AT3G48360

BTB POZ and TAZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005023
Physical Location & Seq
Reverse (-)
17907767 .. 17910738
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G48360.2

Sequence Viewer

Length: 1095 bp
ATGGAAGCTGTTCTTGTCGCAATGTCCGTCCCCGCCACAACGGAAGACGACGGATTTTCGTTAATCACCGATAAACTTTCATATAATCTAACGCCGACGTCGGACGTTGAGATCGTTACCTCCGATAACCGTCGGATTCCGGCACACTCCGGCGTTCTGGCTTCAGCTTCACCGGTACTGATGAACATCATGAAGAAACCGATGAGACGTTACAGAGGCTGTGGATCTAAAAGAGTCATCAAGATTCTTGGCGTTCCATGCGACGCCGTTTCGGTTTTTATCAAATTCCTCTACTCTTCTAGTTTGACGGAGGATGAGATGGAGAGATATGGAATCCATCTTTTAGCGTTGTCTCACGTCTACATGGTCACCCAGCTGAAGCAACGGTGCTCAAAAGGCGTTGTACAACGTTTAACTACAGAGAACGTAGTCGACGTCCTCCAGCTAGCTCGGCTCTGCGACGCACCCGATGTTTGCCTTCGATCTATGCGTCTGATCCATTCGCAGTTTAAGACCGTTGAGCAGACTGAAGGATGGAAGTTTATTCAAGAACATGATCCTTTCCTCGAGCTCGACATTCTCCAGTTCATCGATGACGCCGAATCGAGGAAGAAAAGAAGGCGACGACATAGAAAGGAGCAGGATCTTTACATGCAACTAAGCGAGGCAATGGAGTGCATAGAGCACATATGCACACAAGGTTGTACATTGGTCGGTCCATCAAACGTAGTAGATAACAACAAAAAGTCAATGACTGCGGAAAAGTCAGAGCCTTGTAAGGCGTTTTCCACGTGTTATGGTCTTCAGCTTTTGATACGTCACTTTGCCGTATGCAAGAGGAGGAATAACGATAAGGGTTGTCTTCGTTGCAAGCGGATGCTTCAACTCTTTAGACTCCATTCTTTGATTTGTGATCAACCCGATTCTTGTCGCGTCCCTCTCTGCAGGCAATTTAGGAAACGGGGAGAACAAGACAAGAAAATGGGTGAAGACACCAAGTGGAAGCTTCTGGTGACAAGGGTTGTGTCTGCAAAAGCTATGACGTCGTTGTGTCAGTCAAAGAAGAACAAATGTGAACAAGCACAAGGGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009737 GO:0009738 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010182 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045935 GO:0046677 GO:0048229 GO:0048511 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051246 GO:0051252 GO:0051338 GO:0051347 GO:0051603 GO:0051716 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071365 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0097305 GO:0097306 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1901701 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2000278 GO:2000573 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04340 ko04341 map04340 map04341
Pfam Domains
Protein Families
BTB zf-TAZ

Protein Analysis

364

Amino Acids

41.56

Weight (kDa)

9.15

Isoelectric Point (pI)

