Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010257

Physical Location & Seq

Genomic Coordinates Forward (+)

21666082 .. 21668625

Gene Structure 2544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGAGCCTCAGCTGTGGAGATCTCGCCAATCACAACGATCGTGTAGTTAGCTTACTCAATGTCTGCAGAAAAGCTCCTTCCTTTGCAAGGACCAAAGCTCTTCACGCTCTCTCCATCACTTTATGCTCTGTTCTTTTGCAGCCAGTTTATGTCTGCAATAACATTATCAGTCTTTATGAGAAGCTTGGCGAGGTATCACTTGCAGGCAAAGTGTTTGATCAAATGCCTGAGAGAAATAAAGTGTCTTTCAACACGATCATTAAAGGGTACAGCAAATACGGGGATGTTGATAAAGCTTGGGGTGTGTTCTCTGAGATGAGGTATTTTGGATATTTGCCGAACCAGTCAACAGTGAGTGGTTTATTGTCCTGTGCATCGTTGGATGTTCGTGCTGGAACTCAGTTGCACGGTTTGAGCTTGAAGTATGGCTTGTTTATGGCTGATGCATTTGTTGGTACTTGTTTGTTGTGTTTGTATGGGAGGCTTGACTTGCTGGAAATGGCGGAACAGGTTTTTGAAGATATGCCGTTTAAGAGCTTGGAAACATGGAACCATATGATGTCTTTGTTGGGGCATCGTGGTTTTCTCAAAGAATGCATGTTTTTCTTCCGTGAGCTTGTTAGGATGGGCGCTTCTTTAACTGAAAGCTCTTTCCTGGGTGTATTGAAGGGTGTATCTTGTGTAAAGGACTTGGATATTAGCAAACAGTTGCATTGCTCAGCAACGAAAAAAGGGTTAGATTGTGAAATATCCGTCGTTAACTCTCTCATCAGCGCATATGGAAAATGTGGCAATACGCATATGGCAGAGAGAATGTTTCAGGATGCAGGTTCCTGGGATATAGTGTCATGGAACGCCATAATTTGTGCAACAGCCAAAAGTGAGAACCCGTTAAAAGCACTCAAACTCTTTGTGAGTATGCCAGAGCATGGGTTTTCCCCGAACCAAGGTACATACGTTAGTGTTCTTGGTGTCTCTTCTCTTGTGCAGTTACTGAGTTGCGGACGCCAAATTCATGGCATGCTAATTAAGAATGGCTGCGAAACTGGCATAGTTTTGGGGAATGCGTTGATTGACTTTTATGCTAAATGTGGTAATCTGGAAGATTCCCGCCTATGCTTCGATTATATACGTGATAAGAACATTGTTTGTTGGAATGCGCTGCTTTCGGGTTATGCCAATAAGGATGGTCCGATTTGTCTCTCTTTGTTTCTGCAAATGCTTCAAATGGGTTTCAGGCCAACTGAATATACTTTTTCGACGGCCCTCAAATCTTGTTGTGTCACAGAGTTACAGCAGCTGCACTCTGTTATTGTGAGAATGGGATATGAAGATAATGACTATGTCTTAAGCTCTCTTATGAGATCCTACGCCAAAAATCAACTGATGAATGATGCTCTTCTTCTGCTGGATTGGGCTAGCGGGCCAACTTCGGTCGTCCCATTGAACATTGTTGCCGGAATCTATAGCAGAAGAGGCCAGTACCATGAATCTGTGAAGCTGATTTCGACACTAGAACAACCCGACACTGTATCTTGGAACATTGCAATTGCGGCCTGCTCTCGTTCTGATTACCATGAAGAGGTTATCGAACTTTTCAAACACATGCTTCAATCAAACATCCGCCCTGATAAGTACACATTCGTTAGTATCTTAAGTTTGTGTTCTAAGCTCTGTGACCTTACTCTTGGGAGTTCTATTCATGGTTTGATCACCAAAACAGATTTCAGCTGCGCTGACACATTTGTATGTAACGTACTAATTGACATGTATGGGAAATGCGGAAGCATTAGGAGTGTAATGAAAGTCTTTGAAGAAACAAGAGAGAAAAACCTCATTACATGGACGGCATTGATTTCGTGTCTTGGCATCCATGGATATGGACAGGAGGCACTTGAAAAGTTTAAGGAAACACTGTCTTTGGGTTTTAAGCCAGATCGTGTCTCGTTCATCTCTATTCTAACTGCTTGCAGACATGGTGGTATGGTAAAAGAAGGAATGGGTTTGTTTCAGAAAATGAAGGATTACGGTGTTGAACCAGAAATGGATCATTATCGTTGCGCCGTTGATCTTTTGGCAAGAAATGGTTACCTGAAGGAAGCTGAGCATCTGATTCGGGAAATGCCTTTCCCTGCAGATGCGCCTGTATGGCGTACATTTCTTGATGGTTGCAATAGATTTGCAGAAGAACAGAGAAACACTCTCAATGTCGTCTCTTTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

741

Amino Acids

82.69

Weight (kDa)

6.65

Isoelectric Point (pI)

37.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	78 - 107	1.1e-06	PPR repeat
PPR_2	PF13041	79 - 123	9.1e-11	PPR repeat family
PPR	PF01535	81 - 110	3.1e-07	PPR repeat
PPR_2	PF13041	280 - 323	2.7e-08	PPR repeat family
PPR_2	PF13041	380 - 427	2.3e-08	PPR repeat family
PPR_2	PF13041	508 - 556	8.9e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58590
fragaria_vesca	FvH4_6g27060 FvH4_6g27060 FvH4_6g27060 FvH4_6g27060 FvH4_6g27060 FvH4_6g27060 FvH4_6g27060
malus_domestica	MD16G1272700.v1.1 MD16G1273100.v1.1
prunus_persica	Prupe.5G034200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0128951
rosa_laevigata	RLG00000019042
rosa_multiflora	Rmu_sc0002696.1_g000005
rosa_roxburghii	Rroxscaffold_2G00115030
rosa_rugosa	Rorug02G0283400
rosa_samantha	Rh2AG335300 Rh2BG343400 Rh2CG322100 Rh2DG359900
rosa_wichuraiana	Rw2G027190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	818
AccB7I	CCANNNNNTGG	1 cut(s)	929
AciI	CCGC	7 cut(s)	503, 1002, 1111, 1422, 1553, 1624, 1782
AclWI	GGATC	2 cut(s)	1359, 2055
AcsI	RAATTY	1 cut(s)	1011
AcuI	CTGAAG	1 cut(s)	2114
AcyI	GRCGYC	1 cut(s)	1006
AfaI	GTAC	7 cut(s)	269, 457, 952, 1484, 1637, 1758, 2155
AfiI	CCNNNNNNNGG	4 cut(s)	87, 929, 947, 1582
AflII	CTTAAG	2 cut(s)	1348, 1654
AflIII	ACRYGT	1 cut(s)	1767
AjnI	CCWGG	2 cut(s)	654, 833
AjuI	GAANNNNNNNTTGG	2 cut(s)	1709, 1741
Alw26I	GTCTC	4 cut(s)	979, 1205, 1948, 2218
AlwI	GGATC	2 cut(s)	1359, 2055
AlwNI	CAGNNNCTG	2 cut(s)	994, 1300
AoxI	GGCC	5 cut(s)	1238, 1263, 1424, 1477, 1554
ApeKI	GCWGC	6 cut(s)	139, 1038, 1162, 1297, 1300, 1731
ApoI	RAATTY	1 cut(s)	1011
AspLEI	GCGC	6 cut(s)	632, 776, 1162, 1736, 2063, 2143
AspS9I	GGNCC	4 cut(s)	90, 1190, 1264, 1424
AsuHPI	GGTGA	1 cut(s)	1705
AsuNHI	GCTAGC	1 cut(s)	1418
AvaII	GGWCC	2 cut(s)	90, 1190
