AT3G54090

Fructokinase-like 1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
20028052 .. 20030055
2004 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G54090.1

Sequence Viewer

Length: 1416 bp
ATGGCTTCACTTCTTATTTTCCCCCACCTTCACCATTTTGATTCTTCACTGGACCGTAGAGAGGTACTAGTAGTTCGCCATTCACAAGCATCAAGGCGATTTCTCACTCCGAAAGCTTCAATTAATGGCAGCGGAATCACAAACGGAGCTGCAGCGGAAACCACCTCTAAACCTAGTCGCAAAGGGAGGAAGAAGAAGCAAACATCGACGGTAATTGAGAAAGATAACACCGAGACTGATCCTGAATTGAATCCGGAGTTAGCTGATTACGACGACGGGATCGAGTTTCCGTACGACGATCCGCCTCTTGTGTGTTGCTTCGGAGCTGTACAGAAGGAGTTTGTTCCGGTGGTGCGAGTCCATGATAATCCGATGCATCCTGATATGTACTCGCAGTGGAAGATGCTACAGTGGGATCCACCGGAGTTTGGGAGAGCTCCGGGAGGTCCGCCGTCGAATGTGGCGATCTCTCATGTACGGTTAGGTGGGAGAGCTGCGTTTATGGGGAAAGTAGGTGAAGATGATTTTGGAGATGAGCTTGTTCTGATGATGAATCAGGAGAGAGTTCAGACGAGAGCTGTGAAATTCGATGAGAATTCGAAAACTGCTTGTACTCGTGTCAAGATCAAGTTTAAGGACGGGAAAATGATGGCGGAGACTGTGAAAGAACCACCTGAGGACTCGCTATTTGCTTCAGAACTCAATTTAGCTGTGCTTAAAGAGGCGAGGATTTTTCATTTCAATTCAGAAGTGTTGACGTCTCCTACAATGCAATCAACTCTTTTTACGGCAATACAATGGTCTAAGAAGTTTGGTGGGCTTATTTTCTTTGACTTGAATCTCCCATTACCGCTGTGGAGATCGCGCAATGAGACTAGGAAGTTGATCAAGAAAGCATGGAATGAAGCAAACATCATTGAAGTTTCACAGCAAGAGCTTGAGTTTCTACTTGATGAAGATTACTACGAGAGGAGAAGAAACTACACACCACAGTACTTCGCTGAGGATTTTGATCAGACGAAAAACAGAAGAGACTATTACCATTACACACCAGAGGAAATCAAGTCATTGTGGCATGACAAGCTGAAGCTACTGGTTGTGACTGATGGAACACTTCGGCTTCATTACTATACTCCTACTTTTGATGGTGTTGTGATTGGAACAGAAGATGTGCTTATAACTCCTTTCACCTGTGATAGGACAGGTTCTGGTGATGCTGTTGTTGCAGGGATAATGAGAAAGCTAACAACTTGTCCTGAGATGTTTGAGGATCAGGATGTGATGGAGCGACAGCTCAGGTTTGCAGTTGCTGCTGGGATCATAGCGCAGTGGACAATTGGTGCAGTTAGAGGTTTCCCTACTGAAAGCGCGACACAGAATTTGAAAGAACAAGTTTATGTTCCATCAATGTGGTAG

Protein Analysis

471

Amino Acids

53.78

Weight (kDa)

