Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005023

Physical Location & Seq

Genomic Coordinates Forward (+)

57439230 .. 57442541

Gene Structure 3312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00263500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGGAAACCAATCATCATACCGGAACAACCAACATCTCCGACGACCTCTACGGCCTCTCTCCGGCAACCTCACCAACCAAATCCGGACCTCGTGAGCTACCCGAACCCGATATCCACATCCTCACCCGCGATGCTGTTCGCATTCCAGCCCACGCTAGCATTCTGGCCTCCGTGTCGCCGGTGCTGGAAAACATAATAGATCGACCACGTAAGCACCGCAGCTCCGAAAGAGTCATCCCCATCCTCGGCGTCCCAAACGACGCCGTCGTCGCCTTCACCAGCTTCCTCTACTCCTCAAGGTGCACGGAAGAGCACATGGAGAAGTACGCGATCCACCTACTGGCGTTGTCCCACGTGTACTTGGTTCCCCAGCTGAAGCAGAGATGCACCAAGGAGCTGGGTCAACGTTTGAGCGTTGACAATGTCGTCGACGTGCTCCAACTGGCCAGGCTCTGCGACGCAGCGGATCTCTACCTCAAGTGTATGAAGTTGGTTGCCAATCACTTTAAGGCTGTGGAGGAAACTGAAGGCTGGAAATTTGTTCAAGACCATGATCCTTACCTCGAACTCGACATTTTGCAGTTCATCGATGAAACTGAATCGAGGAAGAAGAGGACAAGAAGGCATAGGGAGGAACAGAGGTTGTATCTACAGCTAAGTGAGGCAATGGAGTGCTTGGAGCACATATGTACTGAAGGTTGCACTAGTGTCGGGCCGTATGACATGGAGCCGGGTCAGAAGAGAGCCCCGTGTAGCAAGTTCGGCACATGTCAAGGGCTGCAGCACCTGTTTCAGCACTTCGCCACTTGCAAGAGGAGAGTGAACGGAGGTTGCTTGCGTTGCAAGCGGATGTGGCAGCTTCTTAGGCTTCACTCGTCGATGTGTGACCAATCGGATTCTTGCCGAGTTCCCCTTTGCAGGCAGTTCAAGTTGAAATTGATACACGAGAAGAAGAGAGACGATGCAAGGTGGAAACTGCTGGTGAGGAAGGTTGTATCAGCCAAAGCCATATCTTCTCTGGCTCTGGCTAAGAGGAAGAGAGAGGAGGATCAACTCGGCGAAACCAGAAGCCACTGCGGTGATCATGGAATTGGAAGCTTCAGACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009737 GO:0009738 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010182 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045935 GO:0046677 GO:0048229 GO:0048511 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051246 GO:0051252 GO:0051338 GO:0051347 GO:0051603 GO:0051716 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071365 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0097305 GO:0097306 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1901701 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2000278 GO:2000573 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB zf-TAZ

Protein Analysis

369

Amino Acids

42.2

Weight (kDa)

8.79

Isoelectric Point (pI)

