FvH4_5g06740

BTB POZ and TAZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0005023
Physical Location & Seq
Forward (+)
3973417 .. 3976725
3309 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06740.t3

Sequence Viewer

Length: 1098 bp
ATGGAAACCAACCATCATAACATCTCCGACGACCTCTACGGCCTCTCTCCCGCAACCTCACCCTCCAAATCCGGACCCCGAGAGCTACCCGAACCCGATATCCACATCCTCACCCGCGATGCTGTTCGCATCCCGGCCCACTCTTCCGTCCTGGCGTCGGTGTCGCCGGTGCTGGAGAACATAATAGATCGGCCACGTAAGCACCGCAGCTCCGAGAGACTCATCCCGATCCTCGGCGTCCCACACGGCGCCGTCGTCGCCTTCACCCGCTTCCTCTACACTTCAAGGTGCACGGAGGAGCACATGGAGAAGTACGCGATCCACCTACTGGCGCTGTCTCACGTCTACTTGGTGCCCCAGCTGAAGCAGCTATGCACCAAGGAGCTTGGTCAAGGTTTGAGCGTTGACAATGTCGTGGATGTGCTCCAGTTGGCGAGGCTCTGCGACGCAGCGGATCTCTACCTCAAGTGTATGAAGCTGGTTGCTAATCACTTCAAGGCTGTGGAAGCAACTGAAGGCTGGAAATTTGTTCAGGACCATGATCCTTACCTTGAACTCGACATTTTGCAGTTCATCGATGAACTCGAATCGAGGAAGAAGAGGACAAAGAGGCACAGGGAGGAACAAAGGTTGTATCTCCAGCTGAGTGAGGCAATGGAGTGCTTGGAGCACATATGTACTGAAGGGTGCACTAGTGTCGGGCCATACGACATGGAGCCAGGACAGAAGAGAGGCCCGTGCAGCAAGTTCGGCACATGTCAAGGGCTGCAGCACCTGTTTCAGCACTTCGCCACTTGCAAGAGGAGAGTGAACGGAGGTTGCTCGCGTTGCAAGCGGATGTGGCAGCTTCTTAGGCTTCACTCGTCGATGTGTGACCAATCGGATTCTTGCCGAGTTCCACTTTGCAGGCAGTTCAAGTTGAAAATGATACACGAGAAGAAGAGAGACGATGCAAGGTGGAAACTGCTGGTGAGGAAGGTTGTATCAGCCAAAGCCATATCTTCACTGGCTCTTGCCAAGAGGAAGAGGGAGGAGGATCAACTCGGCGAAACCAGAAGCCACTGCAGTGATCATGGAATTAGAAGCTTCAGACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009737 GO:0009738 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010182 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045935 GO:0046677 GO:0048229 GO:0048511 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051246 GO:0051252 GO:0051338 GO:0051347 GO:0051603 GO:0051716 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071365 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0097305 GO:0097306 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1901701 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2000278 GO:2000573 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04340 ko04341 map04340 map04341
Pfam Domains
Protein Families
BTB zf-TAZ

Protein Analysis

366

Amino Acids

41.83

Weight (kDa)

9.0

Isoelectric Point (pI)