58.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 33 - 136 5.5e-10 BTB/POZ domain
zf-TAZ PF02135 221 - 315 2.6e-08 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 101, 438, 1046
AccI GTMKAC 2 cut(s) 360, 432
AccII CGCG 1 cut(s) 933
AciI CCGC 3 cut(s) 33, 758, 874
AclI AACGTT 1 cut(s) 409
AclWI GGATC 4 cut(s) 232, 490, 551, 651
AcsI RAATTY 1 cut(s) 284
AcuI CTGAAG 4 cut(s) 147, 398, 549, 788
AcvI CACGTG 1 cut(s) 792
AcyI GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
AdeI CACNNNGTG 1 cut(s) 999
AfaI GTAC 3 cut(s) 177, 405, 706
AfiI CCNNNNNNNGG 1 cut(s) 606
AflIII ACRYGT 1 cut(s) 791
AgeI ACCGGT 1 cut(s) 172
AgsI TTSAA 2 cut(s) 548, 884
AjiI CACGTC 1 cut(s) 358
AluBI AGCT 9 cut(s) 8, 167, 376, 445, 449, 571, 808, 1006, 1037
AluI AGCT 9 cut(s) 8, 167, 376, 445, 449, 571, 808, 1006, 1037
Alw21I GWGCWC 3 cut(s) 392, 573, 687
Alw26I GTCTC 2 cut(s) 199, 357
AlwI GGATC 4 cut(s) 232, 490, 551, 651
AlwNI CAGNNNCTG 1 cut(s) 219
Ama87I CYCGRG 1 cut(s) 566
ApoI RAATTY 1 cut(s) 284
AsiGI ACCGGT 1 cut(s) 172
Asp700I GAANNNNTTC 1 cut(s) 9
AspS9I GGNCC 1 cut(s) 716
AsuHPI GGTGA 5 cut(s) 58, 162, 361, 998, 1024
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 1 cut(s) 566
AvaII GGWCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 573
BbrPI CACGTG 1 cut(s) 792
BbsI GAAGAC 4 cut(s) 51, 794, 854, 996
Bbv12I GWGCWC 3 cut(s) 392, 573, 687
BccI CCATC 4 cut(s) 313, 345, 528, 727
BceAI ACGGC 2 cut(s) 251, 812
BclI TGATCA 1 cut(s) 913
BcoDI GTCTC 2 cut(s) 199, 357
BfaI CTAG 2 cut(s) 300, 446
BfmI CTRYAG 2 cut(s) 417, 943
Bme18I GGWCC 1 cut(s) 716
BmeT110I CYCGRG 1 cut(s) 566
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 1 cut(s) 716
BmsI GCATC 1 cut(s) 867
BmtI GCTAGC 1 cut(s) 449
BpiI GAAGAC 4 cut(s) 51, 794, 854, 996
BpmI CTGGAG 2 cut(s) 425, 566
Bsa29I ATCGAT 1 cut(s) 591
BsaAI YACGTR 1 cut(s) 792
BsaBI GATNNNNATC 1 cut(s) 185
BsaHI GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
BsaWI WCCGGW 1 cut(s) 172
Bsc4I CCNNNNNNNGG 1 cut(s) 606
Bse118I RCCGGY 1 cut(s) 172
Bse1I ACTGG 1 cut(s) 583
Bse3DI GCAATG 2 cut(s) 27, 675
Bse8I GATNNNNATC 1 cut(s) 185
BseCI ATCGAT 1 cut(s) 591
BseGI GGATG 3 cut(s) 319, 539, 882
BseJI GATNNNNATC 1 cut(s) 185
BseLI CCNNNNNNNGG 1 cut(s) 606
BseMI GCAATG 2 cut(s) 27, 675
BseNI ACTGG 1 cut(s) 583
BseRI GAGGAG 1 cut(s) 853
BseYI CCCAGC 1 cut(s) 372
Bsh1236I CGCG 1 cut(s) 933
BshTI ACCGGT 1 cut(s) 172
BshVI ATCGAT 1 cut(s) 591
BsiHKAI GWGCWC 3 cut(s) 392, 573, 687
BsiHKCI CYCGRG 1 cut(s) 566
BsiSI CCGG 3 cut(s) 140, 150, 173
BslFI GGGAC 2 cut(s) 14, 920
BslI CCNNNNNNNGG 1 cut(s) 606
BsmAI GTCTC 2 cut(s) 199, 357
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 2 cut(s) 14, 920
BsoBI CYCGRG 1 cut(s) 566
Bsp1286I GDGCHC 3 cut(s) 392, 573, 687
Bsp1407I TGTACA 2 cut(s) 403, 704
Bsp143I GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
BspACI CCGC 3 cut(s) 33, 758, 874
BspDI ATCGAT 1 cut(s) 591
BspFNI CGCG 1 cut(s) 933
BspHI TCATGA 1 cut(s) 189
BspMAI CTGCAG 1 cut(s) 947
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 4 cut(s) 232, 490, 551, 651
BsrDI GCAATG 2 cut(s) 27, 675
BsrFI RCCGGY 1 cut(s) 172