61.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	37 - 135	3.6e-10	BTB/POZ domain
zf-TAZ	PF02135	220 - 306	1.4e-11	TAZ zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48360 AT3G48360 AT3G48360 AT5G63160 AT5G63160 AT5G63160
fragaria_vesca	FvH4_5g06740 FvH4_5g06740 FvH4_5g06740 FvH4_5g06740 FvH4_5g06740 FvH4_5g06740 FvH4_5g06740 FvH4_5g06740
malus_domestica	MD06G1161300.v1.1 MD14G1167000.v1.1
prunus_persica	Prupe.5G161100_v2.0.a1
pyrus_communis	pycom06g14410 pycom14g13940
rosa_chinensis	RchiOBHm_Chr7g0191831
rosa_laevigata	RLG00000004421
rosa_multiflora	Rmu_sc0034734.1_g000001 Rmu_ssc0000421.1_g000006
rosa_roxburghii	Rroxscaffold_3G00263500
rosa_rugosa	Rorug06G0511600
rosa_samantha	Rh7AG121700 Rh7BG123100 Rh7CG126000 Rh7DG124800
rosa_wichuraiana	Rw7G010350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	266, 425
AccB7I	CCANNNNNTGG	1 cut(s)	340
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	2 cut(s)	129, 329
AccIII	TCCGGA	1 cut(s)	83
AciI	CCGC	5 cut(s)	127, 217, 464, 847, 1077
AclI	AACGTT	1 cut(s)	406
AclWI	GGATC	4 cut(s)	325, 474, 548, 1056
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	1 cut(s)	536
AcuI	CTGAAG	4 cut(s)	395, 546, 714, 1084
AcvI	CACGTG	1 cut(s)	355
AcyI	GRCGYC	2 cut(s)	249, 261
AfaI	GTAC	3 cut(s)	326, 359, 691
AfiI	CCNNNNNNNGG	4 cut(s)	61, 245, 340, 918
AflIII	ACRYGT	2 cut(s)	354, 767
AgsI	TTSAA	3 cut(s)	545, 928, 934
AhlI	ACTAGT	1 cut(s)	704
AjiI	CACGTC	1 cut(s)	433
AjnI	CCWGG	1 cut(s)	446
AleI	CACNNNNGTG	1 cut(s)	1077
AloI	GAACNNNNNNTCC	2 cut(s)	96, 128
AluBI	AGCT	8 cut(s)	97, 222, 282, 373, 397, 655, 859, 1098
AluI	AGCT	8 cut(s)	97, 222, 282, 373, 397, 655, 859, 1098
Alw21I	GWGCWC	4 cut(s)	305, 315, 438, 684
Alw26I	GTCTC	1 cut(s)	951
Alw44I	GTGCAC	1 cut(s)	301
AlwI	GGATC	4 cut(s)	325, 474, 548, 1056
AlwNI	CAGNNNCTG	2 cut(s)	453, 787
Aor13HI	TCCGGA	1 cut(s)	83
AoxI	GGCC	4 cut(s)	52, 165, 444, 713
ApaLI	GTGCAC	1 cut(s)	301
ApeKI	GCWGC	5 cut(s)	219, 461, 778, 781, 856
ApoI	RAATTY	1 cut(s)	536
AspS9I	GGNCC	2 cut(s)	86, 713
AsuC2I	CCSGG	1 cut(s)	732
AsuHPI	GGTGA	5 cut(s)	63, 115, 268, 994, 1091
AsuNHI	GCTAGC	1 cut(s)	155
AvaII	GGWCC	1 cut(s)	86
BaeGI	GKGCMC	1 cut(s)	305
BalI	TGGCCA	1 cut(s)	446
BanII	GRGCYC	1 cut(s)	748
BauI	CACGAG	2 cut(s)	90, 944
BbrPI	CACGTG	1 cut(s)	355
Bbv12I	GWGCWC	4 cut(s)	305, 315, 438, 684
BbvI	GCAGC	5 cut(s)	231, 473, 765, 793, 868
BccI	CCATC	1 cut(s)	248
BceAI	ACGGC	3 cut(s)	67, 248, 700
BcgI	CGANNNNNNTGC	2 cut(s)	691, 725
BciT130I	CCWGG	1 cut(s)	448
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	1 cut(s)	732
