Ankyrin repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58760 AT3G58760 AT3G58760 AT3G58760 AT3G58760 AT3G58760 |
| fragaria_vesca | FvH4_6g37800 FvH4_6g37800 FvH4_6g37800 FvH4_6g37800 FvH4_6g37800 FvH4_6g37800 |
| malus_domestica | MD09G1155800.v1.1 MD17G1141800.v1.1 |
| prunus_persica | Prupe.3G170100_v2.0.a1 Prupe.3G170100_v2.0.a1 Prupe.3G170100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0150911 |
| rosa_laevigata | RLG00000020515 |
| rosa_multiflora | Rmu_sc0000185.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00096860 |
| rosa_rugosa | Rorug02G0423100 |
| rosa_samantha | Rh2AG483400 Rh2BG495800 Rh2CG469700 Rh2DG506800 |
| rosa_wichuraiana | Rw2G039620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 920 |
| Acc65I | GGTACC | 1 cut(s) | 524 |
| AccB1I | GGYRCC | 1 cut(s) | 524 |
| AccBSI | CCGCTC | 1 cut(s) | 1392 |
| AccII | CGCG | 1 cut(s) | 1122 |
| AciI | CCGC | 6 cut(s) | 119, 122, 267, 883, 1120, 1390 |
| AclWI | GGATC | 3 cut(s) | 137, 143, 150 |
| AcsI | RAATTY | 1 cut(s) | 513 |
| AcuI | CTGAAG | 1 cut(s) | 861 |
| AdeI | CACNNNGTG | 1 cut(s) | 784 |
| AfaI | GTAC | 6 cut(s) | 217, 250, 349, 470, 526, 694 |
| AgsI | TTSAA | 7 cut(s) | 34, 519, 641, 800, 1145, 1165, 1408 |
| AjiI | CACGTC | 2 cut(s) | 262, 559 |
| AjnI | CCWGG | 1 cut(s) | 1209 |
| AluBI | AGCT | 7 cut(s) | 37, 131, 298, 490, 931, 1204, 1308 |
| AluI | AGCT | 7 cut(s) | 37, 131, 298, 490, 931, 1204, 1308 |
| AlwI | GGATC | 3 cut(s) | 137, 143, 150 |
| ApeKI | GCWGC | 4 cut(s) | 116, 298, 301, 931 |
| ApoI | RAATTY | 1 cut(s) | 513 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1101 |
| Asp718I | GGTACC | 1 cut(s) | 524 |
| AspLEI | GCGC | 1 cut(s) | 61 |
| AspS9I | GGNCC | 2 cut(s) | 334, 761 |
| AsuC2I | CCSGG | 1 cut(s) | 1377 |
| AsuHPI | GGTGA | 3 cut(s) | 191, 703, 1327 |
| AvaII | GGWCC | 2 cut(s) | 334, 761 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 207, 240, 1029, 1062 |
| BamHI | GGATCC | 1 cut(s) | 142 |
| BanI | GGYRCC | 1 cut(s) | 524 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 34, 66 |
| BbsI | GAAGAC | 4 cut(s) | 42, 606, 953, 1122 |
| BbvI | GCAGC | 4 cut(s) | 103, 285, 288, 918 |
| BccI | CCATC | 3 cut(s) | 182, 333, 660 |
| BceAI | ACGGC | 1 cut(s) | 294 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 98, 132 |
| BciT130I | CCWGG | 1 cut(s) | 1211 |
| BcnI | CCSGG | 1 cut(s) | 1377 |
| BfaI | CTAG | 6 cut(s) | 38, 674, 749, 807, 863, 1322 |
| BfmI | CTRYAG | 2 cut(s) | 126, 483 |
| BglII | AGATCT | 1 cut(s) | 733 |
| BisI | GCNGC | 7 cut(s) | 117, 120, 123, 267, 299, 302, 932 |
| BlpI | GCTNAGC | 2 cut(s) | 305, 417 |
| BlsI | GCNGC | 7 cut(s) | 118, 121, 124, 268, 300, 303, 933 |
| Bme1390I | CCNGG | 2 cut(s) | 1211, 1377 |
| Bme18I | GGWCC | 2 cut(s) | 334, 761 |
| BmgBI | CACGTC | 2 cut(s) | 262, 559 |
