Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009911

Physical Location & Seq

Genomic Coordinates Reverse (-)

8413263 .. 8415650

Gene Structure 2388 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCTTCCATGTCCACCGTCTTCCCCAAACCAACCTCTTTCATCTCTCAACCTCTAACAAAATCTCACAAATCCGATTCCGTAACCACATCCATTTCATTCCCTTCGAATTCGAAAACTCGTAGCTTAAGAACCATCTCTGTACGAGCTGGCTTAATCGAGCCAGATGGTGGGAAACTTGTGGATCTTGTTGTACCGGAACCGAGACGGCGAGAGAAGAAACACGAAGCGGCGGATTTGCCGAGAGTGAGATTGACGGCGATTGATTTGCAATGGATGCATGTGTTGAGTGAAGGTTGGGCTAGTCCTCTTCGTGGGTTTATGAGGGAATCTGAGTTCCTCCAAACTCTTCATTTCAATTTGTTGAATCTCGATGATGGGTCTGTTGTTAATATGTCTGTGCCTATTGTTCTTGCGATTGATGATCAACAAAAAGCCCTAATCGGTGAATCTAAACGTGTCTCCCTTGTTGATTCTGATGATAATCCAATCGCTATTCTCAATGATATTGAGATTTATAAACATCCGAAAGAAGAGCGAATAGCGAGAACTTGGGGTACGACTGCACCGGGTTTGCCTTATGTAGAAGAGGCGATAACCAATGCTGGAGACTGGCTCATTGGGGGTGATCTTGAGGTTTTGGAACCTGTTAAGTACAATGATGGGCTTGATCGTTTCAGGCTTTCCCCGTTTGAACTGCGTAAGGAGCTAGAGAAACGTGGTGCGGATGCGGTCTTTGCGTTTCAGCTTAGGAACCCAGTTCATAATGGACATGCTCTTCTTATGACTGATACTCGTAGGAGACTTCTTGAGATGGGTTATAAAAACCCTATCCTTTTGCTTCATCCATTGGGAGGGTTTACAAAAGCTGATGATGTTCCTCTAAGCTGGCGAATGAAACAGCACGAGAAGGTGCTAGAGGATGGTGTTCTTGATCCAGAGACTACTGTGGTTTCCATATTCCCATCTCCAATGCTCTATGCTGGTCCAACCGAAGTCCAATGGCACGCAAAGGCTAGGATCAATGCTGGTGCTAACTTCTACATTGTCGGTAGGGATCCGGCTGGAATGGGTCATCCCGTGGAGAAACGTGATCTGTACGATGCTGATCACGGGAAGAAAGTTCTAAGCATGGCTCCTGGACTCGAACGACTCAACATTCTTCCTTTCAGGGTTGCTGCGTACGATAAGACACAAGGAAAGATGGCTTTCTTTGATCCCTCAAGGGCTCAGGACTTCTTGTTCATTTCTGGCACTAAGATGAGAGCATTGGCAAAGAACAGAGAGAACCCACCAGATGGATTTATGTGCCCTGGAGGCTGGAAAGTCCTTGTGGATTACTACGACAGTTTGACACTAACCGGAAACACCAAACTTCCGGAAAAGATTCCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0001887 GO:0003674 GO:0003824 GO:0004020 GO:0004779 GO:0004781 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006790 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009719 GO:0009725 GO:0009735 GO:0009970 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016779 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050896 GO:0051259 GO:0051716 GO:0065003 GO:0070206 GO:0070566 GO:0071496 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00230 ko00261 ko00450 ko00920 ko01100 ko01120 ko01130 map00230 map00261 map00450 map00920 map01100 map01120 map01130

Pfam Domains

Protein Families

ATP-sulfurylase PUA_2

Protein Analysis

465

Amino Acids

52.03

Weight (kDa)

6.89

Isoelectric Point (pI)

