AT4G01330
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
550175 .. 553097
2923 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01330.3

Sequence Viewer

Length: 1440 bp
ATGACGATGTCTATATTCAATCCTGATTCAATCAACAACGAGCTATCGAAACCAACATCGATCTTTGGTCTAAAGCTTTGGGTCGTCATCGGAATTTTACTAGGATCTCTTATAGTCATCGCTCTCTTCTTTCTCTCCCTCTGTTTAACCTCTCGCCGGAGAAACCGTAAGCCACGTCACGCCGATTTCGCATCCGCAGCCGTAGCAACGCCGCCGATTTCAAAGGAGATTCAGGAGATCGTTAGACCTCCTGCGCAAGACCATTGCCATCCGACGCAGCCCGTTGCGGCGGAGATTCAAGTGGATATAGGGAAGACCGAGCACCGTGTTGTGTTCTCGGATCGAGTCTCGAGTGGTGAAAGCAGAGGAACGGTTAGTGAAACGGCGTCGTATTCAGGGAGTGGTTGTGTTGGACCTGAGGTTTCGCATCTTGGTTGGGGAAGATGGTATACTCTTAGAGAGCTTGAAGCAGCTACTAATGGATTGTGTGAAGAGAATGTGATCGGAGAAGGAGGTTATGGGATTGTTTATAGTGGGATTTTAACTGATGGAACTAAAGTCGCTGTCAAGAATCTGCTTAACAACAGGGGTCAAGCTGAGAAGGAGTTTAGAGTGGAAGTGGAAGCTATCGGGCGTGTAAGGCATAAGAATCTCGTTAGGCTATTAGGATACTGCGTCGAAGGAGCATACAGGATGCTCGTGTATGACTACGTCGATAATGGCAACTTGGAGCAATGGATTCATGGGGATGTTGGTGATAAAAGTCCGTTGACTTGGGATATTCGTATGAACATAATACTTTGCATGGCGAAAGGATTGGCCTATCTGCATGAGGGTCTTGAACCGAAAGTCGTTCATCGGGACATAAAATCTAGTAATATTTTGCTTGATCGTCAATGGAATGCTAAGGTATCAGATTTTGGACTTGCTAAGCTCTTGTTCTCCGAGAGCAGCTACGTGACAACCCGAGTAATGGGAACTTTTGGATATGTTGCGCCTGAGTATGCTTGCACCGGAATGTTGACAGAAAAGAGTGATATCTATAGTTTTGGGATATTAATCATGGAGATAATCACCGGAAGAAATCCTGTCGATTATAGTCGACCTCAAGGAGAGGTGAATTTGGTTGAGTGGCTGAAAACAATGGTTGGAAACCGAAGGTCTGAGGAAGTAGTCGATCCAAAAATACCCGAACCGCCCACTTCAAAAGCTCTTAAACGCGTGTTGCTCGTCGCGCTGCGTTGTGTGGATCCGGACGCGAATAAGAGACCTAAAATGGGTCATATTATACACATGCTTGAAGCTGAAGACTTGTTCTATCGTGACGAACGACGAGCCACGAGGGAGCATGCAAGCCGCGATTTTAACCAGCCACGGACTGAAATTTCACCGGCTGTGGCTGAGACGAGCGAAAGTGACAGTTCAAAAGACCGAAGATAA

Protein Analysis

479

Amino Acids

53.53

Weight (kDa)

6.66

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 165 - 433 6e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 165 - 431 6.2e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01540 AT1G01540 AT4G01330 AT4G01330 AT4G01330
fragaria_vesca FvH4_7g15080
malus_domestica MD00G1111700.v1.1 MD01G1069300.v1.1
prunus_persica Prupe.2G175400_v2.0.a1
pyrus_communis pycom01g09870
rosa_chinensis RchiOBHm_Chr1g0357191
rosa_laevigata RLG00000028045
rosa_multiflora Rmu_sc0005967.1_g000006