| BmgT120I | GGNCC | 2 cut(s) | 334, 761 |
| BmiI | GGNNCC | 3 cut(s) | 144, 526, 1008 |
| BmrFI | CCNGG | 2 cut(s) | 1211, 1377 |
| BmsI | GCATC | 7 cut(s) | 192, 201, 232, 352, 1241, 1308, 1319 |
| BpiI | GAAGAC | 4 cut(s) | 42, 606, 953, 1122 |
| BpmI | CTGGAG | 1 cut(s) | 993 |
| Bpu10I | CCTNAGC | 1 cut(s) | 318 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 305, 417 |
| BpuMI | CCSGG | 1 cut(s) | 1377 |
| Bsa29I | ATCGAT | 2 cut(s) | 186, 240 |
| BsaJI | CCNNGG | 1 cut(s) | 310 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 415, 445 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| Bse3DI | GCAATG | 1 cut(s) | 853 |
| BseBI | CCWGG | 1 cut(s) | 1211 |
| BseCI | ATCGAT | 2 cut(s) | 186, 240 |
| BseDI | CCNNGG | 1 cut(s) | 310 |
| BseGI | GGATG | 3 cut(s) | 478, 652, 892 |
| BseMI | GCAATG | 1 cut(s) | 853 |
| BseMII | CTCAG | 1 cut(s) | 701 |
| BseXI | GCAGC | 4 cut(s) | 103, 285, 288, 918 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| Bsh1236I | CGCG | 1 cut(s) | 1122 |
| BshNI | GGYRCC | 1 cut(s) | 524 |
| BshVI | ATCGAT | 2 cut(s) | 186, 240 |
| BsiSI | CCGG | 3 cut(s) | 23, 62, 1377 |
| BslFI | GGGAC | 3 cut(s) | 635, 909, 1235 |
| BsmFI | GGGAC | 3 cut(s) | 635, 909, 1235 |
| BsmI | GAATGC | 1 cut(s) | 616 |
| Bsp143I | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 305, 417 |
| BspACI | CCGC | 6 cut(s) | 119, 122, 267, 883, 1120, 1390 |
| BspCNI | CTCAG | 1 cut(s) | 700 |
| BspDI | ATCGAT | 2 cut(s) | 186, 240 |
| BspFNI | CGCG | 1 cut(s) | 1122 |
| BspHI | TCATGA | 2 cut(s) | 382, 1105 |
| BspLI | GGNNCC | 3 cut(s) | 144, 526, 1008 |
| BspPI | GGATC | 3 cut(s) | 137, 143, 150 |
| BspQI | GCTCTTC | 1 cut(s) | 261 |
| BspT107I | GGYRCC | 1 cut(s) | 524 |
| BsrBI | CCGCTC | 1 cut(s) | 1392 |
| BsrDI | GCAATG | 1 cut(s) | 853 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssECI | CCNNGG | 1 cut(s) | 310 |
| BssMI | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| Bst2UI | CCWGG | 1 cut(s) | 1211 |
| Bst4CI | ACNGT | 3 cut(s) | 233, 952, 989 |
| Bst6I | CTCTTC | 2 cut(s) | 261, 1023 |
| BstC8I | GCNNGC | 5 cut(s) | 24, 57, 774, 929, 1297 |
| BstDEI | CTNAG | 4 cut(s) | 305, 318, 417, 687 |
| BstDSI | CCRYGG | 1 cut(s) | 310 |
| BstF5I | GGATG | 3 cut(s) | 478, 652, 892 |
| BstFNI | CGCG | 1 cut(s) | 1122 |
| BstHHI | GCGC | 1 cut(s) | 61 |
| BstKTI | GATC | 4 cut(s) | 138, 145, 736, 1288 |
| BstMBI | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 19, 43, 52, 122, 128, 251, 1305, 1398 |
| BstNI | CCWGG | 1 cut(s) | 1211 |
| BstNSI | RCATGY | 2 cut(s) | 443, 981 |
| BstSCI | CCNGG | 2 cut(s) | 1209, 1375 |
| BstSFI | CTRYAG | 2 cut(s) | 126, 483 |
| BstUI | CGCG | 1 cut(s) | 1122 |
| BstV1I | GCAGC | 4 cut(s) | 103, 285, 288, 918 |
| BstV2I | GAAGAC | 4 cut(s) | 42, 606, 953, 1122 |