49.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA_2	PF14306	53 - 215	8e-46	PUA-like domain
ATP-sulfurylase	PF01747	225 - 446	2.1e-65	ATP-sulfurylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22890 AT4G14680 AT4G14680 AT5G43780
fragaria_vesca	FvH4_4g01660
malus_domestica	MD13G1201500.v1.1 MD16G1201400.v1.1
prunus_persica	Prupe.1G023000_v2.0.a1
pyrus_communis	pycom13g17480 pycom16g17000
rosa_chinensis	RchiOBHm_Chr4g0388281
rosa_laevigata	RLG00000010068
rosa_multiflora	Rmu_sc0000753.1_g000031 Rmu_sc0001949.1_g000019
rosa_roxburghii	Rroxscaffold_5G00334740
rosa_rugosa	Rorug03G0316600
rosa_samantha	Rh4AG022000 Rh4BG015900 Rh4CG022500 Rh4DG016800
rosa_wichuraiana	Rw4G001450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	519, 822
AccB7I	CCANNNNNTGG	2 cut(s)	170, 1298
AccIII	TCCGGA	1 cut(s)	1378
AciI	CCGC	4 cut(s)	230, 233, 725, 731
AclWI	GGATC	6 cut(s)	192, 929, 1028, 1052, 1065, 1211
AcsI	RAATTY	1 cut(s)	109
AfaI	GTAC	6 cut(s)	144, 195, 559, 656, 1100, 1184
AfiI	CCNNNNNNNGG	4 cut(s)	170, 314, 854, 1298
AflII	CTTAAG	1 cut(s)	127
AflIII	ACRYGT	1 cut(s)	457
AgsI	TTSAA	3 cut(s)	358, 367, 695
AjnI	CCWGG	2 cut(s)	1138, 1312
AloI	GAACNNNNNNTCC	4 cut(s)	320, 352, 1226, 1258
AluBI	AGCT	6 cut(s)	126, 149, 709, 748, 869, 888
AluI	AGCT	6 cut(s)	126, 149, 709, 748, 869, 888
Alw26I	GTCTC	5 cut(s)	199, 466, 603, 796, 935
AlwI	GGATC	6 cut(s)	192, 929, 1028, 1052, 1065, 1211
Aor13HI	TCCGGA	1 cut(s)	1378
ApeKI	GCWGC	1 cut(s)	1178
ApoI	RAATTY	1 cut(s)	109
Asp700I	GAANNNNTTC	1 cut(s)	1386
AspS9I	GGNCC	1 cut(s)	986
AsuC2I	CCSGG	1 cut(s)	570
AsuHPI	GGTGA	2 cut(s)	458, 638
AsuII	TTCGAA	2 cut(s)	107, 113
AvaII	GGWCC	1 cut(s)	986
BaeGI	GKGCMC	1 cut(s)	1313
BamHI	GGATCC	1 cut(s)	1057
BanII	GRGCYC	1 cut(s)	1231
BauI	CACGAG	1 cut(s)	905
BbsI	GAAGAC	1 cut(s)	13
BbvI	GCAGC	1 cut(s)	1165
BccI	CCATC	9 cut(s)	143, 161, 371, 656, 808, 917, 973, 1198, 1292
BceAI	ACGGC	2 cut(s)	224, 273
BcgI	CGANNNNNNTGC	2 cut(s)	250, 284
BciT130I	CCWGG	2 cut(s)	1140, 1314
BclI	TGATCA	2 cut(s)	424, 1108
BcnI	CCSGG	1 cut(s)	570
BcoDI	GTCTC	5 cut(s)	199, 466, 603, 796, 935
BfaI	CTAG	4 cut(s)	303, 710, 917, 1017
BfrI	CTTAAG	1 cut(s)	127
BglI	GCCNNNNNGGC	1 cut(s)	1317
BisI	GCNGC	2 cut(s)	231, 1179
BlsI	GCNGC	2 cut(s)	232, 1180
Bme1390I	CCNGG	3 cut(s)	570, 1140, 1314
Bme18I	GGWCC	1 cut(s)	986
BmgT120I	GGNCC	1 cut(s)	986
BmiI	GGNNCC	5 cut(s)	201, 645, 755, 1059, 1137
BmrFI	CCNGG	3 cut(s)	570, 1140, 1314
