Prupe.5G170900_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
14615403 .. 14621545
6143 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G170900.1

Sequence Viewer

Length: 3282 bp
ATGGGTTTGCTTCATACTTCATGGGCTGTTTTGCTTCTTTGGGTTTTTCCACTATTGCTTTTGAAAGCACACTCTGATGGTTCAGAGGTCTCTGTTAAGTTCTTTAAGGCTCCACATGCATTCTCTCATCTGAACTCAGCCACATTTGCATTTGAAGCTTTGGTTGGTGGGAATGCGGCCTCCTGCACAAATTGTAGCTTCAGTTGTAAGCTGGATGATGGGATGGGTTCAAATTGTGGAACTAGAAAGGTTTCCTACTCAGGGTTGCAGGATGGAAATCATACCTTTGAGGTCTGCACCAATGGGCCTCAAGGAATTGGTTGTGCTTTGCATAACTGGACTGTTGACACAGTACCCCCAACCGCATCTGTTACTGCCTCTAGATCTTTTACGGATGCTTTAAATGTTTCTGTTAATATTTCTTTCAGTGAATCCTGTTCCGGTGGAGGAGGCTTTGGATGTTTGTCTGCGAACACCTGCAATCTGCTAGTATATGGTGCTGGCCAAGTGATCCCATCTTCACTCAGTATTCTTCAGCCAAACCTCAAATATTCCCTTCTTGTGGGCTTATCATCTTCTGTTCAATATGGACGAGTGGTCCTGGTAATGGATAAGAATTTCTGCACTGATATTGCTGGAAACAGATTTGTAAGAACAGAAAACTCAAGATTCTATGTACGCATTGATAGAAGAAACGTGTTCGTCAACCTGAGAATTCATATTCCTGAGAGGCTACTTCAGCTTAATGGTGAAACTAGAACAGTGCAGGCAACTAACAATTATAATAACCTAAAGATTTATGTGTACTTCTCAGAACCTGTTCTGAATTCATCTGCACAAATTTTAAATTCTCTCAACATAAGTCAGGGATCACTTCTCCCTGCTAGCGGAAATAACACTGGGAATCGCAGATTTGGCTTTGTGGTTGCAAACATGTCTAGCATTGCTATCATCACAGTGAGCCTCAATTCAAACTTGATAATAAGTAGACAAGGGACTCCAGTTTCTCCAATCTCACCAGCAACTTTCCTATTTGATTCAAAAAGGCCTACTGTGAAGTTGAGCACAACCTCAAGTATGAGAACAAGAGAACACAATATTCCCATATTAATAAAATTCATGAAGCCTGTATTTGGCTTCAACTCTTCCTCTTTATCACTATCTGGTGGGCGCTTACAAAGTTTTCACGAAATAAGTAGGAGCACATATGTTGTCGAAATAGAAGCAGTTGACGATATGGTTTCTGTCAATGTTCCTGAAAACATATCTGGGGATGTTGCTGGAAACAAAAATCTAGCTTCAAATATTCTTCGTGTGACACACTATTCAGTGCCTTTGATAGCTTCTGTCATATCTGCATTTGCTACTGCTCTTTTTGTGGTGACATCCCTAGCTGCGGGGCTGCTTTCTATTTCAACTGCAAGCCTTCAATCTCTTTGGTCATTTAGCAGACCATCTTCTTTGGCATCTGATCCAGCAAGAAATCTTTTTAGAATTGCTTGTCATATTCAAGTTTTTGCACTCTCTAGATGGTTGGCAGTTACATTGCCAGTTAATTATTATGAACTAGTAAGGGGTTTACGGTGGAGTATTCCCTACTTTAGTCTCCCATGGGAAGCTGGGAATGGCTTCCCAGTCTCTAGTCCTTTCACCAGTTCAAGTTCCTACATGACCGAGAATCATGGTTCCGAAGTTTTCCAAAGCAAGCAACTCGAAAAAGAGATTTTCAGTAAGGATACTTCACTATATGGGTTACCACTTACTCCAACGGAATACAGAACCTTTTTTGAGTTGGACAGTGAAAACATCAAACCTGAAGCTGACTATATCTCCAATCCTTATAGCTCGAATAGTAGGTGGAGGAATTTCGACAGGACCATGTTCTGGTTAGCTGTGATTTGTGGTACTTTGATTCTGTTACATGTTTTAGTCCTTTTTATCCTGAAAATGAGGAAGAAGAATTCAGAGAAGCAGAGCTCTTACGGAGCACTCACATTCCCCAGATTTGAAATATTTCTTGTAATACTTGCATTGCCTTGTATCTATGAGGCCTCTGCTGCTCTAGTTAGAGGAGGAATGCCATCTGGGGTTATAGTTGGCAGTTCGTTGTTGGTTATCACCTCTTTTCTGCTGCTAGCCTTGCTCTTTTTCCTCTCAGTTGGCATTACGTTTGGAAAGCTCCTTCAATACAAGGAAGTGCATCGAGAAGGCCTGGAATTTCACTGGTATCAAGAGCTTGTCCGGGTGACCCTCGGTCCAGGCAAAAGAGGCCAGTGGACATGGAAAGGTCAACCAAACTCTGTTTATCTAATCATTTTTGGCCCTCTGTTTGAAGACCTAAGAGGCCCCCCAAAGTACATGCTCTCTCAGATTTCTGGGGGCAATCCCCAGAAGCATGGTGAAAGTATCATTGCCTCCGATGATGAAACAGAAGATGCAGAAGCACCCTTTATCCAAAAGGTGTTTGGAATACTCAGAATATACTACACACTGCTAGAGTGTTTGAAAAGGGTTGCGGTTGGGGTTATGGCTGGTGTCTACATGGACAAATGGTCTTCTAAAACTCCCTCAGTTGCCTTATTGTGCATCACCTCTTTTCAGCTTTTCTTCCTTGTTCTCAAGAAGCCTTTTATCAAGAAAAAGGTTCAGCTGGTTGAGATCATCTCCATTTCCAGTGAAGTAGGTTTATTTGCAACTTGCGTGGTTCTCTTGGAGAAGGAATTTTCAGCCGGCGACAAGACTAAAGTTGGAATTTTCATGCTATTTCTGTTCCTAGTTGGATATGTAGCACAGATGATCAATGAATGGTATGCATTGTACAAACAAACATTGCTACTGGACTCTGCTGAGAAATCCTTCTTAACAGGTTTGAAATTAGCTTCAATCGGATGCCTCTTGTTAATCATCCCACAGAGATTGATCAAGACCCTGGAAAAAAAGTTCCAAGTGGAAAGCAAGTTCCAAGTGACTCAAAACGCAGAAGGAGCAACAAGGGATCCTAGTTCTTCCACCGGTGGGTACCGGGGCTCCGGGAATCGGAGCTTAGCTGGCACAGATAAACCGTGGCTAAAGCAACTAAGAGAGCTGGCAAAGTCCAGTTTTAGTAAAGAAGGGAGTGGAGTTACAAATGATCCTTCAAGTAGTCACACTCGTCCTAGATGGAGTGGTATTTGGAGCGCCAAGAGGAGTGGTAGCTCTTCAACTCCAAATTCTTCTGTTGATTTCAAATCAAAACCAACAGGGTTGTACAAAGATTTAGAGGCCATTTTTGCATCGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1094

Amino Acids

120.27

Weight (kDa)

9.25

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012246)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AarI CACCTGC 1 cut(s) 485
Acc36I ACCTGC 1 cut(s) 485
Acc65I GGTACC 1 cut(s) 3018
AccB1I GGYRCC 1 cut(s) 3018
AccB7I CCANNNNNTGG 1 cut(s) 1884
AccI GTMKAC 2 cut(s) 988, 2538
AciI CCGC 5 cut(s) 176, 363, 888, 1397, 2516
AclWI GGATC 6 cut(s) 505, 877, 1466, 2990, 3003, 3125
AcoI YGGCCR 1 cut(s) 502
AcuI CTGAAG 4 cut(s) 184, 518, 722, 1836
AfaI GTAC 8 cut(s) 354, 678, 806, 1906, 2357, 2819, 3020, 3248
AfiI CCNNNNNNNGG 9 cut(s) 261, 562, 607, 887, 1133, 1396, 1884, 3015, 3036
AflIII ACRYGT 3 cut(s) 696, 933, 1921
AgeI ACCGGT 1 cut(s) 3011
AhdI GACNNNNNGTC 3 cut(s) 596, 2253, 2551
AhlI ACTAGT 1 cut(s) 1567
