTAACAGAGTCTGCCCGACTTGCTGTCGAGGTTTTGTCTGAGGATTTTCCCAATATGATTGCTAGACTTTCATTTCCAAAGTCAATGCGCTGGAACTCTCAGGTTATGTTTAGCAGACCTATTCGTTGGATTTTGGCACTCCATGGAGATGTAGTAGTGCCCTTTACTTTTGCTGAAGTTTTGAGTGGAAACCTGTCACATGGTCTCCGTAACACGCCTGCATCTACTGTCATGGTTGATAGTGCTGAATCTTATGCTGGTATAATGAGGAAGGCTGGGATCAATATTGAAATTGAGGAACGTAAGAAAACAGTATTGGAGGGGTCTAATGCATTAGCCAGAAGTGTAAACGGACGAGTGTTTATTCAGGAGGGCTTACTTAATGAGGTTGTAAATCTTGTTGAGGCACCTGTTCCGGTCCTTGGGGAGTTTAAAAGGTCCTTCTTAGAGCTTCCTAGTGATCTTCTGACTATGGTTATGCAGAAGCATCAGAAGTATTTTGCCGTGAAAGATGAAAATGGAAGGCTGCTGCCATATTTCATTGCTGTGGCAAATGGAGCAATTGATGAGATTGTGGTCAAAAAAGGAAATGAGGCTGTACTGAGAGCTCGCTATGAAGATGCTAAGTTCTTCTATGAAATGGATACACGGAAAAGGTTTTCAGAATTTAGAATTCAACTGAAAGGGATTCTTTTCCATGAGAAGTTAGGAACAATGCTGGACAAGGTGCTGCGCATACAGAATACGGTTAACAAGCTAAGCTTGGCCCTTGGAATGGATGAAAATACGAACAAAGTTGTCCAGGATGCTGCATCACTCGCTATGGCAGATCTGGCTACAGCGGTTGTCACAGAGTTTACTTCCCTTTCAGGAGTAATGGCTCGTCATTACGCTCTTAGAGATGGCTATTCAGAGCAGGTTGCAGAAGCTTTGTTTGAGATCACACTTCCGAGGTTTTCTGGAGATACGCTTCCTAAAACTGATGCAGGCATAGTTCTGTCTGTCGCTGACAGATTAGATAGTCTTGTCGGCTTATTTGCTGCTGGTTGTCAGCCCAGTTCTGCTAATGATGCATTTGGCCTGCGACGAATCTCATATGGTCTTGTCCAGGTGTTGGTGGAAAAAGATAAGCATCTGGACTTACAACAAGCATTGGAACTTGCTGCAGATGTCCAACCCATTGAAGTAGATGCAAGTACTATAAATGATGCACATCAATTTGTTACACGGAGATTAGAACAATATCTGGTTGATAAGGGAATAAGTTCAGAAGTGGTTCGTTCTGTACTTGCAGAGCGTGCAAATTCACCTTGCCTCGCAGCAAGATCTGCCTGTAAAATGGAAGCCTTGTCAAAAGGCGAGCTTTTCCAAAAGGTTGTTGAAGCATATTCTCGTCCTACAAGAATAGTTCGAGGGAAGGATGTGGATCCTCATATTGAGGTGGATGAGGCAGCCTTTGAGACAGACGAAGAGAAAGCATTATGGAATTCTTTCTTGTCCGTTCAAAACAAAATATGTCATGGTATTGAGGTTGATGAGTTTGTTGCAGTATCGTCGCAGCTACTACAACCCCTCGAGGATTTCTTTAATCATGTGTTTGTAATGGTGGAAGAAGAAAGAATTCGGAAGAACAGGCTTGCTTTGCTGAAGAAAGTTTCCGACCTTCCAAGAGGAGTAGCCGACCTGTCAATTTTGCCTGGATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045995 GO:0046483 GO:0046983 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2e tRNA_synt_2f

Protein Analysis

1072

Amino Acids

119.95

Weight (kDa)

5.67

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48110
fragaria_vesca	FvH4_7g10270 FvH4_7g10270 FvH4_7g10270 FvH4_7g10270
malus_domestica	MD07G1109400.v1.1
prunus_persica	Prupe.2G132400_v2.0.a1 Prupe.2G132400_v2.0.a1 Prupe.2G132400_v2.0.a1
pyrus_communis	pycom07g09370 pycom07g09390
