isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48200 |
| fragaria_vesca | FvH4_5g05550 FvH4_5g05550 FvH4_5g05550 |
| malus_domestica | MD06G1171200.v1.1 |
| prunus_persica | Prupe.5G170900_v2.0.a1 Prupe.5G170900_v2.0.a1 Prupe.5G170900_v2.0.a1 Prupe.5G170900_v2.0.a1 |
| pyrus_communis | pycom06g15260 |
| rosa_chinensis | RchiOBHm_Chr7g0193221 |
| rosa_laevigata | RLG00000004285 |
| rosa_roxburghii | Rroxscaffold_3G00262270 |
| rosa_rugosa | Rorug07G0008400 |
| rosa_samantha | Rh7AG133900 Rh7BG134900 Rh7CG137900 Rh7DG135900 |
| rosa_wichuraiana | Rw7G011450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1012 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 491 |
| AatII | GACGTC | 1 cut(s) | 1391 |
| Acc16I | TGCGCA | 1 cut(s) | 301 |
| Acc36I | ACCTGC | 1 cut(s) | 1012 |
| Acc65I | GGTACC | 1 cut(s) | 2232 |
| AccB1I | GGYRCC | 1 cut(s) | 2232 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 443, 1136 |
| AccII | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| AccIII | TCCGGA | 1 cut(s) | 3014 |
| AciI | CCGC | 8 cut(s) | 1283, 1400, 1733, 1761, 2742, 2839, 2901, 3141 |
| AclI | AACGTT | 1 cut(s) | 2174 |
| AclWI | GGATC | 5 cut(s) | 1121, 1871, 2420, 2932, 3116 |
| AcoI | YGGCCR | 2 cut(s) | 505, 1650 |
| AcuI | CTGAAG | 4 cut(s) | 126, 1952, 2466, 2645 |
| AcyI | GRCGYC | 1 cut(s) | 1388 |
| AdeI | CACNNNGTG | 2 cut(s) | 947, 1952 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 443, 890, 1136, 1667, 3028 |
| AflII | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| AflIII | ACRYGT | 2 cut(s) | 408, 1816 |
| AgeI | ACCGGT | 2 cut(s) | 820, 1543 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2259 |
| AjnI | CCWGG | 1 cut(s) | 2263 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1806, 1838 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 403 |
| Alw26I | GTCTC | 3 cut(s) | 52, 1042, 1781 |
| Alw44I | GTGCAC | 1 cut(s) | 399 |
| AlwI | GGATC | 5 cut(s) | 1121, 1871, 2420, 2932, 3116 |
| Ama87I | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| Aor13HI | TCCGGA | 1 cut(s) | 3014 |
| AoxI | GGCC | 6 cut(s) | 505, 1650, 1825, 2215, 2275, 3246 |
| ApaLI | GTGCAC | 1 cut(s) | 399 |
| ApeKI | GCWGC | 6 cut(s) | 195, 324, 2039, 2081, 2967, 2970 |
| AseI | ATTAAT | 1 cut(s) | 1710 |
| AsiGI | ACCGGT | 2 cut(s) | 820, 1543 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 187, 253, 1818, 2633, 3010, 3184 |
| Asp718I | GGTACC | 1 cut(s) | 2232 |
| AspLEI | GCGC | 2 cut(s) | 302, 1445 |
| AspS9I | GGNCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| AsuHPI | GGTGA | 6 cut(s) | 619, 884, 973, 1396, 1558, 1750 |
