Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0009911

Physical Location & Seq

Genomic Coordinates Reverse (-)

62644163 .. 62646973

Gene Structure 2811 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010068

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCGTCCATGGCTACCTTCATCGCCCAAACCCCCTACCCACATCACTCTTTCCCCAAAAAGCTCCACACCCATTTCGCCCCGACCCTCAAGCTCTCGCTCCGACCCGTTTCCACCCCCAAGACCCGCCAAAGGCTCCGAATTTCTAGCGGGCTGATCGAACCCGACGGCGGGAAACTCGTCGAGCTTTTCGTGCCGGAGTCGGAAAAGGCCGAGAAGAAGAGAGAGGCGGCGACGCTGCCGAGAATCAAGTTGTCAAGAATCGATCTTGAATGGGTTCATGTGATCAGCGAAGGCTGGTCGAGTCCTCTAACTGGGTTCATGAGAGAATCCGAGTTCCTCCAAACTCTTCATTTCAATTCGCTCCGACTCGACGACGGGTCGTTTGTGAATATGTCGGTGCCGATCGTTTTGGCCATCGACGACGCTCAGAAACGCCAAATCGGCGAGTCGACCCGAGTCGCCCTCGTTGATTCCGACAATAATCTGATCGCCATTCTCAATGACATTGAGATCTATAAGCACCATAAAGAAGAACGCATTGCCAGGACTTGGGGGACAACCGCCCCTGGTTTGCCGTATGTTGATGAAGCCATAACCAACGCTGGAAACTGGCTGATTGGAGGTGACTTAGAGGTCATGGAGCCCATTAAGTACAATGATGGCCTTGATCGCTTCCGATTATCTCCTACAGAACTCCGCGATGAATTCACAAAGCGCAATGCTGATGCAGTATTTGCATTCCAACTGCGGAACCCTGTGCACAATGGGCATGCTTTGCTAATGACTGATACACGTCGCCGGCTTCTTGAGATGGGCTACAAGAACCCCATTCTCTTGCTTCATCCACTAGGAGGCTATACTAAGGCAGATGATGTTCCACTTACTTGGCGCATGAAGCAACATGAGAAGGTTCTTGAGGATGGTGTTCTTGATCCCGAGACGACTGTGGTTTCCATATTTCCCTCTCCTATGCACTATGCCGGCCCTACTGAGGTGCAGTGGCATGCAAAGGCTAGGATAAATGCGGGGGCTAACTTTTACATCGTTGGTCGGGACCCAGCTGGAATGGGCCATCCAATTGAGAAAAGGGATCTATATGATGCCGACCATGGGAAGAAAGTACTGAGCATGGCACCTGGACTAGAGCGCCTCAATATCCTTCCTTTCAAGGTTGCTGCATACGATAAAACTCAGGGGAAAATGGCATTTTTCGAACCGTCAAGGGCTCAGGACTTCATTTTCATATCGGGCACCAAGATGCGAACACTTGCAAGGAACAAGGAGAACCCTCCTGAAGGATTCATGTGCCCTGGTGGCTGGAAAGTCCTGGTGGACTACTATGACAGTTTGGTTCCTGCAGACAGCGGGAAAGTCCCAGAAGCAGTTCCTGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0001887 GO:0003674 GO:0003824 GO:0004020 GO:0004779 GO:0004781 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0006790 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009719 GO:0009725 GO:0009735 GO:0009970 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016779 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050896 GO:0051259 GO:0051716 GO:0065003 GO:0070206 GO:0070566 GO:0071496 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00230 ko00261 ko00450 ko00920 ko01100 ko01120 ko01130 map00230 map00261 map00450 map00920 map01100 map01120 map01130

Pfam Domains

Protein Families

ATP-sulfurylase PUA_2

Protein Analysis

466

Amino Acids

52.28

Weight (kDa)

6.99

Isoelectric Point (pI)