5.77

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 134 - 443 2.9e-27 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0016665)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54090
fragaria_vesca FvH4_6g12270
malus_domestica MD12G1158400.v1.1
prunus_persica Prupe.6G268800_v2.0.a1
pyrus_communis pycom12g15040
rosa_chinensis RchiOBHm_Chr3g0464071
rosa_laevigata RLG00000024724
rosa_multiflora Rmu_sc0006492.1_g000020
rosa_roxburghii Rroxscaffold_6G00416020
rosa_rugosa Rorug03G0070600
rosa_samantha Rh3BG131700 Rh3CG134000 Rh3DG133000
rosa_wichuraiana Rw3G010770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
AatII GACGTC 1 cut(s) 761
AccII CGCG 2 cut(s) 865, 1370
AccIII TCCGGA 1 cut(s) 253
AciI CCGC 6 cut(s) 132, 155, 302, 449, 653, 851
AclWI GGATC 7 cut(s) 233, 287, 293, 410, 423, 1278, 1325
AcsI RAATTY 3 cut(s) 584, 595, 1378
AcuI CTGAAG 2 cut(s) 678, 1106
AcyI GRCGYC 1 cut(s) 758
AfaI GTAC 7 cut(s) 66, 293, 330, 389, 477, 613, 995
AfiI CCNNNNNNNGG 3 cut(s) 61, 428, 1197
AgsI TTSAA 6 cut(s) 120, 250, 742, 838, 920, 1384
AhlI ACTAGT 1 cut(s) 67
AjuI GAANNNNNNNTTGG 2 cut(s) 510, 542
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 5 cut(s) 227, 650, 765, 866, 1026
AlwI GGATC 7 cut(s) 233, 287, 293, 410, 423, 1278, 1325
AlwNI CAGNNNCTG 2 cut(s) 1208, 1310
Aor13HI TCCGGA 1 cut(s) 253
ApeKI GCWGC 5 cut(s) 129, 149, 152, 494, 1310
ApoI RAATTY 3 cut(s) 584, 595, 1378
ArsI GACNNNNNNTTYG 4 cut(s) 671, 703, 1363, 1395
AseI ATTAAT 1 cut(s) 123
AspLEI GCGC 3 cut(s) 867, 1327, 1370
AspS9I GGNCC 2 cut(s) 52, 446
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 4 cut(s) 23, 527, 1180, 1223
AsuII TTCGAA 1 cut(s) 599
AvaII GGWCC 2 cut(s) 52, 446
AxyI CCTNAGG 1 cut(s) 675
BamHI GGATCC 1 cut(s) 415
BanII GRGCYC 1 cut(s) 439
BauI CACGAG 1 cut(s) 615
Bbv12I GWGCWC 1 cut(s) 439
BbvCI CCTCAGC 1 cut(s) 1002
BbvI GCAGC 5 cut(s) 136, 141, 164, 481, 1297
BccI CCATC 5 cut(s) 643, 1100, 1139, 1276, 1411
BceAI ACGGC 2 cut(s) 436, 804
BclI TGATCA 2 cut(s) 885, 1012
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 5 cut(s) 227, 650, 765, 866, 1026
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 3 cut(s) 68, 174, 876
BfmI CTRYAG 2 cut(s) 150, 407
BisI GCNGC 5 cut(s) 130, 150, 153, 495, 1311
BlsI GCNGC 5 cut(s) 131, 151, 154, 496, 1312
BmcAI AGTACT 1 cut(s) 995
Bme1390I CCNGG 1 cut(s) 441
Bme18I GGWCC 2 cut(s) 52, 446
BmgT120I GGNCC 2 cut(s) 52, 446
BmiI GGNNCC 1 cut(s) 417
BmrFI CCNGG 1 cut(s) 441
BmsI GCATC 5 cut(s) 98, 363, 385, 393, 1204
Bpu10I CCTNAGC 2 cut(s) 1002, 1295
Bpu14I TTCGAA 1 cut(s) 599
BpuEI CTTGAG 1 cut(s) 959
BpuMI CCSGG 1 cut(s) 441