AjnI CCWGG 4 cut(s) 600, 2211, 2257, 2928
AjuI GAANNNNNNNTTGG 2 cut(s) 147, 179
AloI GAACNNNNNNTCC 4 cut(s) 2924, 2942, 2956, 2974
Alw21I GWGCWC 4 cut(s) 1067, 1205, 1979, 1990
Alw26I GTCTC 3 cut(s) 94, 1610, 1642
AlwI GGATC 6 cut(s) 505, 877, 1466, 2990, 3003, 3125
AlwNI CAGNNNCTG 1 cut(s) 818
ApeKI GCWGC 4 cut(s) 1394, 1402, 2057, 2131
AseI ATTAAT 1 cut(s) 1109
AsiGI ACCGGT 1 cut(s) 3011
Asp700I GAANNNNTTC 5 cut(s) 250, 819, 1628, 2013, 2855
Asp718I GGTACC 1 cut(s) 3018
AspLEI GCGC 2 cut(s) 1173, 3179
AspS9I GGNCC 6 cut(s) 305, 598, 1875, 2255, 2321, 2345
AsuC2I CCSGG 3 cut(s) 2243, 3023, 3031
AsuHPI GGTGA 8 cut(s) 761, 1008, 1393, 1642, 2110, 2257, 2411, 2581
AsuNHI GCTAGC 2 cut(s) 884, 2134
AvaII GGWCC 3 cut(s) 598, 1875, 2255
BalI TGGCCA 1 cut(s) 504
BamHI GGATCC 1 cut(s) 2995
BanI GGYRCC 1 cut(s) 3018
BanII GRGCYC 2 cut(s) 1979, 3029
BarI GAAGNNNNNNTAC 2 cut(s) 1723, 1755
BbsI GAAGAC 2 cut(s) 2340, 2547
Bbv12I GWGCWC 4 cut(s) 1067, 1205, 1979, 1990
BbvI GCAGC 4 cut(s) 1381, 1389, 2044, 2118
BccI CCATC 9 cut(s) 71, 212, 217, 266, 523, 1462, 1524, 2089, 3153
BcgI CGANNNNNNTGC 2 cut(s) 1693, 1727
BciT130I CCWGG 4 cut(s) 602, 2213, 2259, 2930
BciVI GTATCC 1 cut(s) 1729
BclI TGATCA 2 cut(s) 2796, 2919
BcnI CCSGG 3 cut(s) 2243, 3023, 3031
BcoDI GTCTC 3 cut(s) 94, 1610, 1642
BcuI ACTAGT 1 cut(s) 1567
BfoI RGCGCY 2 cut(s) 1174, 3180
BfuAI ACCTGC 1 cut(s) 485
BfuI GTATCC 1 cut(s) 1729
BglII AGATCT 1 cut(s) 383
BisI GCNGC 5 cut(s) 177, 1395, 1403, 2058, 2132
BlpI GCTNAGC 1 cut(s) 3043
BlsI GCNGC 5 cut(s) 178, 1396, 1404, 2059, 2133
Bme1390I CCNGG 7 cut(s) 602, 2213, 2243, 2259, 2930, 3023, 3031
Bme18I GGWCC 3 cut(s) 598, 1875, 2255
BmeRI GACNNNNNGTC 3 cut(s) 596, 2253, 2551
BmgT120I GGNCC 6 cut(s) 305, 598, 1875, 2255, 2321, 2345
BmiI GGNNCC 6 cut(s) 111, 1687, 2347, 2997, 3020, 3028
BmrFI CCNGG 7 cut(s) 602, 2213, 2243, 2259, 2930, 3023, 3031
BmrI ACTGGG 2 cut(s) 909, 1628
BmsI GCATC 7 cut(s) 374, 385, 1475, 2209, 2425, 2595, 2879
BmtI GCTAGC 2 cut(s) 888, 2138
BmuI ACTGGG 2 cut(s) 909, 1628
BpiI GAAGAC 2 cut(s) 2340, 2547
BplI GAGNNNNNCTC 2 cut(s) 2648, 2680
BpmI CTGGAG 1 cut(s) 984
Bpu1102I GCTNAGC 1 cut(s) 3043