| BstX2I | RGATCY | 2 cut(s) | 142, 733 |
| BstYI | RGATCY | 2 cut(s) | 142, 733 |
| Bsu15I | ATCGAT | 2 cut(s) | 186, 240 |
| BsuTUI | ATCGAT | 2 cut(s) | 186, 240 |
| BtgI | CCRYGG | 1 cut(s) | 310 |
| BtrI | CACGTC | 2 cut(s) | 262, 559 |
| BtsCI | GGATG | 3 cut(s) | 478, 652, 892 |
| BtsI | GCAGTG | 3 cut(s) | 372, 632, 789 |
| BtsIMutI | CAGTG | 4 cut(s) | 372, 591, 632, 789 |
| Cac8I | GCNNGC | 5 cut(s) | 24, 57, 774, 929, 1297 |
| CciI | TCATGA | 2 cut(s) | 382, 1105 |
| CfoI | GCGC | 1 cut(s) | 61 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 2 cut(s) | 334, 761 |
| ClaI | ATCGAT | 2 cut(s) | 186, 240 |
| Csp6I | GTAC | 6 cut(s) | 216, 249, 348, 469, 525, 693 |
| CviAII | CATG | 8 cut(s) | 383, 410, 440, 543, 700, 978, 993, 1106 |
| CviQI | GTAC | 6 cut(s) | 216, 249, 348, 469, 525, 693 |
| DdeI | CTNAG | 4 cut(s) | 305, 318, 417, 687 |
| DpnI | GATC | 4 cut(s) | 137, 144, 735, 1287 |
| DpnII | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| DraIII | CACNNNGTG | 1 cut(s) | 784 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 920 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 920 |
| Eam1104I | CTCTTC | 2 cut(s) | 261, 1023 |
| EarI | CTCTTC | 2 cut(s) | 261, 1023 |
| Eco32I | GATATC | 1 cut(s) | 184 |
| Eco47I | GGWCC | 2 cut(s) | 334, 761 |
| Eco57I | CTGAAG | 1 cut(s) | 861 |
| EcoO109I | RGGNCCY | 1 cut(s) | 761 |
| EcoRII | CCWGG | 1 cut(s) | 1209 |
| EcoRV | GATATC | 1 cut(s) | 184 |
| EcoT22I | ATGCAT | 2 cut(s) | 441, 616 |
| FaeI | CATG | 8 cut(s) | 386, 413, 443, 546, 703, 981, 996, 1109 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 512, 544 |
| FaqI | GGGAC | 3 cut(s) | 635, 909, 1235 |
| FatI | CATG | 8 cut(s) | 382, 409, 439, 542, 699, 977, 992, 1105 |
| FauI | CCCGC | 1 cut(s) | 876 |
| Fnu4HI | GCNGC | 7 cut(s) | 117, 120, 123, 267, 299, 302, 932 |
| FokI | GGATG | 3 cut(s) | 465, 639, 899 |
| Fsp4HI | GCNGC | 7 cut(s) | 117, 120, 123, 267, 299, 302, 932 |
| FspBI | CTAG | 6 cut(s) | 38, 674, 749, 807, 863, 1322 |
| GlaI | GCGC | 1 cut(s) | 60 |
| GluI | GCNGC | 7 cut(s) | 117, 120, 123, 267, 299, 302, 932 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| GsuI | CTGGAG | 1 cut(s) | 993 |
| HapII | CCGG | 3 cut(s) | 23, 62, 1377 |
| HhaI | GCGC | 1 cut(s) | 61 |
| Hin1II | CATG | 8 cut(s) | 386, 413, 443, 546, 703, 981, 996, 1109 |
| Hin6I | GCGC | 1 cut(s) | 59 |
| HinP1I | GCGC | 1 cut(s) | 59 |
| HincII | GTYRAC | 1 cut(s) | 90 |
| HindII | GTYRAC | 1 cut(s) | 90 |
| HinfI | GANTC | 9 cut(s) | 30, 65, 151, 209, 475, 890, 921, 1341, 1372 |
| HpaI | GTTAAC | 1 cut(s) | 90 |
| HpaII | CCGG | 3 cut(s) | 23, 62, 1377 |
| HphI | GGTGA | 3 cut(s) | 191, 703, 1327 |
| Hpy166II | GTNNAC | 5 cut(s) | 90, 591, 1097, 1157, 1353 |
| Hpy188I | TCNGA | 5 cut(s) | 147, 657, 690, 903, 1346 |