BsaBI GATNNNNATC 1 cut(s) 1011
BsaHI GRCGYC 1 cut(s) 758
BsaWI WCCGGW 3 cut(s) 253, 346, 421
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 428, 1197
Bse1I ACTGG 2 cut(s) 54, 1098
Bse21I CCTNAGG 1 cut(s) 675
Bse3DI GCAATG 1 cut(s) 874
Bse8I GATNNNNATC 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 253
BseGI GGATG 2 cut(s) 376, 1282
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 3 cut(s) 61, 428, 1197
BseMI GCAATG 1 cut(s) 874
BseMII CTCAG 4 cut(s) 666, 993, 1248, 1309
BseNI ACTGG 2 cut(s) 54, 1098
BseRI GAGGAG 1 cut(s) 985
BseXI GCAGC 5 cut(s) 136, 141, 164, 481, 1297
BseYI CCCAGC 1 cut(s) 1313
BsgI GTGCAG 1 cut(s) 1362
Bsh1236I CGCG 2 cut(s) 865, 1370
BsiHKAI GWGCWC 1 cut(s) 439
BsiSI CCGG 4 cut(s) 254, 347, 422, 440
BsiWI CGTACG 1 cut(s) 291
BslI CCNNNNNNNGG 3 cut(s) 61, 428, 1197
BsmAI GTCTC 5 cut(s) 227, 650, 765, 866, 1026
BsmBI CGTCTC 1 cut(s) 765
Bsp119I TTCGAA 1 cut(s) 599
Bsp1286I GDGCHC 1 cut(s) 439
Bsp13I TCCGGA 1 cut(s) 253
Bsp1407I TGTACA 1 cut(s) 328
BspACI CCGC 6 cut(s) 132, 155, 302, 449, 653, 851
BspCNI CTCAG 4 cut(s) 667, 994, 1249, 1308
BspEI TCCGGA 1 cut(s) 253
BspFNI CGCG 2 cut(s) 865, 1370
BspLI GGNNCC 1 cut(s) 417
BspMAI CTGCAG 1 cut(s) 154
BspPI GGATC 7 cut(s) 233, 287, 293, 410, 423, 1278, 1325
BspT104I TTCGAA 1 cut(s) 599
BsrDI GCAATG 1 cut(s) 874
BsrGI TGTACA 1 cut(s) 328
BsrI ACTGG 2 cut(s) 54, 1098
BssNI GRCGYC 1 cut(s) 758
BssSI CACGAG 1 cut(s) 615
Bst2BI CACGAG 1 cut(s) 615
Bst4CI ACNGT 6 cut(s) 56, 211, 411, 480, 661, 993
Bst6I CTCTTC 1 cut(s) 1024
BstACI GRCGYC 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstAUI TGTACA 1 cut(s) 328
BstBI TTCGAA 1 cut(s) 599
BstDEI CTNAG 5 cut(s) 675, 804, 1002, 1257, 1295
BstENI CCTNNNNNAGG 1 cut(s) 1195
BstF5I GGATG 2 cut(s) 376, 1282
BstFNI CGCG 2 cut(s) 865, 1370
BstHHI GCGC 3 cut(s) 867, 1327, 1370
BstMAI GTCTC 5 cut(s) 227, 650, 765, 866, 1026
BstMWI GCNNNNNNNGC 3 cut(s) 1081, 1223, 1310
BstSCI CCNGG 1 cut(s) 439
BstSFI CTRYAG 2 cut(s) 150, 407
BstUI CGCG 2 cut(s) 865, 1370
BstV1I GCAGC 5 cut(s) 136, 141, 164, 481, 1297
BstX2I RGATCY 1 cut(s) 415
BstXI CCANNNNNNTGG 1 cut(s) 1410
BstYI RGATCY 1 cut(s) 415
Bsu36I CCTNAGG 1 cut(s) 675
BtsCI GGATG 2 cut(s) 376, 1282
BtsI GCAGTG 2 cut(s) 401, 1334
BtsIMutI CAGTG 4 cut(s) 47, 401, 416, 1334
CaiI CAGNNNCTG 2 cut(s) 1208, 1310
CfoI GCGC 3 cut(s) 867, 1327, 1370
Cfr13I GGNCC 2 cut(s) 52, 446
Csp6I GTAC 7 cut(s) 65, 292, 329, 388, 476, 612, 994
CviAII CATG 4 cut(s) 362, 473, 897, 1076
CviQI GTAC 7 cut(s) 65, 292, 329, 388, 476, 612, 994
DdeI CTNAG 5 cut(s) 675, 804, 1002, 1257, 1295
Eam1104I CTCTTC 1 cut(s) 1024