| AsuII | TTCGAA | 1 cut(s) | 2334 |
| AvaI | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| AvaII | GGWCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| AxyI | CCTNAGG | 1 cut(s) | 3222 |
| BaeGI | GKGCMC | 1 cut(s) | 403 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 708, 741, 1919, 1952 |
| BalI | TGGCCA | 2 cut(s) | 507, 1652 |
| BanI | GGYRCC | 1 cut(s) | 2232 |
| BanII | GRGCYC | 1 cut(s) | 96 |
| BauI | CACGAG | 2 cut(s) | 1483, 1531 |
| BbsI | GAAGAC | 2 cut(s) | 513, 1975 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 403 |
| BbvI | GCAGC | 6 cut(s) | 182, 311, 2026, 2068, 2979, 2982 |
| BccI | CCATC | 6 cut(s) | 167, 249, 269, 1109, 1465, 1530 |
| BceAI | ACGGC | 2 cut(s) | 897, 959 |
| BciT130I | CCWGG | 1 cut(s) | 2265 |
| BciVI | GTATCC | 1 cut(s) | 2117 |
| BclI | TGATCA | 1 cut(s) | 2925 |
| BcoDI | GTCTC | 3 cut(s) | 52, 1042, 1781 |
| BfaI | CTAG | 8 cut(s) | 132, 215, 272, 759, 2316, 2954, 3081, 3117 |
| BfmI | CTRYAG | 4 cut(s) | 363, 2082, 2673, 3201 |
| BfrI | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| BfuAI | ACCTGC | 1 cut(s) | 1012 |
| BfuI | GTATCC | 1 cut(s) | 2117 |
| BglII | AGATCT | 1 cut(s) | 2858 |
| BisI | GCNGC | 7 cut(s) | 196, 325, 2040, 2082, 2901, 2968, 2971 |
| BlsI | GCNGC | 7 cut(s) | 197, 326, 2041, 2083, 2902, 2969, 2972 |
| Bme1390I | CCNGG | 1 cut(s) | 2265 |
| Bme18I | GGWCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2259 |
| BmeT110I | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| BmgT120I | GGNCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| BmiI | GGNNCC | 5 cut(s) | 1490, 2048, 2234, 2349, 3114 |
| BmrFI | CCNGG | 1 cut(s) | 2265 |
| BmsI | GCATC | 8 cut(s) | 300, 389, 571, 1016, 1310, 2429, 2431, 2601 |
| BpiI | GAAGAC | 2 cut(s) | 513, 1975 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2654, 2686 |
| Bpu14I | TTCGAA | 1 cut(s) | 2334 |
| BpuEI | CTTGAG | 3 cut(s) | 311, 2378, 2887 |
| BsaBI | GATNNNNATC | 2 cut(s) | 279, 2885 |
| BsaHI | GRCGYC | 1 cut(s) | 1388 |
| BsaI | GGTCTC | 1 cut(s) | 1042 |
| BsaJI | CCNNGG | 7 cut(s) | 868, 1616, 2074, 2257, 2733, 2943, 3047 |
| BsaWI | WCCGGW | 3 cut(s) | 820, 1543, 3014 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 343, 373, 1957, 1987, 3091, 3121, 3139, 3169 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 443, 890, 1136, 1667, 3028 |
| Bse118I | RCCGGY | 2 cut(s) | 820, 1543 |
| Bse1I | ACTGG | 5 cut(s) | 1130, 1236, 2091, 2234, 2327 |
| Bse21I | CCTNAGG | 1 cut(s) | 3222 |
| Bse3DI | GCAATG | 3 cut(s) | 1550, 1770, 2980 |
| Bse8I | GATNNNNATC | 2 cut(s) | 279, 2885 |
| BseAI | TCCGGA | 1 cut(s) | 3014 |