rosa_rugosa Rorug01G0254800
rosa_samantha Rh1BG236900
rosa_wichuraiana Rw1G023740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 255
AccI GTMKAC 2 cut(s) 449, 1102
AccII CGCG 4 cut(s) 1221, 1235, 1259, 1359
AccIII TCCGGA 1 cut(s) 1252
AciI CCGC 6 cut(s) 195, 212, 287, 290, 1196, 1357
AclWI GGATC 5 cut(s) 112, 348, 1172, 1244, 1257
AcsI RAATTY 3 cut(s) 93, 1120, 1383
AcuI CTGAAG 1 cut(s) 1326
AcyI GRCGYC 1 cut(s) 386
AfiI CCNNNNNNNGG 3 cut(s) 156, 973, 1277
AflIII ACRYGT 1 cut(s) 1219
AgsI TTSAA 9 cut(s) 19, 30, 222, 299, 467, 842, 1206, 1301, 1425
AjiI CACGTC 1 cut(s) 176
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 3 cut(s) 352, 1261, 1397
AlwI GGATC 5 cut(s) 112, 348, 1172, 1244, 1257
Ama87I CYCGRG 2 cut(s) 349, 966
Aor13HI TCCGGA 1 cut(s) 1252
AoxI GGCC 1 cut(s) 819
ApeKI GCWGC 5 cut(s) 197, 277, 470, 951, 1237
ApoI RAATTY 3 cut(s) 93, 1120, 1383
AseI ATTAAT 1 cut(s) 1058
AspLEI GCGC 3 cut(s) 256, 997, 1237
AspS9I GGNCC 1 cut(s) 413
AsuHPI GGTGA 5 cut(s) 368, 767, 1066, 1129, 1380
AvaI CYCGRG 2 cut(s) 349, 966
AvaII GGWCC 1 cut(s) 413
AxyI CCTNAGG 1 cut(s) 417
BamHI GGATCC 1 cut(s) 1249
BarI GAAGNNNNNNTAC 2 cut(s) 433, 465
BauI CACGAG 2 cut(s) 698, 1339
BbsI GAAGAC 2 cut(s) 320, 1314
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 5 cut(s) 209, 289, 482, 963, 1224
BccI CCATC 3 cut(s) 276, 438, 542
BceAI ACGGC 2 cut(s) 185, 399
BciVI GTATCC 1 cut(s) 662
BcoDI GTCTC 3 cut(s) 352, 1261, 1397
BfaI CTAG 2 cut(s) 101, 873
BfmI CTRYAG 1 cut(s) 1042
BfuI GTATCC 1 cut(s) 662
BisI GCNGC 8 cut(s) 198, 212, 278, 288, 471, 952, 1238, 1357
BlpI GCTNAGC 1 cut(s) 930
BlsI GCNGC 8 cut(s) 199, 213, 279, 289, 472, 953, 1239, 1358
Bme18I GGWCC 1 cut(s) 413
BmeT110I CYCGRG 2 cut(s) 349, 966
BmgBI CACGTC 1 cut(s) 176
BmgT120I GGNCC 1 cut(s) 413
BmiI GGNNCC 1 cut(s) 1251
BmsI GCATC 3 cut(s) 200, 436, 684
BpiI GAAGAC 2 cut(s) 320, 1314
Bpu10I CCTNAGC 1 cut(s) 906
Bpu1102I GCTNAGC 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 1092
Bsa29I ATCGAT 1 cut(s) 59
BsaAI YACGTR 1 cut(s) 958
BsaBI GATNNNNATC 1 cut(s) 1058
BsaHI GRCGYC 1 cut(s) 386
BsaI GGTCTC 1 cut(s) 1261
BsaJI CCNNGG 1 cut(s) 1373
BsaWI WCCGGW 3 cut(s) 1013, 1076, 1252