BaeI	ACNNNNGTAYC	2 cut(s)	942, 975
BbvCI	CCTCAGC	1 cut(s)	8
BbvI	GCAGC	6 cut(s)	151, 1025, 1149, 1287, 1309, 1718
BccI	CCATC	4 cut(s)	122, 619, 1181, 2159
BceAI	ACGGC	4 cut(s)	511, 1278, 1863, 2048
BcgI	CGANNNNNNTGC	4 cut(s)	1839, 1873, 2096, 2130
BciT130I	CCWGG	2 cut(s)	656, 835
BclI	TGATCA	2 cut(s)	217, 1710
BcoDI	GTCTC	4 cut(s)	979, 1205, 1948, 2218
BfaI	CTAG	2 cut(s)	1419, 1514
BfmI	CTRYAG	3 cut(s)	64, 1465, 2133
BfoI	RGCGCY	1 cut(s)	633
BfrI	CTTAAG	2 cut(s)	1348, 1654
BfuAI	ACCTGC	1 cut(s)	818
BglI	GCCNNNNNGGC	1 cut(s)	2149
BglII	AGATCT	1 cut(s)	19
BisI	GCNGC	7 cut(s)	140, 1039, 1163, 1298, 1301, 1554, 1732
BlpI	GCTNAGC	2 cut(s)	718, 2103
BlsI	GCNGC	7 cut(s)	141, 1040, 1164, 1299, 1302, 1555, 1733
Bme1390I	CCNGG	2 cut(s)	656, 835
Bme18I	GGWCC	2 cut(s)	90, 1190
BmgT120I	GGNCC	4 cut(s)	90, 1190, 1264, 1424
BmiI	GGNNCC	2 cut(s)	551, 832
BmrFI	CCNGG	2 cut(s)	656, 835
BmsI	GCATC	8 cut(s)	383, 433, 583, 814, 1384, 1878, 2116, 2128
BmtI	GCTAGC	1 cut(s)	1422
BplI	GAGNNNNNCTC	2 cut(s)	2185, 2217
Bpu10I	CCTNAGC	1 cut(s)	8
Bpu1102I	GCTNAGC	2 cut(s)	718, 2103
BsaAI	YACGTR	1 cut(s)	1133
BsaBI	GATNNNNATC	1 cut(s)	2052
BsaHI	GRCGYC	1 cut(s)	1006
BsaJI	CCNNGG	4 cut(s)	655, 834, 946, 1873
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	4 cut(s)	87, 929, 947, 1582
Bse1I	ACTGG	4 cut(s)	143, 343, 1051, 1480
Bse3DI	GCAATG	2 cut(s)	712, 1542
Bse8I	GATNNNNATC	1 cut(s)	2052
BseBI	CCWGG	2 cut(s)	656, 835
BseDI	CCNNGG	4 cut(s)	655, 834, 946, 1873
BseGI	GGATG	7 cut(s)	289, 388, 630, 829, 1192, 1620, 1869
BseJI	GATNNNNATC	1 cut(s)	2052
BseLI	CCNNNNNNNGG	4 cut(s)	87, 929, 947, 1582
BseMI	GCAATG	2 cut(s)	712, 1542
BseMII	CTCAG	7 cut(s)	22, 219, 303, 413, 732, 986, 2094
BseNI	ACTGG	4 cut(s)	143, 343, 1051, 1480
BseXI	GCAGC	6 cut(s)	151, 1025, 1149, 1287, 1309, 1718
BsgI	GTGCAG	2 cut(s)	1007, 1286
Bsh1285I	CGRYCG	2 cut(s)	40, 1437
BshFI	GGCC	5 cut(s)	1240, 1265, 1426, 1479, 1556
BsiEI	CGRYCG	2 cut(s)	40, 1437
BsiSI	CCGG	1 cut(s)	1458
BslFI	GGGAC	1 cut(s)	1424
BslI	CCNNNNNNNGG	4 cut(s)	87, 929, 947, 1582
BsmAI	GTCTC	4 cut(s)	979, 1205, 1948, 2218
BsmBI	CGTCTC	1 cut(s)	2218
BsmFI	GGGAC	1 cut(s)	1424
BsmI	GAATGC	3 cut(s)	599, 1069, 1162