| BseBI | CCWGG | 1 cut(s) | 2265 |
| BseDI | CCNNGG | 7 cut(s) | 868, 1616, 2074, 2257, 2733, 2943, 3047 |
| BseGI | GGATG | 6 cut(s) | 178, 315, 1101, 1282, 1301, 2244 |
| BseJI | GATNNNNATC | 2 cut(s) | 279, 2885 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 443, 890, 1136, 1667, 3028 |
| BseMI | GCAATG | 3 cut(s) | 1550, 1770, 2980 |
| BseMII | CTCAG | 6 cut(s) | 423, 862, 1179, 1187, 1286, 2930 |
| BseNI | ACTGG | 5 cut(s) | 1130, 1236, 2091, 2234, 2327 |
| BseRI | GAGGAG | 4 cut(s) | 465, 1138, 1397, 1978 |
| BseSI | GKGCMC | 1 cut(s) | 403 |
| BseXI | GCAGC | 6 cut(s) | 182, 311, 2026, 2068, 2979, 2982 |
| BsgI | GTGCAG | 2 cut(s) | 788, 1002 |
| Bsh1236I | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2166 |
| BshFI | GGCC | 6 cut(s) | 507, 1652, 1827, 2217, 2277, 3248 |
| BshNI | GGYRCC | 1 cut(s) | 2232 |
| BshTI | ACCGGT | 2 cut(s) | 820, 1543 |
| BsiEI | CGRYCG | 1 cut(s) | 2166 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 403 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| BsiSI | CCGG | 3 cut(s) | 821, 1544, 3015 |
| BslFI | GGGAC | 3 cut(s) | 1012, 1416, 3240 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 443, 890, 1136, 1667, 3028 |
| BsmAI | GTCTC | 3 cut(s) | 52, 1042, 1781 |
| BsmFI | GGGAC | 3 cut(s) | 1012, 1416, 3240 |
| BsmI | GAATGC | 1 cut(s) | 1445 |
| BsnI | GGCC | 6 cut(s) | 507, 1652, 1827, 2217, 2277, 3248 |
| Bso31I | GGTCTC | 1 cut(s) | 1042 |
| BsoBI | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| Bsp119I | TTCGAA | 1 cut(s) | 2334 |
| Bsp1286I | GDGCHC | 2 cut(s) | 96, 403 |
| Bsp13I | TCCGGA | 1 cut(s) | 3014 |
| Bsp1407I | TGTACA | 1 cut(s) | 2823 |
| Bsp19I | CCATGG | 2 cut(s) | 1616, 3047 |
| BspACI | CCGC | 8 cut(s) | 1283, 1400, 1733, 1761, 2742, 2839, 2901, 3141 |
| BspANI | GGCC | 6 cut(s) | 507, 1652, 1827, 2217, 2277, 3248 |
| BspCNI | CTCAG | 6 cut(s) | 424, 861, 1178, 1188, 1285, 2929 |
| BspEI | TCCGGA | 1 cut(s) | 3014 |
| BspFNI | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| BspHI | TCATGA | 1 cut(s) | 1122 |
| BspLI | GGNNCC | 5 cut(s) | 1490, 2048, 2234, 2349, 3114 |
| BspMAI | CTGCAG | 2 cut(s) | 2086, 3205 |
| BspMI | ACCTGC | 1 cut(s) | 1012 |
| BspPI | GGATC | 5 cut(s) | 1121, 1871, 2420, 2932, 3116 |
| BspQI | GCTCTTC | 1 cut(s) | 3190 |
| BspT104I | TTCGAA | 1 cut(s) | 2334 |
| BspT107I | GGYRCC | 1 cut(s) | 2232 |
| BspTI | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| BspTNI | GGTCTC | 1 cut(s) | 1042 |
| BsrDI | GCAATG | 3 cut(s) | 1550, 1770, 2980 |
| BsrFI | RCCGGY | 2 cut(s) | 820, 1543 |
| BsrGI | TGTACA | 1 cut(s) | 2823 |