rosa_chinensis	RchiOBHm_Chr1g0348021
rosa_laevigata	RLG00000028699
rosa_multiflora	Rmu_sc0018061.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307330
rosa_rugosa	Rorug01G0190600
rosa_samantha	Rh1AG209200 Rh1BG174200 Rh1CG193600 Rh1DG204000
rosa_wichuraiana	Rw1G017430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1069
AbsI	CCTCGAGG	1 cut(s)	3083
Acc16I	TGCGCA	1 cut(s)	2243
Acc36I	ACCTGC	1 cut(s)	2416
AccB1I	GGYRCC	1 cut(s)	1915
AccB7I	CCANNNNNTGG	1 cut(s)	2623
AccBSI	CCGCTC	1 cut(s)	1256
AccII	CGCG	1 cut(s)	173
AclWI	GGATC	4 cut(s)	476, 1796, 2930, 2943
AcsI	RAATTY	6 cut(s)	759, 2174, 2181, 2812, 2995, 3129
AcuI	CTGAAG	7 cut(s)	261, 719, 842, 891, 1218, 1704, 3176
AfaI	GTAC	4 cut(s)	166, 2109, 2707, 2796
AfiI	CCNNNNNNNGG	6 cut(s)	255, 485, 590, 1931, 2284, 2623
AflII	CTTAAG	1 cut(s)	349
AhdI	GACNNNNNGTC	1 cut(s)	1532
AhlI	ACTAGT	1 cut(s)	22
AjnI	CCWGG	6 cut(s)	261, 484, 1064, 2310, 2616, 3205
AjuI	GAANNNNNNNTTGG	2 cut(s)	1808, 1840
Alw21I	GWGCWC	4 cut(s)	547, 1006, 1048, 2119
Alw26I	GTCTC	5 cut(s)	104, 157, 442, 1718, 2963
Alw44I	GTGCAC	2 cut(s)	543, 1044
AlwI	GGATC	4 cut(s)	476, 1796, 2930, 2943
AlwNI	CAGNNNCTG	3 cut(s)	940, 1240, 1520
Ama87I	CYCGRG	2 cut(s)	1506, 3083
AoxI	GGCC	3 cut(s)	910, 2274, 2587
ApaLI	GTGCAC	2 cut(s)	543, 1044
ApoI	RAATTY	6 cut(s)	759, 2174, 2181, 2812, 2995, 3129
Asp700I	GAANNNNTTC	4 cut(s)	2773, 2784, 2999, 3129
AspLEI	GCGC	3 cut(s)	1094, 1599, 2244
AspS9I	GGNCC	5 cut(s)	362, 1382, 1927, 1947, 2275
AsuC2I	CCSGG	2 cut(s)	75, 217
AsuHPI	GGTGA	5 cut(s)	640, 675, 1301, 1441, 2808
AvaI	CYCGRG	2 cut(s)	1506, 3083
AvaII	GGWCC	4 cut(s)	362, 1382, 1927, 1947
BaeGI	GKGCMC	3 cut(s)	547, 1048, 1671
BaeI	ACNNNNGTAYC	2 cut(s)	1424, 1457
BamHI	GGATCC	1 cut(s)	2935
BanI	GGYRCC	1 cut(s)	1915
BanII	GRGCYC	2 cut(s)	216, 2119
BbsI	GAAGAC	1 cut(s)	665
Bbv12I	GWGCWC	4 cut(s)	547, 1006, 1048, 2119
BbvCI	CCTCAGC	1 cut(s)	843
BccI	CCATC	4 cut(s)	616, 620, 767, 2405
BceAI	ACGGC	1 cut(s)	1997
BcgI	CGANNNNNNTGC	2 cut(s)	3045, 3079
BciT130I	CCWGG	6 cut(s)	263, 486, 1066, 2312, 2618, 3207
BciVI	GTATCC	2 cut(s)	731, 2146
BclI	TGATCA	3 cut(s)	745, 931, 1408
BcnI	CCSGG	2 cut(s)	75, 217
BcoDI	GTCTC	5 cut(s)	104, 157, 442, 1718, 2963