49.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA_2	PF14306	53 - 215	5.3e-47	PUA-like domain
ATP-sulfurylase	PF01747	225 - 446	5e-67	ATP-sulfurylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22890 AT4G14680 AT4G14680 AT5G43780
fragaria_vesca	FvH4_4g01660
malus_domestica	MD13G1201500.v1.1 MD16G1201400.v1.1
prunus_persica	Prupe.1G023000_v2.0.a1
pyrus_communis	pycom13g17480 pycom16g17000
rosa_chinensis	RchiOBHm_Chr4g0388281
rosa_laevigata	RLG00000010068
rosa_multiflora	Rmu_sc0000753.1_g000031 Rmu_sc0001949.1_g000019
rosa_roxburghii	Rroxscaffold_5G00334740
rosa_rugosa	Rorug03G0316600
rosa_samantha	Rh4AG022000 Rh4BG015900 Rh4CG022500 Rh4DG016800
rosa_wichuraiana	Rw4G001450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	635
AccB1I	GGYRCC	3 cut(s)	400, 1135, 1253
AccB7I	CCANNNNNTGG	1 cut(s)	552
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	1 cut(s)	702
AciI	CCGC	9 cut(s)	127, 150, 171, 230, 564, 700, 751, 1028, 1368
AclWI	GGATC	2 cut(s)	929, 1101
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	2 cut(s)	141, 707
AcuI	CTGAAG	1 cut(s)	1317
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	2 cut(s)	656, 1125
AfiI	CCNNNNNNNGG	9 cut(s)	132, 170, 171, 314, 552, 854, 994, 1113, 1298
AflIII	ACRYGT	1 cut(s)	794
AgsI	TTSAA	3 cut(s)	272, 358, 1171
AhdI	GACNNNNNGTC	1 cut(s)	379
AjiI	CACGTC	1 cut(s)	797
AjnI	CCWGG	5 cut(s)	545, 568, 1138, 1312, 1329
AluBI	AGCT	4 cut(s)	64, 94, 187, 1064
AluI	AGCT	4 cut(s)	64, 94, 187, 1064
Alw21I	GWGCWC	1 cut(s)	765
Alw26I	GTCTC	1 cut(s)	935
Alw44I	GTGCAC	1 cut(s)	761
AlwI	GGATC	2 cut(s)	929, 1101
AlwNI	CAGNNNCTG	1 cut(s)	1391
Ama87I	CYCGRG	2 cut(s)	456, 938
AoxI	GGCC	5 cut(s)	210, 414, 664, 985, 1072
ApaLI	GTGCAC	1 cut(s)	761
ApeKI	GCWGC	2 cut(s)	238, 1178
ApoI	RAATTY	2 cut(s)	141, 707
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
Asp700I	GAANNNNTTC	2 cut(s)	276, 1386
AspLEI	GCGC	3 cut(s)	720, 894, 1152
AspS9I	GGNCC	3 cut(s)	986, 1057, 1072
AsuHPI	GGTGA	1 cut(s)	638
AsuII	TTCGAA	1 cut(s)	1215
AvaI	CYCGRG	2 cut(s)	456, 938
AvaII	GGWCC	1 cut(s)	1057
BaeGI	GKGCMC	3 cut(s)	765, 1256, 1313
BalI	TGGCCA	1 cut(s)	416
BanI	GGYRCC	3 cut(s)	400, 1135, 1253
BanII	GRGCYC	2 cut(s)	648, 1231
Bbv12I	GWGCWC	1 cut(s)	765
BbvI	GCAGC	2 cut(s)	225, 1165
BccI	CCATC	5 cut(s)	425, 656, 808, 917, 1083