63.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 33 - 130 6.9e-11 BTB/POZ domain
zf-TAZ PF02135 216 - 302 2.8e-12 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 248, 352
AccB7I CCANNNNNTGG 1 cut(s) 328
AccI GTMKAC 1 cut(s) 345
AccII CGCG 3 cut(s) 117, 317, 826
AccIII TCCGGA 1 cut(s) 71
AciI CCGC 6 cut(s) 51, 115, 205, 268, 452, 835
AclWI GGATC 5 cut(s) 223, 313, 462, 536, 1044
AcoI YGGCCR 1 cut(s) 191
AcsI RAATTY 1 cut(s) 524
AcuI CTGAAG 4 cut(s) 383, 534, 702, 1072
AcyI GRCGYC 3 cut(s) 155, 237, 249
AfaI GTAC 2 cut(s) 314, 679
AfiI CCNNNNNNNGG 3 cut(s) 157, 233, 328
AflIII ACRYGT 1 cut(s) 755
AgsI TTSAA 5 cut(s) 285, 496, 554, 916, 922
AhlI ACTAGT 1 cut(s) 692
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 2 cut(s) 150, 718
AleI CACNNNNGTG 1 cut(s) 1065
AloI GAACNNNNNNTCC 2 cut(s) 84, 116
AluBI AGCT 9 cut(s) 85, 210, 361, 370, 385, 478, 643, 847, 1086
AluI AGCT 9 cut(s) 85, 210, 361, 370, 385, 478, 643, 847, 1086
Alw21I GWGCWC 5 cut(s) 293, 303, 426, 672, 692
Alw26I GTCTC 3 cut(s) 211, 342, 939
Alw44I GTGCAC 2 cut(s) 289, 688
AlwI GGATC 5 cut(s) 223, 313, 462, 536, 1044
AlwNI CAGNNNCTG 1 cut(s) 775
Ama87I CYCGRG 1 cut(s) 78
Aor13HI TCCGGA 1 cut(s) 71
AoxI GGCC 5 cut(s) 40, 135, 191, 701, 733
ApaLI GTGCAC 2 cut(s) 289, 688
ApeKI GCWGC 7 cut(s) 207, 367, 449, 741, 766, 769, 844
ApoI RAATTY 1 cut(s) 524
AspLEI GCGC 2 cut(s) 251, 334
AspS9I GGNCC 5 cut(s) 74, 136, 535, 701, 734
AsuC2I CCSGG 1 cut(s) 134
AsuHPI GGTGA 4 cut(s) 51, 103, 256, 982
AvaI CYCGRG 1 cut(s) 78
AvaII GGWCC 2 cut(s) 74, 535
BaeGI GKGCMC 3 cut(s) 293, 357, 692
BanI GGYRCC 2 cut(s) 248, 352
BauI CACGAG 1 cut(s) 932
Bbv12I GWGCWC 5 cut(s) 293, 303, 426, 672, 692
BbvI GCAGC 7 cut(s) 219, 379, 461, 753, 753, 781, 856
BccI CCATC 1 cut(s) 21
BceAI ACGGC 3 cut(s) 55, 236, 262
BcgI CGANNNNNNTGC 4 cut(s) 679, 713, 730, 764
BciT130I CCWGG 2 cut(s) 152, 720
BclI TGATCA 1 cut(s) 1069
BcnI CCSGG 1 cut(s) 134
BcoDI GTCTC 3 cut(s) 211, 342, 939
BcuI ACTAGT 1 cut(s) 692
BfaI CTAG 1 cut(s) 693
BfmI CTRYAG 2 cut(s) 767, 1063
BfoI RGCGCY 2 cut(s) 252, 335
BisI GCNGC 7 cut(s) 208, 368, 450, 742, 767, 770, 845
BlsI GCNGC 7 cut(s) 209, 369, 451, 743, 768, 771, 846
Bme1390I CCNGG 3 cut(s) 134, 152, 720
Bme18I GGWCC 2 cut(s) 74, 535
BmeT110I CYCGRG 1 cut(s) 78
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 5 cut(s) 74, 136, 535, 701, 734
BmiI GGNNCC 4 cut(s) 76, 250, 354, 717
BmrFI CCNGG 3 cut(s) 134, 152, 720
BmsI GCATC 3 cut(s) 109, 138, 940
BpmI CTGGAG 3 cut(s) 194, 410, 623
BpuEI CTTGAG 1 cut(s) 449
BpuMI CCSGG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 576
BsaAI YACGTR 1 cut(s) 197
BsaHI GRCGYC 3 cut(s) 155, 237, 249
BsaJI CCNNGG 2 cut(s) 232, 378
BsaWI WCCGGW 1 cut(s) 71
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 233, 328
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 3 cut(s) 333, 427, 1011
Bse3DI GCAATG 1 cut(s) 660
BseAI TCCGGA 1 cut(s) 71
BseBI CCWGG 2 cut(s) 152, 720
BseCI ATCGAT 1 cut(s) 576