BsaXI ACNNNNNCTCC 4 cut(s) 151, 181, 391, 421
Bsc4I CCNNNNNNNGG 3 cut(s) 156, 973, 1277
Bse118I RCCGGY 1 cut(s) 1390
Bse21I CCTNAGG 1 cut(s) 417
Bse3DI GCAATG 2 cut(s) 262, 740
Bse8I GATNNNNATC 1 cut(s) 1058
BseAI TCCGGA 1 cut(s) 1252
BseCI ATCGAT 1 cut(s) 59
BseDI CCNNGG 1 cut(s) 1373
BseGI GGATG 4 cut(s) 191, 268, 699, 754
BseJI GATNNNNATC 1 cut(s) 1058
BseLI CCNNNNNNNGG 3 cut(s) 156, 973, 1277
BseMI GCAATG 2 cut(s) 262, 740
BseMII CTCAG 5 cut(s) 408, 588, 990, 1155, 1392
BseXI GCAGC 5 cut(s) 209, 289, 482, 963, 1224
Bsh1236I CGCG 4 cut(s) 1221, 1235, 1259, 1359
BshFI GGCC 1 cut(s) 821
BshVI ATCGAT 1 cut(s) 59
BsiHKAI GWGCWC 1 cut(s) 324
BsiHKCI CYCGRG 2 cut(s) 349, 966
BsiSI CCGG 5 cut(s) 157, 1014, 1077, 1253, 1391
BslFI GGGAC 1 cut(s) 875
BslI CCNNNNNNNGG 3 cut(s) 156, 973, 1277
BsmAI GTCTC 3 cut(s) 352, 1261, 1397
BsmBI CGTCTC 1 cut(s) 1397
BsmFI GGGAC 1 cut(s) 875
BsmI GAATGC 1 cut(s) 907
BsnI GGCC 1 cut(s) 821
Bso31I GGTCTC 1 cut(s) 1261
BsoBI CYCGRG 2 cut(s) 349, 966
Bsp1286I GDGCHC 1 cut(s) 324
Bsp13I TCCGGA 1 cut(s) 1252
Bsp143I GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
Bsp1720I GCTNAGC 1 cut(s) 930
BspACI CCGC 6 cut(s) 195, 212, 287, 290, 1196, 1357
BspANI GGCC 1 cut(s) 821
BspCNI CTCAG 5 cut(s) 409, 589, 991, 1156, 1393
BspDI ATCGAT 1 cut(s) 59
BspEI TCCGGA 1 cut(s) 1252
BspFNI CGCG 4 cut(s) 1221, 1235, 1259, 1359
BspLI GGNNCC 1 cut(s) 1251
BspPI GGATC 5 cut(s) 112, 348, 1172, 1244, 1257
BspTNI GGTCTC 1 cut(s) 1261
BsrDI GCAATG 2 cut(s) 262, 740
BsrFI RCCGGY 1 cut(s) 1390
BssAI RCCGGY 1 cut(s) 1390
BssECI CCNNGG 1 cut(s) 1373
BssMI GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
BssNAI GTATAC 1 cut(s) 450
BssNI GRCGYC 1 cut(s) 386
BssSI CACGAG 2 cut(s) 698, 1339
Bst1107I GTATAC 1 cut(s) 450
Bst2BI CACGAG 2 cut(s) 698, 1339
Bst4CI ACNGT 4 cut(s) 167, 326, 373, 1421
Bst6I CTCTTC 2 cut(s) 131, 486
BstACI GRCGYC 1 cut(s) 386
BstBAI YACGTR 1 cut(s) 958
BstC8I GCNNGC 3 cut(s) 1009, 1350, 1354
BstDEI CTNAG 8 cut(s) 417, 455, 597, 906, 930, 999, 1164, 1401
BstDSI CCRYGG 1 cut(s) 1373
BstF5I GGATG 4 cut(s) 191, 268, 699, 754
BstFNI CGCG 4 cut(s) 1221, 1235, 1259, 1359
BstHHI GCGC 3 cut(s) 256, 997, 1237
