pycom14g13940

BTB POZ and TAZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0005023
Physical Location & Seq
Reverse (-)
16746828 .. 16748936
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g13940.1

Sequence Viewer

Length: 444 bp
ATGGAGTGCTTGGAGCACATATGCAAGGAAGGTTGCACAAGTGTTGGACCCTACGACATGGAGCCAGGTCACAAGAGGGGCCCATGCAGCAAGTTTTCCACGTGTCAAGGACTCCAGATGCTGTTCCAGCACTTCGCCACGTGTAAACGGAGGGTGAATGGAGGGTGCTTGCGTTGCAAGCGCATGTGGCAGCTTCTTAAGCTTCACTCTTCAATGTGCGACGAACCTGATTCTTGCAGAGTCCCTCTGTGCAGGCAATTCAAGTTGAAAATGCAGCAAGAGAAAAAGAGAGACGAGGCCAGGTGGAAACTGCTTGTGAAGAAGGTGGTGTCGGCCAAAACCATATCTTCCCTGTCTCTGCCAAAGAGGAAGAGGGAGGAAGAATTAGGAGAAGCAAGAAGCACGACTCCTCCTCCTAATGGAATTAGAAGTTTCAGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009737 GO:0009738 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010167 GO:0010182 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045935 GO:0046677 GO:0048229 GO:0048511 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051246 GO:0051252 GO:0051338 GO:0051347 GO:0051603 GO:0051716 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071365 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0097305 GO:0097306 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700 GO:1901701 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2000278 GO:2000573 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04340 ko04341 map04340 map04341
Pfam Domains
Protein Families
BTB zf-TAZ

Protein Analysis

148

Amino Acids

16.96

Weight (kDa)

9.63

Isoelectric Point (pI)