BceAI	ACGGC	2 cut(s)	184, 562
BciT130I	CCWGG	5 cut(s)	547, 570, 1140, 1314, 1331
BclI	TGATCA	1 cut(s)	285
BcoDI	GTCTC	1 cut(s)	935
BfaI	CTAG	4 cut(s)	147, 851, 1017, 1145
BfmI	CTRYAG	2 cut(s)	690, 1359
BfoI	RGCGCY	1 cut(s)	1153
BglI	GCCNNNNNGGC	2 cut(s)	444, 1317
BglII	AGATCT	1 cut(s)	513
BisI	GCNGC	3 cut(s)	231, 239, 1179
BlsI	GCNGC	3 cut(s)	232, 240, 1180
BmcAI	AGTACT	1 cut(s)	1125
Bme1390I	CCNGG	5 cut(s)	547, 570, 1140, 1314, 1331
Bme18I	GGWCC	1 cut(s)	1057
BmeRI	GACNNNNNGTC	1 cut(s)	379
BmeT110I	CYCGRG	2 cut(s)	456, 938
BmgBI	CACGTC	1 cut(s)	797
BmgT120I	GGNCC	3 cut(s)	986, 1057, 1072
BmiI	GGNNCC	9 cut(s)	137, 402, 645, 755, 1058, 1059, 1137, 1255, 1356
BmrFI	CCNGG	5 cut(s)	547, 570, 1140, 1314, 1331
BmrI	ACTGGG	1 cut(s)	324
BmsI	GCATC	3 cut(s)	718, 1093, 1251
BmuI	ACTGGG	1 cut(s)	324
BoxI	GACNNNNGTC	1 cut(s)	458
BplI	GAGNNNNNCTC	2 cut(s)	450, 482
Bpu10I	CCTNAGC	1 cut(s)	1230
Bpu14I	TTCGAA	1 cut(s)	1215
BpuEI	CTTGAG	3 cut(s)	74, 830, 938
Bsa29I	ATCGAT	1 cut(s)	264
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	4 cut(s)	9, 568, 1111, 1312
Bsc4I	CCNNNNNNNGG	9 cut(s)	132, 170, 171, 314, 552, 854, 994, 1113, 1298
Bse118I	RCCGGY	2 cut(s)	801, 983
Bse1I	ACTGG	2 cut(s)	319, 617
Bse3DI	GCAATG	2 cut(s)	540, 727
BseBI	CCWGG	5 cut(s)	547, 570, 1140, 1314, 1331
BseCI	ATCGAT	1 cut(s)	264
BseDI	CCNNGG	4 cut(s)	9, 568, 1111, 1312
BseGI	GGATG	3 cut(s)	844, 928, 1075
BseLI	CCNNNNNNNGG	9 cut(s)	132, 170, 171, 314, 552, 854, 994, 1113, 1298
BseMI	GCAATG	2 cut(s)	540, 727
BseMII	CTCAG	5 cut(s)	443, 984, 1118, 1208, 1244
BseNI	ACTGG	2 cut(s)	319, 617
BseSI	GKGCMC	3 cut(s)	765, 1256, 1313
BseXI	GCAGC	2 cut(s)	225, 1165
BseYI	CCCAGC	1 cut(s)	1060
BsgI	GTGCAG	1 cut(s)	1019
Bsh1236I	CGCG	1 cut(s)	702
Bsh1285I	CGRYCG	1 cut(s)	408
BshFI	GGCC	5 cut(s)	212, 416, 666, 987, 1074
BshNI	GGYRCC	3 cut(s)	400, 1135, 1253
BshVI	ATCGAT	1 cut(s)	264
BsiEI	CGRYCG	1 cut(s)	408
BsiHKAI	GWGCWC	1 cut(s)	765
BsiHKCI	CYCGRG	2 cut(s)	456, 938
BsiSI	CCGG	3 cut(s)	197, 802, 984
BslFI	GGGAC	3 cut(s)	571, 1070, 1361
BslI	CCNNNNNNNGG	9 cut(s)	132, 170, 171, 314, 552, 854, 994, 1113, 1298
BsmAI	GTCTC	1 cut(s)	935
BsmBI	CGTCTC	1 cut(s)	935
BsmFI	GGGAC	3 cut(s)	571, 1070, 1361
BsmI	GAATGC	1 cut(s)	740
BsnI	GGCC	5 cut(s)	212, 416, 666, 987, 1074