BmrI	ACTGGG	1 cut(s)	752
BmsI	GCATC	3 cut(s)	267, 718, 1093
BmuI	ACTGGG	1 cut(s)	752
BpiI	GAAGAC	1 cut(s)	13
BplI	GAGNNNNNCTC	2 cut(s)	600, 632
BpmI	CTGGAG	2 cut(s)	627, 1335
Bpu10I	CCTNAGC	2 cut(s)	749, 1230
Bpu14I	TTCGAA	2 cut(s)	107, 113
BpuEI	CTTGAG	3 cut(s)	653, 830, 1207
BpuMI	CCSGG	1 cut(s)	570
BsaBI	GATNNNNATC	2 cut(s)	483, 1107
BsaJI	CCNNGG	2 cut(s)	1080, 1312
BsaWI	WCCGGW	4 cut(s)	196, 1361, 1378, 1390
Bsc4I	CCNNNNNNNGG	4 cut(s)	170, 314, 854, 1298
Bse1I	ACTGG	2 cut(s)	617, 758
Bse3DI	GCAATG	1 cut(s)	278
Bse8I	GATNNNNATC	2 cut(s)	483, 1107
BseAI	TCCGGA	1 cut(s)	1378
BseBI	CCWGG	2 cut(s)	1140, 1314
BseDI	CCNNGG	2 cut(s)	1080, 1312
BseGI	GGATG	7 cut(s)	89, 282, 523, 733, 844, 928, 1075
BseJI	GATNNNNATC	2 cut(s)	483, 1107
BseLI	CCNNNNNNNGG	4 cut(s)	170, 314, 854, 1298
BseMI	GCAATG	1 cut(s)	278
BseMII	CTCAG	2 cut(s)	324, 1244
BseNI	ACTGG	2 cut(s)	617, 758
BseSI	GKGCMC	1 cut(s)	1313
BseXI	GCAGC	1 cut(s)	1165
BsgI	GTGCAG	1 cut(s)	549
BsiSI	CCGG	6 cut(s)	197, 569, 1061, 1362, 1379, 1391
BsiWI	CGTACG	1 cut(s)	1182
BslI	CCNNNNNNNGG	4 cut(s)	170, 314, 854, 1298
BsmAI	GTCTC	5 cut(s)	199, 466, 603, 796, 935
BsmBI	CGTCTC	1 cut(s)	199
Bsp119I	TTCGAA	2 cut(s)	107, 113
Bsp1286I	GDGCHC	2 cut(s)	1231, 1313
Bsp13I	TCCGGA	1 cut(s)	1378
BspACI	CCGC	4 cut(s)	230, 233, 725, 731
BspCNI	CTCAG	2 cut(s)	325, 1243
BspEI	TCCGGA	1 cut(s)	1378
BspLI	GGNNCC	5 cut(s)	201, 645, 755, 1059, 1137
BspPI	GGATC	6 cut(s)	192, 929, 1028, 1052, 1065, 1211
BspQI	GCTCTTC	2 cut(s)	528, 783
BspT104I	TTCGAA	2 cut(s)	107, 113
BspTI	CTTAAG	1 cut(s)	127
BsrDI	GCAATG	1 cut(s)	278
BsrI	ACTGG	2 cut(s)	617, 758
BssECI	CCNNGG	2 cut(s)	1080, 1312
BssSI	CACGAG	1 cut(s)	905
Bst2BI	CACGAG	1 cut(s)	905
Bst2UI	CCWGG	2 cut(s)	1140, 1314
Bst4CI	ACNGT	3 cut(s)	19, 949, 1349
Bst6I	CTCTTC	5 cut(s)	315, 354, 528, 582, 783
BstAFI	CTTAAG	1 cut(s)	127
BstAPI	GCANNNNNTGC	1 cut(s)	277
BstBI	TTCGAA	2 cut(s)	107, 113
BstC8I	GCNNGC	3 cut(s)	151, 890, 1008
BstDEI	CTNAG	6 cut(s)	333, 749, 884, 1127, 1230, 1257
BstDSI	CCRYGG	1 cut(s)	1080
BstF5I	GGATG	7 cut(s)	89, 282, 523, 733, 844, 928, 1075
BstMAI	GTCTC	5 cut(s)	199, 466, 603, 796, 935
BstMWI	GCNNNNNNNGC	4 cut(s)	277, 706, 737, 1317
BstNI	CCWGG	2 cut(s)	1140, 1314
BstNSI	RCATGY	2 cut(s)	284, 776
BstSCI	CCNGG	3 cut(s)	568, 1138, 1312
BstSLI	GKGCMC	1 cut(s)	1313
BstV1I	GCAGC	1 cut(s)	1165
BstV2I	GAAGAC	1 cut(s)	13
BstX2I	RGATCY	2 cut(s)	184, 1057
BstYI	RGATCY	2 cut(s)	184, 1057
BtgI	CCRYGG	1 cut(s)	1080
