AT4G24730

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0012506
Physical Location & Seq
Reverse (-)
12752521 .. 12754306
1786 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G24730.2

Sequence Viewer

Length: 936 bp
ATGGGTTCTGCAGCCAGACAGCCTCTCTTCTCATTTGGTGTTATTGCTGATGTTCAGTATGCTGATATTTCTGATGGCCGCTCTTTTTTAGGTGTTCCTAGGTATTACAGAAACAGCATCCTTGTCCTTCAAAGAGCTGTTGAAACTTGGAACCAACATGGTAACCTCAAATTTGTTATTAACATGGGTGACATTGTTGATGGCTTTTGTCCCAAAGATCAATCCTTGGCTGCCACTAAGAAACTAGTCCATGAATTCGAGAAATTCAACGGTCCTGTGTATCATATGATTGGTAATCACTGCCTCTACAATCTCCCCCGCGAAGAGTTGCTTCCGTTGCTGAAGATCCCAGGTCGTGATGGCAATGCTTATTATGATTTCTCACCAACCCCGGAGTATAGAGTTGTGGTGTTAGATGGTTATGACATCAGTGCTGTTGGATGGCCTCAGGAACATCCTAATACTATCGCTGCATTGAAAATACTTGAAGAAAAGAACCCAAACACAGACAAAAACAGCCCCGCAGGGCTTGAGGATGTTGCAAGGAGATTTGTGAAGTATAATGGTGGTGTTGGGGAGAAACAGCTGCAATGGCTAGACAGTGTTCTTCAGGATGCATCGAATTCAAACCAGAGAGTTATCGTATGTGGGCATGTGCCTATGAGCCCTGGTGTGGCATCCAAAGCAGCTTTGTTATGGAATTTTGATGAAGTGATGAACATTATACACAAGTATGACTCTGTTAAAGTTTGTTTGTCCGGACATGATCATAAAGGAGGATACTTTGTTGATTCTCATGGGGTTCACCATAGATCCTTGGAAGCTGCCTTGGAGTGTCCCCCAGGTACGTATTCGTTTGGATATATCGATGTATATGATAACAAGCTGTCTCTTGTTGGTACTGATCGGATGCAAAGCACCGATTTTGAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00564 map00230 map00564
Pfam Domains
Protein Families
Metallophos

Protein Analysis

311

Amino Acids

34.74

Weight (kDa)