BstKTI GATC 8 cut(s) 63, 107, 240, 343, 504, 892, 1180, 1252
BstMAI GTCTC 3 cut(s) 352, 1261, 1397
BstMBI GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
BstMWI GCNNNNNNNGC 5 cut(s) 188, 197, 203, 640, 1234
BstNSI RCATGY 2 cut(s) 1297, 1352
BstSFI CTRYAG 1 cut(s) 1042
BstUI CGCG 4 cut(s) 1221, 1235, 1259, 1359
BstV1I GCAGC 5 cut(s) 209, 289, 482, 963, 1224
BstV2I GAAGAC 2 cut(s) 320, 1314
BstX2I RGATCY 2 cut(s) 104, 1249
BstYI RGATCY 2 cut(s) 104, 1249
BstZ17I GTATAC 1 cut(s) 450
Bsu15I ATCGAT 1 cut(s) 59
Bsu36I CCTNAGG 1 cut(s) 417
BsuI GTATCC 1 cut(s) 662
BsuRI GGCC 1 cut(s) 821
BsuTUI ATCGAT 1 cut(s) 59
BtgI CCRYGG 1 cut(s) 1373
BtgZI GCGATG 1 cut(s) 103
BtrI CACGTC 1 cut(s) 176
BtsCI GGATG 4 cut(s) 191, 268, 699, 754
Cac8I GCNNGC 3 cut(s) 1009, 1350, 1354
CfoI GCGC 3 cut(s) 256, 997, 1237
Cfr10I RCCGGY 1 cut(s) 1390
Cfr13I GGNCC 1 cut(s) 413
ClaI ATCGAT 1 cut(s) 59
CseI GACGC 4 cut(s) 283, 375, 664, 1265
CviAII CATG 6 cut(s) 743, 805, 830, 1063, 1294, 1349
DdeI CTNAG 8 cut(s) 417, 455, 597, 906, 930, 999, 1164, 1401
DpnI GATC 8 cut(s) 62, 106, 239, 342, 503, 891, 1179, 1251
DpnII GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
Eam1104I CTCTTC 2 cut(s) 131, 486
EarI CTCTTC 2 cut(s) 131, 486
EciI GGCGGA 1 cut(s) 305
Eco31I GGTCTC 1 cut(s) 1261
Eco32I GATATC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 413
Eco57I CTGAAG 1 cut(s) 1326
Eco81I CCTNAGG 1 cut(s) 417
Eco88I CYCGRG 2 cut(s) 349, 966
EcoRV GATATC 1 cut(s) 1039
Esp3I CGTCTC 1 cut(s) 1397
FaeI CATG 6 cut(s) 746, 808, 833, 1066, 1297, 1352
FaqI GGGAC 1 cut(s) 875
FatI CATG 6 cut(s) 742, 804, 829, 1062, 1293, 1348
FblI GTMKAC 2 cut(s) 449, 1102
Fnu4HI GCNGC 8 cut(s) 198, 212, 278, 288, 471, 952, 1238, 1357
FokI GGATG 4 cut(s) 178, 255, 706, 761
Fsp4HI GCNGC 8 cut(s) 198, 212, 278, 288, 471, 952, 1238, 1357
FspBI CTAG 2 cut(s) 101, 873
FspI TGCGCA 1 cut(s) 255
GlaI GCGC 3 cut(s) 255, 996, 1236
GluI GCNGC 8 cut(s) 198, 212, 278, 288, 471, 952, 1238, 1357
HaeIII GGCC 1 cut(s) 821
HapII CCGG 5 cut(s) 157, 1014, 1077, 1253, 1391
HgaI GACGC 4 cut(s) 283, 375, 664, 1265
HhaI GCGC 3 cut(s) 256, 997, 1237
Hin1I GRCGYC 1 cut(s) 386