EarI CTCTTC 1 cut(s) 1024
EciI GGCGGA 3 cut(s) 291, 438, 668
Ecl136II GAGCTC 1 cut(s) 437
Eco24I GRGCYC 1 cut(s) 439
Eco47I GGWCC 2 cut(s) 52, 446
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 2 cut(s) 678, 1106
Eco81I CCTNAGG 1 cut(s) 675
EcoICRI GAGCTC 1 cut(s) 437
EcoNI CCTNNNNNAGG 1 cut(s) 1195
EcoRI GAATTC 1 cut(s) 595
EcoT22I ATGCAT 1 cut(s) 378
EcoT38I GRGCYC 1 cut(s) 439
Esp3I CGTCTC 1 cut(s) 765
FaeI CATG 4 cut(s) 365, 476, 900, 1079
FalI AAGNNNNNCTT 2 cut(s) 1158, 1190
FatI CATG 4 cut(s) 361, 472, 896, 1075
FbaI TGATCA 2 cut(s) 885, 1012
Fnu4HI GCNGC 5 cut(s) 130, 150, 153, 495, 1311
FokI GGATG 2 cut(s) 363, 1289
FriOI GRGCYC 1 cut(s) 439
Fsp4HI GCNGC 5 cut(s) 130, 150, 153, 495, 1311
FspBI CTAG 3 cut(s) 68, 174, 876
GlaI GCGC 3 cut(s) 866, 1326, 1369
GluI GCNGC 5 cut(s) 130, 150, 153, 495, 1311
GsaI CCCAGC 1 cut(s) 1317
HapII CCGG 4 cut(s) 254, 347, 422, 440
HhaI GCGC 3 cut(s) 867, 1327, 1370
Hin1I GRCGYC 1 cut(s) 758
Hin1II CATG 4 cut(s) 365, 476, 900, 1079
Hin6I GCGC 3 cut(s) 865, 1325, 1368
HinP1I GCGC 3 cut(s) 865, 1325, 1368
HincII GTYRAC 1 cut(s) 756
HindII GTYRAC 1 cut(s) 756
HindIII AAGCTT 1 cut(s) 114
HinfI GANTC 7 cut(s) 41, 135, 250, 357, 553, 680, 838
HpaII CCGG 4 cut(s) 254, 347, 422, 440
HphI GGTGA 4 cut(s) 23, 527, 1180, 1223
Hpy166II GTNNAC 2 cut(s) 756, 1332
Hpy188I TCNGA 8 cut(s) 111, 323, 372, 546, 570, 697, 748, 1017
Hpy188III TCNNGA 8 cut(s) 242, 254, 380, 557, 622, 889, 1256, 1274
Hpy8I GTNNAC 2 cut(s) 756, 1332
Hpy99I CGWCG 5 cut(s) 211, 275, 278, 299, 457
HpyAV CCTTC 2 cut(s) 38, 328
HpyCH4III ACNGT 6 cut(s) 56, 211, 411, 480, 661, 993
HpyCH4IV ACGT 1 cut(s) 758
HpyCH4V TGCA 6 cut(s) 152, 376, 772, 1226, 1304, 1343
HpyF10VI GCNNNNNNNGC 3 cut(s) 1081, 1223, 1310
HpyF3I CTNAG 5 cut(s) 675, 804, 1002, 1257, 1295
HpySE526I ACGT 1 cut(s) 758
Hsp92I GRCGYC 1 cut(s) 758
Hsp92II CATG 4 cut(s) 365, 476, 900, 1079
HspAI GCGC 3 cut(s) 865, 1325, 1368
Kpn2I TCCGGA 1 cut(s) 253
Ksp22I TGATCA 2 cut(s) 885, 1012
LmnI GCTCC 4 cut(s) 146, 323, 442, 1285
Lsp1109I GCAGC 5 cut(s) 136, 141, 164, 481, 1297
LweI GCATC 5 cut(s) 98, 363, 385, 393, 1204
MaeI CTAG 3 cut(s) 68, 174, 876
MaeII ACGT 1 cut(s) 758
MaeIII GTNAC 1 cut(s) 1099
MboII GAAGA 9 cut(s) 36, 202, 205, 412, 530, 968, 987, 1041, 1178
MfeI CAATTG 1 cut(s) 1335
MflI RGATCY 1 cut(s) 415
MhlI GDGCHC 1 cut(s) 439
MluCI AATT 9 cut(s) 120, 213, 245, 584, 595, 703, 742, 1335, 1378
MlyI GAGTC 2 cut(s) 366, 674
Mph1103I ATGCAT 1 cut(s) 378
MroI TCCGGA 1 cut(s) 253
MseI TTAA 3 cut(s) 123, 633, 717
MslI CAYNNNNRTG 1 cut(s) 1408
MspA1I CMGCKG 3 cut(s) 132, 155, 853
MspI CCGG 4 cut(s) 254, 347, 422, 440