BtsCI	GGATG	7 cut(s)	89, 282, 523, 733, 844, 928, 1075
Cac8I	GCNNGC	3 cut(s)	151, 890, 1008
Cfr13I	GGNCC	1 cut(s)	986
Csp6I	GTAC	6 cut(s)	143, 194, 558, 655, 1099, 1183
CviAII	CATG	4 cut(s)	10, 281, 773, 1132
CviQI	GTAC	6 cut(s)	143, 194, 558, 655, 1099, 1183
DdeI	CTNAG	6 cut(s)	333, 749, 884, 1127, 1230, 1257
Eam1104I	CTCTTC	5 cut(s)	315, 354, 528, 582, 783
EarI	CTCTTC	5 cut(s)	315, 354, 528, 582, 783
EciI	GGCGGA	1 cut(s)	248
Eco24I	GRGCYC	1 cut(s)	1231
Eco47I	GGWCC	1 cut(s)	986
EcoRI	GAATTC	1 cut(s)	109
EcoRII	CCWGG	2 cut(s)	1138, 1312
EcoT22I	ATGCAT	1 cut(s)	282
EcoT38I	GRGCYC	1 cut(s)	1231
Esp3I	CGTCTC	1 cut(s)	199
FaeI	CATG	4 cut(s)	13, 284, 776, 1135
FatI	CATG	4 cut(s)	9, 280, 772, 1131
FbaI	TGATCA	2 cut(s)	424, 1108
Fnu4HI	GCNGC	2 cut(s)	231, 1179
FokI	GGATG	7 cut(s)	76, 289, 510, 740, 831, 935, 1062
FriOI	GRGCYC	1 cut(s)	1231
Fsp4HI	GCNGC	2 cut(s)	231, 1179
FspBI	CTAG	4 cut(s)	303, 710, 917, 1017
GluI	GCNGC	2 cut(s)	231, 1179
GsuI	CTGGAG	2 cut(s)	627, 1335
HapII	CCGG	6 cut(s)	197, 569, 1061, 1362, 1379, 1391
Hin1II	CATG	4 cut(s)	13, 284, 776, 1135
HinfI	GANTC	8 cut(s)	77, 329, 367, 449, 473, 1143, 1152, 1387
HpaII	CCGG	6 cut(s)	197, 569, 1061, 1362, 1379, 1391
HphI	GGTGA	2 cut(s)	458, 638
Hpy166II	GTNNAC	2 cut(s)	15, 861
Hpy188I	TCNGA	4 cut(s)	76, 334, 478, 528
Hpy188III	TCNNGA	7 cut(s)	371, 632, 809, 932, 938, 1232, 1379
Hpy8I	GTNNAC	2 cut(s)	15, 861
HpyAV	CCTTC	3 cut(s)	114, 287, 904
HpyCH4III	ACNGT	3 cut(s)	19, 949, 1349
HpyCH4IV	ACGT	3 cut(s)	457, 718, 1090
HpyCH4V	TGCA	3 cut(s)	271, 280, 566
HpyF10VI	GCNNNNNNNGC	4 cut(s)	277, 706, 737, 1317
HpyF3I	CTNAG	6 cut(s)	333, 749, 884, 1127, 1230, 1257
HpySE526I	ACGT	3 cut(s)	457, 718, 1090
Hsp92II	CATG	4 cut(s)	13, 284, 776, 1135
Kpn2I	TCCGGA	1 cut(s)	1378
Ksp22I	TGATCA	2 cut(s)	424, 1108
LguI	GCTCTTC	2 cut(s)	528, 783
LmnI	GCTCC	2 cut(s)	706, 1141
Lsp1109I	GCAGC	1 cut(s)	1165
LweI	GCATC	3 cut(s)	267, 718, 1093
MaeI	CTAG	4 cut(s)	303, 710, 917, 1017
MaeII	ACGT	3 cut(s)	457, 718, 1090
MaeIII	GTNAC	1 cut(s)	82
MboII	GAAGA	9 cut(s)	13, 229, 302, 341, 545, 599, 770, 1129, 1154
MflI	RGATCY	2 cut(s)	184, 1057
MhlI	GDGCHC	2 cut(s)	1231, 1313
MluCI	AATT	2 cut(s)	109, 358
MlyI	GAGTC	2 cut(s)	1137, 1146
MmeI	TCCRAC	1 cut(s)	1013
Mph1103I	ATGCAT	1 cut(s)	282
MroI	TCCGGA	1 cut(s)	1378
MroXI	GAANNNNTTC	1 cut(s)	1386
MseI	TTAA	5 cut(s)	128, 155, 390, 651, 1396
MslI	CAYNNNNRTG	1 cut(s)	1259
MspCI	CTTAAG	1 cut(s)	127