BpuEI CTTGAG 4 cut(s) 294, 649, 1057, 2603
BpuMI CCSGG 3 cut(s) 2243, 3023, 3031
BsaBI GATNNNNATC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 94
BsaJI CCNNGG 5 cut(s) 1610, 2251, 2928, 3022, 3062
BsaWI WCCGGW 2 cut(s) 440, 3011
BsaXI ACNNNNNCTCC 4 cut(s) 1814, 1844, 3011, 3041
Bsc4I CCNNNNNNNGG 9 cut(s) 261, 562, 607, 887, 1133, 1396, 1884, 3015, 3036
Bse118I RCCGGY 2 cut(s) 2729, 3011
Bse3DI GCAATG 5 cut(s) 942, 1544, 2030, 2409, 2828
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 4 cut(s) 602, 2213, 2259, 2930
BseDI CCNNGG 5 cut(s) 1610, 2251, 2928, 3022, 3062
BseGI GGATG 9 cut(s) 220, 228, 277, 400, 464, 1279, 1385, 2894, 2904
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 9 cut(s) 261, 562, 607, 887, 1133, 1396, 1884, 3015, 3036
BseMI GCAATG 5 cut(s) 942, 1544, 2030, 2409, 2828
BseRI GAGGAG 3 cut(s) 462, 2085, 3199
BseXI GCAGC 4 cut(s) 1381, 1389, 2044, 2118
BseYI CCCAGC 1 cut(s) 1619
BsgI GTGCAG 5 cut(s) 169, 280, 607, 785, 819
BshNI GGYRCC 1 cut(s) 3018
BshTI ACCGGT 1 cut(s) 3011
BsiHKAI GWGCWC 4 cut(s) 1067, 1205, 1979, 1990
BsiSI CCGG 6 cut(s) 441, 2242, 2730, 3012, 3022, 3030
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 9 cut(s) 261, 562, 607, 887, 1133, 1396, 1884, 3015, 3036
BsmAI GTCTC 3 cut(s) 94, 1610, 1642
BsmFI GGGAC 1 cut(s) 1009
BsmI GAATGC 3 cut(s) 119, 178, 2082
Bso31I GGTCTC 1 cut(s) 94
Bsp1286I GDGCHC 5 cut(s) 1067, 1205, 1979, 1990, 3029
Bsp1407I TGTACA 2 cut(s) 2817, 3246
Bsp143I GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
Bsp1720I GCTNAGC 1 cut(s) 3043
Bsp19I CCATGG 1 cut(s) 1610
BspACI CCGC 5 cut(s) 176, 363, 888, 1397, 2516
BspHI TCATGA 1 cut(s) 1119
BspLI GGNNCC 6 cut(s) 111, 1687, 2347, 2997, 3020, 3028
BspMI ACCTGC 1 cut(s) 485
BspOI GCTAGC 2 cut(s) 888, 2138
BspPI GGATC 6 cut(s) 505, 877, 1466, 2990, 3003, 3125
BspQI GCTCTTC 1 cut(s) 3202
BspT107I GGYRCC 1 cut(s) 3018
BspTNI GGTCTC 1 cut(s) 94
BsrDI GCAATG 5 cut(s) 942, 1544, 2030, 2409, 2828
BsrFI RCCGGY 2 cut(s) 2729, 3011
BsrGI TGTACA 2 cut(s) 2817, 3246
BssAI RCCGGY 2 cut(s) 2729, 3011
BssECI CCNNGG 5 cut(s) 1610, 2251, 2928, 3022, 3062