MspR9I CCNGG 1 cut(s) 441
MunI CAATTG 1 cut(s) 1335
MvnI CGCG 2 cut(s) 865, 1370
MwoI GCNNNNNNNGC 3 cut(s) 1081, 1223, 1310
NciI CCSGG 1 cut(s) 441
NlaIII CATG 4 cut(s) 365, 476, 900, 1079
NlaIV GGNNCC 1 cut(s) 417
NmuCI GTSAC 1 cut(s) 1099
NsiI ATGCAT 1 cut(s) 378
NspV TTCGAA 1 cut(s) 599
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 461
PfeI GAWTC 5 cut(s) 41, 135, 250, 553, 838
Pfl23II CGTACG 1 cut(s) 291
PfoI TCCNGGA 1 cut(s) 439
PkrI GCNGC 5 cut(s) 131, 151, 154, 496, 1312
PleI GAGTC 2 cut(s) 365, 674
PpsI GAGTC 2 cut(s) 365, 674
PshBI ATTAAT 1 cut(s) 123
PsiI TTATAA 1 cut(s) 1178
Psp124BI GAGCTC 1 cut(s) 439
PspFI CCCAGC 1 cut(s) 1313
PspLI CGTACG 1 cut(s) 291
PspN4I GGNNCC 1 cut(s) 417
PspPI GGNCC 2 cut(s) 52, 446
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
PstI CTGCAG 1 cut(s) 154
PstNI CAGNNNCTG 2 cut(s) 1208, 1310
PsuI RGATCY 1 cut(s) 415
RsaI GTAC 7 cut(s) 66, 293, 330, 389, 477, 613, 995
RsaNI GTAC 7 cut(s) 65, 292, 329, 388, 476, 612, 994
RseI CAYNNNNRTG 1 cut(s) 1408
SacI GAGCTC 1 cut(s) 439
SaqAI TTAA 3 cut(s) 123, 633, 717
SatI GCNGC 5 cut(s) 130, 150, 153, 495, 1311
Sau96I GGNCC 2 cut(s) 52, 446
ScaI AGTACT 1 cut(s) 995
SchI GAGTC 2 cut(s) 366, 674
ScrFI CCNGG 1 cut(s) 441
SduI GDGCHC 1 cut(s) 439
SfaNI GCATC 5 cut(s) 98, 363, 385, 393, 1204
SfcI CTRYAG 2 cut(s) 150, 407
SfuI TTCGAA 1 cut(s) 599
SinI GGWCC 2 cut(s) 52, 446
SmiMI CAYNNNNRTG 1 cut(s) 1408
SmlI CTYRAG 1 cut(s) 938
SmoI CTYRAG 1 cut(s) 938
SpeI ACTAGT 1 cut(s) 67
Sse9I AATT 9 cut(s) 120, 213, 245, 584, 595, 703, 742, 1335, 1378
SsiI CCGC 6 cut(s) 132, 155, 302, 449, 653, 851
SspMI CTAG 3 cut(s) 68, 174, 876
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 1 cut(s) 439
TaaI ACNGT 6 cut(s) 56, 211, 411, 480, 661, 993
TaiI ACGT 1 cut(s) 761
TaqI TCGA 5 cut(s) 206, 282, 455, 588, 599
TasI AATT 9 cut(s) 120, 213, 245, 584, 595, 703, 742, 1335, 1378
TatI WGTACW 4 cut(s) 328, 387, 611, 993
TfiI GAWTC 5 cut(s) 41, 135, 250, 553, 838
Tru1I TTAA 3 cut(s) 123, 633, 717
Tru9I TTAA 3 cut(s) 123, 633, 717
TscAI CASTG 4 cut(s) 54, 401, 416, 1334
TseFI GTSAC 1 cut(s) 1099
TseI GCWGC 5 cut(s) 129, 149, 152, 494, 1310
Tsp45I GTSAC 1 cut(s) 1099
TspDTI ATGAA 5 cut(s) 566, 725, 918, 969, 1112
TspGWI ACGGA 2 cut(s) 159, 279
TspRI CASTG 4 cut(s) 54, 401, 416, 1334
VpaK11BI GGWCC 2 cut(s) 52, 446
VspI ATTAAT 1 cut(s) 123
XagI CCTNNNNNAGG 1 cut(s) 1195
XapI RAATTY 3 cut(s) 584, 595, 1378
XcmI CCANNNNNNNNNTGG 1 cut(s) 852
XspI CTAG 3 cut(s) 68, 174, 876
ZraI GACGTC 1 cut(s) 759
ZrmI AGTACT 1 cut(s) 995
Zsp2I ATGCAT 1 cut(s) 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.