BsoBI	CYCGRG	2 cut(s)	456, 938
Bsp119I	TTCGAA	1 cut(s)	1215
Bsp1286I	GDGCHC	5 cut(s)	648, 765, 1231, 1256, 1313
Bsp143I	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
Bsp19I	CCATGG	2 cut(s)	9, 1111
BspACI	CCGC	9 cut(s)	127, 150, 171, 230, 564, 700, 751, 1028, 1368
BspANI	GGCC	5 cut(s)	212, 416, 666, 987, 1074
BspCNI	CTCAG	5 cut(s)	442, 985, 1119, 1207, 1243
BspDI	ATCGAT	1 cut(s)	264
BspFNI	CGCG	1 cut(s)	702
BspHI	TCATGA	1 cut(s)	321
BspLI	GGNNCC	9 cut(s)	137, 402, 645, 755, 1058, 1059, 1137, 1255, 1356
BspMAI	CTGCAG	1 cut(s)	1363
BspPI	GGATC	2 cut(s)	929, 1101
BspT104I	TTCGAA	1 cut(s)	1215
BspT107I	GGYRCC	3 cut(s)	400, 1135, 1253
BsrDI	GCAATG	2 cut(s)	540, 727
BsrFI	RCCGGY	2 cut(s)	801, 983
BsrI	ACTGG	2 cut(s)	319, 617
BssAI	RCCGGY	2 cut(s)	801, 983
BssECI	CCNNGG	4 cut(s)	9, 568, 1111, 1312
BssMI	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	9, 1111
Bst2UI	CCWGG	5 cut(s)	547, 570, 1140, 1314, 1331
Bst4CI	ACNGT	3 cut(s)	949, 1221, 1349
Bst6I	CTCTTC	2 cut(s)	215, 354
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	3 cut(s)	737, 778, 1391
BstBI	TTCGAA	1 cut(s)	1215
BstC8I	GCNNGC	5 cut(s)	152, 774, 803, 985, 1008
BstDEI	CTNAG	7 cut(s)	429, 631, 864, 993, 1127, 1194, 1230
BstDSI	CCRYGG	2 cut(s)	9, 1111
BstENI	CCTNNNNNAGG	1 cut(s)	1296
BstF5I	GGATG	3 cut(s)	844, 928, 1075
BstFNI	CGCG	1 cut(s)	702
BstH2I	RGCGCY	1 cut(s)	1153
BstHHI	GCGC	3 cut(s)	720, 894, 1152
BstKTI	GATC	9 cut(s)	159, 268, 288, 408, 492, 516, 673, 937, 1096
BstMAI	GTCTC	1 cut(s)	935
BstMBI	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
BstMCI	CGRYCG	1 cut(s)	408
BstNI	CCWGG	5 cut(s)	547, 570, 1140, 1314, 1331
BstNSI	RCATGY	2 cut(s)	776, 1010
BstPAI	GACNNNNGTC	1 cut(s)	458
BstSCI	CCNGG	5 cut(s)	545, 568, 1138, 1312, 1329
BstSFI	CTRYAG	2 cut(s)	690, 1359
BstSLI	GKGCMC	3 cut(s)	765, 1256, 1313
BstUI	CGCG	1 cut(s)	702
BstV1I	GCAGC	2 cut(s)	225, 1165
BstX2I	RGATCY	2 cut(s)	513, 1093
BstXI	CCANNNNNNTGG	1 cut(s)	888
BstYI	RGATCY	2 cut(s)	513, 1093
Bsu15I	ATCGAT	1 cut(s)	264
BsuRI	GGCC	5 cut(s)	212, 416, 666, 987, 1074
BsuTUI	ATCGAT	1 cut(s)	264
BtgI	CCRYGG	2 cut(s)	9, 1111
BtgZI	GCGATG	2 cut(s)	7, 717
BtrI	CACGTC	1 cut(s)	797
BtsCI	GGATG	3 cut(s)	844, 928, 1075
BtsI	GCAGTG	1 cut(s)	1007
BtsIMutI	CAGTG	1 cut(s)	1007
Cac8I	GCNNGC	5 cut(s)	152, 774, 803, 985, 1008