BcuI	ACTAGT	1 cut(s)	22
BfaI	CTAG	9 cut(s)	23, 396, 590, 713, 833, 975, 1265, 1572, 1965
BfmI	CTRYAG	2 cut(s)	2346, 2673
BfrI	CTTAAG	1 cut(s)	349
BfuAI	ACCTGC	1 cut(s)	2416
BfuI	GTATCC	2 cut(s)	731, 2146
BglII	AGATCT	2 cut(s)	2338, 2834
BlpI	GCTNAGC	1 cut(s)	2267
BmcAI	AGTACT	1 cut(s)	2707
Bme1390I	CCNGG	8 cut(s)	75, 217, 263, 486, 1066, 2312, 2618, 3207
Bme18I	GGWCC	4 cut(s)	362, 1382, 1927, 1947
BmeRI	GACNNNNNGTC	1 cut(s)	1532
BmeT110I	CYCGRG	2 cut(s)	1506, 3083
BmgT120I	GGNCC	5 cut(s)	362, 1382, 1927, 1947, 2275
BmiI	GGNNCC	6 cut(s)	177, 260, 393, 443, 1917, 2937
BmrFI	CCNGG	8 cut(s)	75, 217, 263, 486, 1066, 2312, 2618, 3207
BmrI	ACTGGG	2 cut(s)	583, 2559
BmuI	ACTGGG	2 cut(s)	583, 2559
BpiI	GAAGAC	1 cut(s)	665
BplI	GAGNNNNNCTC	2 cut(s)	439, 471
BpmI	CTGGAG	3 cut(s)	245, 428, 2490
Bpu10I	CCTNAGC	2 cut(s)	843, 1461
Bpu1102I	GCTNAGC	1 cut(s)	2267
BpuEI	CTTGAG	2 cut(s)	23, 1110
BpuMI	CCSGG	2 cut(s)	75, 217
BsaBI	GATNNNNATC	3 cut(s)	2640, 2721, 2934
BsaI	GGTCTC	1 cut(s)	1718
BsaWI	WCCGGW	2 cut(s)	583, 1924
BsaXI	ACNNNNNCTCC	4 cut(s)	1647, 1677, 1698, 1728
Bsc4I	CCNNNNNNNGG	6 cut(s)	255, 485, 590, 1931, 2284, 2623
Bse1I	ACTGG	4 cut(s)	578, 686, 1326, 2565
Bse3DI	GCAATG	3 cut(s)	305, 896, 2049
Bse8I	GATNNNNATC	3 cut(s)	2640, 2721, 2934
BseBI	CCWGG	6 cut(s)	263, 486, 1066, 2312, 2618, 3207
BseGI	GGATG	9 cut(s)	290, 399, 507, 627, 631, 2293, 2320, 2935, 2959
BseJI	GATNNNNATC	3 cut(s)	2640, 2721, 2934
BseLI	CCNNNNNNNGG	6 cut(s)	255, 485, 590, 1931, 2284, 2623
BseMI	GCAATG	3 cut(s)	305, 896, 2049
BseMII	CTCAG	8 cut(s)	834, 1271, 1271, 1428, 1452, 1539, 1622, 2102
BseNI	ACTGG	4 cut(s)	578, 686, 1326, 2565
BseRI	GAGGAG	2 cut(s)	896, 3195
BseSI	GKGCMC	3 cut(s)	547, 1048, 1671
BseYI	CCCAGC	2 cut(s)	323, 1784
BsgI	GTGCAG	1 cut(s)	1330
Bsh1236I	CGCG	1 cut(s)	173
BshFI	GGCC	3 cut(s)	912, 2276, 2589
BshNI	GGYRCC	1 cut(s)	1915
BsiHKAI	GWGCWC	4 cut(s)	547, 1006, 1048, 2119
BsiHKCI	CYCGRG	2 cut(s)	1506, 3083
BsiSI	CCGG	4 cut(s)	75, 217, 584, 1925
BslFI	GGGAC	2 cut(s)	340, 1057
BslI	CCNNNNNNNGG	6 cut(s)	255, 485, 590, 1931, 2284, 2623
BsmAI	GTCTC	5 cut(s)	104, 157, 442, 1718, 2963
BsmBI	CGTCTC	1 cut(s)	157
BsmFI	GGGAC	2 cut(s)	340, 1057
BsmI	GAATGC	1 cut(s)	844