5.82

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 12 - 258 6.7e-14 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012506)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24730 AT4G24730
fragaria_vesca FvH4_5g06420 FvH4_5g06420 FvH4_5g06420 FvH4_5g06420 FvH4_5g06420 FvH4_5g06420
malus_domestica MD14G1170200.v1.1
prunus_persica Prupe.5G164400_v2.0.a1
pyrus_communis pycom14g14210
rosa_chinensis RchiOBHm_Chr7g0192361
rosa_laevigata RLG00000004376
rosa_roxburghii Rroxscaffold_3G00263100
rosa_rugosa Rorug07G0000800
rosa_samantha Rh7BG126900 Rh7CG128500 Rh7DG128600
rosa_wichuraiana Rw7G010720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 81
AccII CGCG 1 cut(s) 321
AccIII TCCGGA 1 cut(s) 758
AciI CCGC 3 cut(s) 79, 319, 522
AclWI GGATC 2 cut(s) 340, 807
AcoI YGGCCR 1 cut(s) 76
AcsI RAATTY 5 cut(s) 170, 254, 263, 622, 700
AcuI CTGAAG 2 cut(s) 362, 593
AfaI GTAC 2 cut(s) 847, 901
AfiI CCNNNNNNNGG 1 cut(s) 673
AgsI TTSAA 6 cut(s) 131, 143, 268, 478, 488, 627
AhlI ACTAGT 1 cut(s) 244
AjnI CCWGG 3 cut(s) 349, 667, 841
AluBI AGCT 5 cut(s) 137, 586, 689, 824, 886
AluI AGCT 5 cut(s) 137, 586, 689, 824, 886
Alw26I GTCTC 1 cut(s) 894
AlwI GGATC 2 cut(s) 340, 807
Aor13HI TCCGGA 1 cut(s) 758
AoxI GGCC 2 cut(s) 76, 443
ApeKI GCWGC 6 cut(s) 11, 230, 470, 586, 686, 824
ApoI RAATTY 5 cut(s) 170, 254, 263, 622, 700
AspA2I CCTAGG 1 cut(s) 98
AspS9I GGNCC 1 cut(s) 272
AsuC2I CCSGG 1 cut(s) 392
AsuHPI GGTGA 3 cut(s) 200, 375, 797
AvaII GGWCC 1 cut(s) 272
AvrII CCTAGG 1 cut(s) 98
AxyI CCTNAGG 1 cut(s) 447
BanII GRGCYC 1 cut(s) 668
BbvI GCAGC 6 cut(s) 23, 217, 457, 573, 698, 811
BccI CCATC 5 cut(s) 68, 194, 353, 410, 435
BciT130I CCWGG 3 cut(s) 351, 669, 843
BciVI GTATCC 1 cut(s) 773
BclI TGATCA 1 cut(s) 766
BcnI CCSGG 1 cut(s) 392
BcoDI GTCTC 1 cut(s) 894
BcuI ACTAGT 1 cut(s) 244
BfaI CTAG 4 cut(s) 99, 245, 596, 934
BfmI CTRYAG 1 cut(s) 9
BfuI GTATCC 1 cut(s) 773
BisI GCNGC 7 cut(s) 12, 79, 231, 471, 587, 687, 825
BlnI CCTAGG 1 cut(s) 98
BlsI GCNGC 7 cut(s) 13, 80, 232, 472, 588, 688, 826
Bme1390I CCNGG 4 cut(s) 351, 392, 669, 843
Bme18I GGWCC 1 cut(s) 272
BmgT120I GGNCC 1 cut(s) 272
BmiI GGNNCC 1 cut(s) 152
BmrFI CCNGG 4 cut(s) 351, 392, 669, 843
BmsI GCATC 5 cut(s) 126, 604, 626, 686, 900
BpuEI CTTGAG 1 cut(s) 551
BpuMI CCSGG 1 cut(s) 392
Bsa29I ATCGAT 1 cut(s) 867
BsaAI YACGTR 1 cut(s) 849
BsaJI CCNNGG 8 cut(s) 98, 225, 349, 390, 667, 816, 828, 841
BsaWI WCCGGW 1 cut(s) 758