68.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-TAZ PF02135 1 - 84 1.4e-11 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 333
AcvI CACGTG 2 cut(s) 102, 141
AfiI CCNNNNNNNGG 1 cut(s) 419
AflII CTTAAG 1 cut(s) 197
AflIII ACRYGT 2 cut(s) 101, 140
AgsI TTSAA 3 cut(s) 213, 262, 268
AjnI CCWGG 2 cut(s) 64, 299
AluBI AGCT 2 cut(s) 193, 202
AluI AGCT 2 cut(s) 193, 202
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 2 cut(s) 285, 360
AlwNI CAGNNNCTG 1 cut(s) 121
AoxI GGCC 3 cut(s) 79, 297, 333
ApaI GGGCCC 1 cut(s) 83
ApeKI GCWGC 3 cut(s) 87, 190, 274
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 3 cut(s) 47, 79, 80
AsuHPI GGTGA 1 cut(s) 166
AvaII GGWCC 1 cut(s) 47
BaeGI GKGCMC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 83
BbrPI CACGTG 2 cut(s) 102, 141
Bbv12I GWGCWC 1 cut(s) 18
BbvI GCAGC 3 cut(s) 99, 202, 286
BciT130I CCWGG 2 cut(s) 66, 301
BcoDI GTCTC 2 cut(s) 285, 360
BfrI CTTAAG 1 cut(s) 197
BisI GCNGC 3 cut(s) 88, 191, 275
BlsI GCNGC 3 cut(s) 89, 192, 276
Bme1390I CCNGG 2 cut(s) 66, 301
Bme18I GGWCC 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 47, 79, 80
BmiI GGNNCC 4 cut(s) 49, 63, 80, 81
BmrFI CCNGG 2 cut(s) 66, 301
BmsI GCATC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 98
BsaAI YACGTR 2 cut(s) 102, 141
BsaXI ACNNNNNCTCC 4 cut(s) 394, 397, 424, 427
Bsc4I CCNNNNNNNGG 1 cut(s) 419
BseBI CCWGG 2 cut(s) 66, 301
BseLI CCNNNNNNNGG 1 cut(s) 419
BseRI GAGGAG 2 cut(s) 399, 402
BseSI GKGCMC 1 cut(s) 83
BseXI GCAGC 3 cut(s) 99, 202, 286
BsgI GTGCAG 1 cut(s) 271
BshFI GGCC 3 cut(s) 81, 299, 335
BsiHKAI GWGCWC 1 cut(s) 18
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 1 cut(s) 419
BsmAI GTCTC 2 cut(s) 285, 360
BsmBI CGTCTC 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 227
BsnI GGCC 3 cut(s) 81, 299, 335
Bsp120I GGGCCC 1 cut(s) 79
Bsp1286I GDGCHC 2 cut(s) 18, 83
BspANI GGCC 3 cut(s) 81, 299, 335
BspLI GGNNCC 4 cut(s) 49, 63, 80, 81
BspTI CTTAAG 1 cut(s) 197
Bst2UI CCWGG 2 cut(s) 66, 301
Bst6I CTCTTC 2 cut(s) 214, 365
BstAFI CTTAAG 1 cut(s) 197
BstBAI YACGTR 2 cut(s) 102, 141
BstC8I GCNNGC 3 cut(s) 170, 179, 254
BstHHI GCGC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 285, 360
BstMWI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
BstNI CCWGG 2 cut(s) 66, 301
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 2 cut(s) 64, 299
BstSLI GKGCMC 1 cut(s) 83
BstV1I GCAGC 3 cut(s) 99, 202, 286
BsuRI GGCC 3 cut(s) 81, 299, 335
Cac8I GCNNGC 3 cut(s) 170, 179, 254
CaiI CAGNNNCTG 1 cut(s) 121
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 3 cut(s) 47, 79, 80
CviAII CATG 3 cut(s) 58, 84, 184
CviJI RGCY 6 cut(s) 64, 81, 193, 202, 299, 335
CviKI_1 RGCY 6 cut(s) 64, 81, 193, 202, 299, 335
EaeI YGGCCR 1 cut(s) 333
Eam1104I CTCTTC 2 cut(s) 214, 365
EarI CTCTTC 2 cut(s) 214, 365
Eco24I GRGCYC 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 47
Eco72I CACGTG 2 cut(s) 102, 141
EcoO109I RGGNCCY 1 cut(s) 79
EcoRII CCWGG 2 cut(s) 64, 299
EcoT38I GRGCYC 1 cut(s) 83
Esp3I CGTCTC 1 cut(s) 285
FaeI CATG 3 cut(s) 61, 87, 187
FaiI YATR 6 cut(s) 20, 22, 59, 85, 185, 344
FaqI GGGAC 1 cut(s) 227
FatI CATG 3 cut(s) 57, 83, 183
FauNDI CATATG 1 cut(s) 20
Fnu4HI GCNGC 3 cut(s) 88, 191, 275
FriOI GRGCYC 1 cut(s) 83
Fsp4HI GCNGC 3 cut(s) 88, 191, 275
GlaI GCGC 1 cut(s) 182
GluI GCNGC 3 cut(s) 88, 191, 275
GsuI CTGGAG 1 cut(s) 98
HaeIII GGCC 3 cut(s) 81, 299, 335
HhaI GCGC 1 cut(s) 183
Hin1II CATG 3 cut(s) 61, 87, 187
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 200
HinfI GANTC 4 cut(s) 111, 230, 240, 406
HphI GGTGA 1 cut(s) 166
Hpy166II GTNNAC 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 437
Hpy188III TCNNGA 1 cut(s) 115
Hpy8I GTNNAC 1 cut(s) 146
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 2 cut(s) 23, 316
HpyCH4IV ACGT 2 cut(s) 101, 140
HpyCH4V TGCA 7 cut(s) 24, 36, 87, 177, 237, 252, 274
HpyF10VI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
HpySE526I ACGT 2 cut(s) 101, 140
Hsp92II CATG 3 cut(s) 61, 87, 187
HspAI GCGC 1 cut(s) 181
LmnI GCTCC 2 cut(s) 13, 61
LpnPI CCDG 9 cut(s) 51, 78, 128, 140, 238, 240, 286, 313, 365
Lsp1109I GCAGC 3 cut(s) 99, 202, 286
LweI GCATC 1 cut(s) 108
MaeII ACGT 2 cut(s) 101, 140
MaeIII GTNAC 1 cut(s) 68
MboII GAAGA 5 cut(s) 201, 331, 339, 382, 392
MhlI GDGCHC 2 cut(s) 18, 83
MluCI AATT 3 cut(s) 257, 383, 423
MlyI GAGTC 3 cut(s) 105, 249, 400
MmeI TCCRAC 1 cut(s) 25
MseI TTAA 1 cut(s) 198
MspCI CTTAAG 1 cut(s) 197
MspR9I CCNGG 2 cut(s) 66, 301
MvaI CCWGG 2 cut(s) 66, 301
MwoI GCNNNNNNNGC 6 cut(s) 87, 127, 174, 178, 187, 199
NdeI CATATG 1 cut(s) 20
NlaIII CATG 3 cut(s) 61, 87, 187
NlaIV GGNNCC 4 cut(s) 49, 63, 80, 81
NmuCI GTSAC 1 cut(s) 68
NspI RCATGY 1 cut(s) 187
PfeI GAWTC 1 cut(s) 230
PkrI GCNGC 3 cut(s) 89, 192, 276
PleI GAGTC 3 cut(s) 105, 248, 400
PmaCI CACGTG 2 cut(s) 102, 141
PmlI CACGTG 2 cut(s) 102, 141
PpsI GAGTC 3 cut(s) 105, 248, 400
Ppu21I YACGTR 2 cut(s) 102, 141
Psp6I CCWGG 2 cut(s) 64, 299
PspCI CACGTG 2 cut(s) 102, 141
PspGI CCWGG 2 cut(s) 64, 299
PspN4I GGNNCC 4 cut(s) 49, 63, 80, 81
PspOMI GGGCCC 1 cut(s) 79
PspPI GGNCC 3 cut(s) 47, 79, 80
PstNI CAGNNNCTG 1 cut(s) 121
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 3 cut(s) 88, 191, 275
Sau96I GGNCC 3 cut(s) 47, 79, 80
SchI GAGTC 3 cut(s) 105, 249, 400
ScrFI CCNGG 2 cut(s) 66, 301
SduI GDGCHC 2 cut(s) 18, 83
SetI ASST 9 cut(s) 34, 70, 104, 143, 195, 204, 229, 305, 327
SfaNI GCATC 1 cut(s) 108
SinI GGWCC 1 cut(s) 47
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
Sse9I AATT 3 cut(s) 257, 383, 423
StyD4I CCNGG 2 cut(s) 64, 299
TaiI ACGT 2 cut(s) 104, 143
TasI AATT 3 cut(s) 257, 383, 423
TfiI GAWTC 1 cut(s) 230
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseFI GTSAC 1 cut(s) 68
TseI GCWGC 3 cut(s) 87, 190, 274
Tsp45I GTSAC 1 cut(s) 68
TspGWI ACGGA 1 cut(s) 163
Vha464I CTTAAG 1 cut(s) 197
VpaK11BI GGWCC 1 cut(s) 47
XceI RCATGY 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.