BssMI GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
BssT1I CCWWGG 1 cut(s) 1610
Bst2UI CCWGG 4 cut(s) 602, 2213, 2259, 2930
Bst4CI ACNGT 8 cut(s) 343, 352, 763, 958, 1054, 1584, 1799, 3063
Bst6I CTCTTC 2 cut(s) 1150, 3202
BstAUI TGTACA 2 cut(s) 2817, 3246
BstC8I GCNNGC 9 cut(s) 502, 768, 886, 1423, 1706, 2136, 2731, 3049, 3087
BstDSI CCRYGG 2 cut(s) 1610, 3062
BstEII GGTNACC 2 cut(s) 1752, 2245
BstF5I GGATG 9 cut(s) 220, 228, 277, 400, 464, 1279, 1385, 2894, 2904
BstH2I RGCGCY 2 cut(s) 1174, 3180
BstHHI GCGC 2 cut(s) 1173, 3179
BstKTI GATC 9 cut(s) 386, 513, 872, 1474, 2661, 2799, 2922, 2998, 3133
BstMAI GTCTC 3 cut(s) 94, 1610, 1642
BstMBI GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
BstNI CCWGG 4 cut(s) 602, 2213, 2259, 2930
BstNSI RCATGY 4 cut(s) 119, 937, 1925, 2362
BstPI GGTNACC 2 cut(s) 1752, 2245
BstSCI CCNGG 7 cut(s) 600, 2211, 2241, 2257, 2928, 3021, 3029
BstV1I GCAGC 4 cut(s) 1381, 1389, 2044, 2118
BstV2I GAAGAC 2 cut(s) 2340, 2547
BstX2I RGATCY 2 cut(s) 383, 2995
BstXI CCANNNNNNTGG 1 cut(s) 2396
BstYI RGATCY 2 cut(s) 383, 2995
BsuI GTATCC 1 cut(s) 1729
BtgI CCRYGG 2 cut(s) 1610, 3062
BtsCI GGATG 9 cut(s) 220, 228, 277, 400, 464, 1279, 1385, 2894, 2904
BtsI GCAGTG 1 cut(s) 2489
BveI ACCTGC 1 cut(s) 485
Cac8I GCNNGC 9 cut(s) 502, 768, 886, 1423, 1706, 2136, 2731, 3049, 3087
CaiI CAGNNNCTG 1 cut(s) 818
CciI TCATGA 1 cut(s) 1119
CfoI GCGC 2 cut(s) 1173, 3179
Cfr10I RCCGGY 2 cut(s) 2729, 3011
Cfr13I GGNCC 6 cut(s) 305, 598, 1875, 2255, 2321, 2345
Csp6I GTAC 8 cut(s) 353, 677, 805, 1905, 2356, 2818, 3019, 3247
CspAI ACCGGT 1 cut(s) 3011
CspCI CAANNNNNGTGG 6 cut(s) 2682, 2717, 2898, 2933, 3169, 3204
CviQI GTAC 8 cut(s) 353, 677, 805, 1905, 2356, 2818, 3019, 3247
DpnI GATC 9 cut(s) 385, 512, 871, 1473, 2660, 2798, 2921, 2997, 3132
DpnII GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
DraI TTTAAA 2 cut(s) 402, 846
DriI GACNNNNNGTC 3 cut(s) 596, 2253, 2551
EaeI YGGCCR 1 cut(s) 502
Eam1104I CTCTTC 2 cut(s) 1150, 3202
Eam1105I GACNNNNNGTC 3 cut(s) 596, 2253, 2551
EarI CTCTTC 2 cut(s) 1150, 3202
Ecl136II GAGCTC 1 cut(s) 1977
Eco130I CCWWGG 1 cut(s) 1610
Eco147I AGGCCT 3 cut(s) 1048, 2051, 2211