BsnI	GGCC	3 cut(s)	912, 2276, 2589
Bso31I	GGTCTC	1 cut(s)	1718
BsoBI	CYCGRG	2 cut(s)	1506, 3083
Bsp1286I	GDGCHC	6 cut(s)	216, 547, 1006, 1048, 1671, 2119
Bsp1720I	GCTNAGC	1 cut(s)	2267
Bsp19I	CCATGG	3 cut(s)	371, 1285, 1651
BspANI	GGCC	3 cut(s)	912, 2276, 2589
BspCNI	CTCAG	8 cut(s)	835, 1270, 1272, 1429, 1453, 1540, 1621, 2103
BspFNI	CGCG	1 cut(s)	173
BspLI	GGNNCC	6 cut(s)	177, 260, 393, 443, 1917, 2937
BspMAI	CTGCAG	1 cut(s)	2677
BspMI	ACCTGC	1 cut(s)	2416
BspPI	GGATC	4 cut(s)	476, 1796, 2930, 2943
BspT107I	GGYRCC	1 cut(s)	1915
BspTI	CTTAAG	1 cut(s)	349
BspTNI	GGTCTC	1 cut(s)	1718
BsrBI	CCGCTC	1 cut(s)	1256
BsrDI	GCAATG	3 cut(s)	305, 896, 2049
BsrI	ACTGG	4 cut(s)	578, 686, 1326, 2565
BssT1I	CCWWGG	6 cut(s)	371, 1075, 1285, 1651, 1930, 2278
Bst2UI	CCWGG	6 cut(s)	263, 486, 1066, 2312, 2618, 3207
Bst4CI	ACNGT	6 cut(s)	151, 645, 1108, 1738, 1822, 2257
Bst6I	CTCTTC	2 cut(s)	1194, 2973
BstAFI	CTTAAG	1 cut(s)	349
BstAPI	GCANNNNNTGC	3 cut(s)	923, 2807, 2837
BstDSI	CCRYGG	4 cut(s)	171, 371, 1285, 1651
BstF5I	GGATG	9 cut(s)	290, 399, 507, 627, 631, 2293, 2320, 2935, 2959
BstFNI	CGCG	1 cut(s)	173
BstHHI	GCGC	3 cut(s)	1094, 1599, 2244
BstMAI	GTCTC	5 cut(s)	104, 157, 442, 1718, 2963
BstNI	CCWGG	6 cut(s)	263, 486, 1066, 2312, 2618, 3207
BstSCI	CCNGG	8 cut(s)	73, 215, 261, 484, 1064, 2310, 2616, 3205
BstSFI	CTRYAG	2 cut(s)	2346, 2673
BstSLI	GKGCMC	3 cut(s)	547, 1048, 1671
BstUI	CGCG	1 cut(s)	173
BstV2I	GAAGAC	1 cut(s)	665
BstX2I	RGATCY	3 cut(s)	2338, 2834, 2935
BstXI	CCANNNNNNTGG	1 cut(s)	372
BstYI	RGATCY	3 cut(s)	2338, 2834, 2935
BsuI	GTATCC	2 cut(s)	731, 2146
BsuRI	GGCC	3 cut(s)	912, 2276, 2589
BtgI	CCRYGG	4 cut(s)	171, 371, 1285, 1651
BtsCI	GGATG	9 cut(s)	290, 399, 507, 627, 631, 2293, 2320, 2935, 2959
BtsI	GCAGTG	1 cut(s)	124
BtsIMutI	CAGTG	2 cut(s)	124, 1046
BveI	ACCTGC	1 cut(s)	2416
CaiI	CAGNNNCTG	3 cut(s)	940, 1240, 1520
CfoI	GCGC	3 cut(s)	1094, 1599, 2244
Cfr13I	GGNCC	5 cut(s)	362, 1382, 1927, 1947, 2275
Cfr42I	CCGCGG	1 cut(s)	174
Csp6I	GTAC	4 cut(s)	165, 2108, 2706, 2795
CviQI	GTAC	4 cut(s)	165, 2108, 2706, 2795
DraI	TTTAAA	1 cut(s)	1942
DrdI	GACNNNNNNGTC	1 cut(s)	1069
DriI	GACNNNNNGTC	1 cut(s)	1532
DseDI	GACNNNNNNGTC	1 cut(s)	1069