| BsrI | ACTGG | 5 cut(s) | 1130, 1236, 2091, 2234, 2327 |
| BssAI | RCCGGY | 2 cut(s) | 820, 1543 |
| BssECI | CCNNGG | 7 cut(s) | 868, 1616, 2074, 2257, 2733, 2943, 3047 |
| BssNI | GRCGYC | 1 cut(s) | 1388 |
| BssSI | CACGAG | 2 cut(s) | 1483, 1531 |
| BssT1I | CCWWGG | 5 cut(s) | 868, 1616, 2074, 2257, 3047 |
| Bst2BI | CACGAG | 2 cut(s) | 1483, 1531 |
| Bst2UI | CCWGG | 1 cut(s) | 2265 |
| Bst6I | CTCTTC | 5 cut(s) | 55, 1955, 2159, 2507, 3190 |
| BstACI | GRCGYC | 1 cut(s) | 1388 |
| BstAFI | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| BstAUI | TGTACA | 1 cut(s) | 2823 |
| BstBI | TTCGAA | 1 cut(s) | 2334 |
| BstC8I | GCNNGC | 5 cut(s) | 212, 505, 771, 948, 2740 |
| BstDSI | CCRYGG | 3 cut(s) | 1616, 2943, 3047 |
| BstEII | GGTNACC | 1 cut(s) | 961 |
| BstF5I | GGATG | 6 cut(s) | 178, 315, 1101, 1282, 1301, 2244 |
| BstFNI | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| BstHHI | GCGC | 2 cut(s) | 302, 1445 |
| BstMAI | GTCTC | 3 cut(s) | 52, 1042, 1781 |
| BstMCI | CGRYCG | 1 cut(s) | 2166 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 31, 2087, 2979, 3033, 3147, 3254 |
| BstNI | CCWGG | 1 cut(s) | 2265 |
| BstNSI | RCATGY | 2 cut(s) | 2365, 2682 |
| BstPI | GGTNACC | 1 cut(s) | 961 |
| BstSCI | CCNGG | 1 cut(s) | 2263 |
| BstSFI | CTRYAG | 4 cut(s) | 363, 2082, 2673, 3201 |
| BstSLI | GKGCMC | 1 cut(s) | 403 |
| BstUI | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| BstV1I | GCAGC | 6 cut(s) | 182, 311, 2026, 2068, 2979, 2982 |
| BstV2I | GAAGAC | 2 cut(s) | 513, 1975 |
| BstX2I | RGATCY | 2 cut(s) | 2858, 2937 |
| BstYI | RGATCY | 2 cut(s) | 2858, 2937 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3222 |
| BsuI | GTATCC | 1 cut(s) | 2117 |
| BsuRI | GGCC | 6 cut(s) | 507, 1652, 1827, 2217, 2277, 3248 |
| BtgI | CCRYGG | 3 cut(s) | 1616, 2943, 3047 |
| BtgZI | GCGATG | 1 cut(s) | 2401 |
| BtsCI | GGATG | 6 cut(s) | 178, 315, 1101, 1282, 1301, 2244 |
| BtsI | GCAGTG | 1 cut(s) | 557 |
| BtsIMutI | CAGTG | 7 cut(s) | 557, 1137, 1595, 1848, 1957, 2098, 2227 |
| BveI | ACCTGC | 1 cut(s) | 1012 |
| Cac8I | GCNNGC | 5 cut(s) | 212, 505, 771, 948, 2740 |
| CciI | TCATGA | 1 cut(s) | 1122 |
| CfoI | GCGC | 2 cut(s) | 302, 1445 |
| Cfr10I | RCCGGY | 2 cut(s) | 820, 1543 |
| Cfr13I | GGNCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| CspAI | ACCGGT | 2 cut(s) | 820, 1543 |
| DraI | TTTAAA | 2 cut(s) | 652, 2068 |
| DraIII | CACNNNGTG | 2 cut(s) | 947, 1952 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 491 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2259 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 491 |