MspI	CCGG	6 cut(s)	197, 569, 1061, 1362, 1379, 1391
MspR9I	CCNGG	3 cut(s)	570, 1140, 1314
MvaI	CCWGG	2 cut(s)	1140, 1314
MwoI	GCNNNNNNNGC	4 cut(s)	277, 706, 737, 1317
NciI	CCSGG	1 cut(s)	570
NlaIII	CATG	4 cut(s)	13, 284, 776, 1135
NlaIV	GGNNCC	5 cut(s)	201, 645, 755, 1059, 1137
NmeAIII	GCCGAG	1 cut(s)	267
NsiI	ATGCAT	1 cut(s)	282
NspI	RCATGY	2 cut(s)	284, 776
NspV	TTCGAA	2 cut(s)	107, 113
PciSI	GCTCTTC	2 cut(s)	528, 783
PdmI	GAANNNNTTC	1 cut(s)	1386
PfeI	GAWTC	6 cut(s)	77, 329, 367, 449, 473, 1387
Pfl23II	CGTACG	1 cut(s)	1182
PflMI	CCANNNNNTGG	2 cut(s)	170, 1298
PfoI	TCCNGGA	1 cut(s)	1138
PkrI	GCNGC	2 cut(s)	232, 1180
PleI	GAGTC	2 cut(s)	1137, 1146
PpsI	GAGTC	2 cut(s)	1137, 1146
PsiI	TTATAA	2 cut(s)	519, 822
Psp6I	CCWGG	2 cut(s)	1138, 1312
PspGI	CCWGG	2 cut(s)	1138, 1312
PspLI	CGTACG	1 cut(s)	1182
PspN4I	GGNNCC	5 cut(s)	201, 645, 755, 1059, 1137
PspPI	GGNCC	1 cut(s)	986
PsrI	GAACNNNNNNTAC	2 cut(s)	541, 573
PsuI	RGATCY	2 cut(s)	184, 1057
RsaI	GTAC	6 cut(s)	144, 195, 559, 656, 1100, 1184
RsaNI	GTAC	6 cut(s)	143, 194, 558, 655, 1099, 1183
RseI	CAYNNNNRTG	1 cut(s)	1259
SapI	GCTCTTC	2 cut(s)	528, 783
SaqAI	TTAA	5 cut(s)	128, 155, 390, 651, 1396
SatI	GCNGC	2 cut(s)	231, 1179
Sau96I	GGNCC	1 cut(s)	986
SchI	GAGTC	2 cut(s)	1137, 1146
ScrFI	CCNGG	3 cut(s)	570, 1140, 1314
SduI	GDGCHC	2 cut(s)	1231, 1313
SfaNI	GCATC	3 cut(s)	267, 718, 1093
SfuI	TTCGAA	2 cut(s)	107, 113
SinI	GGWCC	1 cut(s)	986
SmiMI	CAYNNNNRTG	1 cut(s)	1259
SmlI	CTYRAG	4 cut(s)	127, 632, 809, 1222
SmoI	CTYRAG	4 cut(s)	127, 632, 809, 1222
Sse9I	AATT	2 cut(s)	109, 358
SsiI	CCGC	4 cut(s)	230, 233, 725, 731
SspMI	CTAG	4 cut(s)	303, 710, 917, 1017
StyD4I	CCNGG	3 cut(s)	568, 1138, 1312
TaaI	ACNGT	3 cut(s)	19, 949, 1349
TaiI	ACGT	3 cut(s)	460, 721, 1093
TaqI	TCGA	5 cut(s)	107, 113, 159, 372, 1146
TasI	AATT	2 cut(s)	109, 358
TatI	WGTACW	1 cut(s)	654
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	6 cut(s)	77, 329, 367, 449, 473, 1387
Tru1I	TTAA	5 cut(s)	128, 155, 390, 651, 1396
Tru9I	TTAA	5 cut(s)	128, 155, 390, 651, 1396
TseI	GCWGC	1 cut(s)	1178
TspDTI	ATGAA	7 cut(s)	31, 87, 341, 752, 833, 911, 1234
TspGWI	ACGGA	1 cut(s)	70
Van91I	CCANNNNNTGG	2 cut(s)	170, 1298
Vha464I	CTTAAG	1 cut(s)	127
VpaK11BI	GGWCC	1 cut(s)	986
XapI	RAATTY	1 cut(s)	109
XceI	RCATGY	2 cut(s)	284, 776
XmnI	GAANNNNTTC	1 cut(s)	1386
XspI	CTAG	4 cut(s)	303, 710, 917, 1017
Zsp2I	ATGCAT	1 cut(s)	282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.