BsnI	GGCC	5 cut(s)	1240, 1265, 1426, 1479, 1556
Bsp143I	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
Bsp1720I	GCTNAGC	2 cut(s)	718, 2103
Bsp19I	CCATGG	1 cut(s)	1873
BspACI	CCGC	7 cut(s)	503, 1002, 1111, 1422, 1553, 1624, 1782
BspANI	GGCC	5 cut(s)	1240, 1265, 1426, 1479, 1556
BspCNI	CTCAG	7 cut(s)	21, 220, 304, 412, 731, 987, 2095
BspLI	GGNNCC	2 cut(s)	551, 832
BspMAI	CTGCAG	2 cut(s)	68, 2137
BspMI	ACCTGC	1 cut(s)	818
BspOI	GCTAGC	1 cut(s)	1422
BspPI	GGATC	2 cut(s)	1359, 2055
BspQI	GCTCTTC	2 cut(s)	105, 1404
BspTI	CTTAAG	2 cut(s)	1348, 1654
BsrDI	GCAATG	2 cut(s)	712, 1542
BsrI	ACTGG	4 cut(s)	143, 343, 1051, 1480
BssECI	CCNNGG	4 cut(s)	655, 834, 946, 1873
BssMI	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
BssNI	GRCGYC	1 cut(s)	1006
BssT1I	CCWWGG	2 cut(s)	946, 1873
Bst2UI	CCWGG	2 cut(s)	656, 835
Bst4CI	ACNGT	6 cut(s)	352, 410, 708, 1531, 1917, 2030
Bst6I	CTCTTC	5 cut(s)	105, 982, 1404, 1468, 1575
BstACI	GRCGYC	1 cut(s)	1006
BstAFI	CTTAAG	2 cut(s)	1348, 1654
BstBAI	YACGTR	1 cut(s)	1133
BstC8I	GCNNGC	6 cut(s)	205, 1022, 1420, 1424, 1558, 1969
BstDEI	CTNAG	8 cut(s)	8, 228, 312, 399, 718, 995, 1668, 2103
BstDSI	CCRYGG	1 cut(s)	1873
BstEII	GGTNACC	1 cut(s)	2087
BstENI	CCTNNNNNAGG	1 cut(s)	85
BstF5I	GGATG	7 cut(s)	289, 388, 630, 829, 1192, 1620, 1869
BstH2I	RGCGCY	1 cut(s)	633
BstHHI	GCGC	6 cut(s)	632, 776, 1162, 1736, 2063, 2143
BstKTI	GATC	9 cut(s)	22, 40, 220, 258, 1367, 1713, 1939, 2050, 2071
BstMAI	GTCTC	4 cut(s)	979, 1205, 1948, 2218
BstMBI	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
BstMCI	CGRYCG	2 cut(s)	40, 1437
BstMWI	GCNNNNNNNGC	6 cut(s)	104, 490, 1047, 1476, 1553, 2149
BstNI	CCWGG	2 cut(s)	656, 835
BstNSI	RCATGY	4 cut(s)	601, 1024, 1609, 1771
BstPI	GGTNACC	1 cut(s)	2087
BstSCI	CCNGG	2 cut(s)	654, 833
BstSFI	CTRYAG	3 cut(s)	64, 1465, 2133
BstV1I	GCAGC	6 cut(s)	151, 1025, 1149, 1287, 1309, 1718
BstX2I	RGATCY	2 cut(s)	19, 1364
BstXI	CCANNNNNNTGG	2 cut(s)	1016, 1880
BstYI	RGATCY	2 cut(s)	19, 1364
BsuRI	GGCC	5 cut(s)	1240, 1265, 1426, 1479, 1556
BtgI	CCRYGG	1 cut(s)	1873
BtsCI	GGATG	7 cut(s)	289, 388, 630, 829, 1192, 1620, 1869
BtsIMutI	CAGTG	3 cut(s)	357, 1527, 1913
BveI	ACCTGC	1 cut(s)	818