BcoDI	GTCTC	1 cut(s)	951
BcuI	ACTAGT	1 cut(s)	704
BfaI	CTAG	2 cut(s)	156, 705
BfmI	CTRYAG	2 cut(s)	650, 779
BisI	GCNGC	5 cut(s)	220, 462, 779, 782, 857
BlsI	GCNGC	5 cut(s)	221, 463, 780, 783, 858
Bme1390I	CCNGG	2 cut(s)	448, 732
Bme18I	GGWCC	1 cut(s)	86
BmgBI	CACGTC	1 cut(s)	433
BmgT120I	GGNCC	2 cut(s)	86, 713
BmiI	GGNNCC	2 cut(s)	366, 729
BmrFI	CCNGG	2 cut(s)	448, 732
BmsI	GCATC	3 cut(s)	121, 374, 952
BmtI	GCTAGC	1 cut(s)	159
BpuEI	CTTGAG	2 cut(s)	280, 461
BpuMI	CCSGG	1 cut(s)	732
Bsa29I	ATCGAT	1 cut(s)	588
BsaAI	YACGTR	2 cut(s)	209, 355
BsaHI	GRCGYC	2 cut(s)	249, 261
BsaJI	CCNNGG	2 cut(s)	244, 390
BsaWI	WCCGGW	2 cut(s)	20, 83
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 245, 340, 918
Bse118I	RCCGGY	1 cut(s)	178
Bse1I	ACTGG	2 cut(s)	345, 447
Bse3DI	GCAATG	1 cut(s)	672
BseAI	TCCGGA	1 cut(s)	83
BseBI	CCWGG	1 cut(s)	448
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	2 cut(s)	244, 390
BseGI	GGATG	4 cut(s)	117, 234, 240, 855
BseLI	CCNNNNNNNGG	4 cut(s)	61, 245, 340, 918
BseMI	GCAATG	1 cut(s)	672
BseNI	ACTGG	2 cut(s)	345, 447
BseRI	GAGGAG	3 cut(s)	283, 829, 1058
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	5 cut(s)	231, 473, 765, 793, 868
BseYI	CCCAGC	2 cut(s)	369, 397
Bsh1236I	CGCG	2 cut(s)	129, 329
BshFI	GGCC	4 cut(s)	54, 167, 446, 715
BshVI	ATCGAT	1 cut(s)	588
BsiHKAI	GWGCWC	4 cut(s)	305, 315, 438, 684
BsiSI	CCGG	5 cut(s)	21, 62, 84, 179, 731
BslFI	GGGAC	2 cut(s)	236, 334
BslI	CCNNNNNNNGG	4 cut(s)	61, 245, 340, 918
BsmAI	GTCTC	1 cut(s)	951
BsmBI	CGTCTC	1 cut(s)	951
BsmFI	GGGAC	2 cut(s)	236, 334
BsmI	GAATGC	2 cut(s)	141, 159
BsnI	GGCC	4 cut(s)	54, 167, 446, 715
Bsp1286I	GDGCHC	5 cut(s)	305, 315, 438, 684, 748
Bsp13I	TCCGGA	1 cut(s)	83
Bsp143I	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
BspACI	CCGC	5 cut(s)	127, 217, 464, 847, 1077
BspANI	GGCC	4 cut(s)	54, 167, 446, 715
BspDI	ATCGAT	1 cut(s)	588
BspEI	TCCGGA	1 cut(s)	83
BspFNI	CGCG	2 cut(s)	129, 329
BspLI	GGNNCC	2 cut(s)	366, 729
BspMAI	CTGCAG	1 cut(s)	783
BspOI	GCTAGC	1 cut(s)	159
BspPI	GGATC	4 cut(s)	325, 474, 548, 1056
BspQI	GCTCTTC	1 cut(s)	303
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	1 cut(s)	178
BsrI	ACTGG	2 cut(s)	345, 447
BssAI	RCCGGY	1 cut(s)	178
BssECI	CCNNGG	2 cut(s)	244, 390
BssMI	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
BssNI	GRCGYC	2 cut(s)	249, 261
BssSI	CACGAG	2 cut(s)	90, 944
BssT1I	CCWWGG	1 cut(s)	390
Bst2BI	CACGAG	2 cut(s)	90, 944
Bst2UI	CCWGG	1 cut(s)	448
Bst4CI	ACNGT	1 cut(s)	1107