| Hpy188III | TCNNGA | 7 cut(s) | 69, 383, 464, 749, 894, 1010, 1106 |
| Hpy8I | GTNNAC | 5 cut(s) | 90, 591, 1097, 1157, 1353 |
| Hpy99I | CGWCG | 3 cut(s) | 110, 151, 266 |
| HpyAV | CCTTC | 5 cut(s) | 170, 325, 1082, 1306, 1343 |
| HpyCH4III | ACNGT | 3 cut(s) | 233, 952, 989 |
| HpyCH4IV | ACGT | 4 cut(s) | 86, 261, 558, 1153 |
| HpyCH4V | TGCA | 8 cut(s) | 359, 365, 439, 614, 632, 826, 911, 1295 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 19, 43, 52, 122, 128, 251, 1305, 1398 |
| HpyF3I | CTNAG | 4 cut(s) | 305, 318, 417, 687 |
| HpySE526I | ACGT | 4 cut(s) | 86, 261, 558, 1153 |
| Hsp92II | CATG | 8 cut(s) | 386, 413, 443, 546, 703, 981, 996, 1109 |
| HspAI | GCGC | 1 cut(s) | 59 |
| KpnI | GGTACC | 1 cut(s) | 528 |
| KroI | GCCGGC | 1 cut(s) | 22 |
| KroNI | GCCGGC | 1 cut(s) | 24 |
| KspAI | GTTAAC | 1 cut(s) | 90 |
| Kzo9I | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| LguI | GCTCTTC | 1 cut(s) | 261 |
| LmnI | GCTCC | 4 cut(s) | 436, 1012, 1174, 1305 |
| Lsp1109I | GCAGC | 4 cut(s) | 103, 285, 288, 918 |
| LweI | GCATC | 7 cut(s) | 192, 201, 232, 352, 1241, 1308, 1319 |
| MaeI | CTAG | 6 cut(s) | 38, 674, 749, 807, 863, 1322 |
| MaeII | ACGT | 4 cut(s) | 86, 261, 558, 1153 |
| MaeIII | GTNAC | 6 cut(s) | 233, 682, 709, 973, 1194, 1385 |
| MalI | GATC | 4 cut(s) | 137, 144, 735, 1287 |
| MbiI | CCGCTC | 1 cut(s) | 1392 |
| MboI | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| MflI | RGATCY | 2 cut(s) | 142, 733 |
| MluCI | AATT | 5 cut(s) | 513, 552, 801, 817, 1290 |
| MlyI | GAGTC | 1 cut(s) | 930 |
| MmeI | TCCRAC | 3 cut(s) | 170, 525, 1196 |
| MnlI | CCTC | 6 cut(s) | 94, 363, 574, 774, 879, 1006 |
| Mph1103I | ATGCAT | 2 cut(s) | 441, 616 |
| MreI | CGCCGGCG | 1 cut(s) | 22 |
| MroNI | GCCGGC | 1 cut(s) | 22 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1101 |
| MseI | TTAA | 9 cut(s) | 9, 89, 158, 393, 531, 567, 942, 954, 1067 |
| MslI | CAYNNNNRTG | 1 cut(s) | 657 |
| MspA1I | CMGCKG | 1 cut(s) | 131 |
| MspI | CCGG | 3 cut(s) | 23, 62, 1377 |
| MspR9I | CCNGG | 2 cut(s) | 1211, 1377 |
| Mva1269I | GAATGC | 1 cut(s) | 616 |
| MvaI | CCWGG | 1 cut(s) | 1211 |
| MvnI | CGCG | 1 cut(s) | 1122 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 19, 43, 52, 122, 128, 251, 1305, 1398 |
| NaeI | GCCGGC | 1 cut(s) | 24 |
| NciI | CCSGG | 1 cut(s) | 1377 |
| NdeII | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| NgoMIV | GCCGGC | 1 cut(s) | 22 |
| NlaIII | CATG | 8 cut(s) | 386, 413, 443, 546, 703, 981, 996, 1109 |
| NlaIV | GGNNCC | 3 cut(s) | 144, 526, 1008 |
| NmuCI | GTSAC | 2 cut(s) | 233, 709 |
| NsiI | ATGCAT | 2 cut(s) | 441, 616 |
| NspI | RCATGY | 2 cut(s) | 443, 981 |
| PagI | TCATGA | 2 cut(s) | 382, 1105 |
| PciSI | GCTCTTC | 1 cut(s) | 261 |
| PctI | GAATGC | 1 cut(s) | 616 |