Hin1II CATG 6 cut(s) 746, 808, 833, 1066, 1297, 1352
Hin6I GCGC 3 cut(s) 254, 995, 1235
HinP1I GCGC 3 cut(s) 254, 995, 1235
HincII GTYRAC 3 cut(s) 771, 1023, 1103
HindII GTYRAC 3 cut(s) 771, 1023, 1103
HindIII AAGCTT 1 cut(s) 74
HinfI GANTC 7 cut(s) 26, 229, 295, 345, 571, 649, 739
HpaII CCGG 5 cut(s) 157, 1014, 1077, 1253, 1391
HphI GGTGA 5 cut(s) 368, 767, 1066, 1129, 1380
Hpy166II GTNNAC 4 cut(s) 450, 771, 1023, 1103
Hpy188I TCNGA 7 cut(s) 92, 273, 340, 506, 916, 946, 1165
Hpy188III TCNNGA 8 cut(s) 23, 233, 349, 568, 839, 860, 1253, 1322
Hpy8I GTNNAC 4 cut(s) 450, 771, 1023, 1103
Hpy99I CGWCG 6 cut(s) 277, 391, 680, 716, 1235, 1335
HpyAV CCTTC 4 cut(s) 503, 595, 674, 1152
HpyCH4III ACNGT 4 cut(s) 167, 326, 373, 1421
HpyCH4IV ACGT 3 cut(s) 175, 711, 957
HpyCH4V TGCA 4 cut(s) 804, 829, 1011, 1352
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 197, 203, 640, 1234
HpyF3I CTNAG 8 cut(s) 417, 455, 597, 906, 930, 999, 1164, 1401
HpySE526I ACGT 3 cut(s) 175, 711, 957
Hsp92I GRCGYC 1 cut(s) 386
Hsp92II CATG 6 cut(s) 746, 808, 833, 1066, 1297, 1352
HspAI GCGC 3 cut(s) 254, 995, 1235
Kpn2I TCCGGA 1 cut(s) 1252
Kzo9I GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
LmnI GCTCC 3 cut(s) 683, 730, 1345
Lsp1109I GCAGC 5 cut(s) 209, 289, 482, 963, 1224
LweI GCATC 3 cut(s) 200, 436, 684
MaeI CTAG 2 cut(s) 101, 873
MaeII ACGT 3 cut(s) 175, 711, 957
MaeIII GTNAC 4 cut(s) 176, 958, 1322, 1415
MalI GATC 8 cut(s) 62, 106, 239, 342, 503, 891, 1179, 1251
MboI GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
MboII GAAGA 6 cut(s) 118, 325, 453, 503, 1092, 1319
MflI RGATCY 2 cut(s) 104, 1249
MhlI GDGCHC 1 cut(s) 324
MluCI AATT 3 cut(s) 93, 1120, 1383
MluI ACGCGT 1 cut(s) 1219
MlyI GAGTC 1 cut(s) 354
MmeI TCCRAC 3 cut(s) 296, 391, 1129
MroI TCCGGA 1 cut(s) 1252
MseI TTAA 6 cut(s) 146, 542, 579, 1058, 1215, 1365
MslI CAYNNNNRTG 2 cut(s) 747, 1016
MspI CCGG 5 cut(s) 157, 1014, 1077, 1253, 1391
Mva1269I GAATGC 1 cut(s) 907
MvnI CGCG 4 cut(s) 1221, 1235, 1259, 1359
MwoI GCNNNNNNNGC 5 cut(s) 188, 197, 203, 640, 1234
NdeII GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
NlaIII CATG 6 cut(s) 746, 808, 833, 1066, 1297, 1352
NlaIV GGNNCC 1 cut(s) 1251