BseDI CCNNGG 2 cut(s) 232, 378
BseGI GGATG 5 cut(s) 105, 129, 222, 424, 843
BseLI CCNNNNNNNGG 3 cut(s) 157, 233, 328
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 1 cut(s) 635
BseNI ACTGG 3 cut(s) 333, 427, 1011
BseRI GAGGAG 3 cut(s) 311, 817, 1046
BseSI GKGCMC 3 cut(s) 293, 357, 692
BseXI GCAGC 7 cut(s) 219, 379, 461, 753, 753, 781, 856
BseYI CCCAGC 1 cut(s) 357
BsgI GTGCAG 1 cut(s) 760
Bsh1236I CGCG 3 cut(s) 117, 317, 826
BshFI GGCC 5 cut(s) 42, 137, 193, 703, 735
BshNI GGYRCC 2 cut(s) 248, 352
BshVI ATCGAT 1 cut(s) 576
BsiHKAI GWGCWC 5 cut(s) 293, 303, 426, 672, 692
BsiHKCI CYCGRG 1 cut(s) 78
BsiSI CCGG 3 cut(s) 72, 134, 167
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 3 cut(s) 157, 233, 328
BsmAI GTCTC 3 cut(s) 211, 342, 939
BsmBI CGTCTC 1 cut(s) 939
BsmFI GGGAC 1 cut(s) 224
BsnI GGCC 5 cut(s) 42, 137, 193, 703, 735
BsoBI CYCGRG 1 cut(s) 78
Bsp1286I GDGCHC 6 cut(s) 293, 303, 357, 426, 672, 692
Bsp13I TCCGGA 1 cut(s) 71
Bsp143I GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
BspACI CCGC 6 cut(s) 51, 115, 205, 268, 452, 835
BspANI GGCC 5 cut(s) 42, 137, 193, 703, 735
BspCNI CTCAG 1 cut(s) 636
BspDI ATCGAT 1 cut(s) 576
BspEI TCCGGA 1 cut(s) 71
BspFNI CGCG 3 cut(s) 117, 317, 826
BspLI GGNNCC 4 cut(s) 76, 250, 354, 717
BspMAI CTGCAG 2 cut(s) 771, 1067
BspPI GGATC 5 cut(s) 223, 313, 462, 536, 1044
BspT107I GGYRCC 2 cut(s) 248, 352
BsrDI GCAATG 1 cut(s) 660
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 3 cut(s) 333, 427, 1011
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 2 cut(s) 232, 378
BssMI GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
BssNI GRCGYC 3 cut(s) 155, 237, 249
BssSI CACGAG 1 cut(s) 932
BssT1I CCWWGG 1 cut(s) 378
Bst2BI CACGAG 1 cut(s) 932
Bst2UI CCWGG 2 cut(s) 152, 720
Bst4CI ACNGT 1 cut(s) 1095
Bst6I CTCTTC 5 cut(s) 148, 593, 722, 935, 1019
BstACI GRCGYC 3 cut(s) 155, 237, 249
BstBAI YACGTR 1 cut(s) 197
BstC8I GCNNGC 3 cut(s) 824, 833, 908
BstDEI CTNAG 2 cut(s) 644, 851
BstF5I GGATG 5 cut(s) 105, 129, 222, 424, 843
BstFNI CGCG 3 cut(s) 117, 317, 826
BstH2I RGCGCY 2 cut(s) 252, 335
BstHHI GCGC 2 cut(s) 251, 334
BstKTI GATC 7 cut(s) 190, 231, 321, 457, 544, 1039, 1072
BstMAI GTCTC 3 cut(s) 211, 342, 939
BstMBI GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
BstNI CCWGG 2 cut(s) 152, 720
BstNSI RCATGY 1 cut(s) 759
BstSCI CCNGG 3 cut(s) 132, 150, 718
BstSFI CTRYAG 2 cut(s) 767, 1063
BstSLI GKGCMC 3 cut(s) 293, 357, 692
BstUI CGCG 3 cut(s) 117, 317, 826
BstV1I GCAGC 7 cut(s) 219, 379, 461, 753, 753, 781, 856
BstX2I RGATCY 1 cut(s) 454
BstYI RGATCY 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 576
BsuRI GGCC 5 cut(s) 42, 137, 193, 703, 735
BsuTUI ATCGAT 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 132
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 5 cut(s) 105, 129, 222, 424, 843
BtsI GCAGTG 2 cut(s) 1060, 1072
BtsIMutI CAGTG 3 cut(s) 1004, 1060, 1072
Cac8I GCNNGC 3 cut(s) 824, 833, 908
CaiI CAGNNNCTG 1 cut(s) 775
CfoI GCGC 2 cut(s) 251, 334