| PdiI | GCCGGC | 1 cut(s) | 24 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1101 |
| PfeI | GAWTC | 8 cut(s) | 30, 65, 151, 209, 475, 890, 1341, 1372 |
| PfoI | TCCNGGA | 1 cut(s) | 1209 |
| PkrI | GCNGC | 7 cut(s) | 118, 121, 124, 268, 300, 303, 933 |
| PleI | GAGTC | 1 cut(s) | 929 |
| PpsI | GAGTC | 1 cut(s) | 929 |
| PpuMI | RGGWCCY | 1 cut(s) | 761 |
| Psp5II | RGGWCCY | 1 cut(s) | 761 |
| Psp6I | CCWGG | 1 cut(s) | 1209 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PspGI | CCWGG | 1 cut(s) | 1209 |
| PspN4I | GGNNCC | 3 cut(s) | 144, 526, 1008 |
| PspPI | GGNCC | 2 cut(s) | 334, 761 |
| PspPPI | RGGWCCY | 1 cut(s) | 761 |
| PsuI | RGATCY | 2 cut(s) | 142, 733 |
| PvuII | CAGCTG | 1 cut(s) | 131 |
| RsaI | GTAC | 6 cut(s) | 217, 250, 349, 470, 526, 694 |
| RsaNI | GTAC | 6 cut(s) | 216, 249, 348, 469, 525, 693 |
| RseI | CAYNNNNRTG | 1 cut(s) | 657 |
| SapI | GCTCTTC | 1 cut(s) | 261 |
| SaqAI | TTAA | 9 cut(s) | 9, 89, 158, 393, 531, 567, 942, 954, 1067 |
| SatI | GCNGC | 7 cut(s) | 117, 120, 123, 267, 299, 302, 932 |
| Sau3AI | GATC | 4 cut(s) | 135, 142, 733, 1285 |
| Sau96I | GGNCC | 2 cut(s) | 334, 761 |
| SchI | GAGTC | 1 cut(s) | 930 |
| ScrFI | CCNGG | 2 cut(s) | 1211, 1377 |
| SfaNI | GCATC | 7 cut(s) | 192, 201, 232, 352, 1241, 1308, 1319 |
| SfcI | CTRYAG | 2 cut(s) | 126, 483 |
| SgrAI | CRCCGGYG | 1 cut(s) | 22 |
| SinI | GGWCC | 2 cut(s) | 334, 761 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 657 |
| Sse9I | AATT | 5 cut(s) | 513, 552, 801, 817, 1290 |
| SsiI | CCGC | 6 cut(s) | 119, 122, 267, 883, 1120, 1390 |
| SspMI | CTAG | 6 cut(s) | 38, 674, 749, 807, 863, 1322 |
| StyD4I | CCNGG | 2 cut(s) | 1209, 1375 |
| TaaI | ACNGT | 3 cut(s) | 233, 952, 989 |
| TaiI | ACGT | 4 cut(s) | 89, 264, 561, 1156 |
| TaqI | TCGA | 4 cut(s) | 186, 240, 739, 1288 |
| TaqII | GACCGA | 1 cut(s) | 351 |
| TasI | AATT | 5 cut(s) | 513, 552, 801, 817, 1290 |
| TauI | GCSGC | 3 cut(s) | 122, 125, 269 |
| TfiI | GAWTC | 8 cut(s) | 30, 65, 151, 209, 475, 890, 1341, 1372 |
| Tru1I | TTAA | 9 cut(s) | 9, 89, 158, 393, 531, 567, 942, 954, 1067 |
| Tru9I | TTAA | 9 cut(s) | 9, 89, 158, 393, 531, 567, 942, 954, 1067 |
| TscAI | CASTG | 4 cut(s) | 372, 598, 639, 789 |
| TseFI | GTSAC | 2 cut(s) | 233, 709 |
| TseI | GCWGC | 4 cut(s) | 116, 298, 301, 931 |
| Tsp45I | GTSAC | 2 cut(s) | 233, 709 |
| TspDTI | ATGAA | 8 cut(s) | 467, 531, 612, 830, 981, 1041, 1094, 1164 |
| TspGWI | ACGGA | 1 cut(s) | 107 |
| TspRI | CASTG | 4 cut(s) | 372, 598, 639, 789 |
| VpaK11BI | GGWCC | 2 cut(s) | 334, 761 |
| XapI | RAATTY | 1 cut(s) | 513 |
| XbaI | TCTAGA | 1 cut(s) | 748 |
| XceI | RCATGY | 2 cut(s) | 443, 981 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1101 |
| XspI | CTAG | 6 cut(s) | 38, 674, 749, 807, 863, 1322 |
| Zsp2I | ATGCAT | 2 cut(s) | 441, 616 |