BsrGI TGTACA 2 cut(s) 403, 704
BsrI ACTGG 1 cut(s) 583
BssAI RCCGGY 1 cut(s) 172
BssMI GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
BssNI GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
Bst4CI ACNGT 3 cut(s) 131, 387, 517
Bst6I CTCTTC 1 cut(s) 301
BstACI GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
BstAUI TGTACA 2 cut(s) 403, 704
BstBAI YACGTR 1 cut(s) 792
BstC8I GCNNGC 3 cut(s) 447, 872, 947
BstDEI CTNAG 1 cut(s) 659
BstEII GGTNACC 1 cut(s) 367
BstF5I GGATG 3 cut(s) 319, 539, 882
BstFNI CGCG 1 cut(s) 933
BstKTI GATC 7 cut(s) 114, 227, 485, 498, 559, 646, 916
BstMAI GTCTC 2 cut(s) 199, 357
BstMBI GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
BstMWI GCNNNNNNNGC 3 cut(s) 258, 396, 451
BstNSI RCATGY 1 cut(s) 655
BstPI GGTNACC 1 cut(s) 367
BstSFI CTRYAG 2 cut(s) 417, 943
BstUI CGCG 1 cut(s) 933
BstV2I GAAGAC 4 cut(s) 51, 794, 854, 996
BstX2I RGATCY 2 cut(s) 224, 643
BstYI RGATCY 2 cut(s) 224, 643
Bsu15I ATCGAT 1 cut(s) 591
BsuTUI ATCGAT 1 cut(s) 591
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 3 cut(s) 319, 539, 882
Cac8I GCNNGC 3 cut(s) 447, 872, 947
CaiI CAGNNNCTG 1 cut(s) 219
CciI TCATGA 1 cut(s) 189
Cfr10I RCCGGY 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 716
ClaI ATCGAT 1 cut(s) 591
CseI GACGC 5 cut(s) 272, 470, 479, 605, 922
Csp6I GTAC 3 cut(s) 176, 404, 705
CspAI ACCGGT 1 cut(s) 172
CviAII CATG 5 cut(s) 190, 258, 364, 554, 652
CviQI GTAC 3 cut(s) 176, 404, 705
DdeI CTNAG 1 cut(s) 659
DpnI GATC 7 cut(s) 113, 226, 484, 497, 558, 645, 915
DpnII GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
DraIII CACNNNGTG 1 cut(s) 999
Eam1104I CTCTTC 1 cut(s) 301
EarI CTCTTC 1 cut(s) 301
Ecl136II GAGCTC 1 cut(s) 571
Eco24I GRGCYC 1 cut(s) 573
Eco47I GGWCC 1 cut(s) 716
Eco53kI GAGCTC 1 cut(s) 571
Eco57I CTGAAG 4 cut(s) 147, 398, 549, 788
Eco72I CACGTG 1 cut(s) 792
Eco88I CYCGRG 1 cut(s) 566
Eco91I GGTNACC 1 cut(s) 367
EcoICRI GAGCTC 1 cut(s) 571
EcoO65I GGTNACC 1 cut(s) 367
EcoT38I GRGCYC 1 cut(s) 573
Esp3I CGTCTC 1 cut(s) 199
FaeI CATG 5 cut(s) 193, 261, 367, 557, 655
FalI AAGNNNNNCTT 1 cut(s) 29
FaqI GGGAC 2 cut(s) 14, 920
FatI CATG 5 cut(s) 189, 257, 363, 553, 651
FauI CCCGC 1 cut(s) 40
FauNDI CATATG 1 cut(s) 689
FbaI TGATCA 1 cut(s) 913
FblI GTMKAC 2 cut(s) 360, 432
FokI GGATG 3 cut(s) 326, 546, 889
FriOI GRGCYC 1 cut(s) 573
FspBI CTAG 2 cut(s) 300, 446
GsaI CCCAGC 1 cut(s) 376
GsuI CTGGAG 2 cut(s) 425, 566
HapII CCGG 3 cut(s) 140, 150, 173
HgaI GACGC 5 cut(s) 272, 470, 479, 605, 922
Hin1I GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
Hin1II CATG 5 cut(s) 193, 261, 367, 557, 655
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 7 cut(s) 136, 234, 244, 333, 602, 894, 923
HpaII CCGG 3 cut(s) 140, 150, 173
HphI GGTGA 5 cut(s) 58, 162, 361, 998, 1024
Hpy166II GTNNAC 3 cut(s) 361, 433, 1076
Hpy188I TCNGA 5 cut(s) 103, 124, 135, 495, 769
Hpy188III TCNNGA 3 cut(s) 190, 241, 548
Hpy8I GTNNAC 3 cut(s) 361, 433, 1076
Hpy99I CGWCG 9 cut(s) 53, 100, 103, 135, 266, 437, 464, 627, 1048
HpyAV CCTTC 3 cut(s) 488, 524, 612
HpyCH4III ACNGT 3 cut(s) 131, 387, 517
HpyCH4V TGCA 7 cut(s) 655, 678, 693, 834, 870, 945, 1031