Eco24I GRGCYC 2 cut(s) 1979, 3029
Eco31I GGTCTC 1 cut(s) 94
Eco47I GGWCC 3 cut(s) 598, 1875, 2255
Eco53kI GAGCTC 1 cut(s) 1977
Eco57I CTGAAG 4 cut(s) 184, 518, 722, 1836
Eco91I GGTNACC 2 cut(s) 1752, 2245
EcoICRI GAGCTC 1 cut(s) 1977
EcoO109I RGGNCCY 1 cut(s) 2345
EcoO65I GGTNACC 2 cut(s) 1752, 2245
EcoRI GAATTC 3 cut(s) 714, 826, 1960
EcoRII CCWGG 4 cut(s) 600, 2211, 2257, 2928
EcoT14I CCWWGG 1 cut(s) 1610
EcoT22I ATGCAT 2 cut(s) 121, 2815
EcoT38I GRGCYC 2 cut(s) 1979, 3029
ErhI CCWWGG 1 cut(s) 1610
FaqI GGGAC 1 cut(s) 1009
FauI CCCGC 1 cut(s) 1390
FauNDI CATATG 1 cut(s) 1207
FbaI TGATCA 2 cut(s) 2796, 2919
FblI GTMKAC 2 cut(s) 988, 2538
Fnu4HI GCNGC 5 cut(s) 177, 1395, 1403, 2058, 2132
FokI GGATG 9 cut(s) 227, 235, 284, 407, 471, 1286, 1372, 2891, 2901
FriOI GRGCYC 2 cut(s) 1979, 3029
Fsp4HI GCNGC 5 cut(s) 177, 1395, 1403, 2058, 2132
GlaI GCGC 2 cut(s) 1172, 3178
GluI GCNGC 5 cut(s) 177, 1395, 1403, 2058, 2132
GsaI CCCAGC 1 cut(s) 1623
GsuI CTGGAG 1 cut(s) 984
HaeII RGCGCY 2 cut(s) 1174, 3180
HapII CCGG 6 cut(s) 441, 2242, 2730, 3012, 3022, 3030
HhaI GCGC 2 cut(s) 1173, 3179
Hin6I GCGC 2 cut(s) 1171, 3177
HinP1I GCGC 2 cut(s) 1171, 3177
HincII GTYRAC 4 cut(s) 346, 706, 1231, 2291
HindII GTYRAC 4 cut(s) 346, 706, 1231, 2291
HindIII AAGCTT 1 cut(s) 156
HpaII CCGG 6 cut(s) 441, 2242, 2730, 3012, 3022, 3030
HphI GGTGA 8 cut(s) 761, 1008, 1393, 1642, 2110, 2257, 2411, 2581
Hpy166II GTNNAC 9 cut(s) 346, 706, 805, 989, 1231, 1580, 2277, 2291, 2539
Hpy8I GTNNAC 9 cut(s) 346, 706, 805, 989, 1231, 1580, 2277, 2291, 2539
HpyAV CCTTC 9 cut(s) 566, 1436, 2192, 2201, 2710, 2866, 2975, 3104, 3144
HpyCH4III ACNGT 8 cut(s) 343, 352, 763, 958, 1054, 1584, 1799, 3063
HpyCH4IV ACGT 2 cut(s) 696, 2168
HpySE526I ACGT 2 cut(s) 696, 2168
HspAI GCGC 2 cut(s) 1171, 3177
KpnI GGTACC 1 cut(s) 3022
KroI GCCGGC 1 cut(s) 2729
KroNI GCCGGC 1 cut(s) 2731
Ksp22I TGATCA 2 cut(s) 2796, 2919
Kzo9I GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
LguI GCTCTTC 1 cut(s) 3202
LmnI GCTCC 8 cut(s) 115, 1200, 1985, 2184, 2984, 3032, 3039, 3174
Lsp1109I GCAGC 4 cut(s) 1381, 1389, 2044, 2118
LweI GCATC 7 cut(s) 374, 385, 1475, 2209, 2425, 2595, 2879