Bst6I	CTCTTC	5 cut(s)	303, 605, 734, 947, 1031
BstACI	GRCGYC	2 cut(s)	249, 261
BstBAI	YACGTR	2 cut(s)	209, 355
BstC8I	GCNNGC	4 cut(s)	157, 836, 845, 920
BstDEI	CTNAG	3 cut(s)	656, 863, 1029
BstF5I	GGATG	4 cut(s)	117, 234, 240, 855
BstFNI	CGCG	2 cut(s)	129, 329
BstKTI	GATC	6 cut(s)	202, 333, 469, 556, 1051, 1084
BstMAI	GTCTC	1 cut(s)	951
BstMBI	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
BstMWI	GCNNNNNNNGC	6 cut(s)	269, 762, 840, 844, 853, 865
BstNI	CCWGG	1 cut(s)	448
BstNSI	RCATGY	1 cut(s)	771
BstSCI	CCNGG	2 cut(s)	446, 730
BstSFI	CTRYAG	2 cut(s)	650, 779
BstSLI	GKGCMC	1 cut(s)	305
BstUI	CGCG	2 cut(s)	129, 329
BstV1I	GCAGC	5 cut(s)	231, 473, 765, 793, 868
BstX2I	RGATCY	1 cut(s)	466
BstXI	CCANNNNNNTGG	1 cut(s)	397
BstYI	RGATCY	1 cut(s)	466
Bsu15I	ATCGAT	1 cut(s)	588
BsuRI	GGCC	4 cut(s)	54, 167, 446, 715
BsuTUI	ATCGAT	1 cut(s)	588
BtgZI	GCGATG	1 cut(s)	144
BtrI	CACGTC	1 cut(s)	433
BtsCI	GGATG	4 cut(s)	117, 234, 240, 855
BtsI	GCAGTG	1 cut(s)	1072
BtsIMutI	CAGTG	1 cut(s)	1072
Cac8I	GCNNGC	4 cut(s)	157, 836, 845, 920
CaiI	CAGNNNCTG	2 cut(s)	453, 787
Cfr10I	RCCGGY	1 cut(s)	178
Cfr13I	GGNCC	2 cut(s)	86, 713
ClaI	ATCGAT	1 cut(s)	588
CseI	GACGC	3 cut(s)	238, 269, 467
Csp6I	GTAC	3 cut(s)	325, 358, 690
CviAII	CATG	5 cut(s)	316, 551, 724, 768, 1085
CviQI	GTAC	3 cut(s)	325, 358, 690
DdeI	CTNAG	3 cut(s)	656, 863, 1029
DpnI	GATC	6 cut(s)	201, 332, 468, 555, 1050, 1083
DpnII	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
DrdI	GACNNNNNNGTC	2 cut(s)	266, 425
DseDI	GACNNNNNNGTC	2 cut(s)	266, 425
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	5 cut(s)	303, 605, 734, 947, 1031
EarI	CTCTTC	5 cut(s)	303, 605, 734, 947, 1031
Eco130I	CCWWGG	1 cut(s)	390
Eco24I	GRGCYC	1 cut(s)	748
Eco32I	GATATC	1 cut(s)	112
Eco47I	GGWCC	1 cut(s)	86
Eco57I	CTGAAG	4 cut(s)	395, 546, 714, 1084
Eco72I	CACGTG	1 cut(s)	355
EcoRII	CCWGG	1 cut(s)	446
EcoRV	GATATC	1 cut(s)	112
EcoT14I	CCWWGG	1 cut(s)	390
EcoT38I	GRGCYC	1 cut(s)	748
ErhI	CCWWGG	1 cut(s)	390
Esp3I	CGTCTC	1 cut(s)	951
FaeI	CATG	5 cut(s)	319, 554, 727, 771, 1088
FaqI	GGGAC	2 cut(s)	236, 334
FatI	CATG	5 cut(s)	315, 550, 723, 767, 1084
FauI	CCCGC	1 cut(s)	134
FauNDI	CATATG	1 cut(s)	686
FbaI	TGATCA	1 cut(s)	1081
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	5 cut(s)	220, 462, 779, 782, 857
FokI	GGATG	4 cut(s)	104, 221, 227, 862
FriOI	GRGCYC	1 cut(s)	748
Fsp4HI	GCNGC	5 cut(s)	220, 462, 779, 782, 857
FspBI	CTAG	2 cut(s)	156, 705
GluI	GCNGC	5 cut(s)	220, 462, 779, 782, 857
GsaI	CCCAGC	2 cut(s)	373, 401
HaeIII	GGCC	4 cut(s)	54, 167, 446, 715