| EaeI | YGGCCR | 2 cut(s) | 505, 1650 |
| Eam1104I | CTCTTC | 5 cut(s) | 55, 1955, 2159, 2507, 3190 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2259 |
| EarI | CTCTTC | 5 cut(s) | 55, 1955, 2159, 2507, 3190 |
| Ecl136II | GAGCTC | 1 cut(s) | 94 |
| Eco130I | CCWWGG | 5 cut(s) | 868, 1616, 2074, 2257, 3047 |
| Eco24I | GRGCYC | 1 cut(s) | 96 |
| Eco31I | GGTCTC | 1 cut(s) | 1042 |
| Eco32I | GATATC | 3 cut(s) | 1175, 1344, 1473 |
| Eco47I | GGWCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| Eco53kI | GAGCTC | 1 cut(s) | 94 |
| Eco57I | CTGAAG | 4 cut(s) | 126, 1952, 2466, 2645 |
| Eco81I | CCTNAGG | 1 cut(s) | 3222 |
| Eco88I | CYCGRG | 3 cut(s) | 2732, 2753, 3028 |
| Eco91I | GGTNACC | 1 cut(s) | 961 |
| EcoICRI | GAGCTC | 1 cut(s) | 94 |
| EcoO65I | GGTNACC | 1 cut(s) | 961 |
| EcoRI | GAATTC | 4 cut(s) | 475, 829, 976, 2993 |
| EcoRII | CCWGG | 1 cut(s) | 2263 |
| EcoRV | GATATC | 3 cut(s) | 1175, 1344, 1473 |
| EcoT14I | CCWWGG | 5 cut(s) | 868, 1616, 2074, 2257, 3047 |
| EcoT22I | ATGCAT | 1 cut(s) | 315 |
| EcoT38I | GRGCYC | 1 cut(s) | 96 |
| ErhI | CCWWGG | 5 cut(s) | 868, 1616, 2074, 2257, 3047 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3068, 3100 |
| FaqI | GGGAC | 3 cut(s) | 1012, 1416, 3240 |
| FauI | CCCGC | 2 cut(s) | 1276, 1393 |
| FbaI | TGATCA | 1 cut(s) | 2925 |
| Fnu4HI | GCNGC | 7 cut(s) | 196, 325, 2040, 2082, 2901, 2968, 2971 |
| FokI | GGATG | 6 cut(s) | 185, 322, 1088, 1288, 1289, 2231 |
| FriOI | GRGCYC | 1 cut(s) | 96 |
| Fsp4HI | GCNGC | 7 cut(s) | 196, 325, 2040, 2082, 2901, 2968, 2971 |
| FspBI | CTAG | 8 cut(s) | 132, 215, 272, 759, 2316, 2954, 3081, 3117 |
| FspI | TGCGCA | 1 cut(s) | 301 |
| GlaI | GCGC | 2 cut(s) | 301, 1444 |
| GluI | GCNGC | 7 cut(s) | 196, 325, 2040, 2082, 2901, 2968, 2971 |
| HaeIII | GGCC | 6 cut(s) | 507, 1652, 1827, 2217, 2277, 3248 |
| HapII | CCGG | 3 cut(s) | 821, 1544, 3015 |
| HhaI | GCGC | 2 cut(s) | 302, 1445 |
| Hin1I | GRCGYC | 1 cut(s) | 1388 |
| Hin6I | GCGC | 2 cut(s) | 300, 1443 |
| HinP1I | GCGC | 2 cut(s) | 300, 1443 |
| HpaII | CCGG | 3 cut(s) | 821, 1544, 3015 |
| HphI | GGTGA | 6 cut(s) | 619, 884, 973, 1396, 1558, 1750 |
| Hpy166II | GTNNAC | 5 cut(s) | 401, 802, 1241, 1673, 2351 |
| Hpy8I | GTNNAC | 5 cut(s) | 401, 802, 1241, 1673, 2351 |
| Hpy99I | CGWCG | 1 cut(s) | 893 |
| HpyAV | CCTTC | 7 cut(s) | 497, 588, 1690, 2034, 2207, 2627, 3135 |
| HpyCH4IV | ACGT | 4 cut(s) | 408, 1388, 1818, 2174 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 31, 2087, 2979, 3033, 3147, 3254 |
| HpySE526I | ACGT | 4 cut(s) | 408, 1388, 1818, 2174 |