MaeII ACGT 2 cut(s) 696, 2168
MalI GATC 9 cut(s) 385, 512, 871, 1473, 2660, 2798, 2921, 2997, 3132
MboI GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
MflI RGATCY 2 cut(s) 383, 2995
MhlI GDGCHC 5 cut(s) 1067, 1205, 1979, 1990, 3029
MlsI TGGCCA 1 cut(s) 504
MluNI TGGCCA 1 cut(s) 504
MlyI GAGTC 3 cut(s) 991, 2834, 2962
MmeI TCCRAC 4 cut(s) 1773, 1790, 2728, 2758
Mox20I TGGCCA 1 cut(s) 504
Mph1103I ATGCAT 2 cut(s) 121, 2815
MroNI GCCGGC 1 cut(s) 2729
MroXI GAANNNNTTC 5 cut(s) 250, 819, 1628, 2013, 2855
MscI TGGCCA 1 cut(s) 504
MslI CAYNNNNRTG 3 cut(s) 75, 956, 3277
Msp20I TGGCCA 1 cut(s) 504
MspA1I CMGCKG 1 cut(s) 2650
MspI CCGG 6 cut(s) 441, 2242, 2730, 3012, 3022, 3030
MspR9I CCNGG 7 cut(s) 602, 2213, 2243, 2259, 2930, 3023, 3031
Mva1269I GAATGC 3 cut(s) 119, 178, 2082
MvaI CCWGG 4 cut(s) 602, 2213, 2259, 2930
NaeI GCCGGC 1 cut(s) 2731
NciI CCSGG 3 cut(s) 2243, 3023, 3031
NcoI CCATGG 1 cut(s) 1610
NdeI CATATG 1 cut(s) 1207
NdeII GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
NgoMIV GCCGGC 1 cut(s) 2729
NheI GCTAGC 2 cut(s) 884, 2134
NlaIV GGNNCC 6 cut(s) 111, 1687, 2347, 2997, 3020, 3028
NmuCI GTSAC 5 cut(s) 1315, 1381, 2245, 2965, 3143
NsiI ATGCAT 2 cut(s) 121, 2815
NspI RCATGY 4 cut(s) 119, 937, 1925, 2362
PagI TCATGA 1 cut(s) 1119
PaqCI CACCTGC 1 cut(s) 485
PceI AGGCCT 3 cut(s) 1048, 2051, 2211
PciI ACATGT 2 cut(s) 933, 1921
PciSI GCTCTTC 1 cut(s) 3202
PctI GAATGC 3 cut(s) 119, 178, 2082
PdiI GCCGGC 1 cut(s) 2731
PdmI GAANNNNTTC 5 cut(s) 250, 819, 1628, 2013, 2855
PfeI GAWTC 7 cut(s) 431, 669, 904, 1037, 1678, 1912, 3034
PflMI CCANNNNNTGG 1 cut(s) 1884
PfoI TCCNGGA 1 cut(s) 3029
PinAI ACCGGT 1 cut(s) 3011
PkrI GCNGC 5 cut(s) 178, 1396, 1404, 2059, 2133
PleI GAGTC 3 cut(s) 991, 2834, 2962
PpsI GAGTC 3 cut(s) 991, 2834, 2962
PscI ACATGT 2 cut(s) 933, 1921
PshBI ATTAAT 1 cut(s) 1109
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 1979
Psp6I CCWGG 4 cut(s) 600, 2211, 2257, 2928
PspEI GGTNACC 2 cut(s) 1752, 2245
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 4 cut(s) 600, 2211, 2257, 2928
PspN4I GGNNCC 6 cut(s) 111, 1687, 2347, 2997, 3020, 3028
PspPI GGNCC 6 cut(s) 305, 598, 1875, 2255, 2321, 2345