CaiI	CAGNNNCTG	1 cut(s)	1391
CciI	TCATGA	1 cut(s)	321
CfoI	GCGC	3 cut(s)	720, 894, 1152
Cfr10I	RCCGGY	2 cut(s)	801, 983
Cfr13I	GGNCC	3 cut(s)	986, 1057, 1072
ClaI	ATCGAT	1 cut(s)	264
CseI	GACGC	2 cut(s)	244, 434
Csp6I	GTAC	2 cut(s)	655, 1124
CviQI	GTAC	2 cut(s)	655, 1124
DdeI	CTNAG	7 cut(s)	429, 631, 864, 993, 1127, 1194, 1230
DpnI	GATC	9 cut(s)	158, 267, 287, 407, 491, 515, 672, 936, 1095
DpnII	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
DrdI	GACNNNNNNGTC	1 cut(s)	635
DriI	GACNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	635
EaeI	YGGCCR	1 cut(s)	414
Eam1104I	CTCTTC	2 cut(s)	215, 354
Eam1105I	GACNNNNNGTC	1 cut(s)	379
EarI	CTCTTC	2 cut(s)	215, 354
Eco130I	CCWWGG	2 cut(s)	9, 1111
Eco24I	GRGCYC	2 cut(s)	648, 1231
Eco47I	GGWCC	1 cut(s)	1057
Eco57I	CTGAAG	1 cut(s)	1317
Eco88I	CYCGRG	2 cut(s)	456, 938
EcoNI	CCTNNNNNAGG	1 cut(s)	1296
EcoO109I	RGGNCCY	1 cut(s)	1057
EcoRI	GAATTC	1 cut(s)	707
EcoRII	CCWGG	5 cut(s)	545, 568, 1138, 1312, 1329
EcoT14I	CCWWGG	2 cut(s)	9, 1111
EcoT38I	GRGCYC	2 cut(s)	648, 1231
ErhI	CCWWGG	2 cut(s)	9, 1111
Esp3I	CGTCTC	1 cut(s)	935
FaqI	GGGAC	3 cut(s)	571, 1070, 1361
FauI	CCCGC	5 cut(s)	134, 143, 164, 1021, 1361
FbaI	TGATCA	1 cut(s)	285
FblI	GTMKAC	1 cut(s)	452
Fnu4HI	GCNGC	3 cut(s)	231, 239, 1179
FokI	GGATG	3 cut(s)	831, 935, 1062
FriOI	GRGCYC	2 cut(s)	648, 1231
Fsp4HI	GCNGC	3 cut(s)	231, 239, 1179
FspBI	CTAG	4 cut(s)	147, 851, 1017, 1145
GlaI	GCGC	3 cut(s)	719, 893, 1151
GluI	GCNGC	3 cut(s)	231, 239, 1179
GsaI	CCCAGC	1 cut(s)	1064
HaeII	RGCGCY	1 cut(s)	1153
HaeIII	GGCC	5 cut(s)	212, 416, 666, 987, 1074
HapII	CCGG	3 cut(s)	197, 802, 984
HgaI	GACGC	2 cut(s)	244, 434
HhaI	GCGC	3 cut(s)	720, 894, 1152
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	3 cut(s)	718, 892, 1150
HinP1I	GCGC	3 cut(s)	718, 892, 1150
HincII	GTYRAC	1 cut(s)	453
HindII	GTYRAC	1 cut(s)	453
HpaII	CCGG	3 cut(s)	197, 802, 984
HphI	GGTGA	1 cut(s)	638
Hpy166II	GTNNAC	3 cut(s)	453, 763, 1336
Hpy188I	TCNGA	9 cut(s)	104, 140, 205, 334, 368, 432, 478, 489, 680
Hpy8I	GTNNAC	3 cut(s)	453, 763, 1336
Hpy99I	CGWCG	8 cut(s)	170, 185, 238, 377, 380, 425, 428, 801
HpyAV	CCTTC	5 cut(s)	28, 287, 904, 1172, 1292
HpyCH4III	ACNGT	3 cut(s)	949, 1221, 1349
HpyCH4IV	ACGT	1 cut(s)	796