Bsc4I CCNNNNNNNGG 1 cut(s) 673
Bse21I CCTNAGG 1 cut(s) 447
Bse3DI GCAATG 2 cut(s) 370, 596
BseAI TCCGGA 1 cut(s) 758
BseBI CCWGG 3 cut(s) 351, 669, 843
BseCI ATCGAT 1 cut(s) 867
BseDI CCNNGG 8 cut(s) 98, 225, 349, 390, 667, 816, 828, 841
BseGI GGATG 7 cut(s) 117, 446, 454, 541, 619, 677, 915
BseLI CCNNNNNNNGG 1 cut(s) 673
BseMI GCAATG 2 cut(s) 370, 596
BseMII CTCAG 1 cut(s) 461
BseXI GCAGC 6 cut(s) 23, 217, 457, 573, 698, 811
Bsh1236I CGCG 1 cut(s) 321
BshFI GGCC 2 cut(s) 78, 445
BshVI ATCGAT 1 cut(s) 867
BsiSI CCGG 2 cut(s) 392, 759
BslFI GGGAC 2 cut(s) 195, 822
BslI CCNNNNNNNGG 1 cut(s) 673
BsmAI GTCTC 1 cut(s) 894
BsmFI GGGAC 2 cut(s) 195, 822
BsnI GGCC 2 cut(s) 78, 445
Bsp1286I GDGCHC 1 cut(s) 668
Bsp13I TCCGGA 1 cut(s) 758
Bsp143I GATC 5 cut(s) 217, 345, 766, 812, 904
BspACI CCGC 3 cut(s) 79, 319, 522
BspANI GGCC 2 cut(s) 78, 445
BspCNI CTCAG 1 cut(s) 460
BspDI ATCGAT 1 cut(s) 867
BspEI TCCGGA 1 cut(s) 758
BspFNI CGCG 1 cut(s) 321
BspLI GGNNCC 1 cut(s) 152
BspMAI CTGCAG 1 cut(s) 13
BspPI GGATC 2 cut(s) 340, 807
BsrBI CCGCTC 1 cut(s) 81
BsrDI GCAATG 2 cut(s) 370, 596
BssECI CCNNGG 8 cut(s) 98, 225, 349, 390, 667, 816, 828, 841
BssMI GATC 5 cut(s) 217, 345, 766, 812, 904
BssT1I CCWWGG 4 cut(s) 98, 225, 816, 828
Bst2UI CCWGG 3 cut(s) 351, 669, 843
Bst4CI ACNGT 2 cut(s) 272, 602
Bst6I CTCTTC 2 cut(s) 32, 318
BstBAI YACGTR 1 cut(s) 849
BstDEI CTNAG 2 cut(s) 237, 447
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 7 cut(s) 117, 446, 454, 541, 619, 677, 915
BstFNI CGCG 1 cut(s) 321
BstKTI GATC 5 cut(s) 220, 348, 769, 815, 907
BstMAI GTCTC 1 cut(s) 894
BstMBI GATC 5 cut(s) 217, 345, 766, 812, 904
BstMWI GCNNNNNNNGC 3 cut(s) 337, 592, 683
BstNI CCWGG 3 cut(s) 351, 669, 843
BstNSI RCATGY 1 cut(s) 656
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 4 cut(s) 349, 390, 667, 841
BstSFI CTRYAG 1 cut(s) 9
BstSNI TACGTA 1 cut(s) 849
BstUI CGCG 1 cut(s) 321
BstV1I GCAGC 6 cut(s) 23, 217, 457, 573, 698, 811
BstX2I RGATCY 2 cut(s) 345, 812
BstYI RGATCY 2 cut(s) 345, 812
Bsu15I ATCGAT 1 cut(s) 867
Bsu36I CCTNAGG 1 cut(s) 447
BsuI GTATCC 1 cut(s) 773
BsuRI GGCC 2 cut(s) 78, 445
BsuTUI ATCGAT 1 cut(s) 867
BtsCI GGATG 7 cut(s) 117, 446, 454, 541, 619, 677, 915
BtsI GCAGTG 1 cut(s) 298
BtsIMutI CAGTG 3 cut(s) 298, 436, 607
Cfr13I GGNCC 1 cut(s) 272
ClaI ATCGAT 1 cut(s) 867
Csp6I GTAC 2 cut(s) 846, 900
CviAII CATG 6 cut(s) 158, 184, 251, 653, 764, 797
CviQI GTAC 2 cut(s) 846, 900