Cac8I	GCNNGC	6 cut(s)	205, 1022, 1420, 1424, 1558, 1969
CaiI	CAGNNNCTG	2 cut(s)	994, 1300
CfoI	GCGC	6 cut(s)	632, 776, 1162, 1736, 2063, 2143
Cfr13I	GGNCC	4 cut(s)	90, 1190, 1264, 1424
CseI	GACGC	1 cut(s)	1014
Csp6I	GTAC	7 cut(s)	268, 456, 951, 1483, 1636, 1757, 2154
CviQI	GTAC	7 cut(s)	268, 456, 951, 1483, 1636, 1757, 2154
DdeI	CTNAG	8 cut(s)	8, 228, 312, 399, 718, 995, 1668, 2103
DpnI	GATC	9 cut(s)	21, 39, 219, 257, 1366, 1712, 1938, 2049, 2070
DpnII	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
Eam1104I	CTCTTC	5 cut(s)	105, 982, 1404, 1468, 1575
EarI	CTCTTC	5 cut(s)	105, 982, 1404, 1468, 1575
EciI	GGCGGA	2 cut(s)	518, 1613
Eco130I	CCWWGG	2 cut(s)	946, 1873
Eco47I	GGWCC	2 cut(s)	90, 1190
Eco57I	CTGAAG	1 cut(s)	2114
Eco91I	GGTNACC	1 cut(s)	2087
EcoNI	CCTNNNNNAGG	1 cut(s)	85
EcoO65I	GGTNACC	1 cut(s)	2087
EcoRII	CCWGG	2 cut(s)	654, 833
EcoT14I	CCWWGG	2 cut(s)	946, 1873
EcoT22I	ATGCAT	2 cut(s)	448, 599
ErhI	CCWWGG	2 cut(s)	946, 1873
Esp3I	CGTCTC	1 cut(s)	2218
FalI	AAGNNNNNCTT	2 cut(s)	413, 445
FaqI	GGGAC	1 cut(s)	1424
FauI	CCCGC	2 cut(s)	1118, 1415
FauNDI	CATATG	3 cut(s)	555, 778, 801
FbaI	TGATCA	2 cut(s)	217, 1710
Fnu4HI	GCNGC	7 cut(s)	140, 1039, 1163, 1298, 1301, 1554, 1732
FokI	GGATG	7 cut(s)	296, 395, 637, 836, 1199, 1607, 1856
Fsp4HI	GCNGC	7 cut(s)	140, 1039, 1163, 1298, 1301, 1554, 1732
FspBI	CTAG	2 cut(s)	1419, 1514
GlaI	GCGC	6 cut(s)	631, 775, 1161, 1735, 2062, 2142
GluI	GCNGC	7 cut(s)	140, 1039, 1163, 1298, 1301, 1554, 1732
HaeII	RGCGCY	1 cut(s)	633
HaeIII	GGCC	5 cut(s)	1240, 1265, 1426, 1479, 1556
HapII	CCGG	1 cut(s)	1458
HgaI	GACGC	1 cut(s)	1014
HhaI	GCGC	6 cut(s)	632, 776, 1162, 1736, 2063, 2143
Hin1I	GRCGYC	1 cut(s)	1006
Hin6I	GCGC	6 cut(s)	630, 774, 1160, 1734, 2061, 2141
HinP1I	GCGC	6 cut(s)	630, 774, 1160, 1734, 2061, 2141
HincII	GTYRAC	2 cut(s)	348, 760
HindII	GTYRAC	2 cut(s)	348, 760
HindIII	AAGCTT	2 cut(s)	182, 294
HinfI	GANTC	4 cut(s)	1106, 1461, 1490, 2113
HpaI	GTTAAC	1 cut(s)	760
HpaII	CCGG	1 cut(s)	1458
HphI	GGTGA	1 cut(s)	1705
Hpy166II	GTNNAC	3 cut(s)	348, 760, 1638
Hpy188I	TCNGA	5 cut(s)	313, 1194, 1570, 2013, 2112
Hpy188III	TCNNGA	4 cut(s)	821, 1100, 2117, 2162
Hpy8I	GTNNAC	3 cut(s)	348, 760, 1638