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 2 cut(s) 383, 2995
PvuII CAGCTG 1 cut(s) 2650
RsaI GTAC 8 cut(s) 354, 678, 806, 1906, 2357, 2819, 3020, 3248
RsaNI GTAC 8 cut(s) 353, 677, 805, 1905, 2356, 2818, 3019, 3247
RseI CAYNNNNRTG 3 cut(s) 75, 956, 3277
SacI GAGCTC 1 cut(s) 1979
SapI GCTCTTC 1 cut(s) 3202
SatI GCNGC 5 cut(s) 177, 1395, 1403, 2058, 2132
Sau3AI GATC 9 cut(s) 383, 510, 869, 1471, 2658, 2796, 2919, 2995, 3130
Sau96I GGNCC 6 cut(s) 305, 598, 1875, 2255, 2321, 2345
SchI GAGTC 3 cut(s) 991, 2834, 2962
ScrFI CCNGG 7 cut(s) 602, 2213, 2243, 2259, 2930, 3023, 3031
SduI GDGCHC 5 cut(s) 1067, 1205, 1979, 1990, 3029
SfaNI GCATC 7 cut(s) 374, 385, 1475, 2209, 2425, 2595, 2879
SgrAI CRCCGGYG 1 cut(s) 3011
SinI GGWCC 3 cut(s) 598, 1875, 2255
SmiMI CAYNNNNRTG 3 cut(s) 75, 956, 3277
SmlI CTYRAG 4 cut(s) 309, 664, 1072, 2618
SmoI CTYRAG 4 cut(s) 309, 664, 1072, 2618
SpeI ACTAGT 1 cut(s) 1567
SseBI AGGCCT 3 cut(s) 1048, 2051, 2211
SsiI CCGC 5 cut(s) 176, 363, 888, 1397, 2516
SspI AATATT 5 cut(s) 418, 551, 1099, 1306, 2013
SstI GAGCTC 1 cut(s) 1979
StuI AGGCCT 3 cut(s) 1048, 2051, 2211
StyD4I CCNGG 7 cut(s) 600, 2211, 2241, 2257, 2928, 3021, 3029
StyI CCWWGG 1 cut(s) 1610
TaaI ACNGT 8 cut(s) 343, 352, 763, 958, 1054, 1584, 1799, 3063
TaiI ACGT 2 cut(s) 699, 2171
TaqI TCGA 6 cut(s) 1215, 1713, 1847, 1869, 2203, 3275
TaqII GACCGA 2 cut(s) 1688, 2243
TatI WGTACW 4 cut(s) 804, 2355, 2817, 3246
TauI GCSGC 1 cut(s) 179
TfiI GAWTC 7 cut(s) 431, 669, 904, 1037, 1678, 1912, 3034
TseFI GTSAC 5 cut(s) 1315, 1381, 2245, 2965, 3143
TseI GCWGC 4 cut(s) 1394, 1402, 2057, 2131
Tsp45I GTSAC 5 cut(s) 1315, 1381, 2245, 2965, 3143
TspDTI ATGAA 9 cut(s) 9, 707, 819, 1108, 1136, 1578, 2439, 2746, 2817
TspGWI ACGGA 3 cut(s) 407, 1784, 1998
Van91I CCANNNNNTGG 1 cut(s) 1884
VpaK11BI GGWCC 3 cut(s) 598, 1875, 2255
VspI ATTAAT 1 cut(s) 1109
XbaI TCTAGA 2 cut(s) 380, 1526
XceI RCATGY 4 cut(s) 119, 937, 1925, 2362
XcmI CCANNNNNNNNNTGG 1 cut(s) 2462
XmiI GTMKAC 2 cut(s) 988, 2538
XmnI GAANNNNTTC 5 cut(s) 250, 819, 1628, 2013, 2855
Zsp2I ATGCAT 2 cut(s) 121, 2815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.