DdeI CTNAG 2 cut(s) 237, 447
DpnI GATC 5 cut(s) 219, 347, 768, 814, 906
DpnII GATC 5 cut(s) 217, 345, 766, 812, 904
EaeI YGGCCR 1 cut(s) 76
Eam1104I CTCTTC 2 cut(s) 32, 318
EarI CTCTTC 2 cut(s) 32, 318
Eco105I TACGTA 1 cut(s) 849
Eco130I CCWWGG 4 cut(s) 98, 225, 816, 828
Eco24I GRGCYC 1 cut(s) 668
Eco47I GGWCC 1 cut(s) 272
Eco57I CTGAAG 2 cut(s) 362, 593
Eco81I CCTNAGG 1 cut(s) 447
Eco91I GGTNACC 1 cut(s) 161
EcoO65I GGTNACC 1 cut(s) 161
EcoRI GAATTC 2 cut(s) 254, 622
EcoRII CCWGG 3 cut(s) 349, 667, 841
EcoT14I CCWWGG 4 cut(s) 98, 225, 816, 828
EcoT22I ATGCAT 1 cut(s) 619
EcoT38I GRGCYC 1 cut(s) 668
ErhI CCWWGG 4 cut(s) 98, 225, 816, 828
FaeI CATG 6 cut(s) 161, 187, 254, 656, 767, 800
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 2 cut(s) 195, 822
FatI CATG 6 cut(s) 157, 183, 250, 652, 763, 796
FauI CCCGC 2 cut(s) 326, 529
FauNDI CATATG 1 cut(s) 285
FbaI TGATCA 1 cut(s) 766
Fnu4HI GCNGC 7 cut(s) 12, 79, 231, 471, 587, 687, 825
FokI GGATG 7 cut(s) 104, 441, 453, 548, 626, 664, 922
FriOI GRGCYC 1 cut(s) 668
Fsp4HI GCNGC 7 cut(s) 12, 79, 231, 471, 587, 687, 825
FspBI CTAG 4 cut(s) 99, 245, 596, 934
GluI GCNGC 7 cut(s) 12, 79, 231, 471, 587, 687, 825
HaeIII GGCC 2 cut(s) 78, 445
HapII CCGG 2 cut(s) 392, 759
Hin1II CATG 6 cut(s) 161, 187, 254, 656, 767, 800
HinfI GANTC 2 cut(s) 737, 791
HpaII CCGG 2 cut(s) 392, 759
HphI GGTGA 3 cut(s) 200, 375, 797
Hpy166II GTNNAC 1 cut(s) 805
Hpy188I TCNGA 2 cut(s) 73, 909
Hpy188III TCNNGA 5 cut(s) 259, 356, 449, 611, 759
Hpy8I GTNNAC 1 cut(s) 805
HpyAV CCTTC 1 cut(s) 137
HpyCH4III ACNGT 2 cut(s) 272, 602
HpyCH4IV ACGT 1 cut(s) 848
HpyCH4V TGCA 6 cut(s) 11, 473, 542, 589, 617, 913
HpyF10VI GCNNNNNNNGC 3 cut(s) 337, 592, 683
HpyF3I CTNAG 2 cut(s) 237, 447
HpySE526I ACGT 1 cut(s) 848
Hsp92II CATG 6 cut(s) 161, 187, 254, 656, 767, 800
Kpn2I TCCGGA 1 cut(s) 758
Ksp22I TGATCA 1 cut(s) 766
Kzo9I GATC 5 cut(s) 217, 345, 766, 812, 904
Lsp1109I GCAGC 6 cut(s) 23, 217, 457, 573, 698, 811
LweI GCATC 5 cut(s) 126, 604, 626, 686, 900
MaeI CTAG 4 cut(s) 99, 245, 596, 934
MaeII ACGT 1 cut(s) 848
MaeIII GTNAC 2 cut(s) 161, 188
MalI GATC 5 cut(s) 219, 347, 768, 814, 906
MbiI CCGCTC 1 cut(s) 81
MboI GATC 5 cut(s) 217, 345, 766, 812, 904
MboII GAAGA 5 cut(s) 19, 335, 355, 500, 599
MflI RGATCY 2 cut(s) 345, 812
MhlI GDGCHC 1 cut(s) 668
MluCI AATT 5 cut(s) 170, 254, 263, 622, 700
MlyI GAGTC 1 cut(s) 731
MmeI TCCRAC 1 cut(s) 418
MnlI CCTC 6 cut(s) 33, 176, 314, 456, 526, 770