Eam1104I	CTCTTC	2 cut(s)	1194, 2973
Eam1105I	GACNNNNNGTC	1 cut(s)	1532
EarI	CTCTTC	2 cut(s)	1194, 2973
EciI	GGCGGA	1 cut(s)	50
Ecl136II	GAGCTC	1 cut(s)	2117
Eco130I	CCWWGG	6 cut(s)	371, 1075, 1285, 1651, 1930, 2278
Eco147I	AGGCCT	1 cut(s)	912
Eco24I	GRGCYC	2 cut(s)	216, 2119
Eco31I	GGTCTC	1 cut(s)	1718
Eco32I	GATATC	1 cut(s)	1082
Eco47I	GGWCC	4 cut(s)	362, 1382, 1927, 1947
Eco53kI	GAGCTC	1 cut(s)	2117
Eco57I	CTGAAG	7 cut(s)	261, 719, 842, 891, 1218, 1704, 3176
Eco88I	CYCGRG	2 cut(s)	1506, 3083
EcoICRI	GAGCTC	1 cut(s)	2117
EcoO109I	RGGNCCY	2 cut(s)	1382, 1947
EcoRI	GAATTC	3 cut(s)	2181, 2995, 3129
EcoRII	CCWGG	6 cut(s)	261, 484, 1064, 2310, 2616, 3205
EcoRV	GATATC	1 cut(s)	1082
EcoT14I	CCWWGG	6 cut(s)	371, 1075, 1285, 1651, 1930, 2278
EcoT22I	ATGCAT	2 cut(s)	1843, 2584
EcoT38I	GRGCYC	2 cut(s)	216, 2119
ErhI	CCWWGG	6 cut(s)	371, 1075, 1285, 1651, 1930, 2278
Esp3I	CGTCTC	1 cut(s)	157
FalI	AAGNNNNNCTT	6 cut(s)	2184, 2216, 2255, 2287, 2856, 2888
FaqI	GGGAC	2 cut(s)	340, 1057
FauI	CCCGC	1 cut(s)	62
FauNDI	CATATG	1 cut(s)	2605
FbaI	TGATCA	3 cut(s)	745, 931, 1408
FokI	GGATG	9 cut(s)	297, 386, 494, 634, 638, 2300, 2327, 2942, 2966
FriOI	GRGCYC	2 cut(s)	216, 2119
FspBI	CTAG	9 cut(s)	23, 396, 590, 713, 833, 975, 1265, 1572, 1965
FspI	TGCGCA	1 cut(s)	2243
GlaI	GCGC	3 cut(s)	1093, 1598, 2243
GsaI	CCCAGC	2 cut(s)	327, 1788
GsuI	CTGGAG	3 cut(s)	245, 428, 2490
HaeIII	GGCC	3 cut(s)	912, 2276, 2589
HapII	CCGG	4 cut(s)	75, 217, 584, 1925
HhaI	GCGC	3 cut(s)	1094, 1599, 2244
Hin6I	GCGC	3 cut(s)	1092, 1597, 2242
HinP1I	GCGC	3 cut(s)	1092, 1597, 2242
HincII	GTYRAC	1 cut(s)	2260
HindII	GTYRAC	1 cut(s)	2260
HindIII	AAGCTT	4 cut(s)	1299, 1398, 2269, 2436
HpaI	GTTAAC	1 cut(s)	2260
HpaII	CCGG	4 cut(s)	75, 217, 584, 1925
HphI	GGTGA	5 cut(s)	640, 675, 1301, 1441, 2808
Hpy166II	GTNNAC	7 cut(s)	195, 545, 648, 1046, 1858, 2260, 2367
Hpy8I	GTNNAC	7 cut(s)	195, 545, 648, 1046, 1858, 2260, 2367
Hpy99I	CGWCG	2 cut(s)	2598, 3067
HpyAV	CCTTC	7 cut(s)	805, 967, 1774, 1960, 2025, 2920, 3182
HpyCH4III	ACNGT	6 cut(s)	151, 645, 1108, 1738, 1822, 2257
HpyCH4IV	ACGT	1 cut(s)	1810
HpySE526I	ACGT	1 cut(s)	1810
HspAI	GCGC	3 cut(s)	1092, 1597, 2242
Ksp22I	TGATCA	3 cut(s)	745, 931, 1408
KspAI	GTTAAC	1 cut(s)	2260