HapII	CCGG	5 cut(s)	21, 62, 84, 179, 731
HgaI	GACGC	3 cut(s)	238, 269, 467
Hin1I	GRCGYC	2 cut(s)	249, 261
Hin1II	CATG	5 cut(s)	319, 554, 727, 771, 1088
HincII	GTYRAC	3 cut(s)	404, 418, 430
HindII	GTYRAC	3 cut(s)	404, 418, 430
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	3 cut(s)	231, 599, 896
HpaII	CCGG	5 cut(s)	21, 62, 84, 179, 731
HphI	GGTGA	5 cut(s)	63, 115, 268, 994, 1091
Hpy166II	GTNNAC	6 cut(s)	303, 358, 404, 418, 430, 823
Hpy188I	TCNGA	5 cut(s)	40, 226, 738, 895, 1103
Hpy188III	TCNNGA	3 cut(s)	84, 92, 545
Hpy8I	GTNNAC	6 cut(s)	303, 358, 404, 418, 430, 823
Hpy99I	CGWCG	8 cut(s)	44, 263, 269, 272, 431, 434, 461, 880
HpyAV	CCTTC	5 cut(s)	283, 521, 615, 689, 982
HpyCH4III	ACNGT	1 cut(s)	1107
HpyCH4IV	ACGT	4 cut(s)	208, 354, 406, 432
HpyCH4V	TGCA	9 cut(s)	303, 387, 580, 702, 781, 810, 843, 918, 965
HpyF10VI	GCNNNNNNNGC	6 cut(s)	269, 762, 840, 844, 853, 865
HpyF3I	CTNAG	3 cut(s)	656, 863, 1029
HpySE526I	ACGT	4 cut(s)	208, 354, 406, 432
Hsp92I	GRCGYC	2 cut(s)	249, 261
Hsp92II	CATG	5 cut(s)	319, 554, 727, 771, 1088
Kpn2I	TCCGGA	1 cut(s)	83
Ksp22I	TGATCA	1 cut(s)	1081
Kzo9I	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
LguI	GCTCTTC	1 cut(s)	303
LmnI	GCTCC	5 cut(s)	227, 394, 441, 679, 727
Lsp1109I	GCAGC	5 cut(s)	231, 473, 765, 793, 868
LweI	GCATC	3 cut(s)	121, 374, 952
MaeI	CTAG	2 cut(s)	156, 705
MaeII	ACGT	4 cut(s)	208, 354, 406, 432
MaeIII	GTNAC	1 cut(s)	884
MalI	GATC	6 cut(s)	201, 332, 468, 555, 1050, 1083
MboI	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
MboII	GAAGA	8 cut(s)	320, 619, 622, 751, 961, 964, 1005, 1048
MflI	RGATCY	1 cut(s)	466
MhlI	GDGCHC	5 cut(s)	305, 315, 438, 684, 748
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	3 cut(s)	536, 935, 1089
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	1 cut(s)	240
MmeI	TCCRAC	2 cut(s)	63, 463
Mox20I	TGGCCA	1 cut(s)	446
MroI	TCCGGA	1 cut(s)	83
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	1 cut(s)	507
MslI	CAYNNNNRTG	1 cut(s)	1077
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	2 cut(s)	373, 464
MspI	CCGG	5 cut(s)	21, 62, 84, 179, 731
MspR9I	CCNGG	2 cut(s)	448, 732
Mva1269I	GAATGC	2 cut(s)	141, 159
MvaI	CCWGG	1 cut(s)	448
MvnI	CGCG	2 cut(s)	129, 329
MwoI	GCNNNNNNNGC	6 cut(s)	269, 762, 840, 844, 853, 865
NciI	CCSGG	1 cut(s)	732
NdeI	CATATG	1 cut(s)	686
NdeII	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
NheI	GCTAGC	1 cut(s)	155
NlaIII	CATG	5 cut(s)	319, 554, 727, 771, 1088
NlaIV	GGNNCC	2 cut(s)	366, 729
NmeAIII	GCCGAG	3 cut(s)	225, 929, 1035