NmuCI GTSAC 4 cut(s) 176, 958, 1322, 1415
NsbI TGCGCA 1 cut(s) 255
NspI RCATGY 2 cut(s) 1297, 1352
PaeI GCATGC 1 cut(s) 1352
PaeR7I CTCGAG 1 cut(s) 349
PcsI WCGNNNNNNNCGW 1 cut(s) 1327
PctI GAATGC 1 cut(s) 907
PfeI GAWTC 6 cut(s) 26, 229, 295, 571, 649, 739
PflFI GACNNNGTC 2 cut(s) 7, 710
PkrI GCNGC 8 cut(s) 199, 213, 279, 289, 472, 953, 1239, 1358
PleI GAGTC 1 cut(s) 353
PpsI GAGTC 1 cut(s) 353
Ppu21I YACGTR 1 cut(s) 958
PshBI ATTAAT 1 cut(s) 1058
PspN4I GGNNCC 1 cut(s) 1251
PspPI GGNCC 1 cut(s) 413
PsuI RGATCY 2 cut(s) 104, 1249
PsyI GACNNNGTC 2 cut(s) 7, 710
RseI CAYNNNNRTG 2 cut(s) 747, 1016
SalI GTCGAC 1 cut(s) 1101
SaqAI TTAA 6 cut(s) 146, 542, 579, 1058, 1215, 1365
SatI GCNGC 8 cut(s) 198, 212, 278, 288, 471, 952, 1238, 1357
Sau3AI GATC 8 cut(s) 60, 104, 237, 340, 501, 889, 1177, 1249
Sau96I GGNCC 1 cut(s) 413
SchI GAGTC 1 cut(s) 354
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 3 cut(s) 200, 436, 684
SfcI CTRYAG 1 cut(s) 1042
Sfr274I CTCGAG 1 cut(s) 349
SinI GGWCC 1 cut(s) 413
SlaI CTCGAG 1 cut(s) 349
SmiMI CAYNNNNRTG 2 cut(s) 747, 1016
SmlI CTYRAG 2 cut(s) 349, 1107
SmoI CTYRAG 2 cut(s) 349, 1107
SphI GCATGC 1 cut(s) 1352
Sse9I AATT 3 cut(s) 93, 1120, 1383
SsiI CCGC 6 cut(s) 195, 212, 287, 290, 1196, 1357
SspI AATATT 1 cut(s) 880
SspMI CTAG 2 cut(s) 101, 873
TaaI ACNGT 4 cut(s) 167, 326, 373, 1421
TaiI ACGT 3 cut(s) 178, 714, 960
TaqI TCGA 9 cut(s) 47, 59, 343, 350, 678, 714, 1092, 1102, 1176
TaqII GACCGA 1 cut(s) 332
TasI AATT 3 cut(s) 93, 1120, 1383
TauI GCSGC 3 cut(s) 214, 290, 1359
TfiI GAWTC 6 cut(s) 26, 229, 295, 571, 649, 739
Tru1I TTAA 6 cut(s) 146, 542, 579, 1058, 1215, 1365
Tru9I TTAA 6 cut(s) 146, 542, 579, 1058, 1215, 1365
TseFI GTSAC 4 cut(s) 176, 958, 1322, 1415
TseI GCWGC 5 cut(s) 197, 277, 470, 951, 1237
Tsp45I GTSAC 4 cut(s) 176, 958, 1322, 1415
TspDTI ATGAA 3 cut(s) 731, 803, 845
TspGWI ACGGA 2 cut(s) 756, 1390
Tth111I GACNNNGTC 2 cut(s) 7, 710
VpaK11BI GGWCC 1 cut(s) 413
VspI ATTAAT 1 cut(s) 1058
XapI RAATTY 3 cut(s) 93, 1120, 1383
XceI RCATGY 2 cut(s) 1297, 1352
XhoI CTCGAG 1 cut(s) 349
XmiI GTMKAC 2 cut(s) 449, 1102
XspI CTAG 2 cut(s) 101, 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.