HpyCH4V	TGCA	9 cut(s)	731, 740, 763, 976, 1000, 1010, 1181, 1274, 1361
HpyF3I	CTNAG	7 cut(s)	429, 631, 864, 993, 1127, 1194, 1230
HpySE526I	ACGT	1 cut(s)	796
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	3 cut(s)	718, 892, 1150
KflI	GGGWCCC	1 cut(s)	1057
KroI	GCCGGC	2 cut(s)	801, 983
KroNI	GCCGGC	2 cut(s)	803, 985
Ksp22I	TGATCA	1 cut(s)	285
Kzo9I	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
LmnI	GCTCC	5 cut(s)	69, 105, 141, 369, 643
Lsp1109I	GCAGC	2 cut(s)	225, 1165
LweI	GCATC	3 cut(s)	718, 1093, 1251
MaeI	CTAG	4 cut(s)	147, 851, 1017, 1145
MaeII	ACGT	1 cut(s)	796
MaeIII	GTNAC	1 cut(s)	626
MalI	GATC	9 cut(s)	158, 267, 287, 407, 491, 515, 672, 936, 1095
MboI	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
MboII	GAAGA	5 cut(s)	229, 232, 341, 545, 1129
MfeI	CAATTG	1 cut(s)	1080
MflI	RGATCY	2 cut(s)	513, 1093
MhlI	GDGCHC	5 cut(s)	648, 765, 1231, 1256, 1313
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	4 cut(s)	141, 358, 707, 1080
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	5 cut(s)	209, 313, 363, 458, 468
MmeI	TCCRAC	5 cut(s)	127, 183, 391, 501, 769
Mox20I	TGGCCA	1 cut(s)	416
MroNI	GCCGGC	2 cut(s)	801, 983
MroXI	GAANNNNTTC	2 cut(s)	276, 1386
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	1 cut(s)	651
MslI	CAYNNNNRTG	1 cut(s)	1259
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	2 cut(s)	1064, 1368
MspI	CCGG	3 cut(s)	197, 802, 984
MspR9I	CCNGG	5 cut(s)	547, 570, 1140, 1314, 1331
MunI	CAATTG	1 cut(s)	1080
Mva1269I	GAATGC	1 cut(s)	740
MvaI	CCWGG	5 cut(s)	547, 570, 1140, 1314, 1331
MvnI	CGCG	1 cut(s)	702
NaeI	GCCGGC	2 cut(s)	803, 985
NcoI	CCATGG	2 cut(s)	9, 1111
NdeII	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
NgoMIV	GCCGGC	2 cut(s)	801, 983
NlaIV	GGNNCC	9 cut(s)	137, 402, 645, 755, 1058, 1059, 1137, 1255, 1356
NmeAIII	GCCGAG	2 cut(s)	238, 267
NmuCI	GTSAC	1 cut(s)	626
NspI	RCATGY	2 cut(s)	776, 1010
NspV	TTCGAA	1 cut(s)	1215
PaeI	GCATGC	2 cut(s)	776, 1010
PagI	TCATGA	1 cut(s)	321
PcsI	WCGNNNNNNNCGW	2 cut(s)	189, 474
PctI	GAATGC	1 cut(s)	740
PdiI	GCCGGC	2 cut(s)	803, 985
PdmI	GAANNNNTTC	2 cut(s)	276, 1386
PfeI	GAWTC	5 cut(s)	246, 261, 329, 473, 1302
PflMI	CCANNNNNTGG	1 cut(s)	552
PkrI	GCNGC	3 cut(s)	232, 240, 1180
Ple19I	CGATCG	1 cut(s)	408
PleI	GAGTC	5 cut(s)	208, 312, 363, 457, 467