Hpy99I	CGWCG	2 cut(s)	758, 1264
HpyAV	CCTTC	5 cut(s)	87, 661, 1988, 2014, 2089
HpyCH4III	ACNGT	6 cut(s)	352, 410, 708, 1531, 1917, 2030
HpyCH4IV	ACGT	3 cut(s)	957, 1132, 1755
HpyF10VI	GCNNNNNNNGC	6 cut(s)	104, 490, 1047, 1476, 1553, 2149
HpyF3I	CTNAG	8 cut(s)	8, 228, 312, 399, 718, 995, 1668, 2103
HpySE526I	ACGT	3 cut(s)	957, 1132, 1755
Hsp92I	GRCGYC	1 cut(s)	1006
HspAI	GCGC	6 cut(s)	630, 774, 1160, 1734, 2061, 2141
Ksp22I	TGATCA	2 cut(s)	217, 1710
KspAI	GTTAAC	1 cut(s)	760
Kzo9I	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
LguI	GCTCTTC	2 cut(s)	105, 1404
LmnI	GCTCC	1 cut(s)	79
Lsp1109I	GCAGC	6 cut(s)	151, 1025, 1149, 1287, 1309, 1718
LweI	GCATC	8 cut(s)	383, 433, 583, 814, 1384, 1878, 2116, 2128
MaeI	CTAG	2 cut(s)	1419, 1514
MaeII	ACGT	3 cut(s)	957, 1132, 1755
MaeIII	GTNAC	6 cut(s)	990, 1282, 1290, 1676, 1751, 2087
MalI	GATC	9 cut(s)	21, 39, 219, 257, 1366, 1712, 1938, 2049, 2070
MboI	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
MfeI	CAATTG	1 cut(s)	1548
MflI	RGATCY	2 cut(s)	19, 1364
MluCI	AATT	5 cut(s)	861, 1011, 1026, 1548, 1761
MmeI	TCCRAC	2 cut(s)	360, 1133
MnlI	CCTC	9 cut(s)	17, 184, 312, 474, 1277, 1469, 1576, 1844, 1882
Mph1103I	ATGCAT	2 cut(s)	448, 599
MslI	CAYNNNNRTG	2 cut(s)	1747, 1878
MspA1I	CMGCKG	3 cut(s)	12, 1300, 1731
MspCI	CTTAAG	2 cut(s)	1348, 1654
MspI	CCGG	1 cut(s)	1458
MspR9I	CCNGG	2 cut(s)	656, 835
MunI	CAATTG	1 cut(s)	1548
Mva1269I	GAATGC	3 cut(s)	599, 1069, 1162
MvaI	CCWGG	2 cut(s)	656, 835
MwoI	GCNNNNNNNGC	6 cut(s)	104, 490, 1047, 1476, 1553, 2149
NcoI	CCATGG	1 cut(s)	1873
NdeI	CATATG	3 cut(s)	555, 778, 801
NdeII	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
NheI	GCTAGC	1 cut(s)	1418
NlaIV	GGNNCC	2 cut(s)	551, 832
NmuCI	GTSAC	2 cut(s)	1282, 1676
NsiI	ATGCAT	2 cut(s)	448, 599
NspI	RCATGY	4 cut(s)	601, 1024, 1609, 1771
PaeI	GCATGC	1 cut(s)	1024
PciI	ACATGT	1 cut(s)	1767
PciSI	GCTCTTC	2 cut(s)	105, 1404
PctI	GAATGC	3 cut(s)	599, 1069, 1162
PfeI	GAWTC	4 cut(s)	1106, 1461, 1490, 2113
PflFI	GACNNNGTC	1 cut(s)	1343
PflMI	CCANNNNNTGG	1 cut(s)	929
PkrI	GCNGC	7 cut(s)	141, 1040, 1164, 1299, 1302, 1555, 1733
Ple19I	CGATCG	1 cut(s)	40
Ppu21I	YACGTR	1 cut(s)	1133