NmuCI	GTSAC	1 cut(s)	884
NspI	RCATGY	1 cut(s)	771
OliI	CACNNNNGTG	1 cut(s)	1077
PciI	ACATGT	1 cut(s)	767
PciSI	GCTCTTC	1 cut(s)	303
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PctI	GAATGC	2 cut(s)	141, 159
PfeI	GAWTC	2 cut(s)	599, 896
PflFI	GACNNNGTC	2 cut(s)	263, 422
PflMI	CCANNNNNTGG	1 cut(s)	340
PkrI	GCNGC	5 cut(s)	221, 463, 780, 783, 858
PleI	GAGTC	1 cut(s)	239
PmaCI	CACGTG	1 cut(s)	355
PmlI	CACGTG	1 cut(s)	355
PpsI	GAGTC	1 cut(s)	239
Ppu21I	YACGTR	2 cut(s)	209, 355
PscI	ACATGT	1 cut(s)	767
Psp1406I	AACGTT	1 cut(s)	406
Psp6I	CCWGG	1 cut(s)	446
PspCI	CACGTG	1 cut(s)	355
PspFI	CCCAGC	2 cut(s)	369, 397
PspGI	CCWGG	1 cut(s)	446
PspN4I	GGNNCC	2 cut(s)	366, 729
PspPI	GGNCC	2 cut(s)	86, 713
PstI	CTGCAG	1 cut(s)	783
PstNI	CAGNNNCTG	2 cut(s)	453, 787
PsuI	RGATCY	1 cut(s)	466
PsyI	GACNNNGTC	2 cut(s)	263, 422
PvuII	CAGCTG	1 cut(s)	373
RsaI	GTAC	3 cut(s)	326, 359, 691
RsaNI	GTAC	3 cut(s)	325, 358, 690
RseI	CAYNNNNRTG	1 cut(s)	1077
SalI	GTCGAC	1 cut(s)	428
SapI	GCTCTTC	1 cut(s)	303
SaqAI	TTAA	1 cut(s)	507
SatI	GCNGC	5 cut(s)	220, 462, 779, 782, 857
Sau3AI	GATC	6 cut(s)	199, 330, 466, 553, 1048, 1081
Sau96I	GGNCC	2 cut(s)	86, 713
SchI	GAGTC	1 cut(s)	240
ScrFI	CCNGG	2 cut(s)	448, 732
SduI	GDGCHC	5 cut(s)	305, 315, 438, 684, 748
SfaNI	GCATC	3 cut(s)	121, 374, 952
SfcI	CTRYAG	2 cut(s)	650, 779
SgrAI	CRCCGGYG	1 cut(s)	178
SgrDI	CGTCGACG	1 cut(s)	428
SinI	GGWCC	1 cut(s)	86
SmiMI	CAYNNNNRTG	1 cut(s)	1077
SmlI	CTYRAG	2 cut(s)	295, 476
SmoI	CTYRAG	2 cut(s)	295, 476
SpeI	ACTAGT	1 cut(s)	704
Sse9I	AATT	3 cut(s)	536, 935, 1089
SsiI	CCGC	5 cut(s)	127, 217, 464, 847, 1077
SspMI	CTAG	2 cut(s)	156, 705
StyD4I	CCNGG	2 cut(s)	446, 730
StyI	CCWWGG	1 cut(s)	390
TaaI	ACNGT	1 cut(s)	1107
TaiI	ACGT	4 cut(s)	211, 357, 409, 435
TaqI	TCGA	7 cut(s)	202, 429, 564, 570, 588, 602, 878
TasI	AATT	3 cut(s)	536, 935, 1089
TatI	WGTACW	2 cut(s)	357, 689
TfiI	GAWTC	2 cut(s)	599, 896
Tru1I	TTAA	1 cut(s)	507
Tru9I	TTAA	1 cut(s)	507
TscAI	CASTG	1 cut(s)	1079
TseFI	GTSAC	1 cut(s)	884
TseI	GCWGC	5 cut(s)	219, 461, 778, 781, 856
Tsp45I	GTSAC	1 cut(s)	884
TspDTI	ATGAA	3 cut(s)	500, 574, 606
TspGWI	ACGGA	3 cut(s)	160, 320, 840
TspRI	CASTG	1 cut(s)	1079
Tth111I	GACNNNGTC	2 cut(s)	263, 422
Van91I	CCANNNNNTGG	1 cut(s)	340
VneI	GTGCAC	1 cut(s)	301
VpaK11BI	GGWCC	1 cut(s)	86
XapI	RAATTY	1 cut(s)	536
XceI	RCATGY	1 cut(s)	771
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1015
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	2 cut(s)	156, 705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.