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 5 cut(s) 74, 136, 535, 701, 734
ClaI ATCGAT 1 cut(s) 576
CseI GACGC 3 cut(s) 144, 226, 455
Csp6I GTAC 2 cut(s) 313, 678
CviAII CATG 5 cut(s) 304, 539, 712, 756, 1073
CviQI GTAC 2 cut(s) 313, 678
DdeI CTNAG 2 cut(s) 644, 851
DinI GGCGCC 1 cut(s) 250
DpnI GATC 7 cut(s) 189, 230, 320, 456, 543, 1038, 1071
DpnII GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
EaeI YGGCCR 1 cut(s) 191
Eam1104I CTCTTC 5 cut(s) 148, 593, 722, 935, 1019
EarI CTCTTC 5 cut(s) 148, 593, 722, 935, 1019
Eco130I CCWWGG 1 cut(s) 378
Eco32I GATATC 1 cut(s) 100
Eco47I GGWCC 2 cut(s) 74, 535
Eco57I CTGAAG 4 cut(s) 383, 534, 702, 1072
Eco88I CYCGRG 1 cut(s) 78
EcoRII CCWGG 2 cut(s) 150, 718
EcoRV GATATC 1 cut(s) 100
EcoT14I CCWWGG 1 cut(s) 378
EgeI GGCGCC 1 cut(s) 250
EheI GGCGCC 1 cut(s) 250
ErhI CCWWGG 1 cut(s) 378
Esp3I CGTCTC 1 cut(s) 939
FaeI CATG 5 cut(s) 307, 542, 715, 759, 1076
FaqI GGGAC 1 cut(s) 224
FatI CATG 5 cut(s) 303, 538, 711, 755, 1072
FauI CCCGC 3 cut(s) 58, 122, 275
FauNDI CATATG 1 cut(s) 674
FbaI TGATCA 1 cut(s) 1069
FblI GTMKAC 1 cut(s) 345
Fnu4HI GCNGC 7 cut(s) 208, 368, 450, 742, 767, 770, 845
FokI GGATG 5 cut(s) 92, 116, 209, 431, 850
Fsp4HI GCNGC 7 cut(s) 208, 368, 450, 742, 767, 770, 845
FspBI CTAG 1 cut(s) 693
GlaI GCGC 2 cut(s) 250, 333
GluI GCNGC 7 cut(s) 208, 368, 450, 742, 767, 770, 845
GsaI CCCAGC 1 cut(s) 361
GsuI CTGGAG 3 cut(s) 194, 410, 623
HaeII RGCGCY 2 cut(s) 252, 335
HaeIII GGCC 5 cut(s) 42, 137, 193, 703, 735
HapII CCGG 3 cut(s) 72, 134, 167
HgaI GACGC 3 cut(s) 144, 226, 455
HhaI GCGC 2 cut(s) 251, 334
Hin1I GRCGYC 3 cut(s) 155, 237, 249
Hin1II CATG 5 cut(s) 307, 542, 715, 759, 1076
Hin6I GCGC 2 cut(s) 249, 332
HinP1I GCGC 2 cut(s) 249, 332
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 1084
HinfI GANTC 3 cut(s) 219, 587, 884
HpaII CCGG 3 cut(s) 72, 134, 167
HphI GGTGA 4 cut(s) 51, 103, 256, 982
Hpy166II GTNNAC 5 cut(s) 291, 346, 406, 690, 811
Hpy188I TCNGA 4 cut(s) 28, 214, 883, 1091
Hpy188III TCNNGA 3 cut(s) 72, 226, 533
Hpy8I GTNNAC 5 cut(s) 291, 346, 406, 690, 811
Hpy99I CGWCG 6 cut(s) 32, 160, 257, 260, 449, 868
HpyAV CCTTC 4 cut(s) 271, 509, 677, 970
HpyCH4III ACNGT 1 cut(s) 1095
HpyCH4IV ACGT 2 cut(s) 196, 342
HpyF3I CTNAG 2 cut(s) 644, 851
HpySE526I ACGT 2 cut(s) 196, 342
Hsp92I GRCGYC 3 cut(s) 155, 237, 249
Hsp92II CATG 5 cut(s) 307, 542, 715, 759, 1076
HspAI GCGC 2 cut(s) 249, 332
KasI GGCGCC 1 cut(s) 248
Kpn2I TCCGGA 1 cut(s) 71
Ksp22I TGATCA 1 cut(s) 1069
Kzo9I GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
LmnI GCTCC 6 cut(s) 215, 298, 382, 429, 667, 715
Lsp1109I GCAGC 7 cut(s) 219, 379, 461, 753, 753, 781, 856
LweI GCATC 3 cut(s) 109, 138, 940
MaeI CTAG 1 cut(s) 693
MaeII ACGT 2 cut(s) 196, 342
MaeIII GTNAC 1 cut(s) 872
MalI GATC 7 cut(s) 189, 230, 320, 456, 543, 1038, 1071
MboI GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
MboII GAAGA 8 cut(s) 135, 607, 610, 739, 949, 952, 993, 1036
MflI RGATCY 1 cut(s) 454