Mph1103I ATGCAT 1 cut(s) 619
MroI TCCGGA 1 cut(s) 758
MseI TTAA 2 cut(s) 180, 744
MslI CAYNNNNRTG 1 cut(s) 732
MspA1I CMGCKG 1 cut(s) 586
MspI CCGG 2 cut(s) 392, 759
MspR9I CCNGG 4 cut(s) 351, 392, 669, 843
MvaI CCWGG 3 cut(s) 351, 669, 843
MvnI CGCG 1 cut(s) 321
MwoI GCNNNNNNNGC 3 cut(s) 337, 592, 683
NciI CCSGG 1 cut(s) 392
NdeI CATATG 1 cut(s) 285
NdeII GATC 5 cut(s) 217, 345, 766, 812, 904
NlaIII CATG 6 cut(s) 161, 187, 254, 656, 767, 800
NlaIV GGNNCC 1 cut(s) 152
NmuCI GTSAC 1 cut(s) 188
NsiI ATGCAT 1 cut(s) 619
NspI RCATGY 1 cut(s) 656
PfeI GAWTC 1 cut(s) 791
PkrI GCNGC 7 cut(s) 13, 80, 232, 472, 588, 688, 826
PleI GAGTC 1 cut(s) 731
PpsI GAGTC 1 cut(s) 731
Ppu21I YACGTR 1 cut(s) 849
Psp6I CCWGG 3 cut(s) 349, 667, 841
PspEI GGTNACC 1 cut(s) 161
PspGI CCWGG 3 cut(s) 349, 667, 841
PspN4I GGNNCC 1 cut(s) 152
PspPI GGNCC 1 cut(s) 272
PstI CTGCAG 1 cut(s) 13
PsuI RGATCY 2 cut(s) 345, 812
PvuII CAGCTG 1 cut(s) 586
RsaI GTAC 2 cut(s) 847, 901
RsaNI GTAC 2 cut(s) 846, 900
RseI CAYNNNNRTG 1 cut(s) 732
SaqAI TTAA 2 cut(s) 180, 744
SatI GCNGC 7 cut(s) 12, 79, 231, 471, 587, 687, 825
Sau3AI GATC 5 cut(s) 217, 345, 766, 812, 904
Sau96I GGNCC 1 cut(s) 272
SchI GAGTC 1 cut(s) 731
ScrFI CCNGG 4 cut(s) 351, 392, 669, 843
SduI GDGCHC 1 cut(s) 668
SfaNI GCATC 5 cut(s) 126, 604, 626, 686, 900
SfcI CTRYAG 1 cut(s) 9
SinI GGWCC 1 cut(s) 272
SmiMI CAYNNNNRTG 1 cut(s) 732
SmlI CTYRAG 1 cut(s) 530
SmoI CTYRAG 1 cut(s) 530
SnaBI TACGTA 1 cut(s) 849
SpeI ACTAGT 1 cut(s) 244
Sse9I AATT 5 cut(s) 170, 254, 263, 622, 700
SsiI CCGC 3 cut(s) 79, 319, 522
SspMI CTAG 4 cut(s) 99, 245, 596, 934
StyD4I CCNGG 4 cut(s) 349, 390, 667, 841
StyI CCWWGG 4 cut(s) 98, 225, 816, 828
TaaI ACNGT 2 cut(s) 272, 602
TaiI ACGT 1 cut(s) 851
TaqI TCGA 3 cut(s) 258, 620, 867
TasI AATT 5 cut(s) 170, 254, 263, 622, 700
TauI GCSGC 1 cut(s) 81
TfiI GAWTC 1 cut(s) 791
Tru1I TTAA 2 cut(s) 180, 744
Tru9I TTAA 2 cut(s) 180, 744
TscAI CASTG 3 cut(s) 305, 436, 607
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 6 cut(s) 11, 230, 470, 586, 686, 824
Tsp45I GTSAC 1 cut(s) 188
TspDTI ATGAA 3 cut(s) 267, 723, 731
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 3 cut(s) 305, 436, 607
VpaK11BI GGWCC 1 cut(s) 272
XapI RAATTY 5 cut(s) 170, 254, 263, 622, 700
XceI RCATGY 1 cut(s) 656
XmaJI CCTAGG 1 cut(s) 98
XspI CTAG 4 cut(s) 99, 245, 596, 934
Zsp2I ATGCAT 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.