HpyF10VI GCNNNNNNNGC 3 cut(s) 258, 396, 451
HpyF3I CTNAG 1 cut(s) 659
Hsp92I GRCGYC 5 cut(s) 98, 264, 435, 597, 1043
Hsp92II CATG 5 cut(s) 193, 261, 367, 557, 655
Ksp22I TGATCA 1 cut(s) 913
Kzo9I GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
LmnI GCTCC 1 cut(s) 637
LweI GCATC 1 cut(s) 867
MaeI CTAG 2 cut(s) 300, 446
MaeIII GTNAC 5 cut(s) 115, 209, 367, 818, 1012
MalI GATC 7 cut(s) 113, 226, 484, 497, 558, 645, 915
MboI GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
MboII GAAGA 8 cut(s) 56, 205, 288, 622, 794, 854, 1001, 1075
MflI RGATCY 2 cut(s) 224, 643
MhlI GDGCHC 3 cut(s) 392, 573, 687
MluCI AATT 2 cut(s) 284, 950
MlyI GAGTC 2 cut(s) 243, 888
MmeI TCCRAC 2 cut(s) 81, 113
MroXI GAANNNNTTC 1 cut(s) 9
MseI TTAA 4 cut(s) 62, 413, 510, 1093
MspA1I CMGCKG 1 cut(s) 376
MspI CCGG 3 cut(s) 140, 150, 173
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 3 cut(s) 258, 396, 451
NdeI CATATG 1 cut(s) 689
NdeII GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 5 cut(s) 193, 261, 367, 557, 655
NmeAIII GCCGAG 1 cut(s) 430
NmuCI GTSAC 3 cut(s) 367, 818, 1012
NspI RCATGY 1 cut(s) 655
PaeR7I CTCGAG 1 cut(s) 566
PagI TCATGA 1 cut(s) 189
PcsI WCGNNNNNNNCGW 6 cut(s) 24, 111, 120, 432, 487, 597
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 5 cut(s) 136, 244, 333, 602, 923
PinAI ACCGGT 1 cut(s) 172
PleI GAGTC 2 cut(s) 242, 888
PmaCI CACGTG 1 cut(s) 792
PmlI CACGTG 1 cut(s) 792
PpsI GAGTC 2 cut(s) 242, 888
Ppu21I YACGTR 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 573
Psp1406I AACGTT 1 cut(s) 409
PspCI CACGTG 1 cut(s) 792
PspEI GGTNACC 1 cut(s) 367
PspFI CCCAGC 1 cut(s) 372
PspPI GGNCC 1 cut(s) 716
PspXI VCTCGAGB 1 cut(s) 566
PstI CTGCAG 1 cut(s) 947
PstNI CAGNNNCTG 1 cut(s) 219
PsuI RGATCY 2 cut(s) 224, 643
PvuII CAGCTG 1 cut(s) 376
RsaI GTAC 3 cut(s) 177, 405, 706
RsaNI GTAC 3 cut(s) 176, 404, 705
SacI GAGCTC 1 cut(s) 573
SalI GTCGAC 1 cut(s) 431
SaqAI TTAA 4 cut(s) 62, 413, 510, 1093
Sau3AI GATC 7 cut(s) 111, 224, 482, 495, 556, 643, 913
Sau96I GGNCC 1 cut(s) 716
SchI GAGTC 2 cut(s) 243, 888
SduI GDGCHC 3 cut(s) 392, 573, 687
SfaNI GCATC 1 cut(s) 867
SfcI CTRYAG 2 cut(s) 417, 943
Sfr274I CTCGAG 1 cut(s) 566
SinI GGWCC 1 cut(s) 716
SlaI CTCGAG 1 cut(s) 566
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
Sse9I AATT 2 cut(s) 284, 950
SsiI CCGC 3 cut(s) 33, 758, 874
SspMI CTAG 2 cut(s) 300, 446
SstI GAGCTC 1 cut(s) 573
TaaI ACNGT 3 cut(s) 131, 387, 517
TaqI TCGA 6 cut(s) 432, 481, 567, 573, 591, 605
TaqII GACCGA 1 cut(s) 704
TasI AATT 2 cut(s) 284, 950
TatI WGTACW 2 cut(s) 403, 704
TfiI GAWTC 5 cut(s) 136, 244, 333, 602, 923
Tru1I TTAA 4 cut(s) 62, 413, 510, 1093
Tru9I TTAA 4 cut(s) 62, 413, 510, 1093
TseFI GTSAC 3 cut(s) 367, 818, 1012
Tsp45I GTSAC 3 cut(s) 367, 818, 1012
TspDTI ATGAA 4 cut(s) 69, 197, 206, 577
TspGWI ACGGA 4 cut(s) 16, 56, 66, 323
VpaK11BI GGWCC 1 cut(s) 716
XapI RAATTY 1 cut(s) 284
XceI RCATGY 1 cut(s) 655
XhoI CTCGAG 1 cut(s) 566
XmiI GTMKAC 2 cut(s) 360, 432
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 2 cut(s) 300, 446
ZraI GACGTC 3 cut(s) 99, 436, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.