| Hsp92I | GRCGYC | 1 cut(s) | 1388 |
| HspAI | GCGC | 2 cut(s) | 300, 1443 |
| Kpn2I | TCCGGA | 1 cut(s) | 3014 |
| KpnI | GGTACC | 1 cut(s) | 2236 |
| Ksp22I | TGATCA | 1 cut(s) | 2925 |
| LguI | GCTCTTC | 1 cut(s) | 3190 |
| LmnI | GCTCC | 5 cut(s) | 2046, 2078, 2455, 3099, 3147 |
| Lsp1109I | GCAGC | 6 cut(s) | 182, 311, 2026, 2068, 2979, 2982 |
| LweI | GCATC | 8 cut(s) | 300, 389, 571, 1016, 1310, 2429, 2431, 2601 |
| MaeI | CTAG | 8 cut(s) | 132, 215, 272, 759, 2316, 2954, 3081, 3117 |
| MaeII | ACGT | 4 cut(s) | 408, 1388, 1818, 2174 |
| MflI | RGATCY | 2 cut(s) | 2858, 2937 |
| MhlI | GDGCHC | 2 cut(s) | 96, 403 |
| MlsI | TGGCCA | 2 cut(s) | 507, 1652 |
| MluNI | TGGCCA | 2 cut(s) | 507, 1652 |
| MlyI | GAGTC | 3 cut(s) | 965, 1398, 1745 |
| MmeI | TCCRAC | 2 cut(s) | 1037, 3125 |
| Mox20I | TGGCCA | 2 cut(s) | 507, 1652 |
| Mph1103I | ATGCAT | 1 cut(s) | 315 |
| MroI | TCCGGA | 1 cut(s) | 3014 |
| MroXI | GAANNNNTTC | 6 cut(s) | 187, 253, 1818, 2633, 3010, 3184 |
| MscI | TGGCCA | 2 cut(s) | 507, 1652 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1763, 2249 |
| Msp20I | TGGCCA | 2 cut(s) | 507, 1652 |
| MspA1I | CMGCKG | 1 cut(s) | 2608 |
| MspCI | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| MspI | CCGG | 3 cut(s) | 821, 1544, 3015 |
| MspR9I | CCNGG | 1 cut(s) | 2265 |
| Mva1269I | GAATGC | 1 cut(s) | 1445 |
| MvaI | CCWGG | 1 cut(s) | 2265 |
| MvnI | CGCG | 5 cut(s) | 670, 920, 1283, 1733, 2903 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 31, 2087, 2979, 3033, 3147, 3254 |
| NcoI | CCATGG | 2 cut(s) | 1616, 3047 |
| NlaIV | GGNNCC | 5 cut(s) | 1490, 2048, 2234, 2349, 3114 |
| NmuCI | GTSAC | 8 cut(s) | 373, 928, 955, 961, 1384, 1508, 1546, 2251 |
| NsbI | TGCGCA | 1 cut(s) | 301 |
| NsiI | ATGCAT | 1 cut(s) | 315 |
| NspI | RCATGY | 2 cut(s) | 2365, 2682 |
| NspV | TTCGAA | 1 cut(s) | 2334 |
| PagI | TCATGA | 1 cut(s) | 1122 |
| PaqCI | CACCTGC | 1 cut(s) | 1012 |
| PciSI | GCTCTTC | 1 cut(s) | 3190 |
| PctI | GAATGC | 1 cut(s) | 1445 |
| PdmI | GAANNNNTTC | 6 cut(s) | 187, 253, 1818, 2633, 3010, 3184 |
| PfeI | GAWTC | 9 cut(s) | 456, 907, 1255, 1585, 1992, 2203, 2475, 2787, 3194 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 443, 1136 |
| PinAI | ACCGGT | 2 cut(s) | 820, 1543 |
| PkrI | GCNGC | 7 cut(s) | 197, 326, 2041, 2083, 2902, 2969, 2972 |
| PleI | GAGTC | 3 cut(s) | 965, 1398, 1744 |
| PpsI | GAGTC | 3 cut(s) | 965, 1398, 1744 |
| PshBI | ATTAAT | 1 cut(s) | 1710 |
| Psp124BI | GAGCTC | 1 cut(s) | 96 |
| Psp1406I | AACGTT | 1 cut(s) | 2174 |
| Psp6I | CCWGG | 1 cut(s) | 2263 |
| PspEI | GGTNACC | 1 cut(s) | 961 |