KspI	CCGCGG	1 cut(s)	174
LmnI	GCTCC	6 cut(s)	264, 320, 391, 447, 593, 2066
MaeI	CTAG	9 cut(s)	23, 396, 590, 713, 833, 975, 1265, 1572, 1965
MaeII	ACGT	1 cut(s)	1810
MaeIII	GTNAC	8 cut(s)	991, 1007, 1260, 1510, 1704, 1718, 2356, 2731
MbiI	CCGCTC	1 cut(s)	1256
MfeI	CAATTG	1 cut(s)	2070
MflI	RGATCY	3 cut(s)	2338, 2834, 2935
MhlI	GDGCHC	6 cut(s)	216, 547, 1006, 1048, 1671, 2119
MlyI	GAGTC	5 cut(s)	182, 589, 965, 1079, 1526
MmeI	TCCRAC	6 cut(s)	262, 298, 427, 1616, 2707, 3192
Mph1103I	ATGCAT	2 cut(s)	1843, 2584
MroXI	GAANNNNTTC	4 cut(s)	2773, 2784, 2999, 3129
MseI	TTAA	9 cut(s)	350, 753, 1058, 1149, 1250, 1890, 1941, 2259, 3096
MslI	CAYNNNNRTG	2 cut(s)	1656, 2054
MspA1I	CMGCKG	4 cut(s)	173, 256, 1145, 2351
MspCI	CTTAAG	1 cut(s)	349
MspI	CCGG	4 cut(s)	75, 217, 584, 1925
MspR9I	CCNGG	8 cut(s)	75, 217, 263, 486, 1066, 2312, 2618, 3207
MunI	CAATTG	1 cut(s)	2070
Mva1269I	GAATGC	1 cut(s)	844
MvaI	CCWGG	6 cut(s)	263, 486, 1066, 2312, 2618, 3207
MvnI	CGCG	1 cut(s)	173
NciI	CCSGG	2 cut(s)	75, 217
NcoI	CCATGG	3 cut(s)	371, 1285, 1651
NdeI	CATATG	1 cut(s)	2605
NlaIV	GGNNCC	6 cut(s)	177, 260, 393, 443, 1917, 2937
NmuCI	GTSAC	2 cut(s)	1704, 2356
NsbI	TGCGCA	1 cut(s)	2243
NsiI	ATGCAT	2 cut(s)	1843, 2584
PaeR7I	CTCGAG	2 cut(s)	1506, 3083
PceI	AGGCCT	1 cut(s)	912
PctI	GAATGC	1 cut(s)	844
PdmI	GAANNNNTTC	4 cut(s)	2773, 2784, 2999, 3129
PfeI	GAWTC	6 cut(s)	334, 1166, 1339, 1757, 2197, 2598
PflMI	CCANNNNNTGG	1 cut(s)	2623
PfoI	TCCNGGA	3 cut(s)	261, 484, 2310
PleI	GAGTC	5 cut(s)	182, 588, 965, 1078, 1525
PpsI	GAGTC	5 cut(s)	182, 588, 965, 1078, 1525
PpuMI	RGGWCCY	2 cut(s)	1382, 1947
Psp124BI	GAGCTC	1 cut(s)	2119
Psp5II	RGGWCCY	2 cut(s)	1382, 1947
Psp6I	CCWGG	6 cut(s)	261, 484, 1064, 2310, 2616, 3205
PspFI	CCCAGC	2 cut(s)	323, 1784
PspGI	CCWGG	6 cut(s)	261, 484, 1064, 2310, 2616, 3205
PspN4I	GGNNCC	6 cut(s)	177, 260, 393, 443, 1917, 2937
PspPI	GGNCC	5 cut(s)	362, 1382, 1927, 1947, 2275
PspPPI	RGGWCCY	2 cut(s)	1382, 1947
PspXI	VCTCGAGB	2 cut(s)	1506, 3083
PstI	CTGCAG	1 cut(s)	2677
PstNI	CAGNNNCTG	3 cut(s)	940, 1240, 1520
PsuI	RGATCY	3 cut(s)	2338, 2834, 2935
RsaI	GTAC	4 cut(s)	166, 2109, 2707, 2796
RsaNI	GTAC	4 cut(s)	165, 2108, 2706, 2795
RseI	CAYNNNNRTG	2 cut(s)	1656, 2054