PscI	ACATGT	1 cut(s)	1767
Psp6I	CCWGG	2 cut(s)	654, 833
PspEI	GGTNACC	1 cut(s)	2087
PspGI	CCWGG	2 cut(s)	654, 833
PspN4I	GGNNCC	2 cut(s)	551, 832
PspPI	GGNCC	4 cut(s)	90, 1190, 1264, 1424
PstI	CTGCAG	2 cut(s)	68, 2137
PstNI	CAGNNNCTG	2 cut(s)	994, 1300
PsuI	RGATCY	2 cut(s)	19, 1364
PsyI	GACNNNGTC	1 cut(s)	1343
PvuI	CGATCG	1 cut(s)	40
PvuII	CAGCTG	3 cut(s)	12, 1300, 1731
RsaI	GTAC	7 cut(s)	269, 457, 952, 1484, 1637, 1758, 2155
RsaNI	GTAC	7 cut(s)	268, 456, 951, 1483, 1636, 1757, 2154
RseI	CAYNNNNRTG	2 cut(s)	1747, 1878
SapI	GCTCTTC	2 cut(s)	105, 1404
SatI	GCNGC	7 cut(s)	140, 1039, 1163, 1298, 1301, 1554, 1732
Sau3AI	GATC	9 cut(s)	19, 37, 217, 255, 1364, 1710, 1936, 2047, 2068
Sau96I	GGNCC	4 cut(s)	90, 1190, 1264, 1424
ScrFI	CCNGG	2 cut(s)	656, 835
SfaNI	GCATC	8 cut(s)	383, 433, 583, 814, 1384, 1878, 2116, 2128
SfcI	CTRYAG	3 cut(s)	64, 1465, 2133
SinI	GGWCC	2 cut(s)	90, 1190
SmiMI	CAYNNNNRTG	2 cut(s)	1747, 1878
SmlI	CTYRAG	2 cut(s)	1348, 1654
SmoI	CTYRAG	2 cut(s)	1348, 1654
SphI	GCATGC	1 cut(s)	1024
Sse9I	AATT	5 cut(s)	861, 1011, 1026, 1548, 1761
SsiI	CCGC	7 cut(s)	503, 1002, 1111, 1422, 1553, 1624, 1782
SspMI	CTAG	2 cut(s)	1419, 1514
StyD4I	CCNGG	2 cut(s)	654, 833
StyI	CCWWGG	2 cut(s)	946, 1873
TaaI	ACNGT	6 cut(s)	352, 410, 708, 1531, 1917, 2030
TaiI	ACGT	3 cut(s)	960, 1135, 1758
TaqI	TCGA	4 cut(s)	1122, 1259, 1508, 1590
TaqII	GACCGA	1 cut(s)	1423
TasI	AATT	5 cut(s)	861, 1011, 1026, 1548, 1761
TatI	WGTACW	1 cut(s)	1635
TauI	GCSGC	1 cut(s)	1556
TfiI	GAWTC	4 cut(s)	1106, 1461, 1490, 2113
TscAI	CASTG	3 cut(s)	357, 1534, 1920
TseFI	GTSAC	2 cut(s)	1282, 1676
TseI	GCWGC	6 cut(s)	139, 1038, 1162, 1297, 1300, 1731
Tsp45I	GTSAC	2 cut(s)	1282, 1676
TspDTI	ATGAA	9 cut(s)	1004, 1344, 1403, 1503, 1593, 1691, 1817, 1939, 2033
TspGWI	ACGGA	2 cut(s)	599, 742
TspRI	CASTG	3 cut(s)	357, 1534, 1920
Tth111I	GACNNNGTC	1 cut(s)	1343
Van91I	CCANNNNNTGG	1 cut(s)	929
Vha464I	CTTAAG	2 cut(s)	1348, 1654
VpaK11BI	GGWCC	2 cut(s)	90, 1190
XagI	CCTNNNNNAGG	1 cut(s)	85
XapI	RAATTY	1 cut(s)	1011
XceI	RCATGY	4 cut(s)	601, 1024, 1609, 1771
XspI	CTAG	2 cut(s)	1419, 1514
Zsp2I	ATGCAT	2 cut(s)	448, 599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.