MhlI GDGCHC 6 cut(s) 293, 303, 357, 426, 672, 692
MluCI AATT 2 cut(s) 524, 1077
Mly113I GGCGCC 1 cut(s) 249
MlyI GAGTC 1 cut(s) 213
MmeI TCCRAC 1 cut(s) 51
MroI TCCGGA 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 1065
MspA1I CMGCKG 3 cut(s) 361, 452, 643
MspI CCGG 3 cut(s) 72, 134, 167
MspR9I CCNGG 3 cut(s) 134, 152, 720
MvaI CCWGG 2 cut(s) 152, 720
MvnI CGCG 3 cut(s) 117, 317, 826
NarI GGCGCC 1 cut(s) 249
NciI CCSGG 1 cut(s) 134
NdeI CATATG 1 cut(s) 674
NdeII GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
NlaIII CATG 5 cut(s) 307, 542, 715, 759, 1076
NlaIV GGNNCC 4 cut(s) 76, 250, 354, 717
NmeAIII GCCGAG 3 cut(s) 213, 917, 1023
NmuCI GTSAC 1 cut(s) 872
NspI RCATGY 1 cut(s) 759
OliI CACNNNNGTG 1 cut(s) 1065
PciI ACATGT 1 cut(s) 755
PcsI WCGNNNNNNNCGW 3 cut(s) 252, 582, 705
PfeI GAWTC 2 cut(s) 587, 884
PflFI GACNNNGTC 1 cut(s) 410
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 7 cut(s) 209, 369, 451, 743, 768, 771, 846
PleI GAGTC 1 cut(s) 213
PluTI GGCGCC 1 cut(s) 252
PpsI GAGTC 1 cut(s) 213
Ppu21I YACGTR 1 cut(s) 197
PscI ACATGT 1 cut(s) 755
Psp6I CCWGG 2 cut(s) 150, 718
PspFI CCCAGC 1 cut(s) 357
PspGI CCWGG 2 cut(s) 150, 718
PspN4I GGNNCC 4 cut(s) 76, 250, 354, 717
PspPI GGNCC 5 cut(s) 74, 136, 535, 701, 734
PstI CTGCAG 2 cut(s) 771, 1067
PstNI CAGNNNCTG 1 cut(s) 775
PsuI RGATCY 1 cut(s) 454
PsyI GACNNNGTC 1 cut(s) 410
PvuII CAGCTG 2 cut(s) 361, 643
RsaI GTAC 2 cut(s) 314, 679
RsaNI GTAC 2 cut(s) 313, 678
RseI CAYNNNNRTG 1 cut(s) 1065
SatI GCNGC 7 cut(s) 208, 368, 450, 742, 767, 770, 845
Sau3AI GATC 7 cut(s) 187, 228, 318, 454, 541, 1036, 1069
Sau96I GGNCC 5 cut(s) 74, 136, 535, 701, 734
SchI GAGTC 1 cut(s) 213
ScrFI CCNGG 3 cut(s) 134, 152, 720
SduI GDGCHC 6 cut(s) 293, 303, 357, 426, 672, 692
SfaNI GCATC 3 cut(s) 109, 138, 940
SfcI CTRYAG 2 cut(s) 767, 1063
SfoI GGCGCC 1 cut(s) 250
SgrAI CRCCGGYG 1 cut(s) 166
SinI GGWCC 2 cut(s) 74, 535
SmiMI CAYNNNNRTG 1 cut(s) 1065
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
SpeI ACTAGT 1 cut(s) 692
Sse9I AATT 2 cut(s) 524, 1077
SsiI CCGC 6 cut(s) 51, 115, 205, 268, 452, 835
SspDI GGCGCC 1 cut(s) 248
SspMI CTAG 1 cut(s) 693
StyD4I CCNGG 3 cut(s) 132, 150, 718
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 1 cut(s) 1095
TaiI ACGT 2 cut(s) 199, 345
TaqI TCGA 5 cut(s) 558, 576, 585, 590, 866
TasI AATT 2 cut(s) 524, 1077
TatI WGTACW 1 cut(s) 677
TfiI GAWTC 2 cut(s) 587, 884
TscAI CASTG 3 cut(s) 1011, 1067, 1072
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 7 cut(s) 207, 367, 449, 741, 766, 769, 844
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 3 cut(s) 488, 562, 594
TspGWI ACGGA 3 cut(s) 136, 308, 828
TspRI CASTG 3 cut(s) 1011, 1067, 1072
Tth111I GACNNNGTC 1 cut(s) 410
Van91I CCANNNNNTGG 1 cut(s) 328
VneI GTGCAC 2 cut(s) 289, 688
VpaK11BI GGWCC 2 cut(s) 74, 535
XapI RAATTY 1 cut(s) 524
XceI RCATGY 1 cut(s) 759
XcmI CCANNNNNNNNNTGG 1 cut(s) 1003
XmiI GTMKAC 1 cut(s) 345
XspI CTAG 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.