SacI	GAGCTC	1 cut(s)	2119
SacII	CCGCGG	1 cut(s)	174
SaqAI	TTAA	9 cut(s)	350, 753, 1058, 1149, 1250, 1890, 1941, 2259, 3096
Sau96I	GGNCC	5 cut(s)	362, 1382, 1927, 1947, 2275
ScaI	AGTACT	1 cut(s)	2707
SchI	GAGTC	5 cut(s)	182, 589, 965, 1079, 1526
ScrFI	CCNGG	8 cut(s)	75, 217, 263, 486, 1066, 2312, 2618, 3207
SduI	GDGCHC	6 cut(s)	216, 547, 1006, 1048, 1671, 2119
SfcI	CTRYAG	2 cut(s)	2346, 2673
Sfr274I	CTCGAG	2 cut(s)	1506, 3083
Sfr303I	CCGCGG	1 cut(s)	174
SgrBI	CCGCGG	1 cut(s)	174
SinI	GGWCC	4 cut(s)	362, 1382, 1927, 1947
SlaI	CTCGAG	2 cut(s)	1506, 3083
SmiMI	CAYNNNNRTG	2 cut(s)	1656, 2054
SmlI	CTYRAG	5 cut(s)	38, 349, 1125, 1506, 3083
SmoI	CTYRAG	5 cut(s)	38, 349, 1125, 1506, 3083
SpeI	ACTAGT	1 cut(s)	22
SseBI	AGGCCT	1 cut(s)	912
SspI	AATATT	2 cut(s)	269, 1795
SspMI	CTAG	9 cut(s)	23, 396, 590, 713, 833, 975, 1265, 1572, 1965
SstI	GAGCTC	1 cut(s)	2119
StuI	AGGCCT	1 cut(s)	912
StyD4I	CCNGG	8 cut(s)	73, 215, 261, 484, 1064, 2310, 2616, 3205
StyI	CCWWGG	6 cut(s)	371, 1075, 1285, 1651, 1930, 2278
TaaI	ACNGT	6 cut(s)	151, 645, 1108, 1738, 1822, 2257
TaiI	ACGT	1 cut(s)	1813
TaqI	TCGA	8 cut(s)	879, 1224, 1335, 1378, 1507, 1536, 2920, 3084
TatI	WGTACW	3 cut(s)	2107, 2705, 2794
TauI	GCSGC	3 cut(s)	132, 135, 259
TfiI	GAWTC	6 cut(s)	334, 1166, 1339, 1757, 2197, 2598
Tru1I	TTAA	9 cut(s)	350, 753, 1058, 1149, 1250, 1890, 1941, 2259, 3096
Tru9I	TTAA	9 cut(s)	350, 753, 1058, 1149, 1250, 1890, 1941, 2259, 3096
TscAI	CASTG	2 cut(s)	131, 1046
TseFI	GTSAC	2 cut(s)	1704, 2356
Tsp45I	GTSAC	2 cut(s)	1704, 2356
TspDTI	ATGAA	9 cut(s)	347, 496, 885, 1569, 2037, 2038, 2139, 2160, 2304
TspGWI	ACGGA	9 cut(s)	217, 530, 801, 1074, 1706, 1875, 2173, 2752, 2998
TspRI	CASTG	2 cut(s)	131, 1046
Van91I	CCANNNNNTGG	1 cut(s)	2623
Vha464I	CTTAAG	1 cut(s)	349
VneI	GTGCAC	2 cut(s)	543, 1044
VpaK11BI	GGWCC	4 cut(s)	362, 1382, 1927, 1947
XapI	RAATTY	6 cut(s)	759, 2174, 2181, 2812, 2995, 3129
XbaI	TCTAGA	3 cut(s)	712, 832, 974
XhoI	CTCGAG	2 cut(s)	1506, 3083
XmnI	GAANNNNTTC	4 cut(s)	2773, 2784, 2999, 3129
XspI	CTAG	9 cut(s)	23, 396, 590, 713, 833, 975, 1265, 1572, 1965
ZrmI	AGTACT	1 cut(s)	2707
Zsp2I	ATGCAT	2 cut(s)	1843, 2584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.