| PspGI | CCWGG | 1 cut(s) | 2263 |
| PspN4I | GGNNCC | 5 cut(s) | 1490, 2048, 2234, 2349, 3114 |
| PspPI | GGNCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| PstI | CTGCAG | 2 cut(s) | 2086, 3205 |
| PsuI | RGATCY | 2 cut(s) | 2858, 2937 |
| PvuII | CAGCTG | 1 cut(s) | 2608 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1763, 2249 |
| SacI | GAGCTC | 1 cut(s) | 96 |
| SapI | GCTCTTC | 1 cut(s) | 3190 |
| SatI | GCNGC | 7 cut(s) | 196, 325, 2040, 2082, 2901, 2968, 2971 |
| Sau96I | GGNCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| SchI | GAGTC | 3 cut(s) | 965, 1398, 1745 |
| ScrFI | CCNGG | 1 cut(s) | 2265 |
| SduI | GDGCHC | 2 cut(s) | 96, 403 |
| SfaNI | GCATC | 8 cut(s) | 300, 389, 571, 1016, 1310, 2429, 2431, 2601 |
| SfcI | CTRYAG | 4 cut(s) | 363, 2082, 2673, 3201 |
| SfuI | TTCGAA | 1 cut(s) | 2334 |
| SinI | GGWCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1763, 2249 |
| SmlI | CTYRAG | 7 cut(s) | 290, 740, 1715, 1799, 2393, 2866, 2876 |
| SmoI | CTYRAG | 7 cut(s) | 290, 740, 1715, 1799, 2393, 2866, 2876 |
| SsiI | CCGC | 8 cut(s) | 1283, 1400, 1733, 1761, 2742, 2839, 2901, 3141 |
| SspI | AATATT | 1 cut(s) | 421 |
| SspMI | CTAG | 8 cut(s) | 132, 215, 272, 759, 2316, 2954, 3081, 3117 |
| SstI | GAGCTC | 1 cut(s) | 96 |
| StyD4I | CCNGG | 1 cut(s) | 2263 |
| StyI | CCWWGG | 5 cut(s) | 868, 1616, 2074, 2257, 3047 |
| TaiI | ACGT | 4 cut(s) | 411, 1391, 1821, 2177 |
| TaqI | TCGA | 6 cut(s) | 263, 888, 974, 1995, 2334, 2502 |
| TaqII | GACCGA | 1 cut(s) | 2152 |
| TatI | WGTACW | 4 cut(s) | 1238, 1770, 2358, 2823 |
| TauI | GCSGC | 1 cut(s) | 2903 |
| TfiI | GAWTC | 9 cut(s) | 456, 907, 1255, 1585, 1992, 2203, 2475, 2787, 3194 |
| TscAI | CASTG | 7 cut(s) | 564, 1137, 1595, 1848, 1957, 2098, 2234 |
| TseFI | GTSAC | 8 cut(s) | 373, 928, 955, 961, 1384, 1508, 1546, 2251 |
| TseI | GCWGC | 6 cut(s) | 195, 324, 2039, 2081, 2967, 2970 |
| Tsp45I | GTSAC | 8 cut(s) | 373, 928, 955, 961, 1384, 1508, 1546, 2251 |
| TspGWI | ACGGA | 2 cut(s) | 194, 906 |
| TspRI | CASTG | 7 cut(s) | 564, 1137, 1595, 1848, 1957, 2098, 2234 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 443, 1136 |
| Vha464I | CTTAAG | 4 cut(s) | 740, 1715, 1799, 2876 |
| VneI | GTGCAC | 1 cut(s) | 399 |
| VpaK11BI | GGWCC | 4 cut(s) | 1670, 2261, 2324, 2348 |
| VspI | ATTAAT | 1 cut(s) | 1710 |
| XbaI | TCTAGA | 1 cut(s) | 131 |
| XceI | RCATGY | 2 cut(s) | 2365, 2682 |
| XmnI | GAANNNNTTC | 6 cut(s) | 187, 253, 1818, 2633, 3010, 3184 |
| XspI | CTAG | 8 cut(s) | 132, 215, 272, 759, 2316, 2954, 3081, 3117 |
| ZraI | GACGTC | 1 cut(s) | 1389 |
| Zsp2I | ATGCAT | 1 cut(s) | 315 |