PpsI	GAGTC	5 cut(s)	208, 312, 363, 457, 467
PpuMI	RGGWCCY	1 cut(s)	1057
PshAI	GACNNNNGTC	1 cut(s)	458
Psp5II	RGGWCCY	1 cut(s)	1057
Psp6I	CCWGG	5 cut(s)	545, 568, 1138, 1312, 1329
PspFI	CCCAGC	1 cut(s)	1060
PspGI	CCWGG	5 cut(s)	545, 568, 1138, 1312, 1329
PspN4I	GGNNCC	9 cut(s)	137, 402, 645, 755, 1058, 1059, 1137, 1255, 1356
PspPI	GGNCC	3 cut(s)	986, 1057, 1072
PspPPI	RGGWCCY	1 cut(s)	1057
PstI	CTGCAG	1 cut(s)	1363
PstNI	CAGNNNCTG	1 cut(s)	1391
PsuI	RGATCY	2 cut(s)	513, 1093
PvuI	CGATCG	1 cut(s)	408
PvuII	CAGCTG	1 cut(s)	1064
RsaI	GTAC	2 cut(s)	656, 1125
RsaNI	GTAC	2 cut(s)	655, 1124
RseI	CAYNNNNRTG	1 cut(s)	1259
SalI	GTCGAC	1 cut(s)	451
SaqAI	TTAA	1 cut(s)	651
SatI	GCNGC	3 cut(s)	231, 239, 1179
Sau3AI	GATC	9 cut(s)	156, 265, 285, 405, 489, 513, 670, 934, 1093
Sau96I	GGNCC	3 cut(s)	986, 1057, 1072
ScaI	AGTACT	1 cut(s)	1125
SchI	GAGTC	5 cut(s)	209, 313, 363, 458, 468
ScrFI	CCNGG	5 cut(s)	547, 570, 1140, 1314, 1331
SduI	GDGCHC	5 cut(s)	648, 765, 1231, 1256, 1313
SfaNI	GCATC	3 cut(s)	718, 1093, 1251
SfcI	CTRYAG	2 cut(s)	690, 1359
SfuI	TTCGAA	1 cut(s)	1215
SinI	GGWCC	1 cut(s)	1057
SmiMI	CAYNNNNRTG	1 cut(s)	1259
SmlI	CTYRAG	3 cut(s)	89, 809, 917
SmoI	CTYRAG	3 cut(s)	89, 809, 917
SphI	GCATGC	2 cut(s)	776, 1010
Sse9I	AATT	4 cut(s)	141, 358, 707, 1080
SsiI	CCGC	9 cut(s)	127, 150, 171, 230, 564, 700, 751, 1028, 1368
SspMI	CTAG	4 cut(s)	147, 851, 1017, 1145
StyD4I	CCNGG	5 cut(s)	545, 568, 1138, 1312, 1329
StyI	CCWWGG	2 cut(s)	9, 1111
TaaI	ACNGT	3 cut(s)	949, 1221, 1349
TaiI	ACGT	1 cut(s)	799
TaqI	TCGA	8 cut(s)	159, 183, 264, 302, 372, 420, 452, 1215
TasI	AATT	4 cut(s)	141, 358, 707, 1080
TatI	WGTACW	2 cut(s)	654, 1123
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	5 cut(s)	246, 261, 329, 473, 1302
Tru1I	TTAA	1 cut(s)	651
Tru9I	TTAA	1 cut(s)	651
TscAI	CASTG	1 cut(s)	1007
TseFI	GTSAC	1 cut(s)	626
TseI	GCWGC	2 cut(s)	238, 1178
Tsp45I	GTSAC	1 cut(s)	626
TspRI	CASTG	1 cut(s)	1007
Van91I	CCANNNNNTGG	1 cut(s)	552
VneI	GTGCAC	1 cut(s)	761
VpaK11BI	GGWCC	1 cut(s)	1057
XagI	CCTNNNNNAGG	1 cut(s)	1296
XapI	RAATTY	2 cut(s)	141, 707
XceI	RCATGY	2 cut(s)	776, 1010
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	2 cut(s)	276, 1386
XspI	CTAG	4 cut(s)	147, 851, 1017, 1145
ZrmI	AGTACT